RchiOBHm_Chr6g0299001

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
60235909 .. 60237195
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26845

Sequence Viewer

Length: 825 bp
ATGGTTTCCTCATCATCAAGCTCTAGATTGTTTCTTTCATTGATAGAACTTGTGTTGCTCGTAGGTCAAGCCCTTGATCAACCATATTTCCTATACAACTTATGTATAAACGAGACGGGTAACTATACCGCTGGTAACGGTAACGGCTACAGCTTTTACAACTCCAACTCCTCCTTTGGAGAAAACTCAGACAAAGTTTATGCACTCGGCCTTTGTAGAGGAGACGTTGAGGCCAACGACTGCGGCAGTTGCCTCAGCGACGCCAGATATTGTCTCACGGCGGCCTGTCCTGTTCAGAAGGAGTCCATTGGGTGGGGTGAACCTAAAAATTGTTCTTTTTTGCGTACGTGGAACCTACAGAACGTGTCGTCAACACTAGTGGAGGAGTTCAACCAAAAGCTTCAGCCCTTGTTGGAAAGACTGTCTAGTCAAGTTGCTGAAGGAGGTATTGATCGTAAGTTCGTTGTAGGCTGGCAAAACACAAGCGCCGCCAATGTAACAATATATGGACTCGCACAGTGTACTCCAGATTTGTCAGCCCAAGAATGCACTGAATGCTTCCAAACAGCTTTAGCAAAGATCACAGTATGTTGTTTGGGGAAATTTGGTGGGAGAGTTATTAAACCCAGCTGTAACTTAAGGTATGAAATTTACTCATTTGTTAACATTGCAGCTGTGGCACCCACACCTTCGTCACCATTAGCAACACCGGCCTCTCCTCCTCCACTGCTGTCAGGTATATTCCCTATTCATAATTTCATACATCATTTATTTTGTCACCATATCTATGTCGCAATTCCTGATATATTGTTTACTTTCCTTTAA

Protein Analysis

274

Amino Acids

29.88

Weight (kDa)

5.51

Isoelectric Point (pI)

49.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 48 - 112 3.1e-11 Salt stress response/antifungal
Stress-antifung PF01657 125 - 217 3.4e-14 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 426
AccB1I GGYRCC 1 cut(s) 679
AccB7I CCANNNNNTGG 1 cut(s) 312
AciI CCGC 4 cut(s) 129, 243, 281, 489
AcsI RAATTY 2 cut(s) 602, 648
AcuI CTGAAG 2 cut(s) 386, 459
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 2 cut(s) 346, 523
AfiI CCNNNNNNNGG 1 cut(s) 312
AflII CTTAAG 1 cut(s) 637
AflIII ACRYGT 1 cut(s) 363
AgsI TTSAA 1 cut(s) 391
AhlI ACTAGT 1 cut(s) 376
AluBI AGCT 6 cut(s) 21, 153, 400, 569, 630, 674
AluI AGCT 6 cut(s) 21, 153, 400, 569, 630, 674
Alw26I GTCTC 3 cut(s) 107, 216, 278
AoxI GGCC 4 cut(s) 208, 231, 282, 711
ApeKI GCWGC 1 cut(s) 671
ApoI RAATTY 2 cut(s) 602, 648
AspLEI GCGC 1 cut(s) 488
AsuHPI GGTGA 3 cut(s) 329, 687, 770
BanI GGYRCC 1 cut(s) 679
BbvCI CCTCAGC 1 cut(s) 254
BbvI GCAGC 1 cut(s) 683
BceAI ACGGC 2 cut(s) 160, 294
BclI TGATCA 1 cut(s) 76
BcoDI GTCTC 3 cut(s) 107, 216, 278
BcuI ACTAGT 1 cut(s) 376
BfaI CTAG 3 cut(s) 24, 377, 426
BfmI CTRYAG 2 cut(s) 148, 356
BfoI RGCGCY 1 cut(s) 489
BfrI CTTAAG 1 cut(s) 637
BisI GCNGC 4 cut(s) 244, 282, 489, 672
BlsI GCNGC 4 cut(s) 245, 283, 490, 673
BmiI GGNNCC 2 cut(s) 353, 681
BpmI CTGGAG 1 cut(s) 510
Bpu10I CCTNAGC 1 cut(s) 254
BsaAI YACGTR 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 261
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 1 cut(s) 312
Bse118I RCCGGY 1 cut(s) 709
Bse3DI GCAATG 1 cut(s) 666
BseLI CCNNNNNNNGG 1 cut(s) 312
BseMI GCAATG 1 cut(s) 666
BseMII CTCAG 2 cut(s) 201, 268
BseRI GAGGAG 5 cut(s) 160, 234, 398, 708, 711
BseXI GCAGC 1 cut(s) 683
BseYI CCCAGC 1 cut(s) 626
BshFI GGCC 4 cut(s) 210, 233, 284, 713
BshNI GGYRCC 1 cut(s) 679
BsiSI CCGG 1 cut(s) 710
BsiWI CGTACG 1 cut(s) 344
BslI CCNNNNNNNGG 1 cut(s) 312
BsmAI GTCTC 3 cut(s) 107, 216, 278
BsmBI CGTCTC 2 cut(s) 107, 216
BsmI GAATGC 2 cut(s) 551, 560
BsnI GGCC 4 cut(s) 210, 233, 284, 713
Bsp143I GATC 3 cut(s) 76, 451, 579
BspACI CCGC 4 cut(s) 129, 243, 281, 489
BspANI GGCC 4 cut(s) 210, 233, 284, 713
BspCNI CTCAG 2 cut(s) 200, 267
BspLI GGNNCC 2 cut(s) 353, 681
BspT107I GGYRCC 1 cut(s) 679
BspTI CTTAAG 1 cut(s) 637
BsrDI GCAATG 1 cut(s) 666
BsrFI RCCGGY 1 cut(s) 709
BssAI RCCGGY 1 cut(s) 709
BssMI GATC 3 cut(s) 76, 451, 579
BssNI GRCGYC 1 cut(s) 261
Bst4CI ACNGT 4 cut(s) 140, 423, 519, 586
BstACI GRCGYC 1 cut(s) 261
BstAFI CTTAAG 1 cut(s) 637
BstAPI GCANNNNNTGC 1 cut(s) 555
BstBAI YACGTR 1 cut(s) 348
BstC8I GCNNGC 1 cut(s) 473
BstDEI CTNAG 2 cut(s) 187, 254
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 1 cut(s) 488
BstKTI GATC 3 cut(s) 79, 454, 582
BstMAI GTCTC 3 cut(s) 107, 216, 278
BstMBI GATC 3 cut(s) 76, 451, 579
BstMWI GCNNNNNNNGC 4 cut(s) 249, 555, 677, 710
BstSFI CTRYAG 2 cut(s) 148, 356
BstV1I GCAGC 1 cut(s) 683
BsuRI GGCC 4 cut(s) 210, 233, 284, 713
BtsI GCAGTG 1 cut(s) 725
BtsIMutI CAGTG 3 cut(s) 524, 549, 725
Cac8I GCNNGC 1 cut(s) 473
CfoI GCGC 1 cut(s) 488
Cfr10I RCCGGY 1 cut(s) 709
CseI GACGC 1 cut(s) 269
Csp6I GTAC 2 cut(s) 345, 522
CspCI CAANNNNNGTGG 2 cut(s) 360, 395
CviQI GTAC 2 cut(s) 345, 522
DdeI CTNAG 2 cut(s) 187, 254
DpnI GATC 3 cut(s) 78, 453, 581
DpnII GATC 3 cut(s) 76, 451, 579
DrdI GACNNNNNNGTC 1 cut(s) 426
DseDI GACNNNNNNGTC 1 cut(s) 426
Eco57I CTGAAG 2 cut(s) 386, 459
Esp3I CGTCTC 2 cut(s) 107, 216
FbaI TGATCA 1 cut(s) 76
Fnu4HI GCNGC 4 cut(s) 244, 282, 489, 672
Fsp4HI GCNGC 4 cut(s) 244, 282, 489, 672
FspBI CTAG 3 cut(s) 24, 377, 426
GlaI GCGC 1 cut(s) 487
GluI GCNGC 4 cut(s) 244, 282, 489, 672
GsaI CCCAGC 1 cut(s) 630
GsuI CTGGAG 1 cut(s) 510
HaeII RGCGCY 1 cut(s) 489
HaeIII GGCC 4 cut(s) 210, 233, 284, 713
HapII CCGG 1 cut(s) 710
HgaI GACGC 1 cut(s) 269
HhaI GCGC 1 cut(s) 488
Hin1I GRCGYC 1 cut(s) 261
Hin6I GCGC 1 cut(s) 486
HinP1I GCGC 1 cut(s) 486
HincII GTYRAC 2 cut(s) 372, 664
HindII GTYRAC 2 cut(s) 372, 664
HindIII AAGCTT 1 cut(s) 398
HinfI GANTC 2 cut(s) 302, 510
HpaI GTTAAC 1 cut(s) 664
HpaII CCGG 1 cut(s) 710
HphI GGTGA 3 cut(s) 329, 687, 770
Hpy166II GTNNAC 5 cut(s) 320, 372, 522, 664, 813
Hpy188I TCNGA 2 cut(s) 190, 297
Hpy188III TCNNGA 3 cut(s) 24, 527, 800
Hpy8I GTNNAC 5 cut(s) 320, 372, 522, 664, 813
Hpy99I CGWCG 1 cut(s) 263
HpyAV CCTTC 3 cut(s) 292, 434, 699
HpyCH4III ACNGT 4 cut(s) 140, 423, 519, 586
HpyCH4IV ACGT 3 cut(s) 225, 347, 363
HpyCH4V TGCA 3 cut(s) 203, 549, 671
HpyF10VI GCNNNNNNNGC 4 cut(s) 249, 555, 677, 710
HpyF3I CTNAG 2 cut(s) 187, 254
HpySE526I ACGT 3 cut(s) 225, 347, 363
Hsp92I GRCGYC 1 cut(s) 261
HspAI GCGC 1 cut(s) 486
Ksp22I TGATCA 1 cut(s) 76
KspAI GTTAAC 1 cut(s) 664
Kzo9I GATC 3 cut(s) 76, 451, 579
Lsp1109I GCAGC 1 cut(s) 683
MaeI CTAG 3 cut(s) 24, 377, 426
MaeII ACGT 3 cut(s) 225, 347, 363
MaeIII GTNAC 7 cut(s) 119, 134, 140, 496, 632, 693, 776
MalI GATC 3 cut(s) 78, 453, 581
MboI GATC 3 cut(s) 76, 451, 579
MluCI AATT 5 cut(s) 328, 602, 648, 754, 795
MlyI GAGTC 2 cut(s) 311, 504
MmeI TCCRAC 2 cut(s) 189, 393
MseI TTAA 4 cut(s) 621, 638, 663, 823
MslI CAYNNNNRTG 1 cut(s) 786
MspA1I CMGCKG 3 cut(s) 131, 630, 674
MspCI CTTAAG 1 cut(s) 637
MspI CCGG 1 cut(s) 710
Mva1269I GAATGC 2 cut(s) 551, 560
MwoI GCNNNNNNNGC 4 cut(s) 249, 555, 677, 710
NdeII GATC 3 cut(s) 76, 451, 579
NlaIV GGNNCC 2 cut(s) 353, 681
NmeAIII GCCGAG 1 cut(s) 186
NmuCI GTSAC 2 cut(s) 693, 776
PctI GAATGC 2 cut(s) 551, 560
Pfl23II CGTACG 1 cut(s) 344
PflMI CCANNNNNTGG 1 cut(s) 312
PkrI GCNGC 4 cut(s) 245, 283, 490, 673
PleI GAGTC 2 cut(s) 310, 504
PpsI GAGTC 2 cut(s) 310, 504
Ppu21I YACGTR 1 cut(s) 348
PspFI CCCAGC 1 cut(s) 626
PspLI CGTACG 1 cut(s) 344
PspN4I GGNNCC 2 cut(s) 353, 681
PvuII CAGCTG 2 cut(s) 630, 674
RsaI GTAC 2 cut(s) 346, 523
RsaNI GTAC 2 cut(s) 345, 522
RseI CAYNNNNRTG 1 cut(s) 786
SaqAI TTAA 4 cut(s) 621, 638, 663, 823
SatI GCNGC 4 cut(s) 244, 282, 489, 672
Sau3AI GATC 3 cut(s) 76, 451, 579
SchI GAGTC 2 cut(s) 311, 504
SfcI CTRYAG 2 cut(s) 148, 356
SmiMI CAYNNNNRTG 1 cut(s) 786
SmlI CTYRAG 1 cut(s) 637
SmoI CTYRAG 1 cut(s) 637
SpeI ACTAGT 1 cut(s) 376
Sse9I AATT 5 cut(s) 328, 602, 648, 754, 795
SsiI CCGC 4 cut(s) 129, 243, 281, 489
SspMI CTAG 3 cut(s) 24, 377, 426
TaaI ACNGT 4 cut(s) 140, 423, 519, 586
TaiI ACGT 3 cut(s) 228, 350, 366
TasI AATT 5 cut(s) 328, 602, 648, 754, 795
TatI WGTACW 1 cut(s) 521
TauI GCSGC 3 cut(s) 246, 284, 491
Tru1I TTAA 4 cut(s) 621, 638, 663, 823
Tru9I TTAA 4 cut(s) 621, 638, 663, 823
TscAI CASTG 3 cut(s) 524, 556, 732
TseFI GTSAC 2 cut(s) 693, 776
TseI GCWGC 1 cut(s) 671
Tsp45I GTSAC 2 cut(s) 693, 776
TspDTI ATGAA 4 cut(s) 27, 660, 740, 748
TspRI CASTG 3 cut(s) 524, 556, 732
Van91I CCANNNNNTGG 1 cut(s) 312
Vha464I CTTAAG 1 cut(s) 637
XapI RAATTY 2 cut(s) 602, 648
XbaI TCTAGA 1 cut(s) 23
XspI CTAG 3 cut(s) 24, 377, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.