Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

26663453 .. 26667699

Gene Structure 4247 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48799

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGTTACGCTACTCAAACCGATCCCTCTATGGCCTCATGGAGGATTCCCCTCTTTTCTATATCGTGAGTCCAAGAAATGTAGCATCATCGGAAGTGGAAGGGTTCTTTGAAGAGCTTTGGAAGCTAATCCAAAGATTGAGTAGTGAAGCTACAGCAGGTGGTTCACTTCGTAAGTTCGCAGTAAACAACACAACTACTTCAGATTTAAAGACAATATTTGCACAAGCGCAGTGCACGCCAGATTTGTCCAAGCAAGATTGCACTGATTGCTTGGTTGGTGCTTATGAAGACATCACAACCTACAGTTACGGGAAGGATAGGGCCAGAATTCTTAAACCAAGTTGTAACATTAGGTATGAGCCTGCTAGCTTCCTCGACCCTGCAAATGTGGCACCACTTCCATCATTGCCACCAATATCTCCGCCTTCACCATCAACCAATACTACAAATTCAGAAGTGCTATGTCTCGAGTTAGGGCTGCTACCACAGCATGGTAGATCTGGGTTCGAGATCGGGCAGCGCCTACCTTCTTACAGTGATTGGAGGAGCTTCAATGGCAGTACTGGGCAGCTTGCGGTGGTGCAAAGCTATGTTCGGGCCTCGTTTTGGTGGATGGGATTGCTAGTGGCGCCGGTGATATGGCCAGCGTTGGTATTGACACCGACGTCGATGGCTTGGCTGCTCGGATCCTTAATCCAGGGAGACTGCTGCCGTGCTCTCTGGTGGCTACGTTGGGTGGAGACGAAGCTGGGGCCGGCTGAAAGACAACGGCCATATCTGGGTGCCCGGCGGTGGGTGCCCAAATCAGATTGGGTCTTCAAGAGGTTGGGCTGGTGCGCCGAAGATGCAGATGAAAGTAGAAGTGCAGAATCCTTGCAATTTGACTTTGGCACCATCAGAGTTGTTACAGATGATTTTTCTGAAGCATATAAACTCGGACATGGAGGTTTTGGTTCTGTATACAGGGGTAAGCTTCCCAATGGGGAAGAGATAGCAGTGAAAAGGCTCTCTATGGATTCTGGACAAGGAGATTTAGAATTCAAAAATGAGGTCTTACTAGTGGCTAGGCTTCCACACAGAAATTTAGTTAGACTTCTCGGTTTCTGCTTGGAAGGAAATGAAAGGCTTCTTGTCTATGAGTATCTCCCTAACGCAAGTCTTGATAACATCATTTTTGATCCAATCAAGCGCGACCAACTGGATTGGGATAAACGTTATAAAATCATAGAAGACATTGCTCGAGGGCTACTTTACCTTCATGTTGATTCTCTCCTTAGGATTATTCATCGTGATCTCAAAGCTAGTAACATCTTAATAGATGCAGAAATGAACCCTAAAATTTCAGATTTTGGCATGGCAAGGTTGTTTGTGCATGATGAAACACAAGGCAATACTAATCGTATTGTGGGAACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

471

Amino Acids

53.13

Weight (kDa)

5.98

Isoelectric Point (pI)

47.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	32 - 120	5.1e-10	Salt stress response/antifungal
Pkinase	PF00069	308 - 471	1e-30	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	311 - 462	1.3e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1218
AarI	CACCTGC	1 cut(s)	146
AasI	GACNNNNNNGTC	1 cut(s)	664
AatII	GACGTC	1 cut(s)	668
Acc36I	ACCTGC	1 cut(s)	146
AccB1I	GGYRCC	5 cut(s)	391, 628, 782, 796, 890
AccB7I	CCANNNNNTGG	1 cut(s)	491
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	1 cut(s)	1191
AciI	CCGC	3 cut(s)	422, 575, 790
AclI	AACGTT	1 cut(s)	1213
AclWI	GGATC	4 cut(s)	15, 681, 694, 1172
AcoI	YGGCCR	2 cut(s)	641, 770
AcsI	RAATTY	5 cut(s)	327, 448, 1037, 1081, 1338
AcuI	CTGAAG	2 cut(s)	183, 942
AcyI	GRCGYC	2 cut(s)	629, 665
AfaI	GTAC	1 cut(s)	562
AfiI	CCNNNNNNNGG	6 cut(s)	40, 491, 606, 779, 792, 793
AgsI	TTSAA	4 cut(s)	110, 553, 820, 1042
AhlI	ACTAGT	1 cut(s)	1057
AjnI	CCWGG	1 cut(s)	696
Alw21I	GWGCWC	2 cut(s)	236, 718
Alw26I	GTCTC	3 cut(s)	470, 696, 734
Alw44I	GTGCAC	1 cut(s)	232
AlwI	GGATC	4 cut(s)	15, 681, 694, 1172
Ama87I	CYCGRG	2 cut(s)	467, 1239
AoxI	GGCC	6 cut(s)	31, 321, 597, 641, 752, 770
ApaLI	GTGCAC	1 cut(s)	232
ApeKI	GCWGC	5 cut(s)	478, 517, 568, 679, 708
ApoI	RAATTY	5 cut(s)	327, 448, 1037, 1081, 1338
ArsI	GACNNNNNNTTYG	2 cut(s)	1035, 1067
Asp700I	GAANNNNTTC	1 cut(s)	1125
AspLEI	GCGC	5 cut(s)	229, 522, 631, 839, 1191
AspS9I	GGNCC	3 cut(s)	321, 597, 752
AsuC2I	CCSGG	1 cut(s)	787
AsuHPI	GGTGA	2 cut(s)	420, 646
AsuNHI	GCTAGC	1 cut(s)	365
AvaI	CYCGRG	2 cut(s)	467, 1239
AxyI	CCTNAGG	1 cut(s)	1274
BaeGI	GKGCMC	3 cut(s)	236, 787, 801
BalI	TGGCCA	1 cut(s)	643
BamHI	GGATCC	1 cut(s)	686
BanI	GGYRCC	5 cut(s)	391, 628, 782, 796, 890
BbsI	GAAGAC	3 cut(s)	294, 808, 1236
Bbv12I	GWGCWC	2 cut(s)	236, 718
BbvI	GCAGC	5 cut(s)	465, 529, 580, 666, 695
BccI	CCATC	5 cut(s)	409, 439, 607, 664, 902
BceAI	ACGGC	2 cut(s)	696, 785
BciT130I	CCWGG	1 cut(s)	698
BcnI	CCSGG	1 cut(s)	787
BcoDI	GTCTC	3 cut(s)	470, 696, 734
BcuI	ACTAGT	1 cut(s)	1057
BfaI	CTAG	6 cut(s)	366, 623, 1058, 1065, 1302, 1414
BfmI	CTRYAG	2 cut(s)	150, 301
BfoI	RGCGCY	2 cut(s)	523, 632
BfuAI	ACCTGC	1 cut(s)	146
BglII	AGATCT	1 cut(s)	497
BisI	GCNGC	5 cut(s)	479, 518, 569, 680, 709
BlsI	GCNGC	5 cut(s)	480, 519, 570, 681, 710
BmcAI	AGTACT	1 cut(s)	562
Bme1390I	CCNGG	2 cut(s)	698, 787
BmeT110I	CYCGRG	2 cut(s)	467, 1239
BmgT120I	GGNCC	3 cut(s)	321, 597, 752
BmiI	GGNNCC	8 cut(s)	393, 630, 688, 753, 784, 798, 892, 1411
BmrFI	CCNGG	2 cut(s)	698, 787
BmrI	ACTGGG	1 cut(s)	573
BmsI	GCATC	3 cut(s)	92, 835, 1309
BmtI	GCTAGC	1 cut(s)	369
BmuI	ACTGGG	1 cut(s)	573
BpiI	GAAGAC	3 cut(s)	294, 808, 1236
BpuMI	CCSGG	1 cut(s)	787
BsaHI	GRCGYC	2 cut(s)	629, 665
BsaJI	CCNNGG	1 cut(s)	697
Bsc4I	CCNNNNNNNGG	6 cut(s)	40, 491, 606, 779, 792, 793
Bse118I	RCCGGY	2 cut(s)	631, 754
Bse1I	ACTGG	2 cut(s)	568, 1203
Bse21I	CCTNAGG	1 cut(s)	1274
Bse3DI	GCAATG	2 cut(s)	404, 1233
BseBI	CCWGG	1 cut(s)	698
BseDI	CCNNGG	1 cut(s)	697
BseGI	GGATG	1 cut(s)	618
BseLI	CCNNNNNNNGG	6 cut(s)	40, 491, 606, 779, 792, 793
BseMI	GCAATG	2 cut(s)	404, 1233
BseNI	ACTGG	2 cut(s)	568, 1203
BseRI	GAGGAG	1 cut(s)	559
BseSI	GKGCMC	3 cut(s)	236, 787, 801
BseXI	GCAGC	5 cut(s)	465, 529, 580, 666, 695
BseYI	CCCAGC	1 cut(s)	748
BsgI	GTGCAG	1 cut(s)	885
Bsh1236I	CGCG	1 cut(s)	1191
BshFI	GGCC	6 cut(s)	33, 323, 599, 643, 754, 772
BshNI	GGYRCC	5 cut(s)	391, 628, 782, 796, 890
BsiHKAI	GWGCWC	2 cut(s)	236, 718
BsiHKCI	CYCGRG	2 cut(s)	467, 1239
BsiSI	CCGG	3 cut(s)	632, 755, 787
BslI	CCNNNNNNNGG	6 cut(s)	40, 491, 606, 779, 792, 793
BsmAI	GTCTC	3 cut(s)	470, 696, 734
BsmBI	CGTCTC	1 cut(s)	734
BsnI	GGCC	6 cut(s)	33, 323, 599, 643, 754, 772
BsoBI	CYCGRG	2 cut(s)	467, 1239
Bsp1286I	GDGCHC	4 cut(s)	236, 718, 787, 801
Bsp143I	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
BspACI	CCGC	3 cut(s)	422, 575, 790
BspANI	GGCC	6 cut(s)	33, 323, 599, 643, 754, 772
BspFNI	CGCG	1 cut(s)	1191
BspLI	GGNNCC	8 cut(s)	393, 630, 688, 753, 784, 798, 892, 1411
BspMI	ACCTGC	1 cut(s)	146
BspOI	GCTAGC	1 cut(s)	369
BspPI	GGATC	4 cut(s)	15, 681, 694, 1172
BspQI	GCTCTTC	1 cut(s)	105
BspT107I	GGYRCC	5 cut(s)	391, 628, 782, 796, 890
BsrDI	GCAATG	2 cut(s)	404, 1233
BsrFI	RCCGGY	2 cut(s)	631, 754
BsrI	ACTGG	2 cut(s)	568, 1203
BssAI	RCCGGY	2 cut(s)	631, 754
BssECI	CCNNGG	1 cut(s)	697
BssMI	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
BssNAI	GTATAC	1 cut(s)	961
BssNI	GRCGYC	2 cut(s)	629, 665
Bst1107I	GTATAC	1 cut(s)	961
Bst2UI	CCWGG	1 cut(s)	698
Bst4CI	ACNGT	2 cut(s)	305, 536
Bst6I	CTCTTC	2 cut(s)	105, 981
BstACI	GRCGYC	2 cut(s)	629, 665
BstAPI	GCANNNNNTGC	1 cut(s)	267
BstC8I	GCNNGC	6 cut(s)	236, 363, 367, 573, 645, 756
BstDEI	CTNAG	1 cut(s)	1274
BstENI	CCTNNNNNAGG	1 cut(s)	38
BstF5I	GGATG	1 cut(s)	618
BstFNI	CGCG	1 cut(s)	1191
BstH2I	RGCGCY	2 cut(s)	523, 632
BstHHI	GCGC	5 cut(s)	229, 522, 631, 839, 1191
BstKTI	GATC	6 cut(s)	23, 500, 513, 689, 1180, 1294
BstMAI	GTCTC	3 cut(s)	470, 696, 734
BstMBI	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
BstMWI	GCNNNNNNNGC	9 cut(s)	121, 235, 267, 389, 487, 555, 628, 796, 845
BstNI	CCWGG	1 cut(s)	698
BstSCI	CCNGG	2 cut(s)	696, 785
BstSFI	CTRYAG	2 cut(s)	150, 301
BstSLI	GKGCMC	3 cut(s)	236, 787, 801
BstUI	CGCG	1 cut(s)	1191
BstV1I	GCAGC	5 cut(s)	465, 529, 580, 666, 695
BstV2I	GAAGAC	3 cut(s)	294, 808, 1236
BstX2I	RGATCY	2 cut(s)	497, 686
BstYI	RGATCY	2 cut(s)	497, 686
BstZ17I	GTATAC	1 cut(s)	961
Bsu36I	CCTNAGG	1 cut(s)	1274
BsuRI	GGCC	6 cut(s)	33, 323, 599, 643, 754, 772
BtsCI	GGATG	1 cut(s)	618
BtsI	GCAGTG	2 cut(s)	236, 1002
BtsIMutI	CAGTG	4 cut(s)	236, 261, 541, 1002
BveI	ACCTGC	1 cut(s)	146
Cac8I	GCNNGC	6 cut(s)	236, 363, 367, 573, 645, 756
CfoI	GCGC	5 cut(s)	229, 522, 631, 839, 1191
Cfr10I	RCCGGY	2 cut(s)	631, 754
Cfr13I	GGNCC	3 cut(s)	321, 597, 752
Csp6I	GTAC	1 cut(s)	561
CviAII	CATG	6 cut(s)	37, 491, 941, 1259, 1354, 1373
CviQI	GTAC	1 cut(s)	561
DdeI	CTNAG	1 cut(s)	1274
DinI	GGCGCC	1 cut(s)	630
DpnI	GATC	6 cut(s)	22, 499, 512, 688, 1179, 1293
DpnII	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
DraI	TTTAAA	1 cut(s)	207
DrdI	GACNNNNNNGTC	1 cut(s)	664
DseDI	GACNNNNNNGTC	1 cut(s)	664
EaeI	YGGCCR	2 cut(s)	641, 770
Eam1104I	CTCTTC	2 cut(s)	105, 981
EarI	CTCTTC	2 cut(s)	105, 981
EciI	GGCGGA	1 cut(s)	411
Eco57I	CTGAAG	2 cut(s)	183, 942
Eco81I	CCTNAGG	1 cut(s)	1274
Eco88I	CYCGRG	2 cut(s)	467, 1239
EcoNI	CCTNNNNNAGG	1 cut(s)	38
EcoRI	GAATTC	2 cut(s)	327, 1037
EcoRII	CCWGG	1 cut(s)	696
EgeI	GGCGCC	1 cut(s)	630
EheI	GGCGCC	1 cut(s)	630
Esp3I	CGTCTC	1 cut(s)	734
FaeI	CATG	6 cut(s)	40, 494, 944, 1262, 1357, 1376
FatI	CATG	6 cut(s)	36, 490, 940, 1258, 1353, 1372
FblI	GTMKAC	1 cut(s)	960
Fnu4HI	GCNGC	5 cut(s)	479, 518, 569, 680, 709
FokI	GGATG	1 cut(s)	625
Fsp4HI	GCNGC	5 cut(s)	479, 518, 569, 680, 709
FspBI	CTAG	6 cut(s)	366, 623, 1058, 1065, 1302, 1414
GlaI	GCGC	5 cut(s)	228, 521, 630, 838, 1190
GluI	GCNGC	5 cut(s)	479, 518, 569, 680, 709
GsaI	CCCAGC	1 cut(s)	752
HaeII	RGCGCY	2 cut(s)	523, 632
HaeIII	GGCC	6 cut(s)	33, 323, 599, 643, 754, 772
HapII	CCGG	3 cut(s)	632, 755, 787
HhaI	GCGC	5 cut(s)	229, 522, 631, 839, 1191
Hin1I	GRCGYC	2 cut(s)	629, 665
Hin1II	CATG	6 cut(s)	40, 494, 944, 1262, 1357, 1376
Hin6I	GCGC	5 cut(s)	227, 520, 629, 837, 1189
HinP1I	GCGC	5 cut(s)	227, 520, 629, 837, 1189
HindIII	AAGCTT	1 cut(s)	971
HinfI	GANTC	5 cut(s)	44, 67, 869, 1016, 1265
HpaII	CCGG	3 cut(s)	632, 755, 787
HphI	GGTGA	2 cut(s)	420, 646
Hpy166II	GTNNAC	4 cut(s)	164, 184, 234, 961
Hpy188I	TCNGA	9 cut(s)	91, 202, 454, 686, 808, 899, 922, 938, 1345
Hpy188III	TCNNGA	7 cut(s)	64, 467, 508, 820, 1020, 1160, 1289
Hpy8I	GTNNAC	4 cut(s)	164, 184, 234, 961
Hpy99I	CGWCG	2 cut(s)	667, 670
HpyAV	CCTTC	6 cut(s)	92, 307, 435, 537, 1106, 1265
HpyCH4III	ACNGT	2 cut(s)	305, 536
HpyCH4IV	ACGT	3 cut(s)	665, 730, 1213
HpyF10VI	GCNNNNNNNGC	9 cut(s)	121, 235, 267, 389, 487, 555, 628, 796, 845
HpyF3I	CTNAG	1 cut(s)	1274
HpySE526I	ACGT	3 cut(s)	665, 730, 1213
Hsp92I	GRCGYC	2 cut(s)	629, 665
Hsp92II	CATG	6 cut(s)	40, 494, 944, 1262, 1357, 1376
HspAI	GCGC	5 cut(s)	227, 520, 629, 837, 1189
KasI	GGCGCC	1 cut(s)	628
KroI	GCCGGC	1 cut(s)	754
KroNI	GCCGGC	1 cut(s)	756
Kzo9I	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
LguI	GCTCTTC	1 cut(s)	105
LmnI	GCTCC	1 cut(s)	546
Lsp1109I	GCAGC	5 cut(s)	465, 529, 580, 666, 695
LweI	GCATC	3 cut(s)	92, 835, 1309
MaeI	CTAG	6 cut(s)	366, 623, 1058, 1065, 1302, 1414
MaeII	ACGT	3 cut(s)	665, 730, 1213
MaeIII	GTNAC	5 cut(s)	3, 305, 344, 904, 1304
MalI	GATC	6 cut(s)	22, 499, 512, 688, 1179, 1293
MboI	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
MboII	GAAGA	6 cut(s)	122, 299, 808, 854, 998, 1241
MflI	RGATCY	2 cut(s)	497, 686
MhlI	GDGCHC	4 cut(s)	236, 718, 787, 801
MlsI	TGGCCA	1 cut(s)	643
MluCI	AATT	6 cut(s)	327, 448, 878, 1037, 1081, 1338
MluNI	TGGCCA	1 cut(s)	643
Mly113I	GGCGCC	1 cut(s)	629
MlyI	GAGTC	1 cut(s)	76
Mox20I	TGGCCA	1 cut(s)	643
MroNI	GCCGGC	1 cut(s)	754
MroXI	GAANNNNTTC	1 cut(s)	1125
MscI	TGGCCA	1 cut(s)	643
MseI	TTAA	4 cut(s)	206, 333, 692, 1313
Msp20I	TGGCCA	1 cut(s)	643
MspI	CCGG	3 cut(s)	632, 755, 787
MspR9I	CCNGG	2 cut(s)	698, 787
MvaI	CCWGG	1 cut(s)	698
MvnI	CGCG	1 cut(s)	1191
MwoI	GCNNNNNNNGC	9 cut(s)	121, 235, 267, 389, 487, 555, 628, 796, 845
NaeI	GCCGGC	1 cut(s)	756
NarI	GGCGCC	1 cut(s)	629
NciI	CCSGG	1 cut(s)	787
NdeII	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
NgoMIV	GCCGGC	1 cut(s)	754
NheI	GCTAGC	1 cut(s)	365
NlaIII	CATG	6 cut(s)	40, 494, 944, 1262, 1357, 1376
NlaIV	GGNNCC	8 cut(s)	393, 630, 688, 753, 784, 798, 892, 1411
PaeR7I	CTCGAG	2 cut(s)	467, 1239
PaqCI	CACCTGC	1 cut(s)	146
PciSI	GCTCTTC	1 cut(s)	105
PdiI	GCCGGC	1 cut(s)	756
PdmI	GAANNNNTTC	1 cut(s)	1125
PfeI	GAWTC	4 cut(s)	44, 869, 1016, 1265
PflMI	CCANNNNNTGG	1 cut(s)	491
PkrI	GCNGC	5 cut(s)	480, 519, 570, 681, 710
PleI	GAGTC	1 cut(s)	75
PluTI	GGCGCC	1 cut(s)	632
PpsI	GAGTC	1 cut(s)	75
PsiI	TTATAA	1 cut(s)	1218
Psp1406I	AACGTT	1 cut(s)	1213
Psp6I	CCWGG	1 cut(s)	696
PspFI	CCCAGC	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	696
PspN4I	GGNNCC	8 cut(s)	393, 630, 688, 753, 784, 798, 892, 1411
PspPI	GGNCC	3 cut(s)	321, 597, 752
PspXI	VCTCGAGB	1 cut(s)	1239
PsuI	RGATCY	2 cut(s)	497, 686
RsaI	GTAC	1 cut(s)	562
RsaNI	GTAC	1 cut(s)	561
SapI	GCTCTTC	1 cut(s)	105
SaqAI	TTAA	4 cut(s)	206, 333, 692, 1313
SatI	GCNGC	5 cut(s)	479, 518, 569, 680, 709
Sau3AI	GATC	6 cut(s)	20, 497, 510, 686, 1177, 1291
Sau96I	GGNCC	3 cut(s)	321, 597, 752
ScaI	AGTACT	1 cut(s)	562
SchI	GAGTC	1 cut(s)	76
ScrFI	CCNGG	2 cut(s)	698, 787
SduI	GDGCHC	4 cut(s)	236, 718, 787, 801
SfaNI	GCATC	3 cut(s)	92, 835, 1309
SfcI	CTRYAG	2 cut(s)	150, 301
SfoI	GGCGCC	1 cut(s)	630
Sfr274I	CTCGAG	2 cut(s)	467, 1239
SgrAI	CRCCGGYG	1 cut(s)	631
SlaI	CTCGAG	2 cut(s)	467, 1239
SmlI	CTYRAG	2 cut(s)	467, 1239
SmoI	CTYRAG	2 cut(s)	467, 1239
SpeI	ACTAGT	1 cut(s)	1057
Sse9I	AATT	6 cut(s)	327, 448, 878, 1037, 1081, 1338
SsiI	CCGC	3 cut(s)	422, 575, 790
SspDI	GGCGCC	1 cut(s)	628
SspI	AATATT	1 cut(s)	216
SspMI	CTAG	6 cut(s)	366, 623, 1058, 1065, 1302, 1414
StyD4I	CCNGG	2 cut(s)	696, 785
TaaI	ACNGT	2 cut(s)	305, 536
TaiI	ACGT	3 cut(s)	668, 733, 1216
TaqI	TCGA	5 cut(s)	375, 468, 507, 668, 1240
TasI	AATT	6 cut(s)	327, 448, 878, 1037, 1081, 1338
TatI	WGTACW	1 cut(s)	560
TfiI	GAWTC	4 cut(s)	44, 869, 1016, 1265
Tru1I	TTAA	4 cut(s)	206, 333, 692, 1313
Tru9I	TTAA	4 cut(s)	206, 333, 692, 1313
TscAI	CASTG	4 cut(s)	236, 268, 541, 1002
TseI	GCWGC	5 cut(s)	478, 517, 568, 679, 708
TspDTI	ATGAA	7 cut(s)	300, 867, 1134, 1247, 1274, 1343, 1392
TspRI	CASTG	4 cut(s)	236, 268, 541, 1002
Van91I	CCANNNNNTGG	1 cut(s)	491
VneI	GTGCAC	1 cut(s)	232
XagI	CCTNNNNNAGG	1 cut(s)	38
XapI	RAATTY	5 cut(s)	327, 448, 1037, 1081, 1338
XhoI	CTCGAG	2 cut(s)	467, 1239
XmiI	GTMKAC	1 cut(s)	960
XmnI	GAANNNNTTC	1 cut(s)	1125
XspI	CTAG	6 cut(s)	366, 623, 1058, 1065, 1302, 1414
ZraI	GACGTC	1 cut(s)	666
ZrmI	AGTACT	1 cut(s)	562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.