RchiOBHm_Chr5g0033451

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
27297565 .. 27300517
2953 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31254

Sequence Viewer

Length: 2058 bp
ATGGGATCCTCAATATGGCTGCTTCTGTTCTTCTTCGTTCCCGCAACCTTACACCACCTTGTTGCTCAAACCATAATAAAAGGCGACGTCTCATGCACTCCGAGGGCTGAATTGTGCTGGAGCTGTGCTGATTCCCGCAAATACACTAATGGCAGCGTCTACCAACAAAACCTCATCAGCCTCCTCTCCTCCTTTTCCAACACCTCCCAAAACCAAACCACCTATGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATTGCATTGTGCAGAGGAGACCTCGCACTCGGAGAATGTCGTAGCTGTCTCAGCGACTCCACTCAGATTCTCCTGCGAAATTGTTCATATAAAACGGAAGCAATCTTATGGGCAGAGCCTTGCATGGTACGGTACTCTCAAGACTTAATATTTGGTATTGAGGAGGAGCACCCTTTTATATATCTGCCCAGCCCGAACACCGCTTTAAACCCGCAAGCGTACGGGCAGGTGCTTAACCCCTTGTTGGAAACCTTAAGAGACAGAGCTACTTCAGGTGATTCTCGAAAAAAATATGCAGCAGGACATGCAGTTGTTCCAGCTCCAGCAGGACATGCAGACGATCGCGAACCGATATATGCACATGCGCAGTGCACTCCGGACATAGACAAAGTCAATTGCCGTAATTGCCTGAACAGTTGCATCTCTGCTATTCCACGATGTTGCAGTGGAAAGTCAGGAACAAGAGTTCTTAAACCAAGTTGTAATATAAGGTTTGAGTACGGTCTTTTCTATAAGTCTACAGCCGATTCAGAAGTAAATATTTCAGCTCCAGCTACTCCAACAACTCCAGTACTTCCACCTAAGCAAGGAAAGAAGAGTTACACAAAAAGAAATATCATCATCATCATTGTGGTTGTGATTGCTTTTGTCACTACGCTTCTCGGTGGCATATGCGTTTTATTAAGAGTCAAGCAGCCAAGGGTAAAACTTGATGAGAATAATTCTGAAGAAATTAGCGTCACGGAATCATTACAATATGACTTTGAAGATATAAGATCTGCAACAGATGACTTTTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAGGCTATATAACGGAAGATATATAGCTGTGAAAAGACTCTCTAAGAGTTCTGGACAAGGTGATCGTGAATTTAAAAATGAAGTCACCTTAGTTGCTCAACTTCAACACCGAAACTTAGTAAGGCTCTTAGGTTTTTGCTTGAAAGCAAATGAAAGGCTCCTCATTTACGAATATATACCGAATACAAGTCTTGATCACTTCATTTTTGATCCAACCAAACATGGGCATTTGGACTGGGAATCACGTTACAAAATCATAGGAGGAATTGTTCGCGGTCTTCTTTACCTCCATGAAGATTCTCGACTTCGAATTATTCACCGTGATCTCAAAGCCAGCAACATTTTATTGGATGAAGATATGAACCCCAAAATTGCAGATTTTGGGATGGCAAGGTTGTTTGTCATGGATCAAACTCAAGGAGATACAAAAACCATTGTTGGTACCTATGGATACATGGCACCTGAATATGCAAGTCAAGGGCGCTTTTCTATTAAGTCGGATGTCTTCAGTTTTGGTGTGTTAGTTCTTGAAATAATTACTGGCAAGAAGACTGGTAGTTTCCGGAATGGTGAAAATGAAGATGACCTGTTAAGCTATGCCTGGAGAAATTGGAGGGATGATACAATTCTAAATATCATAGATCCCATGTTAACAACAGGCTCAAGATCTGAAATAATCAGATGCATCCACATTGGTTTATTATGTGTCCAAGAAAATGTGAATGACAGACCAACCATGGCTTCAGTTGTTTCCATGCTTAACAGTCATTCTCTCACAATCTCAGTACCTTCACGACCTCCATATTATTGGCATTATAACATTGATTCAGATACATCAGGGTCGGGATTCAGACTTACTGAGGCGTCTGATAAATCTGAAAACTCTGTGTATGTGTCAAGAGGTATGGTTTCAGATATTACTGAAGTACATCCACGCTAG

Protein Analysis

685

Amino Acids

76.48

Weight (kDa)

7.21

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 42 - 138 3.6e-21 Salt stress response/antifungal
Stress-antifung PF01657 162 - 257 3.4e-10 Salt stress response/antifungal
Pkinase PF00069 357 - 623 1.9e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 359 - 626 5.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1935
AarI CACCTGC 1 cut(s) 490
AatII GACGTC 1 cut(s) 90
Acc16I TGCGCA 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 490
Acc65I GGTACC 1 cut(s) 1559
AccB1I GGYRCC 2 cut(s) 1559, 1576
AccI GTMKAC 2 cut(s) 159, 791
AccII CGCG 2 cut(s) 618, 1392
AccIII TCCGGA 2 cut(s) 649, 1680
AciI CCGC 5 cut(s) 42, 136, 474, 485, 1392
AclWI GGATC 4 cut(s) 13, 1322, 1533, 1754
AcsI RAATTY 1 cut(s) 1187
AcuI CTGAAG 4 cut(s) 528, 1020, 1609, 1845
AcyI GRCGYC 2 cut(s) 87, 1982
AfaI GTAC 8 cut(s) 402, 407, 494, 773, 846, 1561, 1905, 2046
AfiI CCNNNNNNNGG 4 cut(s) 15, 517, 860, 1341
AflII CTTAAG 1 cut(s) 526
AgsI TTSAA 4 cut(s) 1040, 1223, 1261, 1649
AjnI CCWGG 1 cut(s) 1718
AjuI GAANNNNNNNTTGG 4 cut(s) 1068, 1100, 1843, 1875
AloI GAACNNNNNNTCC 4 cut(s) 723, 755, 1371, 1403
Alw21I GWGCWC 2 cut(s) 444, 647
Alw26I GTCTC 4 cut(s) 94, 285, 326, 525
Alw44I GTGCAC 1 cut(s) 643
AlwI GGATC 4 cut(s) 13, 1322, 1533, 1754
Aor13HI TCCGGA 2 cut(s) 649, 1680
ApaLI GTGCAC 1 cut(s) 643
ApeKI GCWGC 4 cut(s) 19, 153, 569, 967
ApoI RAATTY 1 cut(s) 1187
ArsI GACNNNNNNTTYG 2 cut(s) 407, 439
Asp700I GAANNNNTTC 1 cut(s) 355
Asp718I GGTACC 1 cut(s) 1559
AspLEI GCGC 2 cut(s) 640, 1602
AsuHPI GGTGA 5 cut(s) 560, 1190, 1195, 1427, 1700
AsuII TTCGAA 1 cut(s) 1426
BaeGI GKGCMC 1 cut(s) 647
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 2 cut(s) 1559, 1576
BbsI GAAGAC 3 cut(s) 1388, 1615, 1673
Bbv12I GWGCWC 2 cut(s) 444, 647
BbvI GCAGC 4 cut(s) 6, 165, 581, 979
BccI CCATC 1 cut(s) 1498
BceAI ACGGC 1 cut(s) 657
BciT130I CCWGG 1 cut(s) 1720
BciVI GTATCC 1 cut(s) 1562
BclI TGATCA 1 cut(s) 1312
BcoDI GTCTC 4 cut(s) 94, 285, 326, 525
BfaI CTAG 1 cut(s) 2056
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 1 cut(s) 1603
BfrI CTTAAG 1 cut(s) 526
BfuAI ACCTGC 1 cut(s) 490
BfuI GTATCC 1 cut(s) 1562
BglII AGATCT 2 cut(s) 1049, 1784
BisI GCNGC 4 cut(s) 20, 154, 570, 968
BlsI GCNGC 4 cut(s) 21, 155, 571, 969
BmcAI AGTACT 1 cut(s) 846
Bme1390I CCNGG 1 cut(s) 1720
BmiI GGNNCC 5 cut(s) 7, 256, 1277, 1561, 1578
BmrFI CCNGG 1 cut(s) 1720
BmrI ACTGGG 1 cut(s) 1363
BmsI GCATC 3 cut(s) 702, 1790, 1812
BmuI ACTGGG 1 cut(s) 1363
BpiI GAAGAC 3 cut(s) 1388, 1615, 1673
BplI GAGNNNNNCTC 2 cut(s) 279, 311
BpmI CTGGAG 5 cut(s) 139, 579, 807, 825, 1741
Bpu10I CCTNAGC 1 cut(s) 855
Bpu14I TTCGAA 1 cut(s) 1426
BpuEI CTTGAG 3 cut(s) 396, 1518, 1765
BsaHI GRCGYC 2 cut(s) 87, 1982
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 101, 971, 1854
BsaWI WCCGGW 2 cut(s) 649, 1680
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 4 cut(s) 15, 517, 860, 1341
Bse1I ACTGG 4 cut(s) 842, 1358, 1663, 1675
Bse3DI GCAATG 1 cut(s) 273
BseAI TCCGGA 2 cut(s) 649, 1680
BseBI CCWGG 1 cut(s) 1720
BseDI CCNNGG 3 cut(s) 101, 971, 1854
BseGI GGATG 6 cut(s) 1474, 1509, 1624, 1741, 1803, 2047
BseLI CCNNNNNNNGG 4 cut(s) 15, 517, 860, 1341
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 4 cut(s) 337, 350, 1914, 1968
BseNI ACTGG 4 cut(s) 842, 1358, 1663, 1675
BseRI GAGGAG 6 cut(s) 173, 178, 303, 449, 452, 1268
BseSI GKGCMC 1 cut(s) 647
BseXI GCAGC 4 cut(s) 6, 165, 581, 979
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 2 cut(s) 618, 1392
Bsh1285I CGRYCG 1 cut(s) 616
BshNI GGYRCC 2 cut(s) 1559, 1576
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 444, 647
BsiSI CCGG 2 cut(s) 650, 1681
BsiWI CGTACG 1 cut(s) 492
BslI CCNNNNNNNGG 4 cut(s) 15, 517, 860, 1341
BsmAI GTCTC 4 cut(s) 94, 285, 326, 525
BsmBI CGTCTC 1 cut(s) 94
BsmI GAATGC 1 cut(s) 274
Bso31I GGTCTC 1 cut(s) 285
Bsp119I TTCGAA 1 cut(s) 1426
Bsp1286I GDGCHC 2 cut(s) 444, 647
Bsp13I TCCGGA 2 cut(s) 649, 1680
Bsp19I CCATGG 1 cut(s) 1854
Bsp68I TCGCGA 1 cut(s) 618
BspACI CCGC 5 cut(s) 42, 136, 474, 485, 1392
BspCNI CTCAG 4 cut(s) 336, 349, 1913, 1969
BspEI TCCGGA 2 cut(s) 649, 1680
BspFNI CGCG 2 cut(s) 618, 1392
BspLI GGNNCC 5 cut(s) 7, 256, 1277, 1561, 1578
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 4 cut(s) 13, 1322, 1533, 1754
BspT104I TTCGAA 1 cut(s) 1426
BspT107I GGYRCC 2 cut(s) 1559, 1576
BspTI CTTAAG 1 cut(s) 526
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 273
BsrI ACTGG 4 cut(s) 842, 1358, 1663, 1675
BssECI CCNNGG 3 cut(s) 101, 971, 1854
BssNI GRCGYC 2 cut(s) 87, 1982
BssT1I CCWWGG 2 cut(s) 971, 1854
Bst2UI CCWGG 1 cut(s) 1720
Bst4CI ACNGT 5 cut(s) 405, 689, 776, 1439, 1883
Bst6I CTCTTC 2 cut(s) 244, 863
BstACI GRCGYC 2 cut(s) 87, 1982
BstAFI CTTAAG 1 cut(s) 526
BstAPI GCANNNNNTGC 2 cut(s) 578, 605
BstBI TTCGAA 1 cut(s) 1426
BstC8I GCNNGC 2 cut(s) 489, 1453
BstDEI CTNAG 9 cut(s) 323, 336, 855, 1161, 1207, 1234, 1246, 1900, 1977
BstDSI CCRYGG 1 cut(s) 1854
BstENI CCTNNNNNAGG 1 cut(s) 858
BstF5I GGATG 6 cut(s) 1474, 1509, 1624, 1741, 1803, 2047
BstFNI CGCG 2 cut(s) 618, 1392
BstH2I RGCGCY 1 cut(s) 1603
BstHHI GCGC 2 cut(s) 640, 1602
BstMAI GTCTC 4 cut(s) 94, 285, 326, 525
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 4 cut(s) 324, 578, 605, 678
BstNI CCWGG 1 cut(s) 1720
BstNSI RCATGY 3 cut(s) 581, 608, 638
BstSCI CCNGG 1 cut(s) 1718
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 647
BstUI CGCG 2 cut(s) 618, 1392
BstV1I GCAGC 4 cut(s) 6, 165, 581, 979
BstV2I GAAGAC 3 cut(s) 1388, 1615, 1673
BstX2I RGATCY 4 cut(s) 5, 1049, 1759, 1784
BstXI CCANNNNNNTGG 1 cut(s) 1926
BstYI RGATCY 4 cut(s) 5, 1049, 1759, 1784
BsuI GTATCC 1 cut(s) 1562
BtgI CCRYGG 1 cut(s) 1854
BtsCI GGATG 6 cut(s) 1474, 1509, 1624, 1741, 1803, 2047
BtsI GCAGTG 2 cut(s) 647, 724
BtsIMutI CAGTG 2 cut(s) 647, 724
BtuMI TCGCGA 1 cut(s) 618
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 2 cut(s) 489, 1453
CfoI GCGC 2 cut(s) 640, 1602
CseI GACGC 3 cut(s) 145, 1000, 1971
Csp6I GTAC 8 cut(s) 401, 406, 493, 772, 845, 1560, 1904, 2045
CviQI GTAC 8 cut(s) 401, 406, 493, 772, 845, 1560, 1904, 2045
DdeI CTNAG 9 cut(s) 323, 336, 855, 1161, 1207, 1234, 1246, 1900, 1977
DraI TTTAAA 2 cut(s) 480, 1192
Eam1104I CTCTTC 2 cut(s) 244, 863
EarI CTCTTC 2 cut(s) 244, 863
Eco130I CCWWGG 2 cut(s) 971, 1854
Eco31I GGTCTC 1 cut(s) 285
Eco57I CTGAAG 4 cut(s) 528, 1020, 1609, 1845
EcoNI CCTNNNNNAGG 1 cut(s) 858
EcoRII CCWGG 1 cut(s) 1718
EcoT14I CCWWGG 2 cut(s) 971, 1854
EcoT22I ATGCAT 1 cut(s) 1805
ErhI CCWWGG 2 cut(s) 971, 1854
Esp3I CGTCTC 1 cut(s) 94
FauI CCCGC 3 cut(s) 49, 143, 492
FauNDI CATATG 1 cut(s) 944
FbaI TGATCA 1 cut(s) 1312
FblI GTMKAC 2 cut(s) 159, 791
Fnu4HI GCNGC 4 cut(s) 20, 154, 570, 968
FokI GGATG 6 cut(s) 1481, 1516, 1631, 1748, 1790, 2034
Fsp4HI GCNGC 4 cut(s) 20, 154, 570, 968
FspBI CTAG 1 cut(s) 2056
FspI TGCGCA 1 cut(s) 639
GlaI GCGC 2 cut(s) 639, 1601
GluI GCNGC 4 cut(s) 20, 154, 570, 968
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 5 cut(s) 139, 579, 807, 825, 1741
HaeII RGCGCY 1 cut(s) 1603
HapII CCGG 2 cut(s) 650, 1681
HgaI GACGC 3 cut(s) 145, 1000, 1971
HhaI GCGC 2 cut(s) 640, 1602
Hin1I GRCGYC 2 cut(s) 87, 1982
Hin6I GCGC 2 cut(s) 638, 1600
HinP1I GCGC 2 cut(s) 638, 1600
HincII GTYRAC 1 cut(s) 1770
HindII GTYRAC 1 cut(s) 1770
HindIII AAGCTT 1 cut(s) 1082
HpaI GTTAAC 1 cut(s) 1770
HpaII CCGG 2 cut(s) 650, 1681
HphI GGTGA 5 cut(s) 560, 1190, 1195, 1427, 1700
Hpy166II GTNNAC 5 cut(s) 160, 645, 792, 1111, 1770
Hpy8I GTNNAC 5 cut(s) 160, 645, 792, 1111, 1770
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 1 cut(s) 1917
HpyCH4III ACNGT 5 cut(s) 405, 689, 776, 1439, 1883
HpyCH4IV ACGT 2 cut(s) 87, 1363
HpyF10VI GCNNNNNNNGC 4 cut(s) 324, 578, 605, 678
HpyF3I CTNAG 9 cut(s) 323, 336, 855, 1161, 1207, 1234, 1246, 1900, 1977
HpySE526I ACGT 2 cut(s) 87, 1363
Hsp92I GRCGYC 2 cut(s) 87, 1982
HspAI GCGC 2 cut(s) 638, 1600
Kpn2I TCCGGA 2 cut(s) 649, 1680
KpnI GGTACC 1 cut(s) 1563
Ksp22I TGATCA 1 cut(s) 1312
KspAI GTTAAC 1 cut(s) 1770
LmnI GCTCC 7 cut(s) 120, 260, 439, 598, 826, 1103, 1281
Lsp1109I GCAGC 4 cut(s) 6, 165, 581, 979
LweI GCATC 3 cut(s) 702, 1790, 1812
MaeI CTAG 1 cut(s) 2056
MaeII ACGT 2 cut(s) 87, 1363
MaeIII GTNAC 5 cut(s) 872, 922, 1012, 1201, 1364
MfeI CAATTG 1 cut(s) 667
MflI RGATCY 4 cut(s) 5, 1049, 1759, 1784
MhlI GDGCHC 2 cut(s) 444, 647
MlyI GAGTC 3 cut(s) 323, 969, 1149
MmeI TCCRAC 6 cut(s) 222, 282, 498, 857, 1355, 1596
Mph1103I ATGCAT 1 cut(s) 1805
MroI TCCGGA 2 cut(s) 649, 1680
MroXI GAANNNNTTC 1 cut(s) 355
MslI CAYNNNNRTG 1 cut(s) 902
MspCI CTTAAG 1 cut(s) 526
MspI CCGG 2 cut(s) 650, 1681
MspR9I CCNGG 1 cut(s) 1720
MunI CAATTG 1 cut(s) 667
Mva1269I GAATGC 1 cut(s) 274
MvaI CCWGG 1 cut(s) 1720
MvnI CGCG 2 cut(s) 618, 1392
MwoI GCNNNNNNNGC 4 cut(s) 324, 578, 605, 678
NcoI CCATGG 1 cut(s) 1854
NdeI CATATG 1 cut(s) 944
NlaIV GGNNCC 5 cut(s) 7, 256, 1277, 1561, 1578
NmuCI GTSAC 3 cut(s) 922, 1012, 1201
NruI TCGCGA 1 cut(s) 618
NsbI TGCGCA 1 cut(s) 639
NsiI ATGCAT 1 cut(s) 1805
NspI RCATGY 3 cut(s) 581, 608, 638
NspV TTCGAA 1 cut(s) 1426
PaqCI CACCTGC 1 cut(s) 490
PctI GAATGC 1 cut(s) 274
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 9 cut(s) 131, 340, 551, 800, 1019, 1358, 1415, 1943, 1965
Pfl23II CGTACG 1 cut(s) 492
PflFI GACNNNGTC 1 cut(s) 662
PkrI GCNGC 4 cut(s) 21, 155, 571, 969
Ple19I CGATCG 1 cut(s) 616
PleI GAGTC 3 cut(s) 323, 968, 1149
PpsI GAGTC 3 cut(s) 323, 968, 1149
PsiI TTATAA 1 cut(s) 1935
Psp6I CCWGG 1 cut(s) 1718
PspFI CCCAGC 1 cut(s) 461
PspGI CCWGG 1 cut(s) 1718
PspLI CGTACG 1 cut(s) 492
PspN4I GGNNCC 5 cut(s) 7, 256, 1277, 1561, 1578
PsuI RGATCY 4 cut(s) 5, 1049, 1759, 1784
PsyI GACNNNGTC 1 cut(s) 662
PvuI CGATCG 1 cut(s) 616
RruI TCGCGA 1 cut(s) 618
RsaI GTAC 8 cut(s) 402, 407, 494, 773, 846, 1561, 1905, 2046
RsaNI GTAC 8 cut(s) 401, 406, 493, 772, 845, 1560, 1904, 2045
RseI CAYNNNNRTG 1 cut(s) 902
SatI GCNGC 4 cut(s) 20, 154, 570, 968
ScaI AGTACT 1 cut(s) 846
SchI GAGTC 3 cut(s) 323, 969, 1149
ScrFI CCNGG 1 cut(s) 1720
SduI GDGCHC 2 cut(s) 444, 647
SfaNI GCATC 3 cut(s) 702, 1790, 1812
SfcI CTRYAG 1 cut(s) 792
SfuI TTCGAA 1 cut(s) 1426
SmiMI CAYNNNNRTG 1 cut(s) 902
SmlI CTYRAG 4 cut(s) 411, 526, 1533, 1780
SmoI CTYRAG 4 cut(s) 411, 526, 1533, 1780
SsiI CCGC 5 cut(s) 42, 136, 474, 485, 1392
SspI AATATT 2 cut(s) 423, 814
SspMI CTAG 1 cut(s) 2056
StyD4I CCNGG 1 cut(s) 1718
StyI CCWWGG 2 cut(s) 971, 1854
TaaI ACNGT 5 cut(s) 405, 689, 776, 1439, 1883
TaiI ACGT 2 cut(s) 90, 1366
TaqI TCGA 3 cut(s) 556, 1420, 1426
TatI WGTACW 2 cut(s) 844, 2044
TfiI GAWTC 9 cut(s) 131, 340, 551, 800, 1019, 1358, 1415, 1943, 1965
TscAI CASTG 2 cut(s) 647, 724
TseFI GTSAC 3 cut(s) 922, 1012, 1201
TseI GCWGC 4 cut(s) 19, 153, 569, 967
Tsp45I GTSAC 3 cut(s) 922, 1012, 1201
TspDTI ATGAA 9 cut(s) 348, 1089, 1212, 1284, 1309, 1425, 1485, 1493, 1710
TspGWI ACGGA 3 cut(s) 383, 1031, 1146
TspRI CASTG 2 cut(s) 647, 724
Tth111I GACNNNGTC 1 cut(s) 662
Vha464I CTTAAG 1 cut(s) 526
VneI GTGCAC 1 cut(s) 643
XagI CCTNNNNNAGG 1 cut(s) 858
XapI RAATTY 1 cut(s) 1187
XceI RCATGY 3 cut(s) 581, 608, 638
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XmiI GTMKAC 2 cut(s) 159, 791
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 1 cut(s) 2056
ZraI GACGTC 1 cut(s) 88
ZrmI AGTACT 1 cut(s) 846
Zsp2I ATGCAT 1 cut(s) 1805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.