Rw5G003690

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000086
Physical Location & Seq
Forward (+)
3631460 .. 3643302
11843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G003690.1

Sequence Viewer

Length: 1935 bp
ATGAGTTCCTCAAGATTGCTTTTCTTCATGCTAATTCCTATCATCTTGGACCTTGTTGCTCCTGCCACAGCGCAGATTGATGACGGTGTATGTACTTTCACAGCTGATTTCTGCTGGAGATGTTCCAGCATTGGCACCTACACTGATGGCAGCATCTACCAAGAAAACCTCAACAACCTCCTGTCCAACTTCTCTTCCAACACCCAAATCAATTACGGGTTTTACAATTCTTCTATGGGACAGGACCCCAACAAGGTTAATGCAATTGCATTGTGTAGAGGAGATATCGCACTGGATATGTGCCATACTTGTGTCAAGGAGGCCAGTCAACTTCTCTTCCAGAATTGCTCACATCAAAAGGAAGCGATCCTATGGGCTCAGCCTTGTATGGTACGATACTCGAGCAAGTTAATATTTGGTATTCAGGACGATGAACCCATCAAGTATGTCCGTAGCCCTACTGATGCAGCGAACATAGAACAGTTTACACCACTGCTAAATTCCTTGTTGGATACCTTAAGTGAGAAAGCGGCATCAGGGGACTCTCTCAAAAAATATGCAGCAGGACATACAACTCTCCAAGTTGTTCCAAAATATCAAGCAATATATGGACTTGTTCAGTGCACTCCAGATATGGACAAGAACAATTGCAGCAATTGCCTACAAGATGCTATCTCAAAAATTCCAACATGTTGTAGTGGAAAGCAAGGAGGAAGAGTTCTTAAACCCAGCTGCAGTGTAAGGTTTGAGGCCACTCTTTTCTACGAGTCTACAGCCGATTCGGAAGTGAGTCTTCCACCAATAAAAGGAAAGAAGGGGAACGCGTCAAAAACTACCATGATCATCATCATTGTGGCCGTGATTGCTTTTATCCTCACACTTCTCATCAGCATATGCATTTTCTTTAGAGCAAAGAAGAGAAATCTTGAAAGTAAGTCCAACTATGATAATTCTGGTGAAATTAGTTCCGCAGATTCATTGCAATATGACTTTGAAACTATTAGAGATGCAACAGATGACTTCTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTATAAGGGTCGTCTAGCTAATGGACAGTATATAACTGTCAAAAGGCTCTCTAAGAATTCTGAACAGGTTGCTCAACTTCAACATCGGAATTTAGTAAGGCTCCGAGGATTTTGCTTGAAAATGAAGGAAAGGATCCTAATTTACGAATACGTGCCTAACACGAGTCTTGATCACTTCATCTTTGAGAAATTTAACAAAGGTCATATTCATTTCAATGGAATTATACATAGATCCAATCAATCAAGGGCATTTGGATTGGAACACACGTTACAAATCATAGGAGGCATTGCTCGAGGGATTCTCTACCTCCCTGAAGATTCTCGACTTCGAATTATCCATCGTGACCTTAAACCCAGCAATATTTTATTAGATGGGGATATGAATCCTAAAATTGCAGATTTTGGCATGGCAAGATTATTTCTGATGGATCAAACTCAAGGACACACAAACAGAGTCGTAGGGACCTATGGATACATGGCTCCAGAGTATGCCATCCATGGGCGTTTTTCTGTCAAATCGGATGTCTTCAGTTTTGGTGTGTTAGTTCTTGAGATTGTGAGTGGCAAGAAAGTGAGCACTTTTCGGAATGGTGAGAATGAAGAGGACCTTCTCAGCTGTGCATGGCGAAGTTGGAAAGAGGACACAGTTCATAATATCATAGATCCAACATTGACAAAGAGTTCAAGGATTGAAACAATGAGATGTATTCATATTGGCTTACTTTTTGTTTCCATGCTTAATAGCGATTCTGTTACACTCTCACTACCATTGCGACCTGGATATTTTTTGCAATATAATGATGAATCAGACATTACCGAACTGACAGAGTCAAGAAATGAGGCTTCAATTACGAATCCATATCCTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

644

Amino Acids

72.09

Weight (kDa)

6.91

Isoelectric Point (pI)

42.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 40 - 135 5.7e-24 Salt stress response/antifungal
Stress-antifung PF01657 159 - 251 4.9e-13 Salt stress response/antifungal
Pkinase PF00069 342 - 554 1e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 344 - 544 1.5e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1068
AccB1I GGYRCC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 770
AccII CGCG 1 cut(s) 824
AciI CCGC 2 cut(s) 530, 969
AclWI GGATC 6 cut(s) 361, 1192, 1205, 1290, 1500, 1721
AcoI YGGCCR 1 cut(s) 855
AcsI RAATTY 5 cut(s) 499, 681, 1120, 1153, 1253
AcuI CTGAAG 2 cut(s) 1398, 1576
AfaI GTAC 2 cut(s) 94, 393
AfiI CCNNNNNNNGG 3 cut(s) 253, 806, 1563
AflII CTTAAG 1 cut(s) 517
AflIII ACRYGT 3 cut(s) 689, 822, 1329
AgsI TTSAA 8 cut(s) 929, 995, 1145, 1183, 1279, 1749, 1757, 1911
AjnI CCWGG 1 cut(s) 1840
AjuI GAANNNNNNNTTGG 2 cut(s) 1023, 1055
AloI GAACNNNNNNTCC 2 cut(s) 702, 734
AluBI AGCT 6 cut(s) 104, 732, 1039, 1061, 1082, 1680
AluI AGCT 6 cut(s) 104, 732, 1039, 1061, 1082, 1680
Alw21I GWGCWC 2 cut(s) 626, 1643
Alw44I GTGCAC 1 cut(s) 622
AlwI GGATC 6 cut(s) 361, 1192, 1205, 1290, 1500, 1721
Ama87I CYCGRG 2 cut(s) 400, 1356
AoxI GGCC 3 cut(s) 321, 750, 855
ApaLI GTGCAC 1 cut(s) 622
ApeKI GCWGC 5 cut(s) 150, 467, 560, 651, 732
ApoI RAATTY 5 cut(s) 499, 681, 1120, 1153, 1253
ArsI GACNNNNNNTTYG 2 cut(s) 1572, 1604
AspLEI GCGC 1 cut(s) 73
AspS9I GGNCC 4 cut(s) 49, 244, 1527, 1669
AsuHPI GGTGA 2 cut(s) 968, 1667
AsuII TTCGAA 1 cut(s) 1393
AvaI CYCGRG 2 cut(s) 400, 1356
AvaII GGWCC 4 cut(s) 49, 244, 1527, 1669
BaeGI GKGCMC 1 cut(s) 626
BamHI GGATCC 1 cut(s) 1197
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 1 cut(s) 379
BauI CACGAG 1 cut(s) 1225
BbsI GAAGAC 2 cut(s) 785, 1582
Bbv12I GWGCWC 2 cut(s) 626, 1643
BbvI GCAGC 5 cut(s) 162, 479, 572, 663, 719
BccI CCATC 6 cut(s) 140, 446, 1410, 1430, 1483, 1565
BceAI ACGGC 1 cut(s) 842
BcgI CGANNNNNNTGC 2 cut(s) 1158, 1192
BciT130I CCWGG 1 cut(s) 1842
BciVI GTATCC 2 cut(s) 505, 1529
BclI TGATCA 2 cut(s) 840, 1234
BfaI CTAG 2 cut(s) 1079, 1933
BfmI CTRYAG 2 cut(s) 733, 771
BfrI CTTAAG 1 cut(s) 517
BfuI GTATCC 2 cut(s) 505, 1529
BisI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 6 cut(s) 152, 469, 532, 562, 653, 734
Bme1390I CCNGG 1 cut(s) 1842
Bme18I GGWCC 4 cut(s) 49, 244, 1527, 1669
BmeT110I CYCGRG 2 cut(s) 400, 1356
BmgT120I GGNCC 4 cut(s) 49, 244, 1527, 1669
BmiI GGNNCC 6 cut(s) 136, 246, 1166, 1199, 1528, 1545
BmrFI CCNGG 1 cut(s) 1842
BmsI GCATC 5 cut(s) 162, 454, 542, 658, 997
BpiI GAAGAC 2 cut(s) 785, 1582
BplI GAGNNNNNCTC 2 cut(s) 1350, 1382
BpmI CTGGAG 3 cut(s) 136, 612, 1530
Bpu1102I GCTNAGC 1 cut(s) 378
Bpu14I TTCGAA 1 cut(s) 1393
BpuEI CTTGAG 2 cut(s) 1485, 1634
BsaAI YACGTR 1 cut(s) 1216
BsaBI GATNNNNATC 2 cut(s) 845, 1446
BsaJI CCNNGG 2 cut(s) 1168, 1561
BsaXI ACNNNNNCTCC 2 cut(s) 702, 732
Bsc4I CCNNNNNNNGG 3 cut(s) 253, 806, 1563
Bse1I ACTGG 2 cut(s) 297, 324
Bse3DI GCAATG 3 cut(s) 977, 1350, 1832
Bse8I GATNNNNATC 2 cut(s) 845, 1446
BseBI CCWGG 1 cut(s) 1842
BseDI CCNNGG 2 cut(s) 1168, 1561
BseGI GGATG 2 cut(s) 1557, 1591
BseJI GATNNNNATC 2 cut(s) 845, 1446
BseLI CCNNNNNNNGG 3 cut(s) 253, 806, 1563
BseMI GCAATG 3 cut(s) 977, 1350, 1832
BseMII CTCAG 2 cut(s) 392, 1690
BseNI ACTGG 2 cut(s) 297, 324
BseRI GAGGAG 1 cut(s) 294
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 5 cut(s) 162, 479, 572, 663, 719
BseYI CCCAGC 2 cut(s) 728, 1418
Bsh1236I CGCG 1 cut(s) 824
BshFI GGCC 3 cut(s) 323, 752, 857
BshNI GGYRCC 1 cut(s) 134
BsiHKAI GWGCWC 2 cut(s) 626, 1643
BsiHKCI CYCGRG 2 cut(s) 400, 1356
BslFI GGGAC 3 cut(s) 252, 554, 1540
BslI CCNNNNNNNGG 3 cut(s) 253, 806, 1563
BsmFI GGGAC 3 cut(s) 252, 554, 1540
BsnI GGCC 3 cut(s) 323, 752, 857
BsoBI CYCGRG 2 cut(s) 400, 1356
Bsp119I TTCGAA 1 cut(s) 1393
Bsp1286I GDGCHC 3 cut(s) 379, 626, 1643
Bsp143I GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
Bsp1720I GCTNAGC 1 cut(s) 378
Bsp19I CCATGG 1 cut(s) 1561
BspACI CCGC 2 cut(s) 530, 969
BspANI GGCC 3 cut(s) 323, 752, 857
BspCNI CTCAG 2 cut(s) 391, 1689
BspFNI CGCG 1 cut(s) 824
BspLI GGNNCC 6 cut(s) 136, 246, 1166, 1199, 1528, 1545
BspMAI CTGCAG 1 cut(s) 737
BspPI GGATC 6 cut(s) 361, 1192, 1205, 1290, 1500, 1721
BspT104I TTCGAA 1 cut(s) 1393
BspT107I GGYRCC 1 cut(s) 134
BspTI CTTAAG 1 cut(s) 517
BsrDI GCAATG 3 cut(s) 977, 1350, 1832
BsrI ACTGG 2 cut(s) 297, 324
BssECI CCNNGG 2 cut(s) 1168, 1561
BssMI GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
BssSI CACGAG 1 cut(s) 1225
BssT1I CCWWGG 1 cut(s) 1561
Bst2BI CACGAG 1 cut(s) 1225
Bst2UI CCWGG 1 cut(s) 1842
Bst4CI ACNGT 5 cut(s) 86, 483, 1092, 1102, 1711
Bst6I CTCTTC 5 cut(s) 199, 341, 709, 911, 1659
BstAFI CTTAAG 1 cut(s) 517
BstAPI GCANNNNNTGC 1 cut(s) 657
BstBAI YACGTR 1 cut(s) 1216
BstBI TTCGAA 1 cut(s) 1393
BstDEI CTNAG 3 cut(s) 378, 1116, 1676
BstDSI CCRYGG 1 cut(s) 1561
BstF5I GGATG 2 cut(s) 1557, 1591
BstFNI CGCG 1 cut(s) 824
BstHHI GCGC 1 cut(s) 73
BstKTI GATC 7 cut(s) 369, 843, 1200, 1237, 1298, 1495, 1729
BstMBI GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
BstMWI GCNNNNNNNGC 2 cut(s) 657, 863
BstNI CCWGG 1 cut(s) 1842
BstNSI RCATGY 1 cut(s) 693
BstSCI CCNGG 1 cut(s) 1840
BstSFI CTRYAG 2 cut(s) 733, 771
BstSLI GKGCMC 1 cut(s) 626
BstUI CGCG 1 cut(s) 824
BstV1I GCAGC 5 cut(s) 162, 479, 572, 663, 719
BstV2I GAAGAC 2 cut(s) 785, 1582
BstX2I RGATCY 3 cut(s) 1197, 1295, 1726
BstYI RGATCY 3 cut(s) 1197, 1295, 1726
BsuI GTATCC 2 cut(s) 505, 1529
BsuRI GGCC 3 cut(s) 323, 752, 857
BtgI CCRYGG 1 cut(s) 1561
BtsCI GGATG 2 cut(s) 1557, 1591
BtsI GCAGTG 2 cut(s) 491, 742
BtsIMutI CAGTG 5 cut(s) 141, 290, 491, 626, 742
CfoI GCGC 1 cut(s) 73
Cfr13I GGNCC 4 cut(s) 49, 244, 1527, 1669
CseI GACGC 1 cut(s) 813
Csp6I GTAC 2 cut(s) 93, 392
CviAII CATG 8 cut(s) 28, 690, 838, 1471, 1540, 1562, 1686, 1798
CviQI GTAC 2 cut(s) 93, 392
DdeI CTNAG 3 cut(s) 378, 1116, 1676
DpnI GATC 7 cut(s) 368, 842, 1199, 1236, 1297, 1494, 1728
DpnII GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
EaeI YGGCCR 1 cut(s) 855
Eam1104I CTCTTC 5 cut(s) 199, 341, 709, 911, 1659
EarI CTCTTC 5 cut(s) 199, 341, 709, 911, 1659
Eco130I CCWWGG 1 cut(s) 1561
Eco24I GRGCYC 1 cut(s) 379
Eco32I GATATC 1 cut(s) 286
Eco47I GGWCC 4 cut(s) 49, 244, 1527, 1669
Eco57I CTGAAG 2 cut(s) 1398, 1576
Eco88I CYCGRG 2 cut(s) 400, 1356
EcoO109I RGGNCCY 3 cut(s) 244, 1527, 1669
EcoRI GAATTC 1 cut(s) 1120
EcoRII CCWGG 1 cut(s) 1840
EcoRV GATATC 1 cut(s) 286
EcoT14I CCWWGG 1 cut(s) 1561
EcoT22I ATGCAT 1 cut(s) 899
EcoT38I GRGCYC 1 cut(s) 379
ErhI CCWWGG 1 cut(s) 1561
FaeI CATG 8 cut(s) 31, 693, 841, 1474, 1543, 1565, 1689, 1801
FalI AAGNNNNNCTT 4 cut(s) 777, 809, 1656, 1688
FaqI GGGAC 3 cut(s) 252, 554, 1540
FatI CATG 8 cut(s) 27, 689, 837, 1470, 1539, 1561, 1685, 1797
FauNDI CATATG 1 cut(s) 893
FbaI TGATCA 2 cut(s) 840, 1234
FblI GTMKAC 1 cut(s) 770
Fnu4HI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
FokI GGATG 2 cut(s) 1544, 1598
FriOI GRGCYC 1 cut(s) 379
Fsp4HI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
FspBI CTAG 2 cut(s) 1079, 1933
GlaI GCGC 1 cut(s) 72
GluI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
GsaI CCCAGC 2 cut(s) 732, 1422
GsuI CTGGAG 3 cut(s) 136, 612, 1530
HaeIII GGCC 3 cut(s) 323, 752, 857
HgaI GACGC 1 cut(s) 813
HhaI GCGC 1 cut(s) 73
Hin1II CATG 8 cut(s) 31, 693, 841, 1474, 1543, 1565, 1689, 1801
Hin6I GCGC 1 cut(s) 71
HinP1I GCGC 1 cut(s) 71
HincII GTYRAC 1 cut(s) 329
HindII GTYRAC 1 cut(s) 329
HindIII AAGCTT 1 cut(s) 1037
HphI GGTGA 2 cut(s) 968, 1667
Hpy166II GTNNAC 4 cut(s) 329, 486, 624, 771
Hpy188I TCNGA 9 cut(s) 784, 1027, 1126, 1152, 1169, 1488, 1585, 1650, 1873
Hpy8I GTNNAC 4 cut(s) 329, 486, 624, 771
HpyAV CCTTC 3 cut(s) 808, 1183, 1682
HpyCH4III ACNGT 5 cut(s) 86, 483, 1092, 1102, 1711
HpyCH4IV ACGT 2 cut(s) 1215, 1331
HpyF10VI GCNNNNNNNGC 2 cut(s) 657, 863
HpyF3I CTNAG 3 cut(s) 378, 1116, 1676
HpySE526I ACGT 2 cut(s) 1215, 1331
Hsp92II CATG 8 cut(s) 31, 693, 841, 1474, 1543, 1565, 1689, 1801
HspAI GCGC 1 cut(s) 71
Ksp22I TGATCA 2 cut(s) 840, 1234
Kzo9I GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
LmnI GCTCC 4 cut(s) 64, 1058, 1170, 1549
Lsp1109I GCAGC 5 cut(s) 162, 479, 572, 663, 719
LweI GCATC 5 cut(s) 162, 454, 542, 658, 997
MaeI CTAG 2 cut(s) 1079, 1933
MaeII ACGT 2 cut(s) 1215, 1331
MaeIII GTNAC 3 cut(s) 1332, 1406, 1816
MalI GATC 7 cut(s) 368, 842, 1199, 1236, 1297, 1494, 1728
MboI GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
MfeI CAATTG 3 cut(s) 264, 646, 655
MflI RGATCY 3 cut(s) 1197, 1295, 1726
MhlI GDGCHC 3 cut(s) 379, 626, 1643
MluI ACGCGT 1 cut(s) 822
MlyI GAGTC 6 cut(s) 536, 776, 799, 1237, 1527, 1901
MmeI TCCRAC 7 cut(s) 210, 222, 489, 710, 963, 1676, 1754
Mph1103I ATGCAT 1 cut(s) 899
MseI TTAA 7 cut(s) 258, 410, 518, 723, 1257, 1413, 1803
MslI CAYNNNNRTG 3 cut(s) 309, 851, 1278
MspA1I CMGCKG 3 cut(s) 104, 732, 1680
MspCI CTTAAG 1 cut(s) 517
MspR9I CCNGG 1 cut(s) 1842
MunI CAATTG 3 cut(s) 264, 646, 655
MvaI CCWGG 1 cut(s) 1842
MvnI CGCG 1 cut(s) 824
MwoI GCNNNNNNNGC 2 cut(s) 657, 863
NcoI CCATGG 1 cut(s) 1561
NdeI CATATG 1 cut(s) 893
NdeII GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
NlaIII CATG 8 cut(s) 31, 693, 841, 1474, 1543, 1565, 1689, 1801
NlaIV GGNNCC 6 cut(s) 136, 246, 1166, 1199, 1528, 1545
NmuCI GTSAC 1 cut(s) 1406
NsiI ATGCAT 1 cut(s) 899
NspI RCATGY 1 cut(s) 693
NspV TTCGAA 1 cut(s) 1393
PaeR7I CTCGAG 2 cut(s) 400, 1356
PciI ACATGT 1 cut(s) 689
PfeI GAWTC 8 cut(s) 779, 974, 1363, 1382, 1447, 1811, 1868, 1918
PflFI GACNNNGTC 1 cut(s) 1891
PkrI GCNGC 6 cut(s) 152, 469, 532, 562, 653, 734
PleI GAGTC 6 cut(s) 536, 775, 798, 1236, 1526, 1900
PpsI GAGTC 6 cut(s) 536, 775, 798, 1236, 1526, 1900
Ppu21I YACGTR 1 cut(s) 1216
PpuMI RGGWCCY 3 cut(s) 244, 1527, 1669
PscI ACATGT 1 cut(s) 689
PsiI TTATAA 1 cut(s) 1068
Psp5II RGGWCCY 3 cut(s) 244, 1527, 1669
Psp6I CCWGG 1 cut(s) 1840
PspFI CCCAGC 2 cut(s) 728, 1418
PspGI CCWGG 1 cut(s) 1840
PspN4I GGNNCC 6 cut(s) 136, 246, 1166, 1199, 1528, 1545
PspPI GGNCC 4 cut(s) 49, 244, 1527, 1669
PspPPI RGGWCCY 3 cut(s) 244, 1527, 1669
PspXI VCTCGAGB 2 cut(s) 400, 1356
PsrI GAACNNNNNNTAC 2 cut(s) 1317, 1349
PstI CTGCAG 1 cut(s) 737
PsuI RGATCY 3 cut(s) 1197, 1295, 1726
PsyI GACNNNGTC 1 cut(s) 1891
PvuII CAGCTG 3 cut(s) 104, 732, 1680
RsaI GTAC 2 cut(s) 94, 393
RsaNI GTAC 2 cut(s) 93, 392
RseI CAYNNNNRTG 3 cut(s) 309, 851, 1278
SaqAI TTAA 7 cut(s) 258, 410, 518, 723, 1257, 1413, 1803
SatI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
Sau3AI GATC 7 cut(s) 366, 840, 1197, 1234, 1295, 1492, 1726
Sau96I GGNCC 4 cut(s) 49, 244, 1527, 1669
SchI GAGTC 6 cut(s) 536, 776, 799, 1237, 1527, 1901
ScrFI CCNGG 1 cut(s) 1842
SduI GDGCHC 3 cut(s) 379, 626, 1643
SfaNI GCATC 5 cut(s) 162, 454, 542, 658, 997
SfcI CTRYAG 2 cut(s) 733, 771
Sfr274I CTCGAG 2 cut(s) 400, 1356
SfuI TTCGAA 1 cut(s) 1393
SinI GGWCC 4 cut(s) 49, 244, 1527, 1669
SlaI CTCGAG 2 cut(s) 400, 1356
SmiMI CAYNNNNRTG 3 cut(s) 309, 851, 1278
SmlI CTYRAG 6 cut(s) 10, 400, 517, 1356, 1500, 1613
SmoI CTYRAG 6 cut(s) 10, 400, 517, 1356, 1500, 1613
SsiI CCGC 2 cut(s) 530, 969
SspI AATATT 2 cut(s) 414, 1426
SspMI CTAG 2 cut(s) 1079, 1933
StyD4I CCNGG 1 cut(s) 1840
StyI CCWWGG 1 cut(s) 1561
TaaI ACNGT 5 cut(s) 86, 483, 1092, 1102, 1711
TaiI ACGT 2 cut(s) 1218, 1334
TaqI TCGA 4 cut(s) 401, 1357, 1387, 1393
TatI WGTACW 1 cut(s) 92
TauI GCSGC 1 cut(s) 533
TfiI GAWTC 8 cut(s) 779, 974, 1363, 1382, 1447, 1811, 1868, 1918
Tru1I TTAA 7 cut(s) 258, 410, 518, 723, 1257, 1413, 1803
Tru9I TTAA 7 cut(s) 258, 410, 518, 723, 1257, 1413, 1803
TscAI CASTG 5 cut(s) 148, 297, 498, 626, 742
TseFI GTSAC 1 cut(s) 1406
TseI GCWGC 5 cut(s) 150, 467, 560, 651, 732
Tsp45I GTSAC 1 cut(s) 1406
TspGWI ACGGA 1 cut(s) 440
TspRI CASTG 5 cut(s) 148, 297, 498, 626, 742
Tth111I GACNNNGTC 1 cut(s) 1891
Vha464I CTTAAG 1 cut(s) 517
VneI GTGCAC 1 cut(s) 622
VpaK11BI GGWCC 4 cut(s) 49, 244, 1527, 1669
XapI RAATTY 5 cut(s) 499, 681, 1120, 1153, 1253
XceI RCATGY 1 cut(s) 693
XhoI CTCGAG 2 cut(s) 400, 1356
XmiI GTMKAC 1 cut(s) 770
XspI CTAG 2 cut(s) 1079, 1933
Zsp2I ATGCAT 1 cut(s) 899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.