pycom01g05620

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
5471257 .. 5471953
697 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g05620.2

Sequence Viewer

Length: 555 bp
ATGGCGCCATTAAAGGTCTGCTCAAGATTTATGTTCTTCCTTTGTCCACATCTGTTACTCCTTACTATTCAAGTCATTGCTCAGCCAGATTTTCAAAGTGTTAAATGTTTTAATGAGAAAGGTAACTACACCACCAGTAGCACCAACCAAACGAACCTCAATACCCTTCTCTCATCCCTTTCTTCACCCTTTAACAACGGCAACGACTACAACTTCTACAACTTATCCTACGGCCAAAACTCCAACCAGGTTCATGCAATCGCGCTTTGCAGAGGAAACGTTGAGGCGGACGTTTGCCATAGCTGCCTCAAAAACTCTACACAAAAGATCACAGAGGTTTGTCCCAACCAGAAAGAAGTTTTTGGCTATTACGATGAGTCGAATGGTTTGCTTCGTAAGTTTGCAATAGGGACAACAACAGCTCTTAATTTCCAACCAGTATATGGACTTGTGCAGTGCACGCCGGATTTGTCCGAGCTAGACTGCTCTGATTGCTTGGCTCGCACTGTGGCAGAAATCACAAATTGTTGTGGGATGAAGCAAGGTGGTAAGTAA

Protein Analysis

185

Amino Acids

20.33

Weight (kDa)

6.26

Isoelectric Point (pI)

26.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 1 cut(s) 443
AccII CGCG 1 cut(s) 263
AciI CCGC 1 cut(s) 287
AclI AACGTT 1 cut(s) 279
AcoI YGGCCR 1 cut(s) 232
AcyI GRCGYC 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 443
AgsI TTSAA 2 cut(s) 71, 95
AjnI CCWGG 1 cut(s) 246
AluBI AGCT 3 cut(s) 303, 422, 478
AluI AGCT 3 cut(s) 303, 422, 478
Alw21I GWGCWC 1 cut(s) 461
Alw44I GTGCAC 1 cut(s) 457
AoxI GGCC 1 cut(s) 232
ApaLI GTGCAC 1 cut(s) 457
ApeKI GCWGC 1 cut(s) 303
AspLEI GCGC 2 cut(s) 7, 265
AsuHPI GGTGA 1 cut(s) 177
BaeGI GKGCMC 1 cut(s) 461
BanI GGYRCC 1 cut(s) 4
Bbv12I GWGCWC 1 cut(s) 461
BbvI GCAGC 1 cut(s) 290
BceAI ACGGC 2 cut(s) 214, 247
BcgI CGANNNNNNTGC 2 cut(s) 370, 404
BciT130I CCWGG 1 cut(s) 248
BfaI CTAG 1 cut(s) 479
BfoI RGCGCY 1 cut(s) 8
BisI GCNGC 1 cut(s) 304
BlpI GCTNAGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 305
Bme1390I CCNGG 1 cut(s) 248
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 248
Bpu1102I GCTNAGC 1 cut(s) 81
BpuEI CTTGAG 1 cut(s) 7
BsaHI GRCGYC 1 cut(s) 5
Bsc4I CCNNNNNNNGG 1 cut(s) 443
Bse1I ACTGG 2 cut(s) 135, 437
Bse3DI GCAATG 1 cut(s) 75
BseBI CCWGG 1 cut(s) 248
BseGI GGATG 2 cut(s) 173, 540
BseLI CCNNNNNNNGG 1 cut(s) 443
BseMI GCAATG 1 cut(s) 75
BseMII CTCAG 1 cut(s) 95
BseNI ACTGG 2 cut(s) 135, 437
BseSI GKGCMC 1 cut(s) 461
BseXI GCAGC 1 cut(s) 290
BsgI GTGCAG 1 cut(s) 473
Bsh1236I CGCG 1 cut(s) 263
BshFI GGCC 1 cut(s) 234
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 461
BsiSI CCGG 1 cut(s) 464
BslFI GGGAC 2 cut(s) 327, 424
BslI CCNNNNNNNGG 1 cut(s) 443
BsmFI GGGAC 2 cut(s) 327, 424
BsnI GGCC 1 cut(s) 234
Bsp1286I GDGCHC 1 cut(s) 461
Bsp143I GATC 1 cut(s) 327
Bsp1720I GCTNAGC 1 cut(s) 81
BspACI CCGC 1 cut(s) 287
BspANI GGCC 1 cut(s) 234
BspCNI CTCAG 1 cut(s) 94
BspFNI CGCG 1 cut(s) 263
BspLI GGNNCC 1 cut(s) 6
BspT107I GGYRCC 1 cut(s) 4
BsrDI GCAATG 1 cut(s) 75
BsrI ACTGG 2 cut(s) 135, 437
BssMI GATC 1 cut(s) 327
BssNI GRCGYC 1 cut(s) 5
Bst2UI CCWGG 1 cut(s) 248
Bst4CI ACNGT 1 cut(s) 508
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 2 cut(s) 461, 502
BstDEI CTNAG 1 cut(s) 81
BstF5I GGATG 2 cut(s) 173, 540
BstFNI CGCG 1 cut(s) 263
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 265
BstKTI GATC 1 cut(s) 330
BstMBI GATC 1 cut(s) 327
BstMWI GCNNNNNNNGC 4 cut(s) 303, 460, 492, 501
BstNI CCWGG 1 cut(s) 248
BstSCI CCNGG 1 cut(s) 246
BstSLI GKGCMC 1 cut(s) 461
BstUI CGCG 1 cut(s) 263
BstV1I GCAGC 1 cut(s) 290
BsuRI GGCC 1 cut(s) 234
BtsCI GGATG 2 cut(s) 173, 540
BtsI GCAGTG 1 cut(s) 461
BtsIMutI CAGTG 2 cut(s) 461, 504
Cac8I GCNNGC 2 cut(s) 461, 502
CfoI GCGC 2 cut(s) 7, 265
CsiI ACCWGGT 1 cut(s) 246
CviAII CATG 1 cut(s) 254
CviJI RGCY 7 cut(s) 85, 234, 303, 366, 422, 478, 500
CviKI_1 RGCY 7 cut(s) 85, 234, 303, 366, 422, 478, 500
DdeI CTNAG 1 cut(s) 81
DinI GGCGCC 1 cut(s) 6
DpnI GATC 1 cut(s) 329
DpnII GATC 1 cut(s) 327
EaeI YGGCCR 1 cut(s) 232
EciI GGCGGA 1 cut(s) 302
EcoRII CCWGG 1 cut(s) 246
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
FaeI CATG 1 cut(s) 257
FaiI YATR 5 cut(s) 32, 255, 300, 442, 444
FaqI GGGAC 2 cut(s) 327, 424
FatI CATG 1 cut(s) 253
Fnu4HI GCNGC 1 cut(s) 304
FokI GGATG 2 cut(s) 160, 547
Fsp4HI GCNGC 1 cut(s) 304
FspBI CTAG 1 cut(s) 479
GlaI GCGC 2 cut(s) 6, 264
GluI GCNGC 1 cut(s) 304
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 1 cut(s) 234
HapII CCGG 1 cut(s) 464
HhaI GCGC 2 cut(s) 7, 265
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 1 cut(s) 257
Hin6I GCGC 2 cut(s) 5, 263
HinP1I GCGC 2 cut(s) 5, 263
HinfI GANTC 1 cut(s) 377
HpaII CCGG 1 cut(s) 464
HphI GGTGA 1 cut(s) 177
Hpy166II GTNNAC 2 cut(s) 47, 459
Hpy188I TCNGA 2 cut(s) 475, 490
Hpy188III TCNNGA 1 cut(s) 24
Hpy8I GTNNAC 2 cut(s) 47, 459
HpyAV CCTTC 1 cut(s) 176
HpyCH4III ACNGT 1 cut(s) 508
HpyCH4IV ACGT 2 cut(s) 279, 291
HpyCH4V TGCA 5 cut(s) 257, 270, 404, 454, 459
HpyF10VI GCNNNNNNNGC 4 cut(s) 303, 460, 492, 501
HpyF3I CTNAG 1 cut(s) 81
HpySE526I ACGT 2 cut(s) 279, 291
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 1 cut(s) 257
HspAI GCGC 2 cut(s) 5, 263
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 1 cut(s) 327
LpnPI CCDG 7 cut(s) 99, 148, 233, 260, 362, 450, 477
Lsp1109I GCAGC 1 cut(s) 290
MabI ACCWGGT 1 cut(s) 246
MaeI CTAG 1 cut(s) 479
MaeII ACGT 2 cut(s) 279, 291
MaeIII GTNAC 2 cut(s) 54, 122
MalI GATC 1 cut(s) 329
MboI GATC 1 cut(s) 327
MboII GAAGA 2 cut(s) 28, 174
MhlI GDGCHC 1 cut(s) 461
MluCI AATT 2 cut(s) 427, 523
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 386
MmeI TCCRAC 2 cut(s) 267, 457
MnlI CCTC 5 cut(s) 167, 266, 277, 317, 328
MseI TTAA 5 cut(s) 11, 102, 111, 192, 426
MspI CCGG 1 cut(s) 464
MspR9I CCNGG 1 cut(s) 248
MvaI CCWGG 1 cut(s) 248
MvnI CGCG 1 cut(s) 263
MwoI GCNNNNNNNGC 4 cut(s) 303, 460, 492, 501
NarI GGCGCC 1 cut(s) 5
NdeII GATC 1 cut(s) 327
NlaIII CATG 1 cut(s) 257
NlaIV GGNNCC 1 cut(s) 6
PflMI CCANNNNNTGG 1 cut(s) 443
PkrI GCNGC 1 cut(s) 305
PleI GAGTC 1 cut(s) 385
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 385
Psp1406I AACGTT 1 cut(s) 279
Psp6I CCWGG 1 cut(s) 246
PspGI CCWGG 1 cut(s) 246
PspN4I GGNNCC 1 cut(s) 6
SaqAI TTAA 5 cut(s) 11, 102, 111, 192, 426
SatI GCNGC 1 cut(s) 304
Sau3AI GATC 1 cut(s) 327
SchI GAGTC 1 cut(s) 386
ScrFI CCNGG 1 cut(s) 248
SduI GDGCHC 1 cut(s) 461
SexAI ACCWGGT 1 cut(s) 246
SfoI GGCGCC 1 cut(s) 6
SmlI CTYRAG 1 cut(s) 22
SmoI CTYRAG 1 cut(s) 22
Sse9I AATT 2 cut(s) 427, 523
SsiI CCGC 1 cut(s) 287
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 1 cut(s) 479
StyD4I CCNGG 1 cut(s) 246
TaaI ACNGT 1 cut(s) 508
TaiI ACGT 2 cut(s) 282, 294
TaqI TCGA 1 cut(s) 380
TasI AATT 2 cut(s) 427, 523
Tru1I TTAA 5 cut(s) 11, 102, 111, 192, 426
Tru9I TTAA 5 cut(s) 11, 102, 111, 192, 426
TscAI CASTG 2 cut(s) 461, 511
TseI GCWGC 1 cut(s) 303
TspDTI ATGAA 2 cut(s) 242, 551
TspRI CASTG 2 cut(s) 461, 511
Van91I CCANNNNNTGG 1 cut(s) 443
VneI GTGCAC 1 cut(s) 457
XcmI CCANNNNNNNNNTGG 1 cut(s) 440
XspI CTAG 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.