Rw7G038700

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
59205561 .. 59208688
3128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G038700.1

Sequence Viewer

Length: 2007 bp
ATGAAATCATCAAGCTTTAGATTGTTTCTTTCATTGATACAACTTGTGTTGCTCGTAGCTCAAGCCCTTGATCAACCGCCTTTCCTGTACAACTTCTGTATAAACGAGACAGGTAACTATACCGCTGGTAGCCCTTATAAGACAAACCTCGACAATCTTCTCCTCTCTCTCTTCTCTTCCAGCAACCGTAACGGCTACGGCTTTTACAACTCCAACTCCTCCGTTGGAGAAAACTCGGACGAAGTTTATGCACTCGGCCTCTGTAGAGGAGATGTTGAGGCCGTCAACTGCGGTAGTTGCCTCAGCGACGCCAGATATCGTCTCACGGCGGCCTGTCCTGTTCAGAAGGAGGCCATTGGGTGGTACGACGATTGCATGCTACGCTACTCGAATCAATCCATGTATGGGAAGCTGGCATTATCTCCTGCTTTCTATATGTGGAACACAGAAAACGTGTCGTCAACACTTGTGGAGGAGTTCAACCAAAAGCTTCAGCCCTTGTTGGAAAGACTGTCTAGTCAAGCTGCTGAAGGAGGTACTGATCGTAAGTTCGCTGTAGGCTGGCAAAACACAAGCGCCGCCAATGTAACAATATATGGACTCGCACAGTGCACTCCAGATTTGTCAGCCCAAGAATGCACTGAGTGCTTAAAGTCAACTTTAGCAGACTTCCCAGTATGTTGTTTGGGGAAATTTGGTGGGAGAGTTATTGCACCCAGCTGTCACTTAAGGTATGAAATTTACGCATTTTTTGACATTGCAGCTGTGGCACCCACACCTTCGCCACCATTAGCAACACCGGCCTCTCCTCCTTCACTGCTGTCAGGAAAGAAGAAGAGTAATACATCTCGAAGAAAAGTCATCATCACTGTGACAATTGTTGTTCCTCTAGGGGTACTGGTTGTATCCATATCGATTTATTTGAGTTTAGTTAGGAAGACAAAGGAAAATTTTGAAGATCAAATGAGCACAGAAACCTTGCAATTTGACTTTGACTCCATTAGAGTTGCTACAAATAACTTTTCTGAAGCAAATACACTTGGGCGAGGCGGATTTGGTGCTGTTTACAAGGGTAGGCTTTGGAACGAAGAAGATATAGCAGTGAAAAGACTTTCTAAAGATTCTGCACAAGGAGACATTGAATTTAAAAATGAGGTGATCTTAGTGGCCAAGCTTCAACACCGGAACTTGGTTAGGCTCCTTGGTTTCTGTCTGGAAAGAAATGAAAGACTTCTTGTCTATGAGTTTGTCCCAAACGCAAGTCTCGATCATTTCATATTTGATCCAGTCAAGCGTGCAGATTTGAATTGGGAAACTCGTTACAAAATCATAGTAGGCATTGGGCGAGGGCTCCTTTACCTTCATGAAGATTCTCGTCTTAGAATTATCCACCGTGATCTCAAAGCCAGTAATATTCTATTAGATGCAGAATTGAATCCCAAGATTGCTGATTTTGGCATGGCAAGATTGTTTAATATCGATCAAACACAAGCTGAAACCAGTCGAGTTGTGGGAACCTATGGATACATGGCACCGGAGTATGTTATACGTGGACACTTTTCTGTGAAGTCTGATGTCTATAGCTTTGGTGTGTTGGTCTTGGAGATAATAAGCGGACAGAAAAATAGTTCATTTCGTCACGAAGGAAAATTGGAGGATCTTCTGGGCTATGCATGGAATAGTTGGAAGGAAGGGATATCTTCAAACTTGATAGATCCCATGTTGAGAACCGGTTCAAGGCCGGAAATAATGAGATGCATTCACATCGGACTGTTGTGTGTGCAGCAAAGTATAGCTGATAGGCCAACTATGGCTCTAGTTATTCAAATGCTTACCAGCAACTCTGTTGATCTCCCAGTACCCTCACAACCAGCATTTTTTATGTACAATCATGGCATTGGATCCTCATCCGACATGTCGTTGGGATTTGAGAGTAACTCAGGATTAATAGGGTCTGATCAATCCAAAAGCAACTCTGCCCACAAACCTATACCAACTACCCATTAG

Protein Analysis

668

Amino Acids

74.08

Weight (kDa)

6.45

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 33 - 132 5.9e-25 Salt stress response/antifungal
Stress-antifung PF01657 155 - 247 6.5e-13 Salt stress response/antifungal
Pkinase PF00069 342 - 544 1.7e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 345 - 607 6.9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 138
AasI GACNNNNNNGTC 1 cut(s) 516
AccB1I GGYRCC 2 cut(s) 769, 1531
AccB7I CCANNNNNTGG 1 cut(s) 360
AciI CCGC 7 cut(s) 77, 123, 291, 329, 579, 1050, 1614
AclWI GGATC 5 cut(s) 1277, 1665, 1709, 1896, 1909
AcoI YGGCCR 1 cut(s) 1167
AcsI RAATTY 4 cut(s) 692, 738, 949, 1142
AcuI CTGAAG 3 cut(s) 476, 549, 1047
AcyI GRCGYC 1 cut(s) 309
AdeI CACNNNGTG 1 cut(s) 645
AfaI GTAC 6 cut(s) 89, 365, 538, 897, 1860, 1886
AfiI CCNNNNNNNGG 4 cut(s) 360, 405, 1189, 1737
AflII CTTAAG 1 cut(s) 727
AflIII ACRYGT 2 cut(s) 453, 1914
AgeI ACCGGT 1 cut(s) 1730
AgsI TTSAA 9 cut(s) 481, 956, 1142, 1178, 1306, 1435, 1704, 1737, 1826
AhdI GACNNNNNGTC 1 cut(s) 1235
Alw21I GWGCWC 2 cut(s) 614, 971
Alw26I GTCTC 4 cut(s) 101, 326, 1128, 1268
Alw44I GTGCAC 1 cut(s) 610
AlwI GGATC 5 cut(s) 1277, 1665, 1709, 1896, 1909
AoxI GGCC 8 cut(s) 256, 279, 330, 351, 801, 1167, 1739, 1802
ApaLI GTGCAC 1 cut(s) 610
ApeKI GCWGC 3 cut(s) 524, 761, 1783
ApoI RAATTY 4 cut(s) 692, 738, 949, 1142
AseI ATTAAT 1 cut(s) 1946
AsiGI ACCGGT 1 cut(s) 1730
Asp700I GAANNNNTTC 2 cut(s) 1230, 1732
AspLEI GCGC 1 cut(s) 578
AsuHPI GGTGA 1 cut(s) 1168
BaeGI GKGCMC 1 cut(s) 614
BalI TGGCCA 1 cut(s) 1169
BamHI GGATCC 1 cut(s) 1901
BanI GGYRCC 2 cut(s) 769, 1531
BanII GRGCYC 1 cut(s) 1353
BbsI GAAGAC 1 cut(s) 944
Bbv12I GWGCWC 2 cut(s) 614, 971
BbvCI CCTCAGC 1 cut(s) 302
BbvI GCAGC 3 cut(s) 511, 773, 1795
BceAI ACGGC 4 cut(s) 208, 214, 266, 342
BcgI CGANNNNNNTGC 4 cut(s) 230, 264, 1747, 1781
BciVI GTATCC 2 cut(s) 916, 1517
BclI TGATCA 2 cut(s) 70, 1957
BcoDI GTCTC 4 cut(s) 101, 326, 1128, 1268
BfaI CTAG 3 cut(s) 516, 890, 1817
BfmI CTRYAG 3 cut(s) 262, 555, 1579
BfoI RGCGCY 1 cut(s) 579
BfrI CTTAAG 1 cut(s) 727
BfuI GTATCC 2 cut(s) 916, 1517
BisI GCNGC 5 cut(s) 330, 525, 579, 762, 1784
BlsI GCNGC 5 cut(s) 331, 526, 580, 763, 1785
BmeRI GACNNNNNGTC 1 cut(s) 1235
BmiI GGNNCC 6 cut(s) 771, 1199, 1352, 1516, 1533, 1903
BmrI ACTGGG 2 cut(s) 668, 1850
BmsI GCATC 2 cut(s) 1414, 1745
BmuI ACTGGG 2 cut(s) 668, 1850
BpiI GAAGAC 1 cut(s) 944
BplI GAGNNNNNCTC 2 cut(s) 1922, 1954
BpmI CTGGAG 1 cut(s) 600
Bpu10I CCTNAGC 1 cut(s) 302
BpuEI CTTGAG 1 cut(s) 45
Bsa29I ATCGAT 2 cut(s) 914, 1479
BsaAI YACGTR 1 cut(s) 1550
BsaBI GATNNNNATC 1 cut(s) 1906
BsaHI GRCGYC 1 cut(s) 309
BsaJI CCNNGG 1 cut(s) 1201
BsaWI WCCGGW 3 cut(s) 1182, 1534, 1730
BsaXI ACNNNNNCTCC 4 cut(s) 200, 230, 980, 1010
Bsc4I CCNNNNNNNGG 4 cut(s) 360, 405, 1189, 1737
Bse118I RCCGGY 2 cut(s) 799, 1730
Bse1I ACTGG 6 cut(s) 674, 903, 1286, 1407, 1500, 1856
Bse3DI GCAATG 1 cut(s) 756
Bse8I GATNNNNATC 1 cut(s) 1906
BseCI ATCGAT 2 cut(s) 914, 1479
BseDI CCNNGG 1 cut(s) 1201
BseGI GGATG 1 cut(s) 1907
BseJI GATNNNNATC 1 cut(s) 1906
BseLI CCNNNNNNNGG 4 cut(s) 360, 405, 1189, 1737
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 3 cut(s) 316, 633, 1953
BseNI ACTGG 6 cut(s) 674, 903, 1286, 1407, 1500, 1856
BseRI GAGGAG 5 cut(s) 152, 208, 282, 488, 798
BseSI GKGCMC 1 cut(s) 614
BseXI GCAGC 3 cut(s) 511, 773, 1795
BseYI CCCAGC 1 cut(s) 716
BsgI GTGCAG 3 cut(s) 1110, 1317, 1802
BshFI GGCC 8 cut(s) 258, 281, 332, 353, 803, 1169, 1741, 1804
BshNI GGYRCC 2 cut(s) 769, 1531
BshTI ACCGGT 1 cut(s) 1730
BshVI ATCGAT 2 cut(s) 914, 1479
BsiHKAI GWGCWC 2 cut(s) 614, 971
BsiSI CCGG 5 cut(s) 800, 1183, 1535, 1731, 1742
BslFI GGGAC 1 cut(s) 1235
BslI CCNNNNNNNGG 4 cut(s) 360, 405, 1189, 1737
BsmAI GTCTC 4 cut(s) 101, 326, 1128, 1268
BsmBI CGTCTC 1 cut(s) 326
BsmFI GGGAC 1 cut(s) 1235
BsmI GAATGC 2 cut(s) 641, 1758
BsnI GGCC 8 cut(s) 258, 281, 332, 353, 803, 1169, 1741, 1804
Bsp1286I GDGCHC 3 cut(s) 614, 971, 1353
Bsp1407I TGTACA 2 cut(s) 87, 1884
BspACI CCGC 7 cut(s) 77, 123, 291, 329, 579, 1050, 1614
BspANI GGCC 8 cut(s) 258, 281, 332, 353, 803, 1169, 1741, 1804
BspCNI CTCAG 3 cut(s) 315, 634, 1952
BspDI ATCGAT 2 cut(s) 914, 1479
BspHI TCATGA 1 cut(s) 1363
BspLI GGNNCC 6 cut(s) 771, 1199, 1352, 1516, 1533, 1903
BspPI GGATC 5 cut(s) 1277, 1665, 1709, 1896, 1909
BspT107I GGYRCC 2 cut(s) 769, 1531
BspTI CTTAAG 1 cut(s) 727
BsrDI GCAATG 1 cut(s) 756
BsrFI RCCGGY 2 cut(s) 799, 1730
BsrGI TGTACA 2 cut(s) 87, 1884
BsrI ACTGG 6 cut(s) 674, 903, 1286, 1407, 1500, 1856
BssAI RCCGGY 2 cut(s) 799, 1730
BssECI CCNNGG 1 cut(s) 1201
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 1 cut(s) 1201
Bst4CI ACNGT 6 cut(s) 188, 513, 609, 871, 1394, 1773
Bst6I CTCTTC 3 cut(s) 176, 181, 830
BstACI GRCGYC 1 cut(s) 309
BstAFI CTTAAG 1 cut(s) 727
BstAPI GCANNNNNTGC 1 cut(s) 645
BstAUI TGTACA 2 cut(s) 87, 1884
BstBAI YACGTR 1 cut(s) 1550
BstC8I GCNNGC 4 cut(s) 377, 414, 563, 1296
BstDEI CTNAG 5 cut(s) 302, 642, 1162, 1379, 1939
BstF5I GGATG 1 cut(s) 1907
BstH2I RGCGCY 1 cut(s) 579
BstHHI GCGC 1 cut(s) 578
BstMAI GTCTC 4 cut(s) 101, 326, 1128, 1268
BstMWI GCNNNNNNNGC 5 cut(s) 297, 381, 645, 767, 800
BstNSI RCATGY 2 cut(s) 379, 1918
BstSFI CTRYAG 3 cut(s) 262, 555, 1579
BstSLI GKGCMC 1 cut(s) 614
BstV1I GCAGC 3 cut(s) 511, 773, 1795
BstV2I GAAGAC 1 cut(s) 944
BstX2I RGATCY 3 cut(s) 1657, 1714, 1901
BstYI RGATCY 3 cut(s) 1657, 1714, 1901
Bsu15I ATCGAT 2 cut(s) 914, 1479
BsuI GTATCC 2 cut(s) 916, 1517
BsuRI GGCC 8 cut(s) 258, 281, 332, 353, 803, 1169, 1741, 1804
BsuTUI ATCGAT 2 cut(s) 914, 1479
BtsCI GGATG 1 cut(s) 1907
BtsI GCAGTG 2 cut(s) 815, 1107
BtsIMutI CAGTG 5 cut(s) 614, 639, 815, 867, 1107
Cac8I GCNNGC 4 cut(s) 377, 414, 563, 1296
CciI TCATGA 1 cut(s) 1363
CfoI GCGC 1 cut(s) 578
Cfr10I RCCGGY 2 cut(s) 799, 1730
ClaI ATCGAT 2 cut(s) 914, 1479
CseI GACGC 1 cut(s) 317
Csp6I GTAC 6 cut(s) 88, 364, 537, 896, 1859, 1885
CspAI ACCGGT 1 cut(s) 1730
CspCI CAANNNNNGTGG 2 cut(s) 450, 485
CviAII CATG 9 cut(s) 376, 400, 1364, 1459, 1528, 1674, 1720, 1892, 1915
CviQI GTAC 6 cut(s) 88, 364, 537, 896, 1859, 1885
DdeI CTNAG 5 cut(s) 302, 642, 1162, 1379, 1939
DraI TTTAAA 1 cut(s) 1147
DraIII CACNNNGTG 1 cut(s) 645
DrdI GACNNNNNNGTC 1 cut(s) 516
DriI GACNNNNNGTC 1 cut(s) 1235
DseDI GACNNNNNNGTC 1 cut(s) 516
EaeI YGGCCR 1 cut(s) 1167
Eam1104I CTCTTC 3 cut(s) 176, 181, 830
Eam1105I GACNNNNNGTC 1 cut(s) 1235
EarI CTCTTC 3 cut(s) 176, 181, 830
EciI GGCGGA 1 cut(s) 1065
Eco130I CCWWGG 1 cut(s) 1201
Eco24I GRGCYC 1 cut(s) 1353
Eco32I GATATC 2 cut(s) 317, 1698
Eco57I CTGAAG 3 cut(s) 476, 549, 1047
EcoRV GATATC 2 cut(s) 317, 1698
EcoT14I CCWWGG 1 cut(s) 1201
EcoT22I ATGCAT 2 cut(s) 1675, 1760
EcoT38I GRGCYC 1 cut(s) 1353
ErhI CCWWGG 1 cut(s) 1201
Esp3I CGTCTC 1 cut(s) 326
FaeI CATG 9 cut(s) 379, 403, 1367, 1462, 1531, 1677, 1723, 1895, 1918
FaqI GGGAC 1 cut(s) 1235
FatI CATG 9 cut(s) 375, 399, 1363, 1458, 1527, 1673, 1719, 1891, 1914
FbaI TGATCA 2 cut(s) 70, 1957
Fnu4HI GCNGC 5 cut(s) 330, 525, 579, 762, 1784
FokI GGATG 1 cut(s) 1894
FriOI GRGCYC 1 cut(s) 1353
Fsp4HI GCNGC 5 cut(s) 330, 525, 579, 762, 1784
FspBI CTAG 3 cut(s) 516, 890, 1817
GlaI GCGC 1 cut(s) 577
GluI GCNGC 5 cut(s) 330, 525, 579, 762, 1784
GsaI CCCAGC 1 cut(s) 720
GsuI CTGGAG 1 cut(s) 600
HaeII RGCGCY 1 cut(s) 579
HaeIII GGCC 8 cut(s) 258, 281, 332, 353, 803, 1169, 1741, 1804
HapII CCGG 5 cut(s) 800, 1183, 1535, 1731, 1742
HgaI GACGC 1 cut(s) 317
HhaI GCGC 1 cut(s) 578
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 9 cut(s) 379, 403, 1367, 1462, 1531, 1677, 1723, 1895, 1918
Hin6I GCGC 1 cut(s) 576
HinP1I GCGC 1 cut(s) 576
HincII GTYRAC 3 cut(s) 286, 462, 657
HindII GTYRAC 3 cut(s) 286, 462, 657
HindIII AAGCTT 3 cut(s) 13, 488, 1172
HinfI GANTC 6 cut(s) 391, 600, 995, 1121, 1370, 1435
HpaII CCGG 5 cut(s) 800, 1183, 1535, 1731, 1742
HphI GGTGA 1 cut(s) 1168
Hpy166II GTNNAC 6 cut(s) 286, 462, 612, 657, 1066, 1553
Hpy188I TCNGA 7 cut(s) 238, 345, 1027, 1573, 1769, 1912, 1957
Hpy188III TCNNGA 8 cut(s) 617, 825, 849, 1214, 1265, 1364, 1640, 1941
Hpy8I GTNNAC 6 cut(s) 286, 462, 612, 657, 1066, 1553
Hpy99I CGWCG 2 cut(s) 311, 371
HpyAV CCTTC 8 cut(s) 340, 524, 789, 822, 1370, 1637, 1681, 1685
HpyCH4III ACNGT 6 cut(s) 188, 513, 609, 871, 1394, 1773
HpyCH4IV ACGT 2 cut(s) 453, 1549
HpyF10VI GCNNNNNNNGC 5 cut(s) 297, 381, 645, 767, 800
HpyF3I CTNAG 5 cut(s) 302, 642, 1162, 1379, 1939
HpySE526I ACGT 2 cut(s) 453, 1549
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 9 cut(s) 379, 403, 1367, 1462, 1531, 1677, 1723, 1895, 1918
HspAI GCGC 1 cut(s) 576
Ksp22I TGATCA 2 cut(s) 70, 1957
LmnI GCTCC 2 cut(s) 1203, 1356
Lsp1109I GCAGC 3 cut(s) 511, 773, 1795
LweI GCATC 2 cut(s) 1414, 1745
MaeI CTAG 3 cut(s) 516, 890, 1817
MaeII ACGT 2 cut(s) 453, 1549
MaeIII GTNAC 8 cut(s) 113, 188, 586, 722, 871, 1319, 1637, 1934
MfeI CAATTG 1 cut(s) 876
MflI RGATCY 3 cut(s) 1657, 1714, 1901
MhlI GDGCHC 3 cut(s) 614, 971, 1353
MlsI TGGCCA 1 cut(s) 1169
MluNI TGGCCA 1 cut(s) 1169
MlyI GAGTC 2 cut(s) 594, 989
MmeI TCCRAC 5 cut(s) 205, 237, 483, 1664, 1935
Mox20I TGGCCA 1 cut(s) 1169
Mph1103I ATGCAT 2 cut(s) 1675, 1760
MroXI GAANNNNTTC 2 cut(s) 1230, 1732
MscI TGGCCA 1 cut(s) 1169
MseI TTAA 5 cut(s) 650, 728, 1146, 1473, 1946
MslI CAYNNNNRTG 1 cut(s) 869
Msp20I TGGCCA 1 cut(s) 1169
MspA1I CMGCKG 3 cut(s) 125, 720, 764
MspCI CTTAAG 1 cut(s) 727
MspI CCGG 5 cut(s) 800, 1183, 1535, 1731, 1742
MunI CAATTG 1 cut(s) 876
Mva1269I GAATGC 2 cut(s) 641, 1758
MwoI GCNNNNNNNGC 5 cut(s) 297, 381, 645, 767, 800
NlaIII CATG 9 cut(s) 379, 403, 1367, 1462, 1531, 1677, 1723, 1895, 1918
NlaIV GGNNCC 6 cut(s) 771, 1199, 1352, 1516, 1533, 1903
NmeAIII GCCGAG 1 cut(s) 234
NmuCI GTSAC 3 cut(s) 722, 871, 1637
NsiI ATGCAT 2 cut(s) 1675, 1760
NspI RCATGY 2 cut(s) 379, 1918
PaeI GCATGC 1 cut(s) 379
PagI TCATGA 1 cut(s) 1363
PciI ACATGT 1 cut(s) 1914
PcsI WCGNNNNNNNCGW 1 cut(s) 1263
PctI GAATGC 2 cut(s) 641, 1758
PdmI GAANNNNTTC 2 cut(s) 1230, 1732
PfeI GAWTC 4 cut(s) 391, 1121, 1370, 1435
PflMI CCANNNNNTGG 1 cut(s) 360
PinAI ACCGGT 1 cut(s) 1730
PkrI GCNGC 5 cut(s) 331, 526, 580, 763, 1785
PleI GAGTC 2 cut(s) 594, 989
PpsI GAGTC 2 cut(s) 594, 989
Ppu21I YACGTR 1 cut(s) 1550
PscI ACATGT 1 cut(s) 1914
PshBI ATTAAT 1 cut(s) 1946
PsiI TTATAA 1 cut(s) 138
PspFI CCCAGC 1 cut(s) 716
PspN4I GGNNCC 6 cut(s) 771, 1199, 1352, 1516, 1533, 1903
PsuI RGATCY 3 cut(s) 1657, 1714, 1901
PvuII CAGCTG 2 cut(s) 720, 764
RsaI GTAC 6 cut(s) 89, 365, 538, 897, 1860, 1886
RsaNI GTAC 6 cut(s) 88, 364, 537, 896, 1859, 1885
RseI CAYNNNNRTG 1 cut(s) 869
SaqAI TTAA 5 cut(s) 650, 728, 1146, 1473, 1946
SatI GCNGC 5 cut(s) 330, 525, 579, 762, 1784
SchI GAGTC 2 cut(s) 594, 989
SduI GDGCHC 3 cut(s) 614, 971, 1353
SfaNI GCATC 2 cut(s) 1414, 1745
SfcI CTRYAG 3 cut(s) 262, 555, 1579
SmiMI CAYNNNNRTG 1 cut(s) 869
SmlI CTYRAG 2 cut(s) 60, 727
SmoI CTYRAG 2 cut(s) 60, 727
SphI GCATGC 1 cut(s) 379
SsiI CCGC 7 cut(s) 77, 123, 291, 329, 579, 1050, 1614
SspI AATATT 1 cut(s) 1414
SspMI CTAG 3 cut(s) 516, 890, 1817
StyI CCWWGG 1 cut(s) 1201
TaaI ACNGT 6 cut(s) 188, 513, 609, 871, 1394, 1773
TaiI ACGT 2 cut(s) 456, 1552
TaqI TCGA 7 cut(s) 150, 389, 850, 914, 1266, 1479, 1504
TatI WGTACW 2 cut(s) 87, 1884
TauI GCSGC 2 cut(s) 332, 581
TfiI GAWTC 4 cut(s) 391, 1121, 1370, 1435
Tru1I TTAA 5 cut(s) 650, 728, 1146, 1473, 1946
Tru9I TTAA 5 cut(s) 650, 728, 1146, 1473, 1946
TscAI CASTG 5 cut(s) 614, 646, 822, 874, 1107
TseFI GTSAC 3 cut(s) 722, 871, 1637
TseI GCWGC 3 cut(s) 524, 761, 1783
Tsp45I GTSAC 3 cut(s) 722, 871, 1637
TspDTI ATGAA 8 cut(s) 17, 21, 750, 1239, 1264, 1352, 1380, 1620
TspGWI ACGGA 1 cut(s) 211
TspRI CASTG 5 cut(s) 614, 646, 822, 874, 1107
Van91I CCANNNNNTGG 1 cut(s) 360
Vha464I CTTAAG 1 cut(s) 727
VneI GTGCAC 1 cut(s) 610
VspI ATTAAT 1 cut(s) 1946
XapI RAATTY 4 cut(s) 692, 738, 949, 1142
XceI RCATGY 2 cut(s) 379, 1918
XcmI CCANNNNNNNNNTGG 1 cut(s) 1507
XmnI GAANNNNTTC 2 cut(s) 1230, 1732
XspI CTAG 3 cut(s) 516, 890, 1817
Zsp2I ATGCAT 2 cut(s) 1675, 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.