Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

23140210 .. 23144548

Gene Structure 4339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g29871.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGATTTCCCATCAACATTTGGGTTCTTCTTGTCGATTATACTTGTGTTGCTCCTAGCTCAAGCCGATCAGTCACCTTTCATATACAACTTTTGCGGCCAGAACGGTAACTACACCGCAAATAGCACCTATCAGACAAACCTCAACAGCCTTCTCGGTTCTCTTTCCTCTCCCGGCAACGACAACGGCTACGGTTTCTACAGTTCCTCCGTCGGAGCAAACTCCGATAAAGTAAACGCATTTGGCCTCTGCAGAGGAGATGTCAAGGCCGATGACTGTGAAAGCTGCGTCAGCCAAGCTAGTGATCCTCTCAAAAAAGCTTGCCCTGTCCAGAAGGAGGCTATTATATGGTACGACTATTGCATGTTACGCTACTCGAATGAAACGTTATATGGCATCGTGACAACATTCCCTGCTGTGTTTTTGTCTAATGTACAAAACGTTTCGTCGCCGGAGGAGTTCAATCGGCAGCTGAAGTTGTTATGGGAAGGATTGATTACTGAAGCTGCTGCAGGAGGTACTGATCGGAAGTTTGCAAAAGGCACAAACACAACCGCCAGCCTTGTGAAAATATATGGATTTGCACAGTGTACTCCAGATTTGTCGCCGGAAGAGTGCACTCAATGCTTAGATGCAGCTTTAGAGCAGATCCCATTATTTAGTTATGGGAAAATTGGTGGGAATGCTGTTGCACCTAGTTGTATCTTGAGATATGAAATTCGCAACTTCTTTTACCCCACAAGTGAGGCATCCGCTCCATCTCCACAGTTGGAAACACCAGCCTCTCCTTCTCCACCACCACCGTCAGGAAAGAAGAATAATACATCCCGAAACGTCATCATTGCTGTGACAATCATTGTATCTCTGGTACTGATTTCATTGGCGATTTGGATTTATCTGAGATTTTGGAAGAGAAACAGACCACCGGAAGCCGATGAAGTTATGAGCGCAGAAGCCTTGCAATTCGAGTTTGAGTCCATTAGGGTTGCTACACATAACTTTTCTGAAGCAAATACGCTTGGACGAGGCGGATTTGGTGCTGTTTATAGGGGTAGGCTTTGGAACGAAGAGGAGATTGCAGTGAAAAGGCTCTCGAGAGATTCTGCACAAGGAGACGTAGAATTTAAAAACGAGGTGTTGCTAGTAGCAAAGCTTCAACATCGAAATCTAGTTAGGCTGCTTGGTTTCTGTCTAGAGAGAAATGAAAGACTTCTTGTCTATGAGTTTGTCCCAAATGCAAGCCTTGATCAATTCATATTTGATCCAATCAAGCGTGAACAACTAGACTGGGATATTCGCTACAAGATCATTGTAGGCATTGCGCGAGGGCTCCTTTACCTTCATGAAGATTCTCGTCTTAGAATCATCCATCGCGATCTCAAAGCAAGTAACATTTTATTAGATGCAGAAATGAACCCCAAAATTGCAGATTTTGGCATGGCAAGATTGTTTAATATCGATCAAACACAAGGCGAAACCAGTCGAGTTGTGGGAACCTACGGATATATGGCTCCTGAGTATGTAATGCGTGGACATTTTTCTGTGAAGTCCGATGTCTATAGCTTTGGTGTGTTAGTTTTGGAGATAGTAAGTGGACAGAAAAACAGCTCCTTTTGTCATGAAGGAAATTTGGAGGATCTTCTTGGCTATGCATGGAATAGTTGGAAGCAGGGGACATCTTCAAATTTGATAGATCCCATGTTGAGGACTGGATCAAGGACTGAAATAGTGAGATGCATCCGTATTGGATTATTATGTGTTCAACAAAGCATAAGTGACAGACCAACCATGGCTGCAGTTACGCAAATGCTTACCAGCAACTCTGTTGATCTCCCAGTGCCTTCACAACCAGCATACTTTATGTACAGTCATGGCATTGGATCCTCATCCGACATGTCGTTGGGGTTTGAGAGTTACTCAGGATTAACGGGGTCTGATCAATCTAAAAGCCACTCTGCCCATAAACCTATATATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

660

Amino Acids

73.12

Weight (kDa)

5.65

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	32 - 128	1.7e-27	Salt stress response/antifungal
Stress-antifung	PF01657	146 - 239	1.1e-10	Salt stress response/antifungal
Pkinase	PF00069	336 - 536	5.1e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	339 - 604	2.5e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	755
AccII	CGCG	2 cut(s)	1324, 1374
AciI	CCGC	5 cut(s)	96, 117, 555, 753, 1029
AclI	AACGTT	2 cut(s)	386, 441
AclWI	GGATC	8 cut(s)	299, 643, 1256, 1644, 1688, 1720, 1875, 1888
AcoI	YGGCCR	1 cut(s)	97
AcsI	RAATTY	4 cut(s)	717, 1121, 1627, 1684
AcuI	CTGAAG	3 cut(s)	494, 522, 1026
AfaI	GTAC	6 cut(s)	353, 435, 520, 592, 870, 1865
AfiI	CCNNNNNNNGG	3 cut(s)	337, 806, 1704
AflIII	ACRYGT	1 cut(s)	1893
AgsI	TTSAA	4 cut(s)	463, 1157, 1683, 1763
AhdI	GACNNNNNGTC	1 cut(s)	1214
Alw21I	GWGCWC	1 cut(s)	620
Alw26I	GTCTC	1 cut(s)	1107
Alw44I	GTGCAC	1 cut(s)	616
AlwI	GGATC	8 cut(s)	299, 643, 1256, 1644, 1688, 1720, 1875, 1888
Ama87I	CYCGRG	1 cut(s)	1093
AoxI	GGCC	3 cut(s)	97, 244, 267
ApaLI	GTGCAC	1 cut(s)	616
ApeKI	GCWGC	7 cut(s)	285, 469, 506, 509, 635, 1177, 1793
ApoI	RAATTY	4 cut(s)	717, 1121, 1627, 1684
Asp700I	GAANNNNTTC	1 cut(s)	1209
AspLEI	GCGC	2 cut(s)	950, 1324
AsuC2I	CCSGG	1 cut(s)	174
AsuHPI	GGTGA	1 cut(s)	66
AvaI	CYCGRG	1 cut(s)	1093
BaeGI	GKGCMC	1 cut(s)	620
BamHI	GGATCC	1 cut(s)	1880
BanII	GRGCYC	1 cut(s)	1332
BarI	GAAGNNNNNNTAC	2 cut(s)	1137, 1169
Bbv12I	GWGCWC	1 cut(s)	620
BbvI	GCAGC	7 cut(s)	272, 481, 493, 496, 647, 1164, 1780
BccI	CCATC	3 cut(s)	19, 766, 1377
BceAI	ACGGC	1 cut(s)	202
BclI	TGATCA	2 cut(s)	1246, 1936
BcnI	CCSGG	1 cut(s)	174
BcoDI	GTCTC	1 cut(s)	1107
BfaI	CTAG	7 cut(s)	56, 300, 696, 1142, 1169, 1193, 1283
BfmI	CTRYAG	5 cut(s)	199, 250, 510, 1558, 1794
BisI	GCNGC	8 cut(s)	97, 286, 470, 507, 510, 636, 1178, 1794
BlsI	GCNGC	8 cut(s)	98, 287, 471, 508, 511, 637, 1179, 1795
Bme1390I	CCNGG	1 cut(s)	174
BmeRI	GACNNNNNGTC	1 cut(s)	1214
BmeT110I	CYCGRG	1 cut(s)	1093
BmiI	GGNNCC	4 cut(s)	1331, 1495, 1512, 1882
BmrFI	CCNGG	1 cut(s)	174
BmrI	ACTGGG	2 cut(s)	1297, 1829
BmsI	GCATC	6 cut(s)	405, 622, 758, 1393, 1724, 1746
BmuI	ACTGGG	2 cut(s)	1297, 1829
BplI	GAGNNNNNCTC	2 cut(s)	1901, 1933
BpmI	CTGGAG	1 cut(s)	579
BpuEI	CTTGAG	2 cut(s)	45, 727
BpuMI	CCSGG	1 cut(s)	174
Bsa29I	ATCGAT	1 cut(s)	1458
BsaBI	GATNNNNATC	1 cut(s)	1885
BsaJI	CCNNGG	1 cut(s)	1788
BsaWI	WCCGGW	1 cut(s)	925
BsaXI	ACNNNNNCTCC	2 cut(s)	191, 221
Bsc4I	CCNNNNNNNGG	3 cut(s)	337, 806, 1704
Bse1I	ACTGG	4 cut(s)	1292, 1479, 1714, 1835
Bse3DI	GCAATG	2 cut(s)	840, 1317
Bse8I	GATNNNNATC	1 cut(s)	1885
BseCI	ATCGAT	1 cut(s)	1458
BseDI	CCNNGG	1 cut(s)	1788
BseGI	GGATG	5 cut(s)	749, 824, 1365, 1737, 1886
BseJI	GATNNNNATC	1 cut(s)	1885
BseLI	CCNNNNNNNGG	3 cut(s)	337, 806, 1704
BseMI	GCAATG	2 cut(s)	840, 1317
BseMII	CTCAG	3 cut(s)	890, 1506, 1932
BseNI	ACTGG	4 cut(s)	1292, 1479, 1714, 1835
BseRI	GAGGAG	3 cut(s)	270, 470, 1085
BseSI	GKGCMC	1 cut(s)	620
BseXI	GCAGC	7 cut(s)	272, 481, 493, 496, 647, 1164, 1780
BsgI	GTGCAG	1 cut(s)	1089
Bsh1236I	CGCG	2 cut(s)	1324, 1374
BshFI	GGCC	3 cut(s)	99, 246, 269
BshVI	ATCGAT	1 cut(s)	1458
BsiHKAI	GWGCWC	1 cut(s)	620
BsiHKCI	CYCGRG	1 cut(s)	1093
BsiSI	CCGG	4 cut(s)	174, 452, 608, 926
BslFI	GGGAC	2 cut(s)	1214, 1687
BslI	CCNNNNNNNGG	3 cut(s)	337, 806, 1704
BsmAI	GTCTC	1 cut(s)	1107
BsmBI	CGTCTC	1 cut(s)	1107
BsmFI	GGGAC	2 cut(s)	1214, 1687
BsmI	GAATGC	1 cut(s)	688
BsnI	GGCC	3 cut(s)	99, 246, 269
BsoBI	CYCGRG	1 cut(s)	1093
Bsp1286I	GDGCHC	2 cut(s)	620, 1332
Bsp1407I	TGTACA	2 cut(s)	433, 1863
Bsp19I	CCATGG	1 cut(s)	1788
Bsp68I	TCGCGA	1 cut(s)	1374
BspACI	CCGC	5 cut(s)	96, 117, 555, 753, 1029
BspANI	GGCC	3 cut(s)	99, 246, 269
BspCNI	CTCAG	3 cut(s)	891, 1507, 1931
BspDI	ATCGAT	1 cut(s)	1458
BspFNI	CGCG	2 cut(s)	1324, 1374
BspHI	TCATGA	2 cut(s)	1342, 1618
BspLI	GGNNCC	4 cut(s)	1331, 1495, 1512, 1882
BspMAI	CTGCAG	3 cut(s)	254, 514, 1798
BspPI	GGATC	8 cut(s)	299, 643, 1256, 1644, 1688, 1720, 1875, 1888
BsrBI	CCGCTC	1 cut(s)	755
BsrDI	GCAATG	2 cut(s)	840, 1317
BsrGI	TGTACA	2 cut(s)	433, 1863
BsrI	ACTGG	4 cut(s)	1292, 1479, 1714, 1835
BssECI	CCNNGG	1 cut(s)	1788
BssT1I	CCWWGG	1 cut(s)	1788
Bst4CI	ACNGT	8 cut(s)	107, 194, 203, 278, 588, 768, 804, 1868
Bst6I	CTCTTC	3 cut(s)	606, 905, 1062
BstAPI	GCANNNNNTGC	1 cut(s)	624
BstAUI	TGTACA	2 cut(s)	433, 1863
BstC8I	GCNNGC	3 cut(s)	322, 559, 1240
BstDEI	CTNAG	5 cut(s)	628, 899, 1358, 1515, 1918
BstDSI	CCRYGG	1 cut(s)	1788
BstF5I	GGATG	5 cut(s)	749, 824, 1365, 1737, 1886
BstFNI	CGCG	2 cut(s)	1324, 1374
BstHHI	GCGC	2 cut(s)	950, 1324
BstMAI	GTCTC	1 cut(s)	1107
BstMWI	GCNNNNNNNGC	3 cut(s)	291, 369, 624
BstNSI	RCATGY	2 cut(s)	367, 1897
BstSCI	CCNGG	1 cut(s)	172
BstSFI	CTRYAG	5 cut(s)	199, 250, 510, 1558, 1794
BstSLI	GKGCMC	1 cut(s)	620
BstUI	CGCG	2 cut(s)	1324, 1374
BstV1I	GCAGC	7 cut(s)	272, 481, 493, 496, 647, 1164, 1780
BstX2I	RGATCY	4 cut(s)	648, 1636, 1693, 1880
BstYI	RGATCY	4 cut(s)	648, 1636, 1693, 1880
Bsu15I	ATCGAT	1 cut(s)	1458
BsuRI	GGCC	3 cut(s)	99, 246, 269
BsuTUI	ATCGAT	1 cut(s)	1458
BtgI	CCRYGG	1 cut(s)	1788
BtgZI	GCGATG	1 cut(s)	1355
BtsCI	GGATG	5 cut(s)	749, 824, 1365, 1737, 1886
BtsI	GCAGTG	1 cut(s)	1086
BtsIMutI	CAGTG	3 cut(s)	593, 1086, 1842
BtuMI	TCGCGA	1 cut(s)	1374
Cac8I	GCNNGC	3 cut(s)	322, 559, 1240
CciI	TCATGA	2 cut(s)	1342, 1618
CfoI	GCGC	2 cut(s)	950, 1324
ClaI	ATCGAT	1 cut(s)	1458
CseI	GACGC	1 cut(s)	277
Csp6I	GTAC	6 cut(s)	352, 434, 519, 591, 869, 1864
CviAII	CATG	9 cut(s)	364, 1343, 1438, 1619, 1653, 1699, 1789, 1871, 1894
CviQI	GTAC	6 cut(s)	352, 434, 519, 591, 869, 1864
DdeI	CTNAG	5 cut(s)	628, 899, 1358, 1515, 1918
DraI	TTTAAA	1 cut(s)	1126
DriI	GACNNNNNGTC	1 cut(s)	1214
EaeI	YGGCCR	1 cut(s)	97
Eam1104I	CTCTTC	3 cut(s)	606, 905, 1062
Eam1105I	GACNNNNNGTC	1 cut(s)	1214
EarI	CTCTTC	3 cut(s)	606, 905, 1062
EciI	GGCGGA	1 cut(s)	1044
Eco130I	CCWWGG	1 cut(s)	1788
Eco24I	GRGCYC	1 cut(s)	1332
Eco57I	CTGAAG	3 cut(s)	494, 522, 1026
Eco88I	CYCGRG	1 cut(s)	1093
EcoT14I	CCWWGG	1 cut(s)	1788
EcoT22I	ATGCAT	2 cut(s)	1654, 1739
EcoT38I	GRGCYC	1 cut(s)	1332
ErhI	CCWWGG	1 cut(s)	1788
Esp3I	CGTCTC	1 cut(s)	1107
FaeI	CATG	9 cut(s)	367, 1346, 1441, 1622, 1656, 1702, 1792, 1874, 1897
FaqI	GGGAC	2 cut(s)	1214, 1687
FatI	CATG	9 cut(s)	363, 1342, 1437, 1618, 1652, 1698, 1788, 1870, 1893
FbaI	TGATCA	2 cut(s)	1246, 1936
Fnu4HI	GCNGC	8 cut(s)	97, 286, 470, 507, 510, 636, 1178, 1794
FokI	GGATG	5 cut(s)	736, 811, 1352, 1724, 1873
FriOI	GRGCYC	1 cut(s)	1332
Fsp4HI	GCNGC	8 cut(s)	97, 286, 470, 507, 510, 636, 1178, 1794
FspBI	CTAG	7 cut(s)	56, 300, 696, 1142, 1169, 1193, 1283
GlaI	GCGC	2 cut(s)	949, 1323
GluI	GCNGC	8 cut(s)	97, 286, 470, 507, 510, 636, 1178, 1794
GsuI	CTGGAG	1 cut(s)	579
HaeIII	GGCC	3 cut(s)	99, 246, 269
HapII	CCGG	4 cut(s)	174, 452, 608, 926
HgaI	GACGC	1 cut(s)	277
HhaI	GCGC	2 cut(s)	950, 1324
Hin1II	CATG	9 cut(s)	367, 1346, 1441, 1622, 1656, 1702, 1792, 1874, 1897
Hin6I	GCGC	2 cut(s)	948, 1322
HinP1I	GCGC	2 cut(s)	948, 1322
HindIII	AAGCTT	2 cut(s)	318, 1151
HinfI	GANTC	4 cut(s)	974, 1100, 1349, 1362
HpaII	CCGG	4 cut(s)	174, 452, 608, 926
HphI	GGTGA	1 cut(s)	66
Hpy166II	GTNNAC	6 cut(s)	235, 591, 618, 1277, 1532, 1595
Hpy188I	TCNGA	9 cut(s)	135, 215, 226, 528, 900, 1006, 1552, 1891, 1936
Hpy8I	GTNNAC	6 cut(s)	235, 591, 618, 1277, 1532, 1595
Hpy99I	CGWCG	2 cut(s)	215, 451
HpyAV	CCTTC	7 cut(s)	161, 328, 482, 798, 1349, 1616, 1851
HpyCH4III	ACNGT	8 cut(s)	107, 194, 203, 278, 588, 768, 804, 1868
HpyCH4IV	ACGT	4 cut(s)	386, 441, 834, 1116
HpyF10VI	GCNNNNNNNGC	3 cut(s)	291, 369, 624
HpyF3I	CTNAG	5 cut(s)	628, 899, 1358, 1515, 1918
HpySE526I	ACGT	4 cut(s)	386, 441, 834, 1116
Hsp92II	CATG	9 cut(s)	367, 1346, 1441, 1622, 1656, 1702, 1792, 1874, 1897
HspAI	GCGC	2 cut(s)	948, 1322
Ksp22I	TGATCA	2 cut(s)	1246, 1936
LmnI	GCTCC	6 cut(s)	57, 215, 760, 1335, 1516, 1613
Lsp1109I	GCAGC	7 cut(s)	272, 481, 493, 496, 647, 1164, 1780
LweI	GCATC	6 cut(s)	405, 622, 758, 1393, 1724, 1746
MaeI	CTAG	7 cut(s)	56, 300, 696, 1142, 1169, 1193, 1283
MaeII	ACGT	4 cut(s)	386, 441, 834, 1116
MaeIII	GTNAC	9 cut(s)	72, 107, 366, 400, 847, 1388, 1775, 1798, 1913
MbiI	CCGCTC	1 cut(s)	755
MboII	GAAGA	8 cut(s)	19, 623, 826, 922, 1079, 1358, 1631, 1671
MflI	RGATCY	4 cut(s)	648, 1636, 1693, 1880
MhlI	GDGCHC	2 cut(s)	620, 1332
MluCI	AATT	8 cut(s)	672, 717, 962, 1121, 1250, 1422, 1627, 1684
MlyI	GAGTC	1 cut(s)	983
MmeI	TCCRAC	4 cut(s)	193, 750, 1643, 1914
Mph1103I	ATGCAT	2 cut(s)	1654, 1739
MroXI	GAANNNNTTC	1 cut(s)	1209
MseI	TTAA	3 cut(s)	1125, 1452, 1925
MslI	CAYNNNNRTG	1 cut(s)	845
MspA1I	CMGCKG	1 cut(s)	472
MspI	CCGG	4 cut(s)	174, 452, 608, 926
MspR9I	CCNGG	1 cut(s)	174
Mva1269I	GAATGC	1 cut(s)	688
MvnI	CGCG	2 cut(s)	1324, 1374
MwoI	GCNNNNNNNGC	3 cut(s)	291, 369, 624
NciI	CCSGG	1 cut(s)	174
NcoI	CCATGG	1 cut(s)	1788
NlaIII	CATG	9 cut(s)	367, 1346, 1441, 1622, 1656, 1702, 1792, 1874, 1897
NlaIV	GGNNCC	4 cut(s)	1331, 1495, 1512, 1882
NmuCI	GTSAC	4 cut(s)	72, 400, 847, 1775
NruI	TCGCGA	1 cut(s)	1374
NsiI	ATGCAT	2 cut(s)	1654, 1739
NspI	RCATGY	2 cut(s)	367, 1897
PaeR7I	CTCGAG	1 cut(s)	1093
PagI	TCATGA	2 cut(s)	1342, 1618
PciI	ACATGT	1 cut(s)	1893
PcsI	WCGNNNNNNNCGW	1 cut(s)	383
PctI	GAATGC	1 cut(s)	688
PdmI	GAANNNNTTC	1 cut(s)	1209
PfeI	GAWTC	3 cut(s)	1100, 1349, 1362
PkrI	GCNGC	8 cut(s)	98, 287, 471, 508, 511, 637, 1179, 1795
PleI	GAGTC	1 cut(s)	982
PpsI	GAGTC	1 cut(s)	982
PscI	ACATGT	1 cut(s)	1893
Psp1406I	AACGTT	2 cut(s)	386, 441
PspN4I	GGNNCC	4 cut(s)	1331, 1495, 1512, 1882
PsrI	GAACNNNNNNTAC	2 cut(s)	95, 127
PstI	CTGCAG	3 cut(s)	254, 514, 1798
PsuI	RGATCY	4 cut(s)	648, 1636, 1693, 1880
PvuII	CAGCTG	1 cut(s)	472
RruI	TCGCGA	1 cut(s)	1374
RsaI	GTAC	6 cut(s)	353, 435, 520, 592, 870, 1865
RsaNI	GTAC	6 cut(s)	352, 434, 519, 591, 869, 1864
RseI	CAYNNNNRTG	1 cut(s)	845
SaqAI	TTAA	3 cut(s)	1125, 1452, 1925
SatI	GCNGC	8 cut(s)	97, 286, 470, 507, 510, 636, 1178, 1794
SchI	GAGTC	1 cut(s)	983
ScrFI	CCNGG	1 cut(s)	174
SduI	GDGCHC	2 cut(s)	620, 1332
SfaNI	GCATC	6 cut(s)	405, 622, 758, 1393, 1724, 1746
SfcI	CTRYAG	5 cut(s)	199, 250, 510, 1558, 1794
Sfr274I	CTCGAG	1 cut(s)	1093
SlaI	CTCGAG	1 cut(s)	1093
SmiMI	CAYNNNNRTG	1 cut(s)	845
SmlI	CTYRAG	3 cut(s)	60, 706, 1093
SmoI	CTYRAG	3 cut(s)	60, 706, 1093
Sse9I	AATT	8 cut(s)	672, 717, 962, 1121, 1250, 1422, 1627, 1684
SsiI	CCGC	5 cut(s)	96, 117, 555, 753, 1029
SspMI	CTAG	7 cut(s)	56, 300, 696, 1142, 1169, 1193, 1283
StyD4I	CCNGG	1 cut(s)	172
StyI	CCWWGG	1 cut(s)	1788
TaaI	ACNGT	8 cut(s)	107, 194, 203, 278, 588, 768, 804, 1868
TaiI	ACGT	4 cut(s)	389, 444, 837, 1119
TaqI	TCGA	7 cut(s)	35, 377, 966, 1094, 1162, 1458, 1483
TasI	AATT	8 cut(s)	672, 717, 962, 1121, 1250, 1422, 1627, 1684
TatI	WGTACW	3 cut(s)	433, 590, 1863
TauI	GCSGC	1 cut(s)	99
TfiI	GAWTC	3 cut(s)	1100, 1349, 1362
Tru1I	TTAA	3 cut(s)	1125, 1452, 1925
Tru9I	TTAA	3 cut(s)	1125, 1452, 1925
TscAI	CASTG	3 cut(s)	593, 1086, 1842
TseFI	GTSAC	4 cut(s)	72, 400, 847, 1775
TseI	GCWGC	7 cut(s)	285, 469, 506, 509, 635, 1177, 1793
Tsp45I	GTSAC	4 cut(s)	72, 400, 847, 1775
TspGWI	ACGGA	3 cut(s)	199, 1515, 1730
TspRI	CASTG	3 cut(s)	593, 1086, 1842
VneI	GTGCAC	1 cut(s)	616
XapI	RAATTY	4 cut(s)	717, 1121, 1627, 1684
XbaI	TCTAGA	1 cut(s)	1192
XceI	RCATGY	2 cut(s)	367, 1897
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1486
XhoI	CTCGAG	1 cut(s)	1093
XmnI	GAANNNNTTC	1 cut(s)	1209
XspI	CTAG	7 cut(s)	56, 300, 696, 1142, 1169, 1193, 1283
Zsp2I	ATGCAT	2 cut(s)	1654, 1739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.