Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

23116632 .. 23120350

Gene Structure 3719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g29870.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGTTTCCTCATCATCAAGCTTTGGATTTGTTTTTTCATTGATACTACTGGTGTTGCTCGCAGCTCAAACCGATCTTCAACCCCCTTTTGTGTCCTTCTGTAACGTCACAGGTAACTACACCGCTGCTAGCGCTTACAAGGCAAACCTCGACGCTCTTCTCCCATTTCTCGCTAATTCCGGCAACGCTAATGGCTCCGGCTTCTACATGTCCTCCGGTGGGGAAAACTCCGACCAAGTGTATGCACTGGGGCTCTGTAGAGGAGATGTTGATGTCGCCGGCTGCGGCAATTGCATCGGCAACATGATACAGTCTCTCAAGAATGATTGTCCTGTTCAGAAGGAGGCCATTGGGTGGTACGACAATTGCATGCTACGCTACTCAAAGCAACCCATGTATGGGCACCTCACAACATTTCCTGCTTACAGCATGTTGGGCACAGAAAACATATCGGCAACAATTGAGGATGAGTTCAACCAAAAGCTTCAAGGATTTTTAGGAAAGCTGTCTAGTCAAGCTGCTGCAGGAGGTACCGATCGGAAGTACGCCGCAGGCACGCAAAACACAAGCGACGCCAATGTAACAATATATGGATTTGCGCAGTGCATTCCGTATTTGTCTGCGCAAGACTGCACTAAGTGCTTGAACTCAACTCTAAGAGGGATCAGAGGATGTTGTTTGGGGATGATTGGTGGAAGAGTTTTTAATCCCAGCTGTTACTTAAGGTATGAAACTGAAGCGTTTTTAGTCACTGCAGCTGAGGCACCTGCACCTTCGACATCACTAGCAATACCCACTTCTCCTCCTACACTGCCAGGAAAGAAGAAGAGTAATGCATCTCGAAGAAGAGTCATCATCACTGTGACAATTGTCGTTCCTCTGGTGGTACTGATTGTATCCATATGGATTTATGTTAGATTCATTAGGAAGACGAAAGAAAAATGTGAAGATGAAATGAGCACAGAAGCCTTGCAATTTGAATTTGACTCCATCAAAGTTGCTACAAATAACTTTTCGGAAGCAAATACACTCGGGCGAGGCGGATTTGGTTCTGTTTACAAGGGTAAGCTTTGGAACGAAGAGGAGATAGCAGTGAAAAGGCTTTCTAGAGATTCTGCACAAGGAGACATAGAATTCAAAAACGAGGTGATCCTTGTGGCCAAGCTTCAACACCGGAACTTGGTTAGGCTCCTTGGTTACTGTCTGGAGAAAAATGAAAGACTTCTTGTCTATGAGTTTGTCCCAAACGCAAGTCTTGATCATTTCATATTTGATCCAGTCAAGCGTGCAGATTTGGATTGGGAAACTCGTTGCAAAATCATAGTAGGCATTGGACGAGGGCTTCTTTACCTTCATGAAGATTCACGTCTTAGAATTATCCATCGTGATCTCAAAGCAAGTAACATTTTATTAGACGCAGAAATGAACCCCAAAATTGCAGATTTTGGCATGGCAAGACTGTTTAATATCGATCAAACACAAGCTGAAACCAGTCGAATTGTGGGAACCTACGGATACATGGCACCGGAGTATGTTATGCGTGGACACTTTTCTGTGAAGTCTGATGTCTATAGCTTTGGTGTACTGGTCTTGGAGATAGTAAGCGGTCAGAAAAACACTTCCTTTCATCATGATGGAAACTTGGAGGATCTTCTAGGCTATGCATGGAATAGTTGGAAGGAAGGGACATCTTCAAACTTGATAGATCCCACGTTGAGAGCTGGTTTAAGGCCGGAAATAATGAGATGCATTCACATCGGTCTGTTGTGTGTGCAACAAAGTATAGCTGATAGGCCAACTATGGCTGCAGTTATTCAAATGCTTACCAGCACCTCTGTTGATTTACCAGTACCCTCACAACCAGCATTTTTTATGTACAATCACGGGACGGGATCCTCATCCGACATGTCGATGGGATGTGATAGTAACTCAGGATTTACAGGGTCTAGTCAATCCCAAGGCAACTCTGTCCAAATACCTATACATGAGGATTCAACTACTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

669

Amino Acids

73.22

Weight (kDa)

6.05

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	34 - 129	3.3e-23	Salt stress response/antifungal
Stress-antifung	PF01657	153 - 245	3.3e-12	Salt stress response/antifungal
Pkinase	PF00069	339 - 501	4.4e-32	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	342 - 495	6.1e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	775
Acc16I	TGCGCA	2 cut(s)	600, 624
Acc36I	ACCTGC	1 cut(s)	775
Acc65I	GGTACC	1 cut(s)	530
AccB1I	GGYRCC	4 cut(s)	402, 530, 763, 1522
AccB7I	CCANNNNNTGG	1 cut(s)	354
AciI	CCGC	5 cut(s)	123, 285, 549, 1041, 1605
AclWI	GGATC	7 cut(s)	671, 1144, 1268, 1656, 1700, 1887, 1900
AcoI	YGGCCR	1 cut(s)	1158
AcsI	RAATTY	2 cut(s)	980, 1133
AcuI	CTGAAG	1 cut(s)	756
AcyI	GRCGYC	1 cut(s)	573
AdeI	CACNNNGTG	1 cut(s)	639
AfaI	GTAC	7 cut(s)	359, 532, 545, 888, 1584, 1851, 1877
AfeI	AGCGCT	1 cut(s)	133
AfiI	CCNNNNNNNGG	5 cut(s)	219, 354, 398, 399, 1180
AflII	CTTAAG	1 cut(s)	721
AflIII	ACRYGT	2 cut(s)	207, 1905
AhdI	GACNNNNNGTC	1 cut(s)	1226
AjiI	CACGTC	1 cut(s)	1367
AjnI	CCWGG	1 cut(s)	814
Alw21I	GWGCWC	1 cut(s)	962
Alw26I	GTCTC	2 cut(s)	318, 1119
AlwI	GGATC	7 cut(s)	671, 1144, 1268, 1656, 1700, 1887, 1900
Ama87I	CYCGRG	1 cut(s)	1031
Aor51HI	AGCGCT	1 cut(s)	133
AoxI	GGCC	4 cut(s)	345, 1158, 1730, 1793
ApeKI	GCWGC	7 cut(s)	62, 125, 282, 518, 521, 755, 1805
ApoI	RAATTY	2 cut(s)	980, 1133
Asp700I	GAANNNNTTC	1 cut(s)	1221
Asp718I	GGTACC	1 cut(s)	530
AspLEI	GCGC	3 cut(s)	134, 601, 625
AsuHPI	GGTGA	1 cut(s)	1159
AsuNHI	GCTAGC	1 cut(s)	128
AvaI	CYCGRG	1 cut(s)	1031
BaeGI	GKGCMC	2 cut(s)	405, 440
BalI	TGGCCA	1 cut(s)	1160
BamHI	GGATCC	1 cut(s)	1892
BanI	GGYRCC	4 cut(s)	402, 530, 763, 1522
BanII	GRGCYC	1 cut(s)	255
BbsI	GAAGAC	1 cut(s)	935
Bbv12I	GWGCWC	1 cut(s)	962
BbvCI	CCTCAGC	1 cut(s)	759
BbvI	GCAGC	7 cut(s)	74, 112, 269, 505, 508, 767, 1792
BccI	CCATC	4 cut(s)	998, 1389, 1628, 1906
BcgI	CGANNNNNNTGC	4 cut(s)	277, 311, 1738, 1772
BciT130I	CCWGG	1 cut(s)	816
BciVI	GTATCC	2 cut(s)	907, 1508
BclI	TGATCA	1 cut(s)	1258
BcoDI	GTCTC	2 cut(s)	318, 1119
BfaI	CTAG	6 cut(s)	129, 510, 785, 1107, 1655, 1947
BfmI	CTRYAG	5 cut(s)	256, 522, 753, 1570, 1806
BfoI	RGCGCY	1 cut(s)	135
BfrI	CTTAAG	1 cut(s)	721
BfuAI	ACCTGC	1 cut(s)	775
BfuI	GTATCC	2 cut(s)	907, 1508
BisI	GCNGC	9 cut(s)	63, 126, 283, 286, 519, 522, 549, 756, 1806
BlsI	GCNGC	9 cut(s)	64, 127, 284, 287, 520, 523, 550, 757, 1807
Bme1390I	CCNGG	1 cut(s)	816
BmeRI	GACNNNNNGTC	1 cut(s)	1226
BmeT110I	CYCGRG	1 cut(s)	1031
BmgBI	CACGTC	1 cut(s)	1367
BmiI	GGNNCC	8 cut(s)	196, 404, 532, 765, 1190, 1507, 1524, 1894
BmrFI	CCNGG	1 cut(s)	816
BmrI	ACTGGG	1 cut(s)	257
BmsI	GCATC	3 cut(s)	303, 845, 1736
BmtI	GCTAGC	1 cut(s)	132
BmuI	ACTGGG	1 cut(s)	257
BoxI	GACNNNNGTC	1 cut(s)	869
BpiI	GAAGAC	1 cut(s)	935
BpmI	CTGGAG	1 cut(s)	1226
Bpu10I	CCTNAGC	1 cut(s)	759
BpuEI	CTTGAG	1 cut(s)	302
Bsa29I	ATCGAT	1 cut(s)	1470
BsaBI	GATNNNNATC	1 cut(s)	1897
BsaHI	GRCGYC	1 cut(s)	573
BsaJI	CCNNGG	2 cut(s)	1192, 1957
BsaWI	WCCGGW	3 cut(s)	215, 1173, 1525
BsaXI	ACNNNNNCTCC	4 cut(s)	197, 227, 787, 817
Bsc4I	CCNNNNNNNGG	5 cut(s)	219, 354, 398, 399, 1180
Bse118I	RCCGGY	1 cut(s)	278
Bse1I	ACTGG	6 cut(s)	54, 252, 1277, 1491, 1590, 1847
Bse8I	GATNNNNATC	1 cut(s)	1897
BseBI	CCWGG	1 cut(s)	816
BseCI	ATCGAT	1 cut(s)	1470
BseDI	CCNNGG	2 cut(s)	1192, 1957
BseGI	GGATG	5 cut(s)	472, 677, 690, 1898, 1922
BseJI	GATNNNNATC	1 cut(s)	1897
BseLI	CCNNNNNNNGG	5 cut(s)	219, 354, 398, 399, 1180
BseMII	CTCAG	2 cut(s)	750, 1944
BseNI	ACTGG	6 cut(s)	54, 252, 1277, 1491, 1590, 1847
BseRI	GAGGAG	3 cut(s)	276, 792, 1097
BseSI	GKGCMC	2 cut(s)	405, 440
BseXI	GCAGC	7 cut(s)	74, 112, 269, 505, 508, 767, 1792
BseYI	CCCAGC	1 cut(s)	710
BsgI	GTGCAG	4 cut(s)	616, 753, 1101, 1308
Bsh1285I	CGRYCG	1 cut(s)	538
BshFI	GGCC	4 cut(s)	347, 1160, 1732, 1795
BshNI	GGYRCC	4 cut(s)	402, 530, 763, 1522
BshVI	ATCGAT	1 cut(s)	1470
BsiEI	CGRYCG	1 cut(s)	538
BsiHKAI	GWGCWC	1 cut(s)	962
BsiHKCI	CYCGRG	1 cut(s)	1031
BsiSI	CCGG	7 cut(s)	180, 198, 216, 279, 1174, 1526, 1733
BslFI	GGGAC	3 cut(s)	1226, 1699, 1900
BslI	CCNNNNNNNGG	5 cut(s)	219, 354, 398, 399, 1180
BsmAI	GTCTC	2 cut(s)	318, 1119
BsmFI	GGGAC	3 cut(s)	1226, 1699, 1900
BsmI	GAATGC	2 cut(s)	606, 1749
BsnI	GGCC	4 cut(s)	347, 1160, 1732, 1795
BsoBI	CYCGRG	1 cut(s)	1031
Bsp1286I	GDGCHC	4 cut(s)	255, 405, 440, 962
Bsp1407I	TGTACA	1 cut(s)	1875
BspACI	CCGC	5 cut(s)	123, 285, 549, 1041, 1605
BspANI	GGCC	4 cut(s)	347, 1160, 1732, 1795
BspCNI	CTCAG	2 cut(s)	751, 1943
BspDI	ATCGAT	1 cut(s)	1470
BspHI	TCATGA	2 cut(s)	1354, 1630
BspLI	GGNNCC	8 cut(s)	196, 404, 532, 765, 1190, 1507, 1524, 1894
BspMAI	CTGCAG	3 cut(s)	526, 757, 1810
BspMI	ACCTGC	1 cut(s)	775
BspOI	GCTAGC	1 cut(s)	132
BspPI	GGATC	7 cut(s)	671, 1144, 1268, 1656, 1700, 1887, 1900
BspQI	GCTCTTC	1 cut(s)	162
BspT107I	GGYRCC	4 cut(s)	402, 530, 763, 1522
BspTI	CTTAAG	1 cut(s)	721
BsrFI	RCCGGY	1 cut(s)	278
BsrGI	TGTACA	1 cut(s)	1875
BsrI	ACTGG	6 cut(s)	54, 252, 1277, 1491, 1590, 1847
BssAI	RCCGGY	1 cut(s)	278
BssECI	CCNNGG	2 cut(s)	1192, 1957
BssNI	GRCGYC	1 cut(s)	573
BssT1I	CCWWGG	2 cut(s)	1192, 1957
Bst2UI	CCWGG	1 cut(s)	816
Bst4CI	ACNGT	4 cut(s)	312, 862, 1202, 1461
Bst6I	CTCTTC	5 cut(s)	162, 691, 821, 841, 1074
BstACI	GRCGYC	1 cut(s)	573
BstAFI	CTTAAG	1 cut(s)	721
BstAPI	GCANNNNNTGC	1 cut(s)	639
BstAUI	TGTACA	1 cut(s)	1875
BstC8I	GCNNGC	7 cut(s)	60, 130, 280, 371, 553, 557, 1287
BstDEI	CTNAG	6 cut(s)	636, 656, 759, 1370, 1930, 2004
BstF5I	GGATG	5 cut(s)	472, 677, 690, 1898, 1922
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	3 cut(s)	134, 601, 625
BstMAI	GTCTC	2 cut(s)	318, 1119
BstMCI	CGRYCG	1 cut(s)	538
BstMWI	GCNNNNNNNGC	7 cut(s)	131, 140, 291, 375, 435, 639, 761
BstNI	CCWGG	1 cut(s)	816
BstNSI	RCATGY	4 cut(s)	211, 373, 433, 1909
BstPAI	GACNNNNGTC	1 cut(s)	869
BstSCI	CCNGG	1 cut(s)	814
BstSFI	CTRYAG	5 cut(s)	256, 522, 753, 1570, 1806
BstSLI	GKGCMC	2 cut(s)	405, 440
BstV1I	GCAGC	7 cut(s)	74, 112, 269, 505, 508, 767, 1792
BstV2I	GAAGAC	1 cut(s)	935
BstX2I	RGATCY	3 cut(s)	1648, 1705, 1892
BstYI	RGATCY	3 cut(s)	1648, 1705, 1892
Bsu15I	ATCGAT	1 cut(s)	1470
BsuI	GTATCC	2 cut(s)	907, 1508
BsuRI	GGCC	4 cut(s)	347, 1160, 1732, 1795
BsuTUI	ATCGAT	1 cut(s)	1470
BtrI	CACGTC	1 cut(s)	1367
BtsCI	GGATG	5 cut(s)	472, 677, 690, 1898, 1922
BtsI	GCAGTG	4 cut(s)	608, 750, 809, 1098
BtsIMutI	CAGTG	6 cut(s)	245, 608, 750, 809, 858, 1098
BveI	ACCTGC	1 cut(s)	775
Cac8I	GCNNGC	7 cut(s)	60, 130, 280, 371, 553, 557, 1287
CciI	TCATGA	2 cut(s)	1354, 1630
CfoI	GCGC	3 cut(s)	134, 601, 625
Cfr10I	RCCGGY	1 cut(s)	278
ClaI	ATCGAT	1 cut(s)	1470
CseI	GACGC	3 cut(s)	161, 581, 1424
Csp6I	GTAC	7 cut(s)	358, 531, 544, 887, 1583, 1850, 1876
CviQI	GTAC	7 cut(s)	358, 531, 544, 887, 1583, 1850, 1876
DdeI	CTNAG	6 cut(s)	636, 656, 759, 1370, 1930, 2004
DraIII	CACNNNGTG	1 cut(s)	639
DriI	GACNNNNNGTC	1 cut(s)	1226
EaeI	YGGCCR	1 cut(s)	1158
Eam1104I	CTCTTC	5 cut(s)	162, 691, 821, 841, 1074
Eam1105I	GACNNNNNGTC	1 cut(s)	1226
EarI	CTCTTC	5 cut(s)	162, 691, 821, 841, 1074
EciI	GGCGGA	1 cut(s)	1056
Eco130I	CCWWGG	2 cut(s)	1192, 1957
Eco24I	GRGCYC	1 cut(s)	255
Eco47III	AGCGCT	1 cut(s)	133
Eco57I	CTGAAG	1 cut(s)	756
Eco88I	CYCGRG	1 cut(s)	1031
EcoRI	GAATTC	1 cut(s)	1133
EcoRII	CCWGG	1 cut(s)	814
EcoT14I	CCWWGG	2 cut(s)	1192, 1957
EcoT22I	ATGCAT	3 cut(s)	838, 1666, 1751
EcoT38I	GRGCYC	1 cut(s)	255
ErhI	CCWWGG	2 cut(s)	1192, 1957
FaqI	GGGAC	3 cut(s)	1226, 1699, 1900
FauNDI	CATATG	1 cut(s)	902
FbaI	TGATCA	1 cut(s)	1258
Fnu4HI	GCNGC	9 cut(s)	63, 126, 283, 286, 519, 522, 549, 756, 1806
FokI	GGATG	5 cut(s)	479, 684, 697, 1885, 1929
FriOI	GRGCYC	1 cut(s)	255
Fsp4HI	GCNGC	9 cut(s)	63, 126, 283, 286, 519, 522, 549, 756, 1806
FspBI	CTAG	6 cut(s)	129, 510, 785, 1107, 1655, 1947
FspI	TGCGCA	2 cut(s)	600, 624
GlaI	GCGC	3 cut(s)	133, 600, 624
GluI	GCNGC	9 cut(s)	63, 126, 283, 286, 519, 522, 549, 756, 1806
GsaI	CCCAGC	1 cut(s)	714
GsuI	CTGGAG	1 cut(s)	1226
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	4 cut(s)	347, 1160, 1732, 1795
HapII	CCGG	7 cut(s)	180, 198, 216, 279, 1174, 1526, 1733
HgaI	GACGC	3 cut(s)	161, 581, 1424
HhaI	GCGC	3 cut(s)	134, 601, 625
Hin1I	GRCGYC	1 cut(s)	573
Hin6I	GCGC	3 cut(s)	132, 599, 623
HinP1I	GCGC	3 cut(s)	132, 599, 623
HindIII	AAGCTT	4 cut(s)	19, 482, 1067, 1163
HinfI	GANTC	6 cut(s)	849, 918, 986, 1112, 1361, 1991
HpaII	CCGG	7 cut(s)	180, 198, 216, 279, 1174, 1526, 1733
HphI	GGTGA	1 cut(s)	1159
Hpy166II	GTNNAC	3 cut(s)	1057, 1544, 1583
Hpy188I	TCNGA	8 cut(s)	232, 339, 540, 668, 1018, 1564, 1611, 1903
Hpy188III	TCNNGA	9 cut(s)	319, 840, 1107, 1205, 1256, 1355, 1385, 1631, 1932
Hpy8I	GTNNAC	3 cut(s)	1057, 1544, 1583
Hpy99I	CGWCG	2 cut(s)	155, 575
HpyAV	CCTTC	6 cut(s)	106, 334, 783, 1361, 1672, 1676
HpyCH4III	ACNGT	4 cut(s)	312, 862, 1202, 1461
HpyCH4IV	ACGT	3 cut(s)	105, 1366, 1712
HpyF10VI	GCNNNNNNNGC	7 cut(s)	131, 140, 291, 375, 435, 639, 761
HpyF3I	CTNAG	6 cut(s)	636, 656, 759, 1370, 1930, 2004
HpySE526I	ACGT	3 cut(s)	105, 1366, 1712
Hsp92I	GRCGYC	1 cut(s)	573
HspAI	GCGC	3 cut(s)	132, 599, 623
KpnI	GGTACC	1 cut(s)	534
KroI	GCCGGC	1 cut(s)	278
KroNI	GCCGGC	1 cut(s)	280
Ksp22I	TGATCA	1 cut(s)	1258
LguI	GCTCTTC	1 cut(s)	162
LmnI	GCTCC	2 cut(s)	200, 1194
Lsp1109I	GCAGC	7 cut(s)	74, 112, 269, 505, 508, 767, 1792
LweI	GCATC	3 cut(s)	303, 845, 1736
MaeI	CTAG	6 cut(s)	129, 510, 785, 1107, 1655, 1947
MaeII	ACGT	3 cut(s)	105, 1366, 1712
MfeI	CAATTG	4 cut(s)	289, 364, 459, 867
MflI	RGATCY	3 cut(s)	1648, 1705, 1892
MhlI	GDGCHC	4 cut(s)	255, 405, 440, 962
MlsI	TGGCCA	1 cut(s)	1160
MluNI	TGGCCA	1 cut(s)	1160
MlyI	GAGTC	2 cut(s)	858, 980
MmeI	TCCRAC	3 cut(s)	255, 1655, 1926
Mox20I	TGGCCA	1 cut(s)	1160
Mph1103I	ATGCAT	3 cut(s)	838, 1666, 1751
MroNI	GCCGGC	1 cut(s)	278
MroXI	GAANNNNTTC	1 cut(s)	1221
MscI	TGGCCA	1 cut(s)	1160
MseI	TTAA	4 cut(s)	705, 722, 1464, 1727
MslI	CAYNNNNRTG	3 cut(s)	860, 1632, 1910
Msp20I	TGGCCA	1 cut(s)	1160
MspA1I	CMGCKG	3 cut(s)	125, 714, 758
MspCI	CTTAAG	1 cut(s)	721
MspI	CCGG	7 cut(s)	180, 198, 216, 279, 1174, 1526, 1733
MspR9I	CCNGG	1 cut(s)	816
MunI	CAATTG	4 cut(s)	289, 364, 459, 867
Mva1269I	GAATGC	2 cut(s)	606, 1749
MvaI	CCWGG	1 cut(s)	816
MwoI	GCNNNNNNNGC	7 cut(s)	131, 140, 291, 375, 435, 639, 761
NaeI	GCCGGC	1 cut(s)	280
NdeI	CATATG	1 cut(s)	902
NgoMIV	GCCGGC	1 cut(s)	278
NheI	GCTAGC	1 cut(s)	128
NlaIV	GGNNCC	8 cut(s)	196, 404, 532, 765, 1190, 1507, 1524, 1894
NmuCI	GTSAC	3 cut(s)	106, 748, 862
NsbI	TGCGCA	2 cut(s)	600, 624
NsiI	ATGCAT	3 cut(s)	838, 1666, 1751
NspI	RCATGY	4 cut(s)	211, 373, 433, 1909
PaeI	GCATGC	1 cut(s)	373
PagI	TCATGA	2 cut(s)	1354, 1630
PaqCI	CACCTGC	1 cut(s)	775
PciI	ACATGT	2 cut(s)	207, 1905
PciSI	GCTCTTC	1 cut(s)	162
PctI	GAATGC	2 cut(s)	606, 1749
PdiI	GCCGGC	1 cut(s)	280
PdmI	GAANNNNTTC	1 cut(s)	1221
PfeI	GAWTC	4 cut(s)	918, 1112, 1361, 1991
PflMI	CCANNNNNTGG	1 cut(s)	354
PkrI	GCNGC	9 cut(s)	64, 127, 284, 287, 520, 523, 550, 757, 1807
Ple19I	CGATCG	1 cut(s)	538
PleI	GAGTC	2 cut(s)	857, 980
PpsI	GAGTC	2 cut(s)	857, 980
PscI	ACATGT	2 cut(s)	207, 1905
PshAI	GACNNNNGTC	1 cut(s)	869
Psp6I	CCWGG	1 cut(s)	814
PspFI	CCCAGC	1 cut(s)	710
PspGI	CCWGG	1 cut(s)	814
PspN4I	GGNNCC	8 cut(s)	196, 404, 532, 765, 1190, 1507, 1524, 1894
PstI	CTGCAG	3 cut(s)	526, 757, 1810
PsuI	RGATCY	3 cut(s)	1648, 1705, 1892
PvuI	CGATCG	1 cut(s)	538
PvuII	CAGCTG	2 cut(s)	714, 758
RsaI	GTAC	7 cut(s)	359, 532, 545, 888, 1584, 1851, 1877
RsaNI	GTAC	7 cut(s)	358, 531, 544, 887, 1583, 1850, 1876
RseI	CAYNNNNRTG	3 cut(s)	860, 1632, 1910
SapI	GCTCTTC	1 cut(s)	162
SaqAI	TTAA	4 cut(s)	705, 722, 1464, 1727
SatI	GCNGC	9 cut(s)	63, 126, 283, 286, 519, 522, 549, 756, 1806
SchI	GAGTC	2 cut(s)	858, 980
ScrFI	CCNGG	1 cut(s)	816
SduI	GDGCHC	4 cut(s)	255, 405, 440, 962
SfaNI	GCATC	3 cut(s)	303, 845, 1736
SfcI	CTRYAG	5 cut(s)	256, 522, 753, 1570, 1806
SmiMI	CAYNNNNRTG	3 cut(s)	860, 1632, 1910
SmlI	CTYRAG	2 cut(s)	317, 721
SmoI	CTYRAG	2 cut(s)	317, 721
SphI	GCATGC	1 cut(s)	373
SsiI	CCGC	5 cut(s)	123, 285, 549, 1041, 1605
SspMI	CTAG	6 cut(s)	129, 510, 785, 1107, 1655, 1947
StyD4I	CCNGG	1 cut(s)	814
StyI	CCWWGG	2 cut(s)	1192, 1957
TaaI	ACNGT	4 cut(s)	312, 862, 1202, 1461
TaiI	ACGT	3 cut(s)	108, 1369, 1715
TaqI	TCGA	6 cut(s)	150, 776, 841, 1470, 1495, 1910
TaqII	GACCGA	1 cut(s)	1748
TatI	WGTACW	2 cut(s)	1582, 1875
TauI	GCSGC	2 cut(s)	288, 551
TfiI	GAWTC	4 cut(s)	918, 1112, 1361, 1991
Tru1I	TTAA	4 cut(s)	705, 722, 1464, 1727
Tru9I	TTAA	4 cut(s)	705, 722, 1464, 1727
TscAI	CASTG	6 cut(s)	252, 608, 757, 816, 865, 1098
TseFI	GTSAC	3 cut(s)	106, 748, 862
TseI	GCWGC	7 cut(s)	62, 125, 282, 518, 521, 755, 1805
Tsp45I	GTSAC	3 cut(s)	106, 748, 862
TspGWI	ACGGA	2 cut(s)	600, 1527
TspRI	CASTG	6 cut(s)	252, 608, 757, 816, 865, 1098
Van91I	CCANNNNNTGG	1 cut(s)	354
Vha464I	CTTAAG	1 cut(s)	721
XapI	RAATTY	2 cut(s)	980, 1133
XbaI	TCTAGA	1 cut(s)	1106
XceI	RCATGY	4 cut(s)	211, 373, 433, 1909
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1498
XmnI	GAANNNNTTC	1 cut(s)	1221
XspI	CTAG	6 cut(s)	129, 510, 785, 1107, 1655, 1947
Zsp2I	ATGCAT	3 cut(s)	838, 1666, 1751

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.