Rmu_sc0003286.1_g000013

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003286.1
Physical Location & Seq
Forward (+)
58953 .. 60647
1695 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003286.1_g000013.1.cds

Sequence Viewer

Length: 777 bp
atgcttcttggaggcatatgcattttcttaagagtcaagaagccaagggtaaaacttgacgacccaaccaatcatgaacatttggattgggaaacacgttacaagatcatagaaggaattgttcgtggtcttctttacctccatgaagattctcgacttcgagttattcaccgtgatgtcaaagccagcaacattttgttggatgaagatatgaatcctaaaattgcagattttggtatggcaaggttgtttgtgatggatcaaactgaagcagatacaaaaaccattgttgggacctatggatacatggcacctgaatatgcaagtcatgggcgcttttctgtcaagtcagatgtctttagttttggtgtgttagttcttgaaataattactggcaagaagagccgaaatggtgaaaatgaagacgacctattaagctacgcctggagaaattggagggatgatacaactctaaatatcatagatcccatgttaacaacaggctcaagatctgaaataatcagatgcatccagattggtttactatgtgtccaagaaaatttgaatgacagaccaaccatgagttcagttgtttccatgcttaatagtcattctctcaaaatctcgataccttcacggcctccatattattggccttataacactgagtcagtgacatcagggtcgggattcagacttactgagacatctgataaatcccaaagctctgtgtcaagaggtatgatttcagatattactgaactacatccacgctag

Protein Analysis

258

Amino Acids

29.36

Weight (kDa)

6.18

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 660
AasI GACNNNNNNGTC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 310
AclWI GGATC 2 cut(s) 267, 479
AcsI RAATTY 1 cut(s) 559
AcuI CTGAAG 1 cut(s) 288
AfiI CCNNNNNNNGG 1 cut(s) 291
AflII CTTAAG 1 cut(s) 28
AflIII ACRYGT 1 cut(s) 95
AgsI TTSAA 2 cut(s) 383, 565
AjnI CCWGG 1 cut(s) 443
AjuI GAANNNNNNNTTGG 2 cut(s) 568, 600
AluBI AGCT 2 cut(s) 438, 726
AluI AGCT 2 cut(s) 438, 726
Alw26I GTCTC 1 cut(s) 698
AlwI GGATC 2 cut(s) 267, 479
AoxI GGCC 2 cut(s) 638, 653
ApoI RAATTY 1 cut(s) 559
AspLEI GCGC 1 cut(s) 336
AspS9I GGNCC 1 cut(s) 294
AsuHPI GGTGA 2 cut(s) 161, 425
AvaII GGWCC 1 cut(s) 294
BanI GGYRCC 1 cut(s) 310
BbsI GAAGAC 2 cut(s) 122, 429
BccI CCATC 1 cut(s) 250
BceAI ACGGC 1 cut(s) 653
BciT130I CCWGG 1 cut(s) 445
BciVI GTATCC 1 cut(s) 296
BcoDI GTCTC 1 cut(s) 698
BfaI CTAG 1 cut(s) 775
BfoI RGCGCY 1 cut(s) 337
BfrI CTTAAG 1 cut(s) 28
BfuI GTATCC 1 cut(s) 296
BglII AGATCT 1 cut(s) 509
Bme1390I CCNGG 1 cut(s) 445
Bme18I GGWCC 1 cut(s) 294
BmgT120I GGNCC 1 cut(s) 294
BmiI GGNNCC 2 cut(s) 295, 312
BmrFI CCNGG 1 cut(s) 445
BmsI GCATC 2 cut(s) 515, 537
BpiI GAAGAC 2 cut(s) 122, 429
BpmI CTGGAG 1 cut(s) 466
BpuEI CTTGAG 1 cut(s) 490
BsaBI GATNNNNATC 1 cut(s) 213
BsaJI CCNNGG 1 cut(s) 44
Bsc4I CCNNNNNNNGG 1 cut(s) 291
Bse1I ACTGG 1 cut(s) 397
Bse8I GATNNNNATC 1 cut(s) 213
BseBI CCWGG 1 cut(s) 445
BseDI CCNNGG 1 cut(s) 44
BseGI GGATG 4 cut(s) 208, 466, 528, 766
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 1 cut(s) 291
BseMII CTCAG 2 cut(s) 657, 693
BseNI ACTGG 1 cut(s) 397
BshFI GGCC 2 cut(s) 640, 655
BshNI GGYRCC 1 cut(s) 310
BslFI GGGAC 1 cut(s) 307
BslI CCNNNNNNNGG 1 cut(s) 291
BsmAI GTCTC 1 cut(s) 698
BsmFI GGGAC 1 cut(s) 307
BsnI GGCC 2 cut(s) 640, 655
Bsp143I GATC 4 cut(s) 105, 259, 484, 509
BspANI GGCC 2 cut(s) 640, 655
BspCNI CTCAG 2 cut(s) 658, 694
BspHI TCATGA 1 cut(s) 73
BspLI GGNNCC 2 cut(s) 295, 312
BspPI GGATC 2 cut(s) 267, 479
BspQI GCTCTTC 1 cut(s) 395
BspT107I GGYRCC 1 cut(s) 310
BspTI CTTAAG 1 cut(s) 28
BsrI ACTGG 1 cut(s) 397
BssECI CCNNGG 1 cut(s) 44
BssMI GATC 4 cut(s) 105, 259, 484, 509
BssT1I CCWWGG 1 cut(s) 44
Bst2UI CCWGG 1 cut(s) 445
Bst4CI ACNGT 1 cut(s) 173
Bst6I CTCTTC 1 cut(s) 395
BstAFI CTTAAG 1 cut(s) 28
BstC8I GCNNGC 1 cut(s) 187
BstDEI CTNAG 2 cut(s) 666, 702
BstF5I GGATG 4 cut(s) 208, 466, 528, 766
BstH2I RGCGCY 1 cut(s) 337
BstHHI GCGC 1 cut(s) 336
BstKTI GATC 4 cut(s) 108, 262, 487, 512
BstMAI GTCTC 1 cut(s) 698
BstMBI GATC 4 cut(s) 105, 259, 484, 509
BstMWI GCNNNNNNNGC 1 cut(s) 402
BstNI CCWGG 1 cut(s) 445
BstSCI CCNGG 1 cut(s) 443
BstV2I GAAGAC 2 cut(s) 122, 429
BstX2I RGATCY 2 cut(s) 484, 509
BstXI CCANNNNNNTGG 1 cut(s) 651
BstYI RGATCY 2 cut(s) 484, 509
BsuI GTATCC 1 cut(s) 296
BsuRI GGCC 2 cut(s) 640, 655
BtsCI GGATG 4 cut(s) 208, 466, 528, 766
BtsIMutI CAGTG 2 cut(s) 663, 678
Cac8I GCNNGC 1 cut(s) 187
CciI TCATGA 1 cut(s) 73
CfoI GCGC 1 cut(s) 336
Cfr13I GGNCC 1 cut(s) 294
CviAII CATG 7 cut(s) 74, 143, 307, 329, 490, 580, 598
CviJI RGCY 8 cut(s) 43, 185, 405, 438, 504, 640, 655, 726
CviKI_1 RGCY 8 cut(s) 43, 185, 405, 438, 504, 640, 655, 726
DdeI CTNAG 2 cut(s) 666, 702
DpnI GATC 4 cut(s) 107, 261, 486, 511
DpnII GATC 4 cut(s) 105, 259, 484, 509
DrdI GACNNNNNNGTC 1 cut(s) 682
DseDI GACNNNNNNGTC 1 cut(s) 682
Eam1104I CTCTTC 1 cut(s) 395
EarI CTCTTC 1 cut(s) 395
Eco130I CCWWGG 1 cut(s) 44
Eco47I GGWCC 1 cut(s) 294
Eco57I CTGAAG 1 cut(s) 288
EcoO109I RGGNCCY 1 cut(s) 294
EcoRII CCWGG 1 cut(s) 443
EcoT14I CCWWGG 1 cut(s) 44
EcoT22I ATGCAT 2 cut(s) 23, 530
ErhI CCWWGG 1 cut(s) 44
FaeI CATG 7 cut(s) 77, 146, 310, 332, 493, 583, 601
FaqI GGGAC 1 cut(s) 307
FatI CATG 7 cut(s) 73, 142, 306, 328, 489, 579, 597
FauNDI CATATG 1 cut(s) 17
FokI GGATG 4 cut(s) 215, 473, 515, 753
FspBI CTAG 1 cut(s) 775
GlaI GCGC 1 cut(s) 335
GsuI CTGGAG 1 cut(s) 466
HaeII RGCGCY 1 cut(s) 337
HaeIII GGCC 2 cut(s) 640, 655
HhaI GCGC 1 cut(s) 336
Hin1II CATG 7 cut(s) 77, 146, 310, 332, 493, 583, 601
Hin6I GCGC 1 cut(s) 334
HinP1I GCGC 1 cut(s) 334
HincII GTYRAC 1 cut(s) 495
HindII GTYRAC 1 cut(s) 495
HinfI GANTC 5 cut(s) 33, 149, 214, 668, 690
HpaI GTTAAC 1 cut(s) 495
HphI GGTGA 2 cut(s) 161, 425
Hpy166II GTNNAC 2 cut(s) 495, 542
Hpy188I TCNGA 6 cut(s) 352, 514, 524, 695, 712, 751
Hpy188III TCNNGA 9 cut(s) 37, 74, 153, 380, 507, 532, 625, 687, 735
Hpy8I GTNNAC 2 cut(s) 495, 542
HpyAV CCTTC 2 cut(s) 107, 642
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 4 cut(s) 21, 227, 323, 528
HpyF10VI GCNNNNNNNGC 1 cut(s) 402
HpyF3I CTNAG 2 cut(s) 666, 702
HpySE526I ACGT 1 cut(s) 97
Hsp92II CATG 7 cut(s) 77, 146, 310, 332, 493, 583, 601
HspAI GCGC 1 cut(s) 334
KspAI GTTAAC 1 cut(s) 495
Kzo9I GATC 4 cut(s) 105, 259, 484, 509
LguI GCTCTTC 1 cut(s) 395
LpnPI CCDG 8 cut(s) 199, 327, 378, 430, 457, 486, 545, 666
LweI GCATC 2 cut(s) 515, 537
MaeI CTAG 1 cut(s) 775
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 2 cut(s) 98, 673
MalI GATC 4 cut(s) 107, 261, 486, 511
MboI GATC 4 cut(s) 105, 259, 484, 509
MboII GAAGA 5 cut(s) 122, 158, 218, 412, 434
MflI RGATCY 2 cut(s) 484, 509
MluCI AATT 5 cut(s) 117, 222, 387, 451, 559
MlyI GAGTC 2 cut(s) 42, 677
MmeI TCCRAC 1 cut(s) 180
MnlI CCTC 5 cut(s) 5, 149, 450, 651, 731
Mph1103I ATGCAT 2 cut(s) 23, 530
MseI TTAA 4 cut(s) 29, 434, 494, 603
MslI CAYNNNNRTG 1 cut(s) 174
MspCI CTTAAG 1 cut(s) 28
MspR9I CCNGG 1 cut(s) 445
MvaI CCWGG 1 cut(s) 445
MwoI GCNNNNNNNGC 1 cut(s) 402
NdeI CATATG 1 cut(s) 17
NdeII GATC 4 cut(s) 105, 259, 484, 509
NlaIII CATG 7 cut(s) 77, 146, 310, 332, 493, 583, 601
NlaIV GGNNCC 2 cut(s) 295, 312
NmuCI GTSAC 1 cut(s) 673
NsiI ATGCAT 2 cut(s) 23, 530
PagI TCATGA 1 cut(s) 73
PciSI GCTCTTC 1 cut(s) 395
PfeI GAWTC 3 cut(s) 149, 214, 690
PleI GAGTC 2 cut(s) 41, 676
PpsI GAGTC 2 cut(s) 41, 676
PpuMI RGGWCCY 1 cut(s) 294
PsiI TTATAA 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 294
Psp6I CCWGG 1 cut(s) 443
PspGI CCWGG 1 cut(s) 443
PspN4I GGNNCC 2 cut(s) 295, 312
PspPI GGNCC 1 cut(s) 294
PspPPI RGGWCCY 1 cut(s) 294
PsuI RGATCY 2 cut(s) 484, 509
RseI CAYNNNNRTG 1 cut(s) 174
SapI GCTCTTC 1 cut(s) 395
SaqAI TTAA 4 cut(s) 29, 434, 494, 603
Sau3AI GATC 4 cut(s) 105, 259, 484, 509
Sau96I GGNCC 1 cut(s) 294
SchI GAGTC 2 cut(s) 42, 677
ScrFI CCNGG 1 cut(s) 445
SfaNI GCATC 2 cut(s) 515, 537
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 1 cut(s) 174
SmlI CTYRAG 2 cut(s) 28, 505
SmoI CTYRAG 2 cut(s) 28, 505
Sse9I AATT 5 cut(s) 117, 222, 387, 451, 559
SspMI CTAG 1 cut(s) 775
StyD4I CCNGG 1 cut(s) 443
StyI CCWWGG 1 cut(s) 44
TaaI ACNGT 1 cut(s) 173
TaiI ACGT 1 cut(s) 100
TaqI TCGA 3 cut(s) 154, 160, 626
TasI AATT 5 cut(s) 117, 222, 387, 451, 559
TfiI GAWTC 3 cut(s) 149, 214, 690
Tru1I TTAA 4 cut(s) 29, 434, 494, 603
Tru9I TTAA 4 cut(s) 29, 434, 494, 603
TscAI CASTG 2 cut(s) 670, 678
TseFI GTSAC 1 cut(s) 673
Tsp45I GTSAC 1 cut(s) 673
TspDTI ATGAA 5 cut(s) 90, 159, 219, 227, 435
TspRI CASTG 2 cut(s) 670, 678
Vha464I CTTAAG 1 cut(s) 28
VpaK11BI GGWCC 1 cut(s) 294
XapI RAATTY 1 cut(s) 559
XspI CTAG 1 cut(s) 775
Zsp2I ATGCAT 2 cut(s) 23, 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.