Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

88041 .. 90966

Gene Structure 2926 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54383

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGTTTCCACTAGTTTTGTATCACTCCTTTCTATACAGGCACTTCATGTGTTACTGATCATCATCATGATCACTGCCCAAGCACTTGATCTGCCTCCCAATGGTAAGAGCAACTTCTGTTACAACGACAGAGGCAACTACACTACCAATGGTAGTGTCTACCAGACAAACCTCAACAGCATGCTCAACTACCTCATCTCCAACAGAAACGGCACCGGGTTTTACAGTTCCTCCAGACTCTCAGGCCCAAACCCCGAAGATGAAGAAGTTTACGCCACCGGAGTTTGTAGAGGAGACGCTAAGGTGGATGCTTGCGGCAAATGCCTTAGCGACTCTACATATCAACTCACCAAGTCTTGCCCTAACCAGAAGGAGGCACTTGGATGCTTCGACAACTGCACTTTACGCTACTCGAATCGCTCCTTGTACGGCGTCATGGAATCCAAGCCTGCTTTGATCTCCTATAACCTACAAAACGTGTCATCGTCGTTAGATGCAGTTGAGGACTTCAATCAACGGTTCACTACGCTGTTGGACGGTTTGACGACTGAAGCCGCGGCTCGGGGTGATGAGCTCAAGTTTGCATTTGGAAATGTAAATGCTTCAAAGATTAATAAAACGATATATGCAATGGCGCAGTGCACACCGGATTTGACGGAGAAAGACTGCAAGAGTTGCTTGGATGATGCTGTTGGACAACTGAAAATATTTTATGGGAGTATTGGAGGGAGAGTTTGTACACCCAGTTGTAACTTTAGGTTCGAGGTTTACCCTTTCCTAGAACCGCAGGAAGCCCAGGCGGTCGCGGTTCCTTTACCTCCTTTACCATCCTCCAATACCACAGTTTCATTGGGATTAGGTTCCTCAGATGAAATTGGAAGTGCAGAAGCCTTGCAATTCGACTTTGGCTCCATTAAGGTTGCCACAAATAACTTCTCAGAAGAAAATAAACTTGGACGAGGTGGATTTGGTGTTGTCTACAAGGGTAGACTTTTCAGTAAAGAAGATATAGCAGTGAAAAGACTTTCTAGTGATTCTAAACAAGGAGATGAAGAATTCAAGAATGAGGTATTGTTAGTGGCTAGGCTTCAGCATCGCAATTTGGTTAAGCTCCTAGGTTTCAGTCTGGAAGGAAATGAAAGGCTTCTTGTCTATGAGTTTCTCCCTAACGCAAGCCTCGATCAATTTATATTTGATCCAACCAAGCGCTCACATTTTGATTGGGATAGTCGGTACAGAATCATAGTAGGAATTGCCAGAGGACTCCTTTACCTCCACGAAGATTCTCGTCTTAGGATTATTCATCGTGATCTCAAAGCTAGCAACATTTTGCTAGATGCAGAAATGAACCCGAAGATTGCTGATTTTGGCATGGCAAAGTTGTTTAAGCTTGATCAAAGACAAGGCGAAACCCATCGAATCGTAGGAACATACGGATATATGGCTCCAGAGTATGCAATGCGAGGGAAATTTTCTGTTAAATCTGATGTCTATAGCTTTGGAGTGTTACTTTTGGAGATAATAAGTGGACAGAAGATCAATTCTTCCCATCATGATGATAAGAATGACGAGGATCTTGTAAGCTTTGCGTGGAGAAATTGGAGGGAAGGCACAGCTTCAAATTTAATAGATTCTACCTTGATGCCTGCAGTTTCAAACACTGACATAATGAGATGCATCCACATTGGATTGCTATGTTTGCAAGAAAGTATGGCTGATAGGCCAACCGTGACTTCAGTTATTCAAATGCTTACATGCGAGTCTCCTGGTCTCCCAAAACCATCACAACCAACCCTTTTTGTGATTAATGGATCTGATATGGCAGGGCTCATGGGATCAAATGATTCCAAGAGATTCCTATCATCAGAAATCAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

626

Amino Acids

69.25

Weight (kDa)

5.74

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	40 - 140	2.2e-18	Salt stress response/antifungal
Stress-antifung	PF01657	166 - 256	1.5e-11	Salt stress response/antifungal
Pkinase	PF00069	313 - 582	2.8e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	315 - 583	1.8e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	212
AccI	GTMKAC	3 cut(s)	159, 978, 988
AccII	CGCG	2 cut(s)	557, 806
AciI	CCGC	6 cut(s)	315, 555, 557, 785, 800, 806
AclWI	GGATC	4 cut(s)	1190, 1581, 1819, 1843
AcsI	RAATTY	3 cut(s)	1055, 1469, 1621
AcuI	CTGAAG	3 cut(s)	570, 1073, 1719
AcyI	GRCGYC	1 cut(s)	432
AfaI	GTAC	3 cut(s)	428, 739, 1235
AfeI	AGCGCT	1 cut(s)	1208
AfiI	CCNNNNNNNGG	3 cut(s)	101, 373, 561
AflIII	ACRYGT	1 cut(s)	477
AgsI	TTSAA	6 cut(s)	511, 606, 1060, 1620, 1656, 1745
AhlI	ACTAGT	1 cut(s)	11
AjnI	CCWGG	2 cut(s)	795, 1765
AjuI	GAANNNNNNNTTGG	4 cut(s)	936, 968, 1717, 1749
AluBI	AGCT	7 cut(s)	574, 1111, 1319, 1390, 1497, 1584, 1616
AluI	AGCT	7 cut(s)	574, 1111, 1319, 1390, 1497, 1584, 1616
Alw21I	GWGCWC	2 cut(s)	576, 644
Alw26I	GTCTC	3 cut(s)	288, 1767, 1775
Alw44I	GTGCAC	1 cut(s)	640
AlwI	GGATC	4 cut(s)	1190, 1581, 1819, 1843
Ama87I	CYCGRG	1 cut(s)	561
Aor51HI	AGCGCT	1 cut(s)	1208
AoxI	GGCC	2 cut(s)	244, 1721
ApaLI	GTGCAC	1 cut(s)	640
ApoI	RAATTY	3 cut(s)	1055, 1469, 1621
AseI	ATTAAT	2 cut(s)	612, 1806
Asp700I	GAANNNNTTC	1 cut(s)	1143
AspA2I	CCTAGG	1 cut(s)	1114
AspLEI	GCGC	2 cut(s)	637, 1209
AspS9I	GGNCC	1 cut(s)	245
AsuC2I	CCSGG	1 cut(s)	217
AsuHPI	GGTGA	2 cut(s)	340, 578
AsuNHI	GCTAGC	1 cut(s)	1319
AvaI	CYCGRG	1 cut(s)	561
AvrII	CCTAGG	1 cut(s)	1114
BaeGI	GKGCMC	1 cut(s)	644
BanI	GGYRCC	1 cut(s)	212
BanII	GRGCYC	2 cut(s)	576, 1830
Bbv12I	GWGCWC	2 cut(s)	576, 644
BccI	CCATC	4 cut(s)	835, 1422, 1557, 1789
BceAI	ACGGC	2 cut(s)	226, 445
BciT130I	CCWGG	2 cut(s)	797, 1767
BclI	TGATCA	3 cut(s)	57, 69, 1393
BcnI	CCSGG	1 cut(s)	217
BcoDI	GTCTC	3 cut(s)	288, 1767, 1775
BcuI	ACTAGT	1 cut(s)	11
BfaI	CTAG	7 cut(s)	12, 779, 1029, 1083, 1115, 1320, 1334
BfmI	CTRYAG	2 cut(s)	1492, 1647
BfoI	RGCGCY	1 cut(s)	1210
BisI	GCNGC	3 cut(s)	316, 555, 558
BlnI	CCTAGG	1 cut(s)	1114
BlsI	GCNGC	3 cut(s)	317, 556, 559
Bme1390I	CCNGG	3 cut(s)	217, 797, 1767
BmeT110I	CYCGRG	1 cut(s)	561
BmgT120I	GGNCC	1 cut(s)	245
BmiI	GGNNCC	5 cut(s)	214, 810, 862, 910, 1446
BmrFI	CCNGG	3 cut(s)	217, 797, 1767
BmrI	ACTGGG	1 cut(s)	738
BmsI	GCATC	9 cut(s)	298, 374, 484, 676, 1102, 1327, 1632, 1664, 1686
BmtI	GCTAGC	1 cut(s)	1323
BmuI	ACTGGG	1 cut(s)	738
BpmI	CTGGAG	2 cut(s)	217, 1431
Bpu10I	CCTNAGC	2 cut(s)	300, 326
BpuEI	CTTGAG	1 cut(s)	560
BpuMI	CCSGG	1 cut(s)	217
BsaBI	GATNNNNATC	2 cut(s)	62, 1858
BsaHI	GRCGYC	1 cut(s)	432
BsaI	GGTCTC	1 cut(s)	1775
BsaJI	CCNNGG	3 cut(s)	555, 795, 1114
BsaWI	WCCGGW	2 cut(s)	278, 646
Bsc4I	CCNNNNNNNGG	3 cut(s)	101, 373, 561
Bse1I	ACTGG	1 cut(s)	744
Bse3DI	GCAATG	2 cut(s)	636, 1464
Bse8I	GATNNNNATC	2 cut(s)	62, 1858
BseBI	CCWGG	2 cut(s)	797, 1767
BseDI	CCNNGG	3 cut(s)	555, 795, 1114
BseGI	GGATG	5 cut(s)	313, 389, 688, 827, 1677
BseJI	GATNNNNATC	2 cut(s)	62, 1858
BseLI	CCNNNNNNNGG	3 cut(s)	101, 373, 561
BseMI	GCAATG	2 cut(s)	636, 1464
BseMII	CTCAG	3 cut(s)	255, 879, 951
BseNI	ACTGG	1 cut(s)	744
BseRI	GAGGAG	1 cut(s)	306
BseSI	GKGCMC	1 cut(s)	644
BsgI	GTGCAG	2 cut(s)	382, 903
Bsh1236I	CGCG	2 cut(s)	557, 806
Bsh1285I	CGRYCG	1 cut(s)	804
BshFI	GGCC	2 cut(s)	246, 1723
BshNI	GGYRCC	1 cut(s)	212
BsiEI	CGRYCG	1 cut(s)	804
BsiHKAI	GWGCWC	2 cut(s)	576, 644
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	3 cut(s)	216, 279, 647
BslI	CCNNNNNNNGG	3 cut(s)	101, 373, 561
BsmAI	GTCTC	3 cut(s)	288, 1767, 1775
BsmBI	CGTCTC	1 cut(s)	288
BsnI	GGCC	2 cut(s)	246, 1723
Bso31I	GGTCTC	1 cut(s)	1775
BsoBI	CYCGRG	1 cut(s)	561
Bsp1286I	GDGCHC	3 cut(s)	576, 644, 1830
Bsp1407I	TGTACA	1 cut(s)	737
BspACI	CCGC	6 cut(s)	315, 555, 557, 785, 800, 806
BspANI	GGCC	2 cut(s)	246, 1723
BspCNI	CTCAG	3 cut(s)	254, 878, 950
BspFNI	CGCG	2 cut(s)	557, 806
BspHI	TCATGA	2 cut(s)	66, 1552
BspLI	GGNNCC	5 cut(s)	214, 810, 862, 910, 1446
BspMAI	CTGCAG	1 cut(s)	1651
BspOI	GCTAGC	1 cut(s)	1323
BspPI	GGATC	4 cut(s)	1190, 1581, 1819, 1843
BspT107I	GGYRCC	1 cut(s)	212
BspTNI	GGTCTC	1 cut(s)	1775
BsrDI	GCAATG	2 cut(s)	636, 1464
BsrGI	TGTACA	1 cut(s)	737
BsrI	ACTGG	1 cut(s)	744
BssECI	CCNNGG	3 cut(s)	555, 795, 1114
BssNI	GRCGYC	1 cut(s)	432
BssT1I	CCWWGG	1 cut(s)	1114
Bst2UI	CCWGG	2 cut(s)	797, 1767
Bst4CI	ACNGT	5 cut(s)	227, 519, 539, 844, 1729
BstACI	GRCGYC	1 cut(s)	432
BstAPI	GCANNNNNTGC	1 cut(s)	675
BstAUI	TGTACA	1 cut(s)	737
BstC8I	GCNNGC	6 cut(s)	182, 313, 450, 1174, 1321, 1647
BstDEI	CTNAG	6 cut(s)	241, 300, 326, 865, 937, 1292
BstDSI	CCRYGG	1 cut(s)	555
BstF5I	GGATG	5 cut(s)	313, 389, 688, 827, 1677
BstFNI	CGCG	2 cut(s)	557, 806
BstH2I	RGCGCY	1 cut(s)	1210
BstHHI	GCGC	2 cut(s)	637, 1209
BstMAI	GTCTC	3 cut(s)	288, 1767, 1775
BstMCI	CGRYCG	1 cut(s)	804
BstMWI	GCNNNNNNNGC	4 cut(s)	321, 405, 675, 1699
BstNI	CCWGG	2 cut(s)	797, 1767
BstNSI	RCATGY	2 cut(s)	184, 1758
BstSCI	CCNGG	3 cut(s)	215, 795, 1765
BstSFI	CTRYAG	2 cut(s)	1492, 1647
BstSLI	GKGCMC	1 cut(s)	644
BstUI	CGCG	2 cut(s)	557, 806
BstX2I	RGATCY	2 cut(s)	1573, 1811
BstYI	RGATCY	2 cut(s)	1573, 1811
BsuRI	GGCC	2 cut(s)	246, 1723
BtgI	CCRYGG	1 cut(s)	555
BtgZI	GCGATG	1 cut(s)	1079
BtsCI	GGATG	5 cut(s)	313, 389, 688, 827, 1677
BtsI	GCAGTG	3 cut(s)	72, 644, 1020
BtsIMutI	CAGTG	4 cut(s)	72, 644, 1020, 1659
Cac8I	GCNNGC	6 cut(s)	182, 313, 450, 1174, 1321, 1647
CciI	TCATGA	2 cut(s)	66, 1552
CfoI	GCGC	2 cut(s)	637, 1209
Cfr13I	GGNCC	1 cut(s)	245
Cfr42I	CCGCGG	1 cut(s)	558
CseI	GACGC	2 cut(s)	305, 421
Csp6I	GTAC	3 cut(s)	427, 738, 1234
CspCI	CAANNNNNGTGG	1 cut(s)	33
CviAII	CATG	8 cut(s)	47, 67, 181, 436, 1372, 1553, 1755, 1831
CviQI	GTAC	3 cut(s)	427, 738, 1234
DdeI	CTNAG	6 cut(s)	241, 300, 326, 865, 937, 1292
Ecl136II	GAGCTC	1 cut(s)	574
Eco130I	CCWWGG	1 cut(s)	1114
Eco24I	GRGCYC	2 cut(s)	576, 1830
Eco31I	GGTCTC	1 cut(s)	1775
Eco47III	AGCGCT	1 cut(s)	1208
Eco53kI	GAGCTC	1 cut(s)	574
Eco57I	CTGAAG	3 cut(s)	570, 1073, 1719
Eco88I	CYCGRG	1 cut(s)	561
EcoICRI	GAGCTC	1 cut(s)	574
EcoRI	GAATTC	1 cut(s)	1055
EcoRII	CCWGG	2 cut(s)	795, 1765
EcoT14I	CCWWGG	1 cut(s)	1114
EcoT22I	ATGCAT	1 cut(s)	1679
EcoT38I	GRGCYC	2 cut(s)	576, 1830
ErhI	CCWWGG	1 cut(s)	1114
Esp3I	CGTCTC	1 cut(s)	288
FaeI	CATG	8 cut(s)	50, 70, 184, 439, 1375, 1556, 1758, 1834
FalI	AAGNNNNNCTT	4 cut(s)	98, 130, 662, 694
FatI	CATG	8 cut(s)	46, 66, 180, 435, 1371, 1552, 1754, 1830
FbaI	TGATCA	3 cut(s)	57, 69, 1393
FblI	GTMKAC	3 cut(s)	159, 978, 988
Fnu4HI	GCNGC	3 cut(s)	316, 555, 558
FokI	GGATG	5 cut(s)	320, 396, 695, 814, 1664
FriOI	GRGCYC	2 cut(s)	576, 1830
Fsp4HI	GCNGC	3 cut(s)	316, 555, 558
FspBI	CTAG	7 cut(s)	12, 779, 1029, 1083, 1115, 1320, 1334
GlaI	GCGC	2 cut(s)	636, 1208
GluI	GCNGC	3 cut(s)	316, 555, 558
GsuI	CTGGAG	2 cut(s)	217, 1431
HaeII	RGCGCY	1 cut(s)	1210
HaeIII	GGCC	2 cut(s)	246, 1723
HapII	CCGG	3 cut(s)	216, 279, 647
HgaI	GACGC	2 cut(s)	305, 421
HhaI	GCGC	2 cut(s)	637, 1209
Hin1I	GRCGYC	1 cut(s)	432
Hin1II	CATG	8 cut(s)	50, 70, 184, 439, 1375, 1556, 1758, 1834
Hin6I	GCGC	2 cut(s)	635, 1207
HinP1I	GCGC	2 cut(s)	635, 1207
HindIII	AAGCTT	2 cut(s)	1388, 1582
HpaII	CCGG	3 cut(s)	216, 279, 647
HphI	GGTGA	2 cut(s)	340, 578
Hpy166II	GTNNAC	9 cut(s)	160, 271, 522, 642, 740, 769, 979, 989, 1529
Hpy188I	TCNGA	5 cut(s)	868, 940, 1486, 1816, 1867
Hpy188III	TCNNGA	8 cut(s)	67, 234, 1060, 1127, 1307, 1448, 1553, 1873
Hpy8I	GTNNAC	9 cut(s)	160, 271, 522, 642, 740, 769, 979, 989, 1529
Hpy99I	CGWCG	1 cut(s)	490
HpyAV	CCTTC	3 cut(s)	364, 1124, 1601
HpyCH4III	ACNGT	5 cut(s)	227, 519, 539, 844, 1729
HpyCH4IV	ACGT	1 cut(s)	477
HpyF10VI	GCNNNNNNNGC	4 cut(s)	321, 405, 675, 1699
HpyF3I	CTNAG	6 cut(s)	241, 300, 326, 865, 937, 1292
HpySE526I	ACGT	1 cut(s)	477
Hsp92I	GRCGYC	1 cut(s)	432
Hsp92II	CATG	8 cut(s)	50, 70, 184, 439, 1375, 1556, 1758, 1834
HspAI	GCGC	2 cut(s)	635, 1207
Ksp22I	TGATCA	3 cut(s)	57, 69, 1393
KspI	CCGCGG	1 cut(s)	558
LmnI	GCTCC	4 cut(s)	425, 914, 1116, 1450
LweI	GCATC	9 cut(s)	298, 374, 484, 676, 1102, 1327, 1632, 1664, 1686
MaeI	CTAG	7 cut(s)	12, 779, 1029, 1083, 1115, 1320, 1334
MaeII	ACGT	1 cut(s)	477
MaeIII	GTNAC	5 cut(s)	51, 119, 749, 1506, 1729
MboII	GAAGA	9 cut(s)	269, 275, 953, 1016, 1064, 1292, 1366, 1536, 1546
MflI	RGATCY	2 cut(s)	1573, 1811
MhlI	GDGCHC	3 cut(s)	576, 644, 1830
MlyI	GAGTC	4 cut(s)	231, 326, 1257, 1769
MmeI	TCCRAC	4 cut(s)	225, 513, 673, 1223
Mph1103I	ATGCAT	1 cut(s)	1679
MroXI	GAANNNNTTC	1 cut(s)	1143
MseI	TTAA	7 cut(s)	612, 915, 1107, 1386, 1479, 1625, 1806
MslI	CAYNNNNRTG	3 cut(s)	65, 382, 1554
MspA1I	CMGCKG	1 cut(s)	557
MspI	CCGG	3 cut(s)	216, 279, 647
MspR9I	CCNGG	3 cut(s)	217, 797, 1767
MvaI	CCWGG	2 cut(s)	797, 1767
MvnI	CGCG	2 cut(s)	557, 806
MwoI	GCNNNNNNNGC	4 cut(s)	321, 405, 675, 1699
NciI	CCSGG	1 cut(s)	217
NheI	GCTAGC	1 cut(s)	1319
NlaIII	CATG	8 cut(s)	50, 70, 184, 439, 1375, 1556, 1758, 1834
NlaIV	GGNNCC	5 cut(s)	214, 810, 862, 910, 1446
NmuCI	GTSAC	1 cut(s)	1729
NsiI	ATGCAT	1 cut(s)	1679
NspI	RCATGY	2 cut(s)	184, 1758
PaeI	GCATGC	1 cut(s)	184
PagI	TCATGA	2 cut(s)	66, 1552
PcsI	WCGNNNNNNNCGW	1 cut(s)	1176
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	9 cut(s)	415, 440, 1034, 1239, 1283, 1419, 1631, 1844, 1854
PkrI	GCNGC	3 cut(s)	317, 556, 559
PleI	GAGTC	4 cut(s)	231, 326, 1257, 1768
PpsI	GAGTC	4 cut(s)	231, 326, 1257, 1768
PshBI	ATTAAT	2 cut(s)	612, 1806
Psp124BI	GAGCTC	1 cut(s)	576
Psp6I	CCWGG	2 cut(s)	795, 1765
PspGI	CCWGG	2 cut(s)	795, 1765
PspN4I	GGNNCC	5 cut(s)	214, 810, 862, 910, 1446
PspPI	GGNCC	1 cut(s)	245
PstI	CTGCAG	1 cut(s)	1651
PsuI	RGATCY	2 cut(s)	1573, 1811
RsaI	GTAC	3 cut(s)	428, 739, 1235
RsaNI	GTAC	3 cut(s)	427, 738, 1234
RseI	CAYNNNNRTG	3 cut(s)	65, 382, 1554
SacI	GAGCTC	1 cut(s)	576
SacII	CCGCGG	1 cut(s)	558
SaqAI	TTAA	7 cut(s)	612, 915, 1107, 1386, 1479, 1625, 1806
SatI	GCNGC	3 cut(s)	316, 555, 558
Sau96I	GGNCC	1 cut(s)	245
SchI	GAGTC	4 cut(s)	231, 326, 1257, 1769
ScrFI	CCNGG	3 cut(s)	217, 797, 1767
SduI	GDGCHC	3 cut(s)	576, 644, 1830
SfaNI	GCATC	9 cut(s)	298, 374, 484, 676, 1102, 1327, 1632, 1664, 1686
SfcI	CTRYAG	2 cut(s)	1492, 1647
Sfr303I	CCGCGG	1 cut(s)	558
SgrBI	CCGCGG	1 cut(s)	558
SmiMI	CAYNNNNRTG	3 cut(s)	65, 382, 1554
SmlI	CTYRAG	1 cut(s)	575
SmoI	CTYRAG	1 cut(s)	575
SpeI	ACTAGT	1 cut(s)	11
SphI	GCATGC	1 cut(s)	184
SsiI	CCGC	6 cut(s)	315, 555, 557, 785, 800, 806
SspI	AATATT	1 cut(s)	708
SspMI	CTAG	7 cut(s)	12, 779, 1029, 1083, 1115, 1320, 1334
SstI	GAGCTC	1 cut(s)	576
StyD4I	CCNGG	3 cut(s)	215, 795, 1765
StyI	CCWWGG	1 cut(s)	1114
TaaI	ACNGT	5 cut(s)	227, 519, 539, 844, 1729
TaiI	ACGT	1 cut(s)	480
TaqI	TCGA	6 cut(s)	390, 413, 762, 900, 1179, 1417
TatI	WGTACW	1 cut(s)	737
TauI	GCSGC	3 cut(s)	318, 557, 560
TfiI	GAWTC	9 cut(s)	415, 440, 1034, 1239, 1283, 1419, 1631, 1844, 1854
Tru1I	TTAA	7 cut(s)	612, 915, 1107, 1386, 1479, 1625, 1806
Tru9I	TTAA	7 cut(s)	612, 915, 1107, 1386, 1479, 1625, 1806
TscAI	CASTG	4 cut(s)	79, 644, 1020, 1666
TseFI	GTSAC	1 cut(s)	1729
Tsp45I	GTSAC	1 cut(s)	1729
TspDTI	ATGAA	8 cut(s)	35, 276, 837, 885, 1065, 1152, 1292, 1361
TspGWI	ACGGA	2 cut(s)	671, 1449
TspRI	CASTG	4 cut(s)	79, 644, 1020, 1666
VneI	GTGCAC	1 cut(s)	640
VspI	ATTAAT	2 cut(s)	612, 1806
XapI	RAATTY	3 cut(s)	1055, 1469, 1621
XceI	RCATGY	2 cut(s)	184, 1758
XcmI	CCANNNNNNNNNTGG	1 cut(s)	847
XmaJI	CCTAGG	1 cut(s)	1114
XmiI	GTMKAC	3 cut(s)	159, 978, 988
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	7 cut(s)	12, 779, 1029, 1083, 1115, 1320, 1334
Zsp2I	ATGCAT	1 cut(s)	1679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.