Rroxscaffold_1G00046680

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
66036683 .. 66039557
2875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00046680.1

Sequence Viewer

Length: 1680 bp
ATGGGATCCTCAATGTGGCTGCTTCTGTTCTTCTTCGTTCCCGCAACCTTACACCACCTTGTTGCTCAAACCATAATAAAAGGCGACGTCTCATGCACTTCGAGTGCTGAATTGTGCTGGAGTTGTGCTGGTTCCGGCAATTACACTAATGGCAGCATCTACCAACAAAACCTCATCAGCCTCCTTTCCTCCTTTTCCAACAATTCCCAAAACCAAGCCAACTATGGCTTTCACAACTCTTCTCTCGGACATGGCTCCAACAAAGTGAATGCCATTGCCTTGTGCAGAGGAGATCTAGCACTCCGAGAATGTAGTAGCTGTCTCAGCGACTCCACTCAGATTCTCCTGCGAAATTGTTCATATAAAACGGAAGCAATCTTATGGGCAGAGCCTTGCATGGTACGGTGGTCTCAAGACTCAATATTTGGTATTGTGGAAGAGGACCCTTTTATATATCTGCCCAGCCCGCACAACGCGTTAAACGCTCAAGCGTTCCGGCAGGTGCTCAACCCCTTGTTGGAAATTTTAAGAGACAGAGCTACTTCAGGTGATTCTCGAAAAAAATATGCAACAGGACATGCAATTGTTCCGGGATACGAAACGATATATGCACATGCGCAGTGCACTCCGGACATAGACAAAGTCAATTGCAGTAATTGCCTAAACAGTTGCATCTCTGCTATTCCACTATGTTGCAGTGGAAAGTCAGGAACAAGAGTTCTTAAACCAAGTTGTAATATAAGGTTTGAGTACGGTCTTTTCTATAAGTCTACAGCCGATTCAGAAGTAAATATTTCAGCTCCAGCTCCAGTTACTCCAACAACTCCAGTACTTCCACCTAAGCAAGGAAAGAAGAGTAACACAAAAAGAACTATCATCATCATCACTGAGGTTGTGATTGCTTTTGTCACTACGCTTCTCGGTGGCATATGCATTTTCTTAAGAGTCAAGCAGCTAAGGGTAAAACGTGACTATGATATTTCTGAAGAAATTAGCCTCGTGGAATCGTTACAATATGACTTTGAAGCTATAAGATCGGCAACGGATGACTTTTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAGACTACATAACGGACGATATATAGCTGTGAAAAGACTCTCTAAGAGTTCTGAACAGGGTGATCGTGAATTTAAAAATGAAGTCACTGGATACATGGCACCTGAATATGCAAGTCATGGACGCTTTTCTATCAAGTCAGACGTCTTCAGTTTTGGTGTGTTAGTTCTTGAAATAATTACTGGCAAGAAGAGTGGTAGTTTTCAGAATGGTGAAAATGAAGACGATTTGTTAAGCTATGTCTGGAGAAATTGGAGGGATGATAGAATTTCAAATATCATAGATCCCCTGTTAACAACAAGCTCAAGATATGACATAATCAGATGCATCCACATTGGTTTATTATGTGTCCAAGAAAATGTGAATGACAGACCAACCATGACTTCAGTTGTTTCCATGCTTAACAGTCATTCTCTCATACTCTCAACACCTTCACGAACTCCATATTATTGGCATTATAACACTGATTCAGAAACATCAGGGTCGGGATTTAGACTTACAGAGACATCTTATAAATCCGGAAGCTCTGTGCCAAGAAGTGTGGTTTCAGATAATATTACTGAAGTATATCCACGCTAG

Protein Analysis

559

Amino Acids

61.99

Weight (kDa)

7.13

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 42 - 138 1.2e-20 Salt stress response/antifungal
Stress-antifung PF01657 161 - 250 1.1e-09 Salt stress response/antifungal
PK_Tyr_Ser-Thr PF07714 398 - 501 4.9e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1560, 1614
AarI CACCTGC 1 cut(s) 490
AatII GACGTC 2 cut(s) 90, 1248
Acc16I TGCGCA 1 cut(s) 618
Acc36I ACCTGC 1 cut(s) 490
AccB1I GGYRCC 1 cut(s) 1201
AccI GTMKAC 2 cut(s) 770, 1105
AccII CGCG 1 cut(s) 476
AccIII TCCGGA 2 cut(s) 628, 1619
AciI CCGC 2 cut(s) 42, 467
AclWI GGATC 2 cut(s) 13, 1379
AcsI RAATTY 3 cut(s) 522, 1172, 1368
AcuI CTGAAG 4 cut(s) 528, 1005, 1234, 1470
AcyI GRCGYC 2 cut(s) 87, 1245
AfaI GTAC 3 cut(s) 402, 752, 831
AfiI CCNNNNNNNGG 3 cut(s) 15, 517, 845
AflII CTTAAG 1 cut(s) 940
AflIII ACRYGT 1 cut(s) 474
AgsI TTSAA 3 cut(s) 1025, 1274, 1374
AjuI GAANNNNNNNTTGG 4 cut(s) 1053, 1085, 1468, 1500
AloI GAACNNNNNNTCC 2 cut(s) 702, 734
Alw21I GWGCWC 2 cut(s) 507, 626
Alw26I GTCTC 5 cut(s) 94, 326, 414, 525, 1598
Alw44I GTGCAC 1 cut(s) 622
AlwI GGATC 2 cut(s) 13, 1379
Aor13HI TCCGGA 2 cut(s) 628, 1619
ApaLI GTGCAC 1 cut(s) 622
ApeKI GCWGC 3 cut(s) 19, 153, 952
ApoI RAATTY 3 cut(s) 522, 1172, 1368
ArsI GACNNNNNNTTYG 2 cut(s) 407, 439
Asp700I GAANNNNTTC 1 cut(s) 355
AspLEI GCGC 1 cut(s) 619
AspS9I GGNCC 1 cut(s) 442
AsuC2I CCSGG 1 cut(s) 591
AsuHPI GGTGA 3 cut(s) 560, 1175, 1325
AvaII GGWCC 1 cut(s) 442
BaeGI GKGCMC 1 cut(s) 626
BaeI ACNNNNGTAYC 2 cut(s) 392, 425
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1201
BauI CACGAG 1 cut(s) 998
BbsI GAAGAC 2 cut(s) 1240, 1329
Bbv12I GWGCWC 2 cut(s) 507, 626
BbvI GCAGC 3 cut(s) 6, 165, 964
BciVI GTATCC 2 cut(s) 587, 1187
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 5 cut(s) 94, 326, 414, 525, 1598
BfaI CTAG 2 cut(s) 296, 1678
BfmI CTRYAG 1 cut(s) 771
BfrI CTTAAG 1 cut(s) 940
BfuAI ACCTGC 1 cut(s) 490
BfuI GTATCC 2 cut(s) 587, 1187
BglII AGATCT 1 cut(s) 292
BisI GCNGC 3 cut(s) 20, 154, 953
BlsI GCNGC 3 cut(s) 21, 155, 954
BmcAI AGTACT 1 cut(s) 831
Bme1390I CCNGG 1 cut(s) 591
Bme18I GGWCC 1 cut(s) 442
BmgT120I GGNCC 1 cut(s) 442
BmiI GGNNCC 5 cut(s) 7, 133, 256, 444, 1203
BmrFI CCNGG 1 cut(s) 591
BmsI GCATC 4 cut(s) 165, 681, 1415, 1437
BpiI GAAGAC 2 cut(s) 1240, 1329
BpmI CTGGAG 5 cut(s) 139, 786, 792, 810, 1366
Bpu10I CCTNAGC 2 cut(s) 840, 956
BpuEI CTTGAG 3 cut(s) 396, 471, 1390
BpuMI CCSGG 1 cut(s) 591
BsaHI GRCGYC 2 cut(s) 87, 1245
BsaI GGTCTC 1 cut(s) 414
BsaWI WCCGGW 2 cut(s) 628, 1619
Bsc4I CCNNNNNNNGG 3 cut(s) 15, 517, 845
Bse1I ACTGG 4 cut(s) 809, 827, 1195, 1288
Bse3DI GCAATG 1 cut(s) 273
BseAI TCCGGA 2 cut(s) 628, 1619
BseGI GGATG 3 cut(s) 1051, 1366, 1428
BseLI CCNNNNNNNGG 3 cut(s) 15, 517, 845
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 3 cut(s) 337, 350, 879
BseNI ACTGG 4 cut(s) 809, 827, 1195, 1288
BseRI GAGGAG 1 cut(s) 303
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 3 cut(s) 6, 165, 964
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 1 cut(s) 476
BshNI GGYRCC 1 cut(s) 1201
BsiHKAI GWGCWC 2 cut(s) 507, 626
BsiSI CCGG 5 cut(s) 135, 496, 590, 629, 1620
BslI CCNNNNNNNGG 3 cut(s) 15, 517, 845
BsmAI GTCTC 5 cut(s) 94, 326, 414, 525, 1598
BsmBI CGTCTC 1 cut(s) 94
BsmI GAATGC 1 cut(s) 274
Bso31I GGTCTC 1 cut(s) 414
Bsp1286I GDGCHC 2 cut(s) 507, 626
Bsp13I TCCGGA 2 cut(s) 628, 1619
Bsp143I GATC 5 cut(s) 5, 292, 1034, 1165, 1384
BspACI CCGC 2 cut(s) 42, 467
BspCNI CTCAG 3 cut(s) 336, 349, 880
BspEI TCCGGA 2 cut(s) 628, 1619
BspFNI CGCG 1 cut(s) 476
BspLI GGNNCC 5 cut(s) 7, 133, 256, 444, 1203
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 2 cut(s) 13, 1379
BspT107I GGYRCC 1 cut(s) 1201
BspTI CTTAAG 1 cut(s) 940
BspTNI GGTCTC 1 cut(s) 414
BsrDI GCAATG 1 cut(s) 273
BsrI ACTGG 4 cut(s) 809, 827, 1195, 1288
BssMI GATC 5 cut(s) 5, 292, 1034, 1165, 1384
BssNI GRCGYC 2 cut(s) 87, 1245
BssSI CACGAG 1 cut(s) 998
Bst2BI CACGAG 1 cut(s) 998
Bst4CI ACNGT 4 cut(s) 405, 668, 755, 1508
Bst6I CTCTTC 4 cut(s) 244, 432, 848, 1286
BstACI GRCGYC 2 cut(s) 87, 1245
BstAFI CTTAAG 1 cut(s) 940
BstAPI GCANNNNNTGC 1 cut(s) 657
BstC8I GCNNGC 1 cut(s) 467
BstDEI CTNAG 6 cut(s) 323, 336, 840, 888, 956, 1146
BstENI CCTNNNNNAGG 1 cut(s) 843
BstF5I GGATG 3 cut(s) 1051, 1366, 1428
BstFNI CGCG 1 cut(s) 476
BstHHI GCGC 1 cut(s) 619
BstKTI GATC 5 cut(s) 8, 295, 1037, 1168, 1387
BstMAI GTCTC 5 cut(s) 94, 326, 414, 525, 1598
BstMBI GATC 5 cut(s) 5, 292, 1034, 1165, 1384
BstMWI GCNNNNNNNGC 4 cut(s) 324, 466, 482, 657
BstNSI RCATGY 2 cut(s) 581, 617
BstSCI CCNGG 1 cut(s) 589
BstSFI CTRYAG 1 cut(s) 771
BstSLI GKGCMC 1 cut(s) 626
BstUI CGCG 1 cut(s) 476
BstV1I GCAGC 3 cut(s) 6, 165, 964
BstV2I GAAGAC 2 cut(s) 1240, 1329
BstX2I RGATCY 3 cut(s) 5, 292, 1384
BstXI CCANNNNNNTGG 1 cut(s) 1551
BstYI RGATCY 3 cut(s) 5, 292, 1384
BsuI GTATCC 2 cut(s) 587, 1187
BtsCI GGATG 3 cut(s) 1051, 1366, 1428
BtsI GCAGTG 2 cut(s) 626, 703
BtsIMutI CAGTG 5 cut(s) 626, 703, 885, 1188, 1563
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 1 cut(s) 467
CfoI GCGC 1 cut(s) 619
Cfr13I GGNCC 1 cut(s) 442
CseI GACGC 1 cut(s) 1233
Csp6I GTAC 3 cut(s) 401, 751, 830
CspCI CAANNNNNGTGG 4 cut(s) 1276, 1311, 1623, 1658
CviAII CATG 9 cut(s) 93, 251, 397, 578, 614, 1198, 1220, 1480, 1498
CviQI GTAC 3 cut(s) 401, 751, 830
DdeI CTNAG 6 cut(s) 323, 336, 840, 888, 956, 1146
DpnI GATC 5 cut(s) 7, 294, 1036, 1167, 1386
DpnII GATC 5 cut(s) 5, 292, 1034, 1165, 1384
DraI TTTAAA 1 cut(s) 1177
Eam1104I CTCTTC 4 cut(s) 244, 432, 848, 1286
EarI CTCTTC 4 cut(s) 244, 432, 848, 1286
Eco31I GGTCTC 1 cut(s) 414
Eco47I GGWCC 1 cut(s) 442
Eco57I CTGAAG 4 cut(s) 528, 1005, 1234, 1470
EcoNI CCTNNNNNAGG 1 cut(s) 843
EcoO109I RGGNCCY 1 cut(s) 442
EcoT22I ATGCAT 2 cut(s) 935, 1430
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 9 cut(s) 96, 254, 400, 581, 617, 1201, 1223, 1483, 1501
FatI CATG 9 cut(s) 92, 250, 396, 577, 613, 1197, 1219, 1479, 1497
FauI CCCGC 2 cut(s) 49, 474
FauNDI CATATG 1 cut(s) 929
FblI GTMKAC 2 cut(s) 770, 1105
Fnu4HI GCNGC 3 cut(s) 20, 154, 953
FokI GGATG 3 cut(s) 1058, 1373, 1415
Fsp4HI GCNGC 3 cut(s) 20, 154, 953
FspBI CTAG 2 cut(s) 296, 1678
FspI TGCGCA 1 cut(s) 618
GlaI GCGC 1 cut(s) 618
GluI GCNGC 3 cut(s) 20, 154, 953
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 5 cut(s) 139, 786, 792, 810, 1366
HapII CCGG 5 cut(s) 135, 496, 590, 629, 1620
HgaI GACGC 1 cut(s) 1233
HhaI GCGC 1 cut(s) 619
Hin1I GRCGYC 2 cut(s) 87, 1245
Hin1II CATG 9 cut(s) 96, 254, 400, 581, 617, 1201, 1223, 1483, 1501
Hin6I GCGC 1 cut(s) 617
HinP1I GCGC 1 cut(s) 617
HincII GTYRAC 1 cut(s) 1395
HindII GTYRAC 1 cut(s) 1395
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 9 cut(s) 329, 340, 416, 551, 779, 945, 1004, 1140, 1568
HpaI GTTAAC 1 cut(s) 1395
HpaII CCGG 5 cut(s) 135, 496, 590, 629, 1620
HphI GGTGA 3 cut(s) 560, 1175, 1325
Hpy166II GTNNAC 5 cut(s) 624, 771, 1096, 1106, 1395
Hpy8I GTNNAC 5 cut(s) 624, 771, 1096, 1106, 1395
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 1 cut(s) 1542
HpyCH4III ACNGT 4 cut(s) 405, 668, 755, 1508
HpyCH4IV ACGT 3 cut(s) 87, 967, 1245
HpyF10VI GCNNNNNNNGC 4 cut(s) 324, 466, 482, 657
HpyF3I CTNAG 6 cut(s) 323, 336, 840, 888, 956, 1146
HpySE526I ACGT 3 cut(s) 87, 967, 1245
Hsp92I GRCGYC 2 cut(s) 87, 1245
Hsp92II CATG 9 cut(s) 96, 254, 400, 581, 617, 1201, 1223, 1483, 1501
HspAI GCGC 1 cut(s) 617
Kpn2I TCCGGA 2 cut(s) 628, 1619
KspAI GTTAAC 1 cut(s) 1395
Kzo9I GATC 5 cut(s) 5, 292, 1034, 1165, 1384
LmnI GCTCC 4 cut(s) 260, 805, 811, 1088
Lsp1109I GCAGC 3 cut(s) 6, 165, 964
LweI GCATC 4 cut(s) 165, 681, 1415, 1437
MaeI CTAG 2 cut(s) 296, 1678
MaeII ACGT 3 cut(s) 87, 967, 1245
MaeIII GTNAC 6 cut(s) 811, 857, 907, 968, 1008, 1186
MalI GATC 5 cut(s) 7, 294, 1036, 1167, 1386
MboI GATC 5 cut(s) 5, 292, 1034, 1165, 1384
MboII GAAGA 9 cut(s) 22, 25, 231, 449, 865, 998, 1240, 1303, 1334
MfeI CAATTG 2 cut(s) 582, 646
MflI RGATCY 3 cut(s) 5, 292, 1384
MhlI GDGCHC 2 cut(s) 507, 626
MluI ACGCGT 1 cut(s) 474
MlyI GAGTC 4 cut(s) 323, 410, 954, 1134
MmeI TCCRAC 4 cut(s) 222, 282, 498, 842
MnlI CCTC 9 cut(s) 19, 182, 191, 199, 281, 433, 883, 1007, 1350
Mph1103I ATGCAT 2 cut(s) 935, 1430
MroI TCCGGA 2 cut(s) 628, 1619
MroXI GAANNNNTTC 1 cut(s) 355
MseI TTAA 8 cut(s) 479, 527, 723, 941, 1176, 1334, 1394, 1503
MspCI CTTAAG 1 cut(s) 940
MspI CCGG 5 cut(s) 135, 496, 590, 629, 1620
MspR9I CCNGG 1 cut(s) 591
MunI CAATTG 2 cut(s) 582, 646
Mva1269I GAATGC 1 cut(s) 274
MvnI CGCG 1 cut(s) 476
MwoI GCNNNNNNNGC 4 cut(s) 324, 466, 482, 657
NciI CCSGG 1 cut(s) 591
NdeI CATATG 1 cut(s) 929
NdeII GATC 5 cut(s) 5, 292, 1034, 1165, 1384
NlaIII CATG 9 cut(s) 96, 254, 400, 581, 617, 1201, 1223, 1483, 1501
NlaIV GGNNCC 5 cut(s) 7, 133, 256, 444, 1203
NmuCI GTSAC 3 cut(s) 907, 968, 1186
NsbI TGCGCA 1 cut(s) 618
NsiI ATGCAT 2 cut(s) 935, 1430
NspI RCATGY 2 cut(s) 581, 617
PaqCI CACCTGC 1 cut(s) 490
PctI GAATGC 1 cut(s) 274
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 5 cut(s) 340, 551, 779, 1004, 1568
PflFI GACNNNGTC 1 cut(s) 641
PfoI TCCNGGA 1 cut(s) 589
PkrI GCNGC 3 cut(s) 21, 155, 954
PleI GAGTC 4 cut(s) 323, 410, 953, 1134
PpsI GAGTC 4 cut(s) 323, 410, 953, 1134
PpuMI RGGWCCY 1 cut(s) 442
PsiI TTATAA 2 cut(s) 1560, 1614
Psp5II RGGWCCY 1 cut(s) 442
PspFI CCCAGC 1 cut(s) 461
PspN4I GGNNCC 5 cut(s) 7, 133, 256, 444, 1203
PspPI GGNCC 1 cut(s) 442
PspPPI RGGWCCY 1 cut(s) 442
PsuI RGATCY 3 cut(s) 5, 292, 1384
PsyI GACNNNGTC 1 cut(s) 641
RsaI GTAC 3 cut(s) 402, 752, 831
RsaNI GTAC 3 cut(s) 401, 751, 830
SaqAI TTAA 8 cut(s) 479, 527, 723, 941, 1176, 1334, 1394, 1503
SatI GCNGC 3 cut(s) 20, 154, 953
Sau3AI GATC 5 cut(s) 5, 292, 1034, 1165, 1384
Sau96I GGNCC 1 cut(s) 442
ScaI AGTACT 1 cut(s) 831
SchI GAGTC 4 cut(s) 323, 410, 954, 1134
ScrFI CCNGG 1 cut(s) 591
SduI GDGCHC 2 cut(s) 507, 626
SfaNI GCATC 4 cut(s) 165, 681, 1415, 1437
SfcI CTRYAG 1 cut(s) 771
SinI GGWCC 1 cut(s) 442
SmlI CTYRAG 4 cut(s) 411, 486, 940, 1405
SmoI CTYRAG 4 cut(s) 411, 486, 940, 1405
SsiI CCGC 2 cut(s) 42, 467
SspI AATATT 3 cut(s) 423, 793, 1657
SspMI CTAG 2 cut(s) 296, 1678
StyD4I CCNGG 1 cut(s) 589
TaaI ACNGT 4 cut(s) 405, 668, 755, 1508
TaiI ACGT 3 cut(s) 90, 970, 1248
TaqI TCGA 2 cut(s) 101, 556
TatI WGTACW 1 cut(s) 829
TfiI GAWTC 5 cut(s) 340, 551, 779, 1004, 1568
Tru1I TTAA 8 cut(s) 479, 527, 723, 941, 1176, 1334, 1394, 1503
Tru9I TTAA 8 cut(s) 479, 527, 723, 941, 1176, 1334, 1394, 1503
TscAI CASTG 5 cut(s) 626, 703, 892, 1195, 1570
TseFI GTSAC 3 cut(s) 907, 968, 1186
TseI GCWGC 3 cut(s) 19, 153, 952
Tsp45I GTSAC 3 cut(s) 907, 968, 1186
TspDTI ATGAA 4 cut(s) 348, 1074, 1197, 1335
TspGWI ACGGA 3 cut(s) 383, 1058, 1131
TspRI CASTG 5 cut(s) 626, 703, 892, 1195, 1570
Tth111I GACNNNGTC 1 cut(s) 641
Vha464I CTTAAG 1 cut(s) 940
VneI GTGCAC 1 cut(s) 622
VpaK11BI GGWCC 1 cut(s) 442
XagI CCTNNNNNAGG 1 cut(s) 843
XapI RAATTY 3 cut(s) 522, 1172, 1368
XceI RCATGY 2 cut(s) 581, 617
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XmiI GTMKAC 2 cut(s) 770, 1105
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 2 cut(s) 296, 1678
ZraI GACGTC 2 cut(s) 88, 1246
ZrmI AGTACT 1 cut(s) 831
Zsp2I ATGCAT 2 cut(s) 935, 1430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.