Rmu_sc0005870.1_g000017

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005870.1
Physical Location & Seq
Forward (+)
85371 .. 86240
870 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005870.1_g000017.1.cds

Sequence Viewer

Length: 870 bp
atggttttctcaagttttggatttggaattttcctttctatacaacttctggtactcgttatcattgaagccgttgatctacacttcgtttgttcaaacaacaggggtagctacacccccggtagtgtttatcagaaaaacctcaacgactttctctcctccctcgtcactaatgagagcagcaatggctatggcctctacaactcctcttttggccaagacgatgatatcaccgacaaagtttatgccatcgggctttgtagaccggatcttataccggatgcttccctcaaatccttcaaagactcggcatacaatctcacaagggcttgtccaaatcagaaggaagcaatcatatggaatgagtattgcatggtacgctactcaaaccgctcctttcattttgagctttctcccagtaacaatcaatcgaccacgagaagcctattgtcgtcggatgtcgatttattcaattctgagctggaggagttaatcggagtactgaaaagtcaagcagctgcaggtggtcttcagaaaaagtttgcaacggaaagtaaaagggttatgtattccaacaatcagtcaatatctggaattgtacagtgcattccggacttggaggaggaggagtgcagtttctgcttggaggagggtttgagacagcttcagaaatgttgttatgggatggattctgcgagatttggtaatccgagctgtaatttgaggtatgatgtttacaccaccgatgatccagctaaatatcatgaaccacgagcactatctcctcctacgccatcagccaatgcaaccaaaaattcagcaggtaagagtgctgctaaagatttgtatgtagtatttactttaatttag

Protein Analysis

289

Amino Acids

32.05

Weight (kDa)

5.0

Isoelectric Point (pI)

43.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 512
Acc36I ACCTGC 2 cut(s) 512, 812
AccBSI CCGCTC 1 cut(s) 393
AccI GTMKAC 1 cut(s) 262
AccIII TCCGGA 1 cut(s) 610
AciI CCGC 1 cut(s) 391
AclWI GGATC 2 cut(s) 276, 743
AcoI YGGCCR 1 cut(s) 214
AcsI RAATTY 2 cut(s) 27, 814
AcuI CTGAAG 2 cut(s) 515, 650
AfaI GTAC 4 cut(s) 54, 378, 501, 600
AgsI TTSAA 4 cut(s) 68, 96, 301, 472
AluBI AGCT 7 cut(s) 111, 409, 481, 518, 664, 714, 755
AluI AGCT 7 cut(s) 111, 409, 481, 518, 664, 714, 755
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 1 cut(s) 652
AlwI GGATC 2 cut(s) 276, 743
AlwNI CAGNNNCTG 1 cut(s) 639
Aor13HI TCCGGA 1 cut(s) 610
AoxI GGCC 2 cut(s) 193, 214
ApeKI GCWGC 4 cut(s) 180, 515, 518, 833
ApoI RAATTY 2 cut(s) 27, 814
AsuC2I CCSGG 1 cut(s) 120
AsuHPI GGTGA 1 cut(s) 223
BalI TGGCCA 1 cut(s) 216
BauI CACGAG 2 cut(s) 436, 771
BbsI GAAGAC 1 cut(s) 521
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 4 cut(s) 192, 505, 527, 820
BccI CCATC 3 cut(s) 257, 679, 802
BceAI ACGGC 1 cut(s) 56
BcnI CCSGG 1 cut(s) 120
BcoDI GTCTC 1 cut(s) 652
BfmI CTRYAG 1 cut(s) 519
BfuAI ACCTGC 2 cut(s) 512, 812
BisI GCNGC 4 cut(s) 181, 516, 519, 834
BlsI GCNGC 4 cut(s) 182, 517, 520, 835
BmcAI AGTACT 1 cut(s) 501
Bme1390I CCNGG 1 cut(s) 120
BmrFI CCNGG 1 cut(s) 120
BmrI ACTGGG 1 cut(s) 411
BmsI GCATC 1 cut(s) 271
BmuI ACTGGG 1 cut(s) 411
BpiI GAAGAC 1 cut(s) 521
BpmI CTGGAG 1 cut(s) 503
BpuMI CCSGG 1 cut(s) 120
BsaJI CCNNGG 1 cut(s) 118
BsaWI WCCGGW 3 cut(s) 265, 277, 610
BsaXI ACNNNNNCTCC 4 cut(s) 140, 170, 614, 644
Bse1I ACTGG 1 cut(s) 417
Bse3DI GCAATG 1 cut(s) 190
BseAI TCCGGA 1 cut(s) 610
BseDI CCNNGG 1 cut(s) 118
BseGI GGATG 3 cut(s) 286, 463, 690
BseMI GCAATG 1 cut(s) 190
BseMII CTCAG 1 cut(s) 468
BseNI ACTGG 1 cut(s) 417
BseRI GAGGAG 8 cut(s) 148, 196, 500, 635, 638, 641, 662, 774
BseXI GCAGC 4 cut(s) 192, 505, 527, 820
BsgI GTGCAG 1 cut(s) 652
BshFI GGCC 2 cut(s) 195, 216
BsiHKAI GWGCWC 1 cut(s) 778
BsiSI CCGG 4 cut(s) 120, 266, 278, 611
BsmAI GTCTC 1 cut(s) 652
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 2 cut(s) 195, 216
Bsp1286I GDGCHC 1 cut(s) 778
Bsp13I TCCGGA 1 cut(s) 610
Bsp1407I TGTACA 1 cut(s) 598
Bsp143I GATC 3 cut(s) 76, 268, 748
BspACI CCGC 1 cut(s) 391
BspANI GGCC 2 cut(s) 195, 216
BspCNI CTCAG 1 cut(s) 469
BspEI TCCGGA 1 cut(s) 610
BspHI TCATGA 1 cut(s) 763
BspMAI CTGCAG 1 cut(s) 523
BspMI ACCTGC 2 cut(s) 512, 812
BspPI GGATC 2 cut(s) 276, 743
BsrBI CCGCTC 1 cut(s) 393
BsrDI GCAATG 1 cut(s) 190
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 1 cut(s) 417
BssECI CCNNGG 1 cut(s) 118
BssMI GATC 3 cut(s) 76, 268, 748
BssSI CACGAG 2 cut(s) 436, 771
Bst2BI CACGAG 2 cut(s) 436, 771
Bst4CI ACNGT 1 cut(s) 603
BstAPI GCANNNNNTGC 1 cut(s) 639
BstAUI TGTACA 1 cut(s) 598
BstDEI CTNAG 1 cut(s) 477
BstF5I GGATG 3 cut(s) 286, 463, 690
BstKTI GATC 3 cut(s) 79, 271, 751
BstMAI GTCTC 1 cut(s) 652
BstMBI GATC 3 cut(s) 76, 268, 748
BstMWI GCNNNNNNNGC 3 cut(s) 186, 378, 639
BstSCI CCNGG 1 cut(s) 118
BstSFI CTRYAG 1 cut(s) 519
BstV1I GCAGC 4 cut(s) 192, 505, 527, 820
BstV2I GAAGAC 1 cut(s) 521
BstX2I RGATCY 1 cut(s) 268
BstYI RGATCY 1 cut(s) 268
BsuRI GGCC 2 cut(s) 195, 216
BtsCI GGATG 3 cut(s) 286, 463, 690
BtsIMutI CAGTG 1 cut(s) 608
BveI ACCTGC 2 cut(s) 512, 812
CaiI CAGNNNCTG 1 cut(s) 639
CciI TCATGA 1 cut(s) 763
Csp6I GTAC 4 cut(s) 53, 377, 500, 599
CviAII CATG 2 cut(s) 373, 764
CviQI GTAC 4 cut(s) 53, 377, 500, 599
DdeI CTNAG 1 cut(s) 477
DpnI GATC 3 cut(s) 78, 270, 750
DpnII GATC 3 cut(s) 76, 268, 748
EaeI YGGCCR 1 cut(s) 214
Eco32I GATATC 1 cut(s) 229
Eco57I CTGAAG 2 cut(s) 515, 650
EcoRV GATATC 1 cut(s) 229
FaeI CATG 2 cut(s) 376, 767
FatI CATG 2 cut(s) 372, 763
FauNDI CATATG 1 cut(s) 356
FblI GTMKAC 1 cut(s) 262
Fnu4HI GCNGC 4 cut(s) 181, 516, 519, 834
FokI GGATG 3 cut(s) 293, 470, 697
Fsp4HI GCNGC 4 cut(s) 181, 516, 519, 834
GluI GCNGC 4 cut(s) 181, 516, 519, 834
GsuI CTGGAG 1 cut(s) 503
HaeIII GGCC 2 cut(s) 195, 216
HapII CCGG 4 cut(s) 120, 266, 278, 611
Hin1II CATG 2 cut(s) 376, 767
HinfI GANTC 2 cut(s) 305, 689
HpaII CCGG 4 cut(s) 120, 266, 278, 611
HphI GGTGA 1 cut(s) 223
Hpy166II GTNNAC 2 cut(s) 263, 736
Hpy188I TCNGA 8 cut(s) 135, 342, 457, 478, 497, 534, 669, 711
Hpy188III TCNNGA 3 cut(s) 591, 611, 764
Hpy8I GTNNAC 2 cut(s) 263, 736
Hpy99I CGWCG 1 cut(s) 457
HpyAV CCTTC 2 cut(s) 307, 337
HpyCH4III ACNGT 1 cut(s) 603
HpyCH4V TGCA 6 cut(s) 372, 521, 545, 606, 633, 806
HpyF10VI GCNNNNNNNGC 3 cut(s) 186, 378, 639
HpyF3I CTNAG 1 cut(s) 477
Hsp92II CATG 2 cut(s) 376, 767
Kpn2I TCCGGA 1 cut(s) 610
Kzo9I GATC 3 cut(s) 76, 268, 748
LmnI GCTCC 1 cut(s) 398
Lsp1109I GCAGC 4 cut(s) 192, 505, 527, 820
LweI GCATC 1 cut(s) 271
MaeIII GTNAC 2 cut(s) 166, 419
MalI GATC 3 cut(s) 78, 270, 750
MbiI CCGCTC 1 cut(s) 393
MboI GATC 3 cut(s) 76, 268, 748
MboII GAAGA 1 cut(s) 521
MflI RGATCY 1 cut(s) 268
MhlI GDGCHC 1 cut(s) 778
MlsI TGGCCA 1 cut(s) 216
MluCI AATT 6 cut(s) 27, 472, 594, 718, 814, 864
MluNI TGGCCA 1 cut(s) 216
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 2 cut(s) 435, 597
Mox20I TGGCCA 1 cut(s) 216
MroI TCCGGA 1 cut(s) 610
MscI TGGCCA 1 cut(s) 216
MseI TTAA 2 cut(s) 491, 863
Msp20I TGGCCA 1 cut(s) 216
MspA1I CMGCKG 1 cut(s) 518
MspI CCGG 4 cut(s) 120, 266, 278, 611
MspR9I CCNGG 1 cut(s) 120
Mva1269I GAATGC 1 cut(s) 606
MwoI GCNNNNNNNGC 3 cut(s) 186, 378, 639
NciI CCSGG 1 cut(s) 120
NdeI CATATG 1 cut(s) 356
NdeII GATC 3 cut(s) 76, 268, 748
NlaIII CATG 2 cut(s) 376, 767
NmeAIII GCCGAG 1 cut(s) 287
NmuCI GTSAC 1 cut(s) 166
PagI TCATGA 1 cut(s) 763
PaqCI CACCTGC 1 cut(s) 512
PctI GAATGC 1 cut(s) 606
PfeI GAWTC 1 cut(s) 689
PkrI GCNGC 4 cut(s) 182, 517, 520, 835
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
PstI CTGCAG 1 cut(s) 523
PstNI CAGNNNCTG 1 cut(s) 639
PsuI RGATCY 1 cut(s) 268
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 4 cut(s) 54, 378, 501, 600
RsaNI GTAC 4 cut(s) 53, 377, 500, 599
SaqAI TTAA 2 cut(s) 491, 863
SatI GCNGC 4 cut(s) 181, 516, 519, 834
Sau3AI GATC 3 cut(s) 76, 268, 748
ScaI AGTACT 1 cut(s) 501
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 1 cut(s) 120
SduI GDGCHC 1 cut(s) 778
SfaNI GCATC 1 cut(s) 271
SfcI CTRYAG 1 cut(s) 519
SmlI CTYRAG 1 cut(s) 10
SmoI CTYRAG 1 cut(s) 10
Sse9I AATT 6 cut(s) 27, 472, 594, 718, 814, 864
SsiI CCGC 1 cut(s) 391
StyD4I CCNGG 1 cut(s) 118
TaaI ACNGT 1 cut(s) 603
TaqI TCGA 2 cut(s) 431, 462
TasI AATT 6 cut(s) 27, 472, 594, 718, 814, 864
TatI WGTACW 2 cut(s) 499, 598
TfiI GAWTC 1 cut(s) 689
Tru1I TTAA 2 cut(s) 491, 863
Tru9I TTAA 2 cut(s) 491, 863
TscAI CASTG 1 cut(s) 608
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 4 cut(s) 180, 515, 518, 833
Tsp45I GTSAC 1 cut(s) 166
TspDTI ATGAA 2 cut(s) 389, 780
TspGWI ACGGA 1 cut(s) 563
TspRI CASTG 1 cut(s) 608
XapI RAATTY 2 cut(s) 27, 814
XmiI GTMKAC 1 cut(s) 262
ZrmI AGTACT 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.