Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001150.1

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Forward (+)

160901 .. 168320

Gene Structure 7420 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001150.1_g000032.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

atggtggtctgtagtcttggccttaaaagggatccgtttcgtcccagggatgatgacgaagacgtacaaggctccaacaaagtgaatgccattgcattgtgcagaggagacctcggactcgaaggctgtcgtagctgtctcagtgactccactcagagtctcatgcaaaactgttcctataaaacggaagctatcttatgggcagagccttgcatggtacggtactctcaagacttaatatttggtattaaggaagaggatcctgttaggtatctgcccagcccgaattacacgtcaaatgagcaagcattcaggctggtgctgaaccccttactggaaattttaagtgacaaagctgcttcgggggattctcgtcaaaaatatgcagcaggacatgcaactgttccgggatacgaaacgatatatgcacatgcacagtgcactccggacatagacaaagtcaattgcagtaattgccttaagaattgcatctctgctcttctagcatgttgcagtggaaagtcaggagcaagagttcttaaaccaagttgtaatatacggtttgagaacaatcttttctatatgtctacagccgattcacaagtaaatattccagctccagctccagctactgcaactactccagaaactccatctccacctgagcaaggaaagaagagtaacacaaaaataaatatcatcatcataattgtggttgtgattgcttttgtcactatgcttctcagtggcatatgcattttcttaagagtcaagcagccaagggtaaaacttgacaatgatactttggaagaaattagtctcgtagaatcgttacaatatgactttgaagatattagatcagcaacatatgacttttctgatgaaaataagcttggacaaggtggatttggagctgtttacaaggaggaattgttcgtggtcttctttacctccatgaagattctcgacttcgaattattcaccgtgatctcaaagccagcaacattttgttggatgaagattcctaaaattgtagattttggtatggcaaggttgtttgtgatggatcaaactcaacgagatacaaagaccatcgttgggacctatggatacatggcacctgaatatgcaagtcatggacgcttttctgtcaagtcagatgtcttcagttttggtgtgttagttcttgaaataattagtggcaagaagagtggtagttttcagaatggtgaaaatgaagacgatttgttaagctatgcgaaacaagtgaaaagcacactacgaactcaatggggttggtctagtagaatcatgctaggttgcaagtggggcggacgctgcgaggtttctcctggtaataggaggtgtgcgccagtggtcgatgccggcaaggtattgagtgcagcaaggcttttgcttggtcgctcggagaggttggcgggtaacaatatcgaggctggtcgaggcaactttgatgaagagattttgtcgactttgccggggattgtttcgttggtttcaggtggacagactttcgatcgggttcggcagtctctgttcggattctctgcaggaattgatgttaaggtggaccggtcggccaccggaggggtggcatcggaggatggtggcagaagaaattgggccagcgcgggttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

552

Amino Acids

60.51

Weight (kDa)

6.13

Isoelectric Point (pI)

47.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1117
AccI	GTMKAC	2 cut(s)	587, 1490
AccII	CGCG	1 cut(s)	1652
AccIII	TCCGGA	1 cut(s)	445
AciI	CCGC	3 cut(s)	1332, 1439, 1652
AclWI	GGATC	5 cut(s)	26, 39, 254, 267, 1074
AcoI	YGGCCR	1 cut(s)	1599
AcsI	RAATTY	1 cut(s)	339
AcuI	CTGAAG	1 cut(s)	1150
AfaI	GTAC	3 cut(s)	66, 219, 224
AfiI	CCNNNNNNNGG	5 cut(s)	28, 334, 668, 1098, 1608
AflII	CTTAAG	2 cut(s)	479, 763
AflIII	ACRYGT	1 cut(s)	291
AgeI	ACCGGT	1 cut(s)	1593
AgsI	TTSAA	2 cut(s)	848, 1190
AjiI	CACGTC	1 cut(s)	294
AjnI	CCWGG	2 cut(s)	44, 1351
AjuI	GAANNNNNNNTTGG	2 cut(s)	876, 908
AloI	GAACNNNNNNTCC	4 cut(s)	519, 551, 917, 949
AluBI	AGCT	9 cut(s)	135, 191, 356, 617, 623, 629, 892, 914, 1254
AluI	AGCT	9 cut(s)	135, 191, 356, 617, 623, 629, 892, 914, 1254
Alw21I	GWGCWC	1 cut(s)	443
Alw26I	GTCTC	5 cut(s)	102, 143, 164, 824, 1557
Alw44I	GTGCAC	1 cut(s)	439
AlwI	GGATC	5 cut(s)	26, 39, 254, 267, 1074
AlwNI	CAGNNNCTG	2 cut(s)	632, 1555
Aor13HI	TCCGGA	1 cut(s)	445
AoxI	GGCC	3 cut(s)	19, 1599, 1644
ApaLI	GTGCAC	1 cut(s)	439
ApeKI	GCWGC	5 cut(s)	356, 386, 775, 1338, 1403
ApoI	RAATTY	1 cut(s)	339
ArsI	GACNNNNNNTTYG	4 cut(s)	224, 256, 278, 310
AsiGI	ACCGGT	1 cut(s)	1593
AspLEI	GCGC	2 cut(s)	1372, 1652
AspS9I	GGNCC	3 cut(s)	1101, 1591, 1644
AsuC2I	CCSGG	2 cut(s)	408, 1500
AsuHPI	GGTGA	2 cut(s)	973, 1241
AsuII	TTCGAA	1 cut(s)	972
AvaII	GGWCC	2 cut(s)	1101, 1591
BaeGI	GKGCMC	1 cut(s)	443
BamHI	GGATCC	2 cut(s)	31, 259
BanI	GGYRCC	1 cut(s)	1117
BbsI	GAAGAC	4 cut(s)	66, 934, 1156, 1245
Bbv12I	GWGCWC	1 cut(s)	443
BbvI	GCAGC	5 cut(s)	343, 398, 787, 1325, 1415
BccI	CCATC	4 cut(s)	661, 1057, 1100, 1619
BciT130I	CCWGG	2 cut(s)	46, 1353
BciVI	GTATCC	2 cut(s)	404, 1103
BcnI	CCSGG	2 cut(s)	408, 1500
BcoDI	GTCTC	5 cut(s)	102, 143, 164, 824, 1557
BfaI	CTAG	3 cut(s)	503, 1302, 1316
BfmI	CTRYAG	3 cut(s)	10, 588, 1569
BfrI	CTTAAG	2 cut(s)	479, 763
BfuI	GTATCC	2 cut(s)	404, 1103
BisI	GCNGC	5 cut(s)	357, 387, 776, 1339, 1404
BlsI	GCNGC	5 cut(s)	358, 388, 777, 1340, 1405
Bme1390I	CCNGG	4 cut(s)	46, 408, 1353, 1500
Bme18I	GGWCC	2 cut(s)	1101, 1591
BmgBI	CACGTC	1 cut(s)	294
BmgT120I	GGNCC	3 cut(s)	1101, 1591, 1644
BmiI	GGNNCC	5 cut(s)	33, 73, 261, 1102, 1119
BmrFI	CCNGG	4 cut(s)	46, 408, 1353, 1500
BmsI	GCATC	3 cut(s)	498, 1372, 1625
BpiI	GAAGAC	4 cut(s)	66, 934, 1156, 1245
BplI	GAGNNNNNCTC	2 cut(s)	96, 128
BpmI	CTGGAG	3 cut(s)	603, 609, 627
Bpu10I	CCTNAGC	1 cut(s)	663
Bpu14I	TTCGAA	1 cut(s)	972
BpuEI	CTTGAG	1 cut(s)	213
BpuMI	CCSGG	2 cut(s)	408, 1500
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	5 cut(s)	44, 45, 112, 779, 1499
BsaWI	WCCGGW	3 cut(s)	445, 1593, 1604
BsaXI	ACNNNNNCTCC	6 cut(s)	519, 549, 640, 670, 917, 947
Bsc4I	CCNNNNNNNGG	5 cut(s)	28, 334, 668, 1098, 1608
Bse118I	RCCGGY	2 cut(s)	1385, 1593
Bse1I	ACTGG	2 cut(s)	339, 1373
Bse3DI	GCAATG	1 cut(s)	90
BseAI	TCCGGA	1 cut(s)	445
BseBI	CCWGG	2 cut(s)	46, 1353
BseDI	CCNNGG	5 cut(s)	44, 45, 112, 779, 1499
BseGI	GGATG	3 cut(s)	55, 1020, 1630
BseLI	CCNNNNNNNGG	5 cut(s)	28, 334, 668, 1098, 1608
BseMI	GCAATG	1 cut(s)	90
BseMII	CTCAG	4 cut(s)	154, 167, 654, 757
BseNI	ACTGG	2 cut(s)	339, 1373
BseRI	GAGGAG	1 cut(s)	120
BseSI	GKGCMC	1 cut(s)	443
BseXI	GCAGC	5 cut(s)	343, 398, 787, 1325, 1415
BseYI	CCCAGC	1 cut(s)	278
BsgI	GTGCAG	2 cut(s)	121, 1422
Bsh1236I	CGCG	1 cut(s)	1652
Bsh1285I	CGRYCG	2 cut(s)	1540, 1598
BshFI	GGCC	3 cut(s)	21, 1601, 1646
BshNI	GGYRCC	1 cut(s)	1117
BshTI	ACCGGT	1 cut(s)	1593
BsiEI	CGRYCG	2 cut(s)	1540, 1598
BsiHKAI	GWGCWC	1 cut(s)	443
BsiSI	CCGG	6 cut(s)	407, 446, 1386, 1499, 1594, 1605
BslFI	GGGAC	2 cut(s)	27, 1114
BslI	CCNNNNNNNGG	5 cut(s)	28, 334, 668, 1098, 1608
BsmAI	GTCTC	5 cut(s)	102, 143, 164, 824, 1557
BsmFI	GGGAC	2 cut(s)	27, 1114
BsmI	GAATGC	2 cut(s)	91, 308
BsnI	GGCC	3 cut(s)	21, 1601, 1646
Bso31I	GGTCTC	1 cut(s)	102
Bsp119I	TTCGAA	1 cut(s)	972
Bsp1286I	GDGCHC	1 cut(s)	443
Bsp13I	TCCGGA	1 cut(s)	445
Bsp143I	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
BspACI	CCGC	3 cut(s)	1332, 1439, 1652
BspANI	GGCC	3 cut(s)	21, 1601, 1646
BspCNI	CTCAG	4 cut(s)	153, 166, 655, 756
BspEI	TCCGGA	1 cut(s)	445
BspFNI	CGCG	1 cut(s)	1652
BspLI	GGNNCC	5 cut(s)	33, 73, 261, 1102, 1119
BspMAI	CTGCAG	1 cut(s)	1573
BspPI	GGATC	5 cut(s)	26, 39, 254, 267, 1074
BspQI	GCTCTTC	1 cut(s)	504
BspT104I	TTCGAA	1 cut(s)	972
BspT107I	GGYRCC	1 cut(s)	1117
BspTI	CTTAAG	2 cut(s)	479, 763
BspTNI	GGTCTC	1 cut(s)	102
BsrDI	GCAATG	1 cut(s)	90
BsrFI	RCCGGY	2 cut(s)	1385, 1593
BsrI	ACTGG	2 cut(s)	339, 1373
BssAI	RCCGGY	2 cut(s)	1385, 1593
BssECI	CCNNGG	5 cut(s)	44, 45, 112, 779, 1499
BssMI	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
BssT1I	CCWWGG	1 cut(s)	779
Bst2UI	CCWGG	2 cut(s)	46, 1353
Bst4CI	ACNGT	6 cut(s)	173, 222, 403, 438, 561, 985
Bst6I	CTCTTC	5 cut(s)	249, 504, 671, 1202, 1473
BstAFI	CTTAAG	2 cut(s)	479, 763
BstAPI	GCANNNNNTGC	2 cut(s)	395, 474
BstBI	TTCGAA	1 cut(s)	972
BstC8I	GCNNGC	4 cut(s)	306, 999, 1387, 1648
BstDEI	CTNAG	4 cut(s)	140, 153, 663, 743
BstENI	CCTNNNNNAGG	1 cut(s)	666
BstF5I	GGATG	3 cut(s)	55, 1020, 1630
BstFNI	CGCG	1 cut(s)	1652
BstHHI	GCGC	2 cut(s)	1372, 1652
BstKTI	GATC	6 cut(s)	34, 262, 860, 990, 1069, 1540
BstMAI	GTCTC	5 cut(s)	102, 143, 164, 824, 1557
BstMBI	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
BstMCI	CGRYCG	2 cut(s)	1540, 1598
BstMWI	GCNNNNNNNGC	6 cut(s)	132, 395, 474, 503, 1329, 1338
BstNI	CCWGG	2 cut(s)	46, 1353
BstNSI	RCATGY	3 cut(s)	398, 434, 510
BstSCI	CCNGG	4 cut(s)	44, 406, 1351, 1498
BstSFI	CTRYAG	3 cut(s)	10, 588, 1569
BstSLI	GKGCMC	1 cut(s)	443
BstUI	CGCG	1 cut(s)	1652
BstV1I	GCAGC	5 cut(s)	343, 398, 787, 1325, 1415
BstV2I	GAAGAC	4 cut(s)	66, 934, 1156, 1245
BstX2I	RGATCY	2 cut(s)	31, 259
BstYI	RGATCY	2 cut(s)	31, 259
BsuI	GTATCC	2 cut(s)	404, 1103
BsuRI	GGCC	3 cut(s)	21, 1601, 1646
BtrI	CACGTC	1 cut(s)	294
BtsCI	GGATG	3 cut(s)	55, 1020, 1630
BtsI	GCAGTG	1 cut(s)	520
BtsIMutI	CAGTG	5 cut(s)	148, 443, 520, 751, 1380
Cac8I	GCNNGC	4 cut(s)	306, 999, 1387, 1648
CaiI	CAGNNNCTG	2 cut(s)	632, 1555
CfoI	GCGC	2 cut(s)	1372, 1652
Cfr10I	RCCGGY	2 cut(s)	1385, 1593
Cfr13I	GGNCC	3 cut(s)	1101, 1591, 1644
CseI	GACGC	2 cut(s)	1149, 1344
Csp6I	GTAC	3 cut(s)	65, 218, 223
CspAI	ACCGGT	1 cut(s)	1593
CspCI	CAANNNNNGTGG	2 cut(s)	1192, 1227
CviAII	CATG	9 cut(s)	163, 214, 395, 431, 507, 955, 1114, 1136, 1312
CviQI	GTAC	3 cut(s)	65, 218, 223
DdeI	CTNAG	4 cut(s)	140, 153, 663, 743
DpnI	GATC	6 cut(s)	33, 261, 859, 989, 1068, 1539
DpnII	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
EaeI	YGGCCR	1 cut(s)	1599
Eam1104I	CTCTTC	5 cut(s)	249, 504, 671, 1202, 1473
EarI	CTCTTC	5 cut(s)	249, 504, 671, 1202, 1473
EciI	GGCGGA	1 cut(s)	1347
Eco130I	CCWWGG	1 cut(s)	779
Eco31I	GGTCTC	1 cut(s)	102
Eco47I	GGWCC	2 cut(s)	1101, 1591
Eco57I	CTGAAG	1 cut(s)	1150
EcoNI	CCTNNNNNAGG	1 cut(s)	666
EcoO109I	RGGNCCY	1 cut(s)	1101
EcoRII	CCWGG	2 cut(s)	44, 1351
EcoT14I	CCWWGG	1 cut(s)	779
EcoT22I	ATGCAT	1 cut(s)	758
ErhI	CCWWGG	1 cut(s)	779
FaeI	CATG	9 cut(s)	166, 217, 398, 434, 510, 958, 1117, 1139, 1315
FaqI	GGGAC	2 cut(s)	27, 1114
FatI	CATG	9 cut(s)	162, 213, 394, 430, 506, 954, 1113, 1135, 1311
FauI	CCCGC	2 cut(s)	1432, 1645
FauNDI	CATATG	2 cut(s)	752, 868
FblI	GTMKAC	2 cut(s)	587, 1490
Fnu4HI	GCNGC	5 cut(s)	357, 387, 776, 1339, 1404
FokI	GGATG	3 cut(s)	62, 1027, 1637
Fsp4HI	GCNGC	5 cut(s)	357, 387, 776, 1339, 1404
FspBI	CTAG	3 cut(s)	503, 1302, 1316
GlaI	GCGC	2 cut(s)	1371, 1651
GluI	GCNGC	5 cut(s)	357, 387, 776, 1339, 1404
GsaI	CCCAGC	1 cut(s)	282
GsuI	CTGGAG	3 cut(s)	603, 609, 627
HaeIII	GGCC	3 cut(s)	21, 1601, 1646
HapII	CCGG	6 cut(s)	407, 446, 1386, 1499, 1594, 1605
HgaI	GACGC	2 cut(s)	1149, 1344
HhaI	GCGC	2 cut(s)	1372, 1652
Hin1II	CATG	9 cut(s)	166, 217, 398, 434, 510, 958, 1117, 1139, 1315
Hin6I	GCGC	2 cut(s)	1370, 1650
HinP1I	GCGC	2 cut(s)	1370, 1650
HincII	GTYRAC	1 cut(s)	1491
HindII	GTYRAC	1 cut(s)	1491
HindIII	AAGCTT	1 cut(s)	890
HpaII	CCGG	6 cut(s)	407, 446, 1386, 1499, 1594, 1605
HphI	GGTGA	2 cut(s)	973, 1241
Hpy166II	GTNNAC	6 cut(s)	441, 588, 919, 1491, 1526, 1591
Hpy188I	TCNGA	8 cut(s)	116, 156, 880, 1159, 1224, 1429, 1562, 1621
Hpy188III	TCNNGA	6 cut(s)	230, 446, 525, 644, 965, 1187
Hpy8I	GTNNAC	6 cut(s)	441, 588, 919, 1491, 1526, 1591
HpyAV	CCTTC	1 cut(s)	116
HpyCH4III	ACNGT	6 cut(s)	173, 222, 403, 438, 561, 985
HpyCH4IV	ACGT	2 cut(s)	63, 293
HpyF10VI	GCNNNNNNNGC	6 cut(s)	132, 395, 474, 503, 1329, 1338
HpyF3I	CTNAG	4 cut(s)	140, 153, 663, 743
HpySE526I	ACGT	2 cut(s)	63, 293
Hsp92II	CATG	9 cut(s)	166, 217, 398, 434, 510, 958, 1117, 1139, 1315
HspAI	GCGC	2 cut(s)	1370, 1650
Kpn2I	TCCGGA	1 cut(s)	445
KroI	GCCGGC	1 cut(s)	1385
KroNI	GCCGGC	1 cut(s)	1387
Kzo9I	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
LguI	GCTCTTC	1 cut(s)	504
LmnI	GCTCC	5 cut(s)	77, 527, 622, 628, 911
Lsp1109I	GCAGC	5 cut(s)	343, 398, 787, 1325, 1415
LweI	GCATC	3 cut(s)	498, 1372, 1625
MaeI	CTAG	3 cut(s)	503, 1302, 1316
MaeII	ACGT	2 cut(s)	63, 293
MaeIII	GTNAC	6 cut(s)	143, 347, 680, 730, 831, 1442
MalI	GATC	6 cut(s)	33, 261, 859, 989, 1068, 1539
MboI	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
MfeI	CAATTG	1 cut(s)	463
MflI	RGATCY	2 cut(s)	31, 259
MhlI	GDGCHC	1 cut(s)	443
MlyI	GAGTC	4 cut(s)	111, 140, 166, 777
MmeI	TCCRAC	2 cut(s)	99, 992
Mph1103I	ATGCAT	1 cut(s)	758
MroI	TCCGGA	1 cut(s)	445
MroNI	GCCGGC	1 cut(s)	1385
MseI	TTAA	9 cut(s)	24, 236, 249, 344, 480, 540, 764, 1250, 1584
MslI	CAYNNNNRTG	1 cut(s)	710
MspCI	CTTAAG	2 cut(s)	479, 763
MspI	CCGG	6 cut(s)	407, 446, 1386, 1499, 1594, 1605
MspR9I	CCNGG	4 cut(s)	46, 408, 1353, 1500
MunI	CAATTG	1 cut(s)	463
Mva1269I	GAATGC	2 cut(s)	91, 308
MvaI	CCWGG	2 cut(s)	46, 1353
MvnI	CGCG	1 cut(s)	1652
MwoI	GCNNNNNNNGC	6 cut(s)	132, 395, 474, 503, 1329, 1338
NaeI	GCCGGC	1 cut(s)	1387
NciI	CCSGG	2 cut(s)	408, 1500
NdeI	CATATG	2 cut(s)	752, 868
NdeII	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
NgoMIV	GCCGGC	1 cut(s)	1385
NlaIII	CATG	9 cut(s)	166, 217, 398, 434, 510, 958, 1117, 1139, 1315
NlaIV	GGNNCC	5 cut(s)	33, 73, 261, 1102, 1119
NmuCI	GTSAC	3 cut(s)	143, 347, 730
NsiI	ATGCAT	1 cut(s)	758
NspI	RCATGY	3 cut(s)	398, 434, 510
NspV	TTCGAA	1 cut(s)	972
PasI	CCCWGGG	1 cut(s)	45
PciSI	GCTCTTC	1 cut(s)	504
PctI	GAATGC	2 cut(s)	91, 308
PdiI	GCCGGC	1 cut(s)	1387
PfeI	GAWTC	7 cut(s)	368, 596, 827, 961, 1021, 1308, 1563
PflFI	GACNNNGTC	1 cut(s)	458
PfoI	TCCNGGA	1 cut(s)	406
PinAI	ACCGGT	1 cut(s)	1593
PkrI	GCNGC	5 cut(s)	358, 388, 777, 1340, 1405
Ple19I	CGATCG	1 cut(s)	1540
PleI	GAGTC	4 cut(s)	111, 140, 165, 776
PpsI	GAGTC	4 cut(s)	111, 140, 165, 776
PpuMI	RGGWCCY	1 cut(s)	1101
Psp5II	RGGWCCY	1 cut(s)	1101
Psp6I	CCWGG	2 cut(s)	44, 1351
PspFI	CCCAGC	1 cut(s)	278
PspGI	CCWGG	2 cut(s)	44, 1351
PspN4I	GGNNCC	5 cut(s)	33, 73, 261, 1102, 1119
PspPI	GGNCC	3 cut(s)	1101, 1591, 1644
PspPPI	RGGWCCY	1 cut(s)	1101
PstI	CTGCAG	1 cut(s)	1573
PstNI	CAGNNNCTG	2 cut(s)	632, 1555
PsuI	RGATCY	2 cut(s)	31, 259
PsyI	GACNNNGTC	1 cut(s)	458
PvuI	CGATCG	1 cut(s)	1540
RsaI	GTAC	3 cut(s)	66, 219, 224
RsaNI	GTAC	3 cut(s)	65, 218, 223
RseI	CAYNNNNRTG	1 cut(s)	710
SalI	GTCGAC	1 cut(s)	1489
SapI	GCTCTTC	1 cut(s)	504
SaqAI	TTAA	9 cut(s)	24, 236, 249, 344, 480, 540, 764, 1250, 1584
SatI	GCNGC	5 cut(s)	357, 387, 776, 1339, 1404
Sau3AI	GATC	6 cut(s)	31, 259, 857, 987, 1066, 1537
Sau96I	GGNCC	3 cut(s)	1101, 1591, 1644
SchI	GAGTC	4 cut(s)	111, 140, 166, 777
ScrFI	CCNGG	4 cut(s)	46, 408, 1353, 1500
SduI	GDGCHC	1 cut(s)	443
SfaNI	GCATC	3 cut(s)	498, 1372, 1625
SfcI	CTRYAG	3 cut(s)	10, 588, 1569
SfuI	TTCGAA	1 cut(s)	972
SinI	GGWCC	2 cut(s)	1101, 1591
SmiMI	CAYNNNNRTG	1 cut(s)	710
SmlI	CTYRAG	3 cut(s)	228, 479, 763
SmoI	CTYRAG	3 cut(s)	228, 479, 763
SsiI	CCGC	3 cut(s)	1332, 1439, 1652
SspI	AATATT	2 cut(s)	240, 610
SspMI	CTAG	3 cut(s)	503, 1302, 1316
StyD4I	CCNGG	4 cut(s)	44, 406, 1351, 1498
StyI	CCWWGG	1 cut(s)	779
TaaI	ACNGT	6 cut(s)	173, 222, 403, 438, 561, 985
TaiI	ACGT	2 cut(s)	66, 296
TaqI	TCGA	8 cut(s)	120, 966, 972, 1380, 1452, 1462, 1490, 1536
TfiI	GAWTC	7 cut(s)	368, 596, 827, 961, 1021, 1308, 1563
Tru1I	TTAA	9 cut(s)	24, 236, 249, 344, 480, 540, 764, 1250, 1584
Tru9I	TTAA	9 cut(s)	24, 236, 249, 344, 480, 540, 764, 1250, 1584
TscAI	CASTG	5 cut(s)	148, 443, 520, 751, 1380
TseFI	GTSAC	3 cut(s)	143, 347, 730
TseI	GCWGC	5 cut(s)	356, 386, 775, 1338, 1403
Tsp45I	GTSAC	3 cut(s)	143, 347, 730
TspDTI	ATGAA	5 cut(s)	897, 971, 1031, 1251, 1491
TspGWI	ACGGA	2 cut(s)	24, 200
TspRI	CASTG	5 cut(s)	148, 443, 520, 751, 1380
Tth111I	GACNNNGTC	1 cut(s)	458
Vha464I	CTTAAG	2 cut(s)	479, 763
VneI	GTGCAC	1 cut(s)	439
VpaK11BI	GGWCC	2 cut(s)	1101, 1591
XagI	CCTNNNNNAGG	1 cut(s)	666
XapI	RAATTY	1 cut(s)	339
XceI	RCATGY	3 cut(s)	398, 434, 510
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1609
XmiI	GTMKAC	2 cut(s)	587, 1490
XspI	CTAG	3 cut(s)	503, 1302, 1316
Zsp2I	ATGCAT	1 cut(s)	758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.