Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000086

Physical Location & Seq

Genomic Coordinates Reverse (-)

27196717 .. 27200119

Gene Structure 3403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00022110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGTTTTCTCAAAAATTGGATTCTTTCTTTGTATGCTGCAACTACTTGTGTTAGTTCTTACTGCCGAAGCCCTTGTTCCACAGGTACTTCTGTCCATCAATTGTCTGGGTAGTAACTCGACCGATAACAGTACTTTCTTGAGAAACCTCAATACCCTTCTCCCTACTCTACCCTCTGCAGGCAACGGCTATGGTTTTTACAACTCCTCTCACGGTGAAAATGAAGATAAAGTCTATGCAGTTGCACTCTGCAGACCATTTGTTGAGCCGGATGCCTGTGTCGATTGCCTCAGTTTCGCTAGCGACCAGGTCAAGCTGGCATGCCCTCTTCAGCAGGAGGCTGTTGCATGGTACGACAATTGTACCTTACACTACTCGGACAAGTCCATCTACAGCATCATGAAAACTACTCCTTCTTACAGTAGATGGAACGAACAAAACGTATCAACAGCGGATGTGGATGGGTTCTACAACCAGTTCATAGCCTTGATGGAAAGACTAAGTGGTCAAGCCGCAGCGAATGGTCCTCTTCTCAAGTGTGCGGTGGGAAATTTAACCCCTCCAGGTATGTATCAAACAATATATACCTTCCTGCAGTGCACTCCAGATCTGTCCCTGGAAGACTGCAGTGATTGCCTAACAACAGCTCGGTCAGATGTCAGAAATTTTTTCTTCGCAAAAAAAATTGCGGTTATCATTCACCCCAGCTGTACCATAAGAGTTCAGGATTCTGTATTCTATGAACCTGAAAGTATTGAAGCACTATTACTATCAGCGAATGGTACAACTTCAGGAAAGAAGCAGAGTAATAAAGCTCGGACTATAATCACTATTGTAGTGATAATTGTTGTTTCTCTGGTACTGGTTATACTTATATGCATTTGCATTTACGGTAGAATCAGGAAGACAGAGAAAAACCTTGGAGGCTCATCTGAAGTGAGAAGTGCAGAAACATATGACCTGCAAGTCCCCTTTCACTCTATTAGAGATGCAACGAATGACTTTTCTGAATCAAATAAGCTCGGACGGGGTGGATTTGGTGTTGTTTACAGGGGTAGGCTTTGGGACGAGATAGATGTAGCAGTGAAAAGGCTTTCTAGAGATTCTTCACAAGGAGATATAGAATTCAAAAATGAGGTTGGACTACTGGCCAAACTTCAGCATCGGAATTTAGTTAGGCTCATTGGTTTCTGCCTGGAAGGAAGCGAAAGAATTCTTATCTATGAGTTTGTTCCAAACGCAAGTCTCGATCATTTCATATTTGATCCAATCAAGCGCGAACAGTTGGATTGGGATATTCGCTACAAGATCATAATAGGCATTGGGCGGGGACTCCTTTACCTTCATGAAGATTCCCGTCTTAAAATTATCCATCGTGATCTAAAAGCTAGTAACATTCTGTTAGATTCAGAAATGAACCCCAAAATTGCAGATTTCGGATTGGCAAGATTATTTGATACGGATCAAACACGAGTCAACCTTGTTGTTGTTGATATGCAGCGGATATATGGCTCCAGACATGAAGAAGATGCAGAGGTTCTTCTAAGCTACGCCTGGAATAGTTGGAGGGAGGGGACAGCCTTGAACTTAATAGATCCCATGCTAAGAAGTGGTTTTTCAGGACCTCAAATAATGAGATGTATTCACATTGCATTGTTGTGTGTGCAACAAAGTGCAGCTGCTAGGCCAACCATGGCTGCAGTTAACCACATGTATAGCAGCAACTCTCTCGCTCTCCCTGCACCCTCACAACCAGCATTCTTTATGCCTGGGGGCATTGGATCCTCATCCAACACATCGTCGGGAGGGGAGAACAAACCCAGAAACTTGATCCAAAATTCAGCACAGCATATGGATATGATTACGGAGCTGTTTCCTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

627

Amino Acids

69.76

Weight (kDa)

6.0

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	38 - 127	1.5e-21	Salt stress response/antifungal
Stress-antifung	PF01657	154 - 243	5.8e-07	Salt stress response/antifungal
Pkinase	PF00069	336 - 492	1.2e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	338 - 489	1.4e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000086)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca	FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica	MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica	Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis	pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis	RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata	RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora	Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii	Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa	Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha	Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana	Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	504, 965
Acc36I	ACCTGC	1 cut(s)	969
AccII	CGCG	1 cut(s)	1278
AciI	CCGC	6 cut(s)	452, 513, 542, 689, 1327, 1501
AclWI	GGATC	6 cut(s)	1259, 1470, 1589, 1776, 1789, 1825
AcoI	YGGCCR	1 cut(s)	1149
AcsI	RAATTY	6 cut(s)	550, 664, 1124, 1168, 1212, 1837
AcuI	CTGAAG	4 cut(s)	314, 774, 954, 1142
AfaI	GTAC	7 cut(s)	87, 133, 353, 364, 712, 784, 861
AfiI	CCNNNNNNNGG	1 cut(s)	179
AflIII	ACRYGT	1 cut(s)	1710
AgsI	TTSAA	3 cut(s)	758, 1129, 1585
AjnI	CCWGG	6 cut(s)	306, 562, 615, 1194, 1553, 1768
AluBI	AGCT	9 cut(s)	316, 647, 708, 815, 1021, 1388, 1548, 1679, 1870
AluI	AGCT	9 cut(s)	316, 647, 708, 815, 1021, 1388, 1548, 1679, 1870
Alw21I	GWGCWC	1 cut(s)	602
Alw26I	GTCTC	1 cut(s)	1250
Alw44I	GTGCAC	1 cut(s)	598
AlwI	GGATC	6 cut(s)	1259, 1470, 1589, 1776, 1789, 1825
AoxI	GGCC	2 cut(s)	1149, 1685
ApaLI	GTGCAC	1 cut(s)	598
ApeKI	GCWGC	7 cut(s)	37, 515, 1498, 1676, 1679, 1697, 1719
ApoI	RAATTY	6 cut(s)	550, 664, 1124, 1168, 1212, 1837
Asp700I	GAANNNNTTC	1 cut(s)	1212
AspLEI	GCGC	1 cut(s)	1278
AspS9I	GGNCC	2 cut(s)	524, 1622
AsuHPI	GGTGA	2 cut(s)	227, 692
AsuNHI	GCTAGC	1 cut(s)	299
AvaII	GGWCC	2 cut(s)	524, 1622
BaeGI	GKGCMC	1 cut(s)	602
BaeI	ACNNNNGTAYC	4 cut(s)	77, 110, 346, 379
BalI	TGGCCA	1 cut(s)	1151
BamHI	GGATCC	1 cut(s)	1781
BarI	GAAGNNNNNNTAC	2 cut(s)	750, 782
BauI	CACGAG	1 cut(s)	1470
BbsI	GAAGAC	2 cut(s)	627, 911
Bbv12I	GWGCWC	1 cut(s)	602
BbvI	GCAGC	7 cut(s)	24, 527, 1510, 1666, 1684, 1688, 1731
BccI	CCATC	6 cut(s)	104, 395, 420, 455, 484, 1380
BceAI	ACGGC	1 cut(s)	202
BcgI	CGANNNNNNTGC	2 cut(s)	1711, 1745
BciT130I	CCWGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
BcoDI	GTCTC	1 cut(s)	1250
BfaI	CTAG	5 cut(s)	300, 1098, 1389, 1683, 1882
BfmI	CTRYAG	6 cut(s)	177, 250, 391, 593, 625, 1698
BfuAI	ACCTGC	1 cut(s)	969
BglII	AGATCT	1 cut(s)	607
BisI	GCNGC	8 cut(s)	38, 513, 516, 1499, 1677, 1680, 1698, 1720
BlsI	GCNGC	8 cut(s)	39, 514, 517, 1500, 1678, 1681, 1699, 1721
BmcAI	AGTACT	1 cut(s)	133
Bme1390I	CCNGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
Bme18I	GGWCC	2 cut(s)	524, 1622
BmgT120I	GGNCC	2 cut(s)	524, 1622
BmiI	GGNNCC	2 cut(s)	1513, 1783
BmrFI	CCNGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
BmsI	GCATC	5 cut(s)	262, 405, 979, 1171, 1519
BmtI	GCTAGC	1 cut(s)	303
BpiI	GAAGAC	2 cut(s)	627, 911
BpmI	CTGGAG	3 cut(s)	546, 588, 1498
BpuEI	CTTGAG	2 cut(s)	160, 518
BsaBI	GATNNNNATC	2 cut(s)	1461, 1786
BsaJI	CCNNGG	4 cut(s)	615, 919, 1692, 1769
Bsc4I	CCNNNNNNNGG	1 cut(s)	179
Bse1I	ACTGG	3 cut(s)	475, 867, 1152
Bse3DI	GCAATG	1 cut(s)	1647
Bse8I	GATNNNNATC	2 cut(s)	1461, 1786
BseBI	CCWGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
BseDI	CCNNGG	4 cut(s)	615, 919, 1692, 1769
BseGI	GGATG	4 cut(s)	277, 460, 466, 1787
BseJI	GATNNNNATC	2 cut(s)	1461, 1786
BseLI	CCNNNNNNNGG	1 cut(s)	179
BseMI	GCAATG	1 cut(s)	1647
BseMII	CTCAG	1 cut(s)	304
BseNI	ACTGG	3 cut(s)	475, 867, 1152
BseRI	GAGGAG	1 cut(s)	196
BseSI	GKGCMC	1 cut(s)	602
BseXI	GCAGC	7 cut(s)	24, 527, 1510, 1666, 1684, 1688, 1731
BseYI	CCCAGC	1 cut(s)	704
BsgI	GTGCAG	3 cut(s)	966, 1695, 1725
Bsh1236I	CGCG	1 cut(s)	1278
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	2 cut(s)	1151, 1687
BsiEI	CGRYCG	1 cut(s)	123
BsiHKAI	GWGCWC	1 cut(s)	602
BsiSI	CCGG	1 cut(s)	269
BslFI	GGGAC	5 cut(s)	598, 953, 1079, 1344, 1588
BslI	CCNNNNNNNGG	1 cut(s)	179
BsmAI	GTCTC	1 cut(s)	1250
BsmFI	GGGAC	5 cut(s)	598, 953, 1079, 1344, 1588
BsmI	GAATGC	1 cut(s)	1757
BsnI	GGCC	2 cut(s)	1151, 1687
Bsp1286I	GDGCHC	1 cut(s)	602
Bsp143I	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
Bsp19I	CCATGG	1 cut(s)	1692
BspACI	CCGC	6 cut(s)	452, 513, 542, 689, 1327, 1501
BspANI	GGCC	2 cut(s)	1151, 1687
BspCNI	CTCAG	1 cut(s)	303
BspFNI	CGCG	1 cut(s)	1278
BspHI	TCATGA	2 cut(s)	399, 1345
BspLI	GGNNCC	2 cut(s)	1513, 1783
BspMAI	CTGCAG	5 cut(s)	181, 254, 597, 629, 1702
BspMI	ACCTGC	1 cut(s)	969
BspOI	GCTAGC	1 cut(s)	303
BspPI	GGATC	6 cut(s)	1259, 1470, 1589, 1776, 1789, 1825
BsrDI	GCAATG	1 cut(s)	1647
BsrI	ACTGG	3 cut(s)	475, 867, 1152
BssECI	CCNNGG	4 cut(s)	615, 919, 1692, 1769
BssMI	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
BssSI	CACGAG	1 cut(s)	1470
BssT1I	CCWWGG	2 cut(s)	919, 1692
Bst2BI	CACGAG	1 cut(s)	1470
Bst2UI	CCWGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
Bst4CI	ACNGT	5 cut(s)	131, 215, 422, 893, 1284
Bst6I	CTCTTC	2 cut(s)	333, 534
BstAPI	GCANNNNNTGC	1 cut(s)	633
BstC8I	GCNNGC	4 cut(s)	181, 301, 318, 322
BstDEI	CTNAG	4 cut(s)	290, 500, 1544, 1604
BstDSI	CCRYGG	1 cut(s)	1692
BstF5I	GGATG	4 cut(s)	277, 460, 466, 1787
BstFNI	CGCG	1 cut(s)	1278
BstHHI	GCGC	1 cut(s)	1278
BstKTI	GATC	9 cut(s)	610, 1252, 1267, 1311, 1381, 1465, 1597, 1784, 1833
BstMAI	GTCTC	1 cut(s)	1250
BstMBI	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
BstMCI	CGRYCG	1 cut(s)	123
BstMWI	GCNNNNNNNGC	2 cut(s)	633, 1739
BstNI	CCWGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
BstNSI	RCATGY	2 cut(s)	324, 1714
BstSCI	CCNGG	6 cut(s)	306, 562, 615, 1194, 1553, 1768
BstSFI	CTRYAG	6 cut(s)	177, 250, 391, 593, 625, 1698
BstSLI	GKGCMC	1 cut(s)	602
BstUI	CGCG	1 cut(s)	1278
BstV1I	GCAGC	7 cut(s)	24, 527, 1510, 1666, 1684, 1688, 1731
BstV2I	GAAGAC	2 cut(s)	627, 911
BstX2I	RGATCY	3 cut(s)	607, 1594, 1781
BstYI	RGATCY	3 cut(s)	607, 1594, 1781
BsuRI	GGCC	2 cut(s)	1151, 1687
BtgI	CCRYGG	1 cut(s)	1692
BtsCI	GGATG	4 cut(s)	277, 460, 466, 1787
BtsI	GCAGTG	3 cut(s)	602, 634, 1089
BtsIMutI	CAGTG	3 cut(s)	602, 634, 1089
BveI	ACCTGC	1 cut(s)	969
Cac8I	GCNNGC	4 cut(s)	181, 301, 318, 322
CciI	TCATGA	2 cut(s)	399, 1345
CfoI	GCGC	1 cut(s)	1278
Cfr13I	GGNCC	2 cut(s)	524, 1622
CsiI	ACCWGGT	1 cut(s)	306
Csp6I	GTAC	7 cut(s)	86, 132, 352, 363, 711, 783, 860
CviAII	CATG	8 cut(s)	321, 348, 400, 1346, 1520, 1600, 1693, 1711
CviQI	GTAC	7 cut(s)	86, 132, 352, 363, 711, 783, 860
DdeI	CTNAG	4 cut(s)	290, 500, 1544, 1604
DpnI	GATC	9 cut(s)	609, 1251, 1266, 1310, 1380, 1464, 1596, 1783, 1832
DpnII	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
DrdI	GACNNNNNNGTC	2 cut(s)	504, 965
DseDI	GACNNNNNNGTC	2 cut(s)	504, 965
EaeI	YGGCCR	1 cut(s)	1149
Eam1104I	CTCTTC	2 cut(s)	333, 534
EarI	CTCTTC	2 cut(s)	333, 534
Eco130I	CCWWGG	2 cut(s)	919, 1692
Eco47I	GGWCC	2 cut(s)	524, 1622
Eco57I	CTGAAG	4 cut(s)	314, 774, 954, 1142
EcoO109I	RGGNCCY	1 cut(s)	1622
EcoRI	GAATTC	2 cut(s)	1124, 1212
EcoRII	CCWGG	6 cut(s)	306, 562, 615, 1194, 1553, 1768
EcoT14I	CCWWGG	2 cut(s)	919, 1692
EcoT22I	ATGCAT	1 cut(s)	881
ErhI	CCWWGG	2 cut(s)	919, 1692
FaeI	CATG	8 cut(s)	324, 351, 403, 1349, 1523, 1603, 1696, 1714
FaqI	GGGAC	5 cut(s)	598, 953, 1079, 1344, 1588
FatI	CATG	8 cut(s)	320, 347, 399, 1345, 1519, 1599, 1692, 1710
FauI	CCCGC	1 cut(s)	1320
FauNDI	CATATG	2 cut(s)	955, 1851
Fnu4HI	GCNGC	8 cut(s)	38, 513, 516, 1499, 1677, 1680, 1698, 1720
FokI	GGATG	4 cut(s)	284, 467, 473, 1774
Fsp4HI	GCNGC	8 cut(s)	38, 513, 516, 1499, 1677, 1680, 1698, 1720
FspBI	CTAG	5 cut(s)	300, 1098, 1389, 1683, 1882
GlaI	GCGC	1 cut(s)	1277
GluI	GCNGC	8 cut(s)	38, 513, 516, 1499, 1677, 1680, 1698, 1720
GsaI	CCCAGC	1 cut(s)	708
GsuI	CTGGAG	3 cut(s)	546, 588, 1498
HaeIII	GGCC	2 cut(s)	1151, 1687
HapII	CCGG	1 cut(s)	269
HhaI	GCGC	1 cut(s)	1278
Hin1II	CATG	8 cut(s)	324, 351, 403, 1349, 1523, 1603, 1696, 1714
Hin6I	GCGC	1 cut(s)	1276
HinP1I	GCGC	1 cut(s)	1276
HincII	GTYRAC	2 cut(s)	1477, 1705
HindII	GTYRAC	2 cut(s)	1477, 1705
HinfI	GANTC	9 cut(s)	21, 728, 897, 1010, 1103, 1332, 1352, 1406, 1473
HpaI	GTTAAC	1 cut(s)	1705
HpaII	CCGG	1 cut(s)	269
HphI	GGTGA	2 cut(s)	227, 692
Hpy166II	GTNNAC	4 cut(s)	600, 1048, 1477, 1705
Hpy8I	GTNNAC	4 cut(s)	600, 1048, 1477, 1705
Hpy99I	CGWCG	1 cut(s)	1804
HpyAV	CCTTC	5 cut(s)	167, 423, 598, 1193, 1352
HpyCH4III	ACNGT	5 cut(s)	131, 215, 422, 893, 1284
HpyCH4IV	ACGT	1 cut(s)	441
HpyF10VI	GCNNNNNNNGC	2 cut(s)	633, 1739
HpyF3I	CTNAG	4 cut(s)	290, 500, 1544, 1604
HpySE526I	ACGT	1 cut(s)	441
Hsp92II	CATG	8 cut(s)	324, 351, 403, 1349, 1523, 1603, 1696, 1714
HspAI	GCGC	1 cut(s)	1276
KspAI	GTTAAC	1 cut(s)	1705
Kzo9I	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
LmnI	GCTCC	2 cut(s)	1517, 1867
Lsp1109I	GCAGC	7 cut(s)	24, 527, 1510, 1666, 1684, 1688, 1731
LweI	GCATC	5 cut(s)	262, 405, 979, 1171, 1519
MabI	ACCWGGT	1 cut(s)	306
MaeI	CTAG	5 cut(s)	300, 1098, 1389, 1683, 1882
MaeII	ACGT	1 cut(s)	441
MaeIII	GTNAC	2 cut(s)	113, 1391
MalI	GATC	9 cut(s)	609, 1251, 1266, 1310, 1380, 1464, 1596, 1783, 1832
MboI	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
MfeI	CAATTG	2 cut(s)	100, 358
MflI	RGATCY	3 cut(s)	607, 1594, 1781
MhlI	GDGCHC	1 cut(s)	602
MlsI	TGGCCA	1 cut(s)	1151
MluNI	TGGCCA	1 cut(s)	1151
MlyI	GAGTC	2 cut(s)	1326, 1482
MmeI	TCCRAC	4 cut(s)	1120, 1266, 1544, 1815
Mox20I	TGGCCA	1 cut(s)	1151
Mph1103I	ATGCAT	1 cut(s)	881
MroXI	GAANNNNTTC	1 cut(s)	1212
MscI	TGGCCA	1 cut(s)	1151
MseI	TTAA	4 cut(s)	554, 1362, 1589, 1704
MslI	CAYNNNNRTG	1 cut(s)	1657
Msp20I	TGGCCA	1 cut(s)	1151
MspA1I	CMGCKG	4 cut(s)	452, 708, 1501, 1679
MspI	CCGG	1 cut(s)	269
MspR9I	CCNGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
MunI	CAATTG	2 cut(s)	100, 358
Mva1269I	GAATGC	1 cut(s)	1757
MvaI	CCWGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
MvnI	CGCG	1 cut(s)	1278
MwoI	GCNNNNNNNGC	2 cut(s)	633, 1739
NcoI	CCATGG	1 cut(s)	1692
NdeI	CATATG	2 cut(s)	955, 1851
NdeII	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
NheI	GCTAGC	1 cut(s)	299
NlaIII	CATG	8 cut(s)	324, 351, 403, 1349, 1523, 1603, 1696, 1714
NlaIV	GGNNCC	2 cut(s)	1513, 1783
NsiI	ATGCAT	1 cut(s)	881
NspI	RCATGY	2 cut(s)	324, 1714
PaeI	GCATGC	1 cut(s)	324
PagI	TCATGA	2 cut(s)	399, 1345
PciI	ACATGT	1 cut(s)	1710
PcsI	WCGNNNNNNNCGW	2 cut(s)	438, 1245
PctI	GAATGC	1 cut(s)	1757
PdmI	GAANNNNTTC	1 cut(s)	1212
PfeI	GAWTC	7 cut(s)	21, 728, 897, 1010, 1103, 1352, 1406
PflFI	GACNNNGTC	1 cut(s)	308
PkrI	GCNGC	8 cut(s)	39, 514, 517, 1500, 1678, 1681, 1699, 1721
PleI	GAGTC	2 cut(s)	1326, 1481
PpsI	GAGTC	2 cut(s)	1326, 1481
PpuMI	RGGWCCY	1 cut(s)	1622
PscI	ACATGT	1 cut(s)	1710
Psp5II	RGGWCCY	1 cut(s)	1622
Psp6I	CCWGG	6 cut(s)	306, 562, 615, 1194, 1553, 1768
PspFI	CCCAGC	1 cut(s)	704
PspGI	CCWGG	6 cut(s)	306, 562, 615, 1194, 1553, 1768
PspN4I	GGNNCC	2 cut(s)	1513, 1783
PspPI	GGNCC	2 cut(s)	524, 1622
PspPPI	RGGWCCY	1 cut(s)	1622
PstI	CTGCAG	5 cut(s)	181, 254, 597, 629, 1702
PsuI	RGATCY	3 cut(s)	607, 1594, 1781
PsyI	GACNNNGTC	1 cut(s)	308
PvuII	CAGCTG	2 cut(s)	708, 1679
RsaI	GTAC	7 cut(s)	87, 133, 353, 364, 712, 784, 861
RsaNI	GTAC	7 cut(s)	86, 132, 352, 363, 711, 783, 860
RseI	CAYNNNNRTG	1 cut(s)	1657
SaqAI	TTAA	4 cut(s)	554, 1362, 1589, 1704
SatI	GCNGC	8 cut(s)	38, 513, 516, 1499, 1677, 1680, 1698, 1720
Sau3AI	GATC	9 cut(s)	607, 1249, 1264, 1308, 1378, 1462, 1594, 1781, 1830
Sau96I	GGNCC	2 cut(s)	524, 1622
ScaI	AGTACT	1 cut(s)	133
SchI	GAGTC	2 cut(s)	1326, 1482
ScrFI	CCNGG	6 cut(s)	308, 564, 617, 1196, 1555, 1770
SduI	GDGCHC	1 cut(s)	602
SexAI	ACCWGGT	1 cut(s)	306
SfaNI	GCATC	5 cut(s)	262, 405, 979, 1171, 1519
SfcI	CTRYAG	6 cut(s)	177, 250, 391, 593, 625, 1698
SinI	GGWCC	2 cut(s)	524, 1622
SmiMI	CAYNNNNRTG	1 cut(s)	1657
SmlI	CTYRAG	2 cut(s)	139, 533
SmoI	CTYRAG	2 cut(s)	139, 533
SphI	GCATGC	1 cut(s)	324
SsiI	CCGC	6 cut(s)	452, 513, 542, 689, 1327, 1501
SspMI	CTAG	5 cut(s)	300, 1098, 1389, 1683, 1882
StyD4I	CCNGG	6 cut(s)	306, 562, 615, 1194, 1553, 1768
StyI	CCWWGG	2 cut(s)	919, 1692
TaaI	ACNGT	5 cut(s)	131, 215, 422, 893, 1284
TaiI	ACGT	1 cut(s)	444
TaqI	TCGA	3 cut(s)	119, 282, 1248
TaqII	GACCGA	2 cut(s)	137, 639
TatI	WGTACW	1 cut(s)	131
TauI	GCSGC	1 cut(s)	515
TfiI	GAWTC	7 cut(s)	21, 728, 897, 1010, 1103, 1352, 1406
Tru1I	TTAA	4 cut(s)	554, 1362, 1589, 1704
Tru9I	TTAA	4 cut(s)	554, 1362, 1589, 1704
TscAI	CASTG	3 cut(s)	602, 634, 1089
TseI	GCWGC	7 cut(s)	37, 515, 1498, 1676, 1679, 1697, 1719
TspDTI	ATGAA	9 cut(s)	237, 416, 469, 756, 1246, 1334, 1362, 1430, 1536
TspGWI	ACGGA	2 cut(s)	1475, 1880
TspRI	CASTG	3 cut(s)	602, 634, 1089
Tth111I	GACNNNGTC	1 cut(s)	308
VneI	GTGCAC	1 cut(s)	598
VpaK11BI	GGWCC	2 cut(s)	524, 1622
XapI	RAATTY	6 cut(s)	550, 664, 1124, 1168, 1212, 1837
XbaI	TCTAGA	1 cut(s)	1097
XceI	RCATGY	2 cut(s)	324, 1714
XcmI	CCANNNNNNNNNTGG	1 cut(s)	103
XmnI	GAANNNNTTC	1 cut(s)	1212
XspI	CTAG	5 cut(s)	300, 1098, 1389, 1683, 1882
ZrmI	AGTACT	1 cut(s)	133
Zsp2I	ATGCAT	1 cut(s)	881

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.