Rroxscaffold_2G00130310

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000086
Physical Location & Seq
Reverse (-)
66423942 .. 66426790
2849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00130310.1

Sequence Viewer

Length: 1851 bp
ATGATCACTCAATCCCTTGCTCAGCCAGATCTCGCAGACAAATGGTGTTTCAATGAAAAAGGTAACTACACCACTAATAGTACATACCAAACCAACCTTGACACCCTTCTCTCCTCCCTCGTCTCCACCAATGGCAACGGCTATGGCTTTTACAATTCATCCAATGCCGAAAACTTAACCAACCAAGTTTATGCAACGGGACTTTGTAGAGGAGATGTTGTAGCTGATACTTGCCGTAGCTGCCTTAAAAACTCCAGCCTTGAGCTCAGAAAACTTTGTCCTAACCAAAAAGAAGCTCTTGGGTTTTATGACACTTGCATGTTACGCTATTCAAACCGATCCCTCTATGGCCTCATGGAGGATCTCCCTGCTTTCTATTTCGTGAGTCCAAGAAACTTATCATCATCGGAAGTGGAAAAGTTCTTTGAAGATCTTGGGAATCTATTCCGAAGATTGAGTAGTGAAGCTGCAGCAGGTGGTTCACTTCGTAAATTCGCAACAAACAACACTACGTCAGGTTTCAAGACAATATATGCACTAGCCCAGTGCACGCCAGATTTGTCCGAGGAACTTTGCACTGATTGCTTGGCTGGTGCTTATGGAGACATCCCAACTAACAGTTATGGGAAGGATGGTGCCAGAATTGTTAAACCAAGTTGTAACATTCAGTATGAGATTTCTCCCTTCTACGACCCTGAAAATGTGGCACCACTGCCATCATCGCCACCAATATCTGCGCCTTCACCATCAACCAATACCACAAATTCAGAAGGTGCCGAAGATGCAGATGAAATTAGAAGTGCAGAATCCTTGCAATTCGACTTTGGCACCATCAGAGTTGCTACAGATGATTTTTCTGAAGCAAATAAACTTGGACAGGGCGGTTTTGGTTCTGTTTACAGGGGTAAACTTTCCAATGGTGAAGAGATAGCAGTGAAAAGGCTCTCTATGGATTCTGGACAAGGAGATTCAGAATTCAAAAATGAGGTCTTGCTAGTAGCTAAGCTTCAACACCGAAATTTAGTTAGACTTCTTGGCTTCTGCTTGCAAGGAAACGAAAGGCTTCTTGTCTATGAGTTTGTTCCTAACTCAAGTCTTGATCACATCATATTTGATCCAATCAAGCGCGCGCAATTGGATTGGGATAAGTGTTACAAAATCATAGAAGGCATTGCTAGAGGGCTGCTTTACCTTCATGAGGATTCTCGGCTTAGGATTATTCATCGCGATCTCAAACCTAGTAACATCTTAATAGATGCAGAATTGAACTCCAAAATTTCAGATTTTGGCATGGCAAGGTTGTTTGTGCTTGATGAAACACAAGGCAATACTAGTCGTATTGTAGGGACCTATGGATATATGGCTCCTGAGTACGCGATGCATGGACATTTTTCCGTGAAGTCTGATGTCTACAGTTTTGGCGTGTTGATCTTGGAGATAATAAGCGGACAGAAAAATAGCTGCTTCCGTCAGGGAGAGAACATGGAGGATCTTCCAAGCTATGCATGGAAGAGCTGGAGGGAAGGAACAACTTCAAATCTAATAGATCCGACATTGACGAATGGTTCAAGGACTGAAATCATGAGATGCATTCACATTGGTTTGTTATGCGTGCAAGAAAACATAGCTGATAGACCAACCACGACTTCAGTTATTCTCATGTTGAATAGCCACTCTCTCAGTCTCCCAGTACCCTCAGAACCAGCATTTTTTATGCATAGTAGCGTCGGATCAGACCTGTCCTTGGGATGGGAAAGTAGTTCAGGAGTAACAGCGTCCAAGAGCAACTTTGTCTCGGTCAAAGTACCTGAAAATGAGGCTGCATTCATCTCCGAAGTATATCCTTGCTAG

Protein Analysis

616

Amino Acids

67.99

Weight (kDa)

5.02

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 16 - 113 2.5e-24 Salt stress response/antifungal
Stress-antifung PF01657 136 - 225 7.6e-11 Salt stress response/antifungal
Pkinase PF00069 286 - 493 1.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 288 - 495 1.9e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 464
Acc36I ACCTGC 1 cut(s) 464
AccB1I GGYRCC 4 cut(s) 635, 706, 773, 827
AccI GTMKAC 1 cut(s) 1410
AccII CGCG 4 cut(s) 1128, 1130, 1227, 1376
AciI CCGC 2 cut(s) 882, 1446
AclWI GGATC 6 cut(s) 333, 369, 1109, 1497, 1541, 1738
AcsI RAATTY 5 cut(s) 491, 763, 974, 1018, 1275
AcuI CTGAAG 2 cut(s) 879, 1632
AfaI GTAC 4 cut(s) 82, 1373, 1692, 1806
AfiI CCNNNNNNNGG 4 cut(s) 358, 1198, 1744, 1749
AhlI ACTAGT 1 cut(s) 1331
AjuI GAANNNNNNNTTGG 2 cut(s) 1630, 1662
Alw21I GWGCWC 2 cut(s) 267, 551
Alw26I GTCTC 4 cut(s) 127, 597, 1688, 1798
Alw44I GTGCAC 1 cut(s) 547
AlwI GGATC 6 cut(s) 333, 369, 1109, 1497, 1541, 1738
AoxI GGCC 1 cut(s) 349
ApaLI GTGCAC 1 cut(s) 547
ApeKI GCWGC 6 cut(s) 240, 467, 470, 1183, 1461, 1820
ApoI RAATTY 5 cut(s) 491, 763, 974, 1018, 1275
ArsI GACNNNNNNTTYG 2 cut(s) 972, 1004
Asp700I GAANNNNTTC 3 cut(s) 443, 1062, 1531
AspLEI GCGC 4 cut(s) 739, 1128, 1130, 1132
AspS9I GGNCC 1 cut(s) 1347
AsuHPI GGTGA 2 cut(s) 735, 932
AvaII GGWCC 1 cut(s) 1347
BaeGI GKGCMC 1 cut(s) 551
BanI GGYRCC 4 cut(s) 635, 706, 773, 827
BanII GRGCYC 1 cut(s) 267
BarI GAAGNNNNNNTAC 2 cut(s) 990, 1022
Bbv12I GWGCWC 2 cut(s) 267, 551
BbvI GCAGC 6 cut(s) 227, 454, 482, 1170, 1448, 1807
BccI CCATC 5 cut(s) 626, 724, 754, 839, 1743
BceAI ACGGC 2 cut(s) 154, 219
BclI TGATCA 2 cut(s) 3, 1099
BcoDI GTCTC 4 cut(s) 127, 597, 1688, 1798
BcuI ACTAGT 1 cut(s) 1331
BfaI CTAG 6 cut(s) 539, 995, 1176, 1239, 1332, 1849
BfmI CTRYAG 3 cut(s) 468, 843, 1411
BfuAI ACCTGC 1 cut(s) 464
BglII AGATCT 2 cut(s) 28, 430
BisI GCNGC 6 cut(s) 241, 468, 471, 1184, 1462, 1821
BlpI GCTNAGC 2 cut(s) 21, 1002
BlsI GCNGC 6 cut(s) 242, 469, 472, 1185, 1463, 1822
Bme18I GGWCC 1 cut(s) 1347
BmgT120I GGNCC 1 cut(s) 1347
BmiI GGNNCC 6 cut(s) 637, 708, 775, 829, 1348, 1365
BmrI ACTGGG 2 cut(s) 538, 1682
BmsI GCATC 4 cut(s) 772, 1246, 1368, 1577
BmuI ACTGGG 2 cut(s) 538, 1682
BpmI CTGGAG 2 cut(s) 238, 1537
Bpu10I CCTNAGC 1 cut(s) 1211
Bpu1102I GCTNAGC 2 cut(s) 21, 1002
BpuEI CTTGAG 2 cut(s) 281, 1075
BsaJI CCNNGG 2 cut(s) 564, 1743
BsaXI ACNNNNNCTCC 2 cut(s) 204, 234
Bsc4I CCNNNNNNNGG 4 cut(s) 358, 1198, 1744, 1749
Bse1I ACTGG 2 cut(s) 544, 1688
Bse3DI GCAATG 1 cut(s) 1170
BseDI CCNNGG 2 cut(s) 564, 1743
BseGI GGATG 4 cut(s) 158, 606, 637, 1754
BseLI CCNNNNNNNGG 4 cut(s) 358, 1198, 1744, 1749
BseMI GCAATG 1 cut(s) 1170
BseMII CTCAG 5 cut(s) 35, 280, 1359, 1693, 1710
BseNI ACTGG 2 cut(s) 544, 1688
BsePI GCGCGC 2 cut(s) 1126, 1128
BseRI GAGGAG 2 cut(s) 103, 225
BseSI GKGCMC 1 cut(s) 551
BseXI GCAGC 6 cut(s) 227, 454, 482, 1170, 1448, 1807
BsgI GTGCAG 1 cut(s) 822
Bsh1236I CGCG 4 cut(s) 1128, 1130, 1227, 1376
BshFI GGCC 1 cut(s) 351
BshNI GGYRCC 4 cut(s) 635, 706, 773, 827
BsiHKAI GWGCWC 2 cut(s) 267, 551
BslFI GGGAC 2 cut(s) 213, 1360
BslI CCNNNNNNNGG 4 cut(s) 358, 1198, 1744, 1749
BsmAI GTCTC 4 cut(s) 127, 597, 1688, 1798
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 2 cut(s) 213, 1360
BsmI GAATGC 2 cut(s) 1590, 1823
BsnI GGCC 1 cut(s) 351
Bsp1286I GDGCHC 2 cut(s) 267, 551
Bsp1720I GCTNAGC 2 cut(s) 21, 1002
Bsp68I TCGCGA 1 cut(s) 1227
BspACI CCGC 2 cut(s) 882, 1446
BspANI GGCC 1 cut(s) 351
BspCNI CTCAG 5 cut(s) 34, 279, 1360, 1692, 1709
BspFNI CGCG 4 cut(s) 1128, 1130, 1227, 1376
BspHI TCATGA 2 cut(s) 1195, 1581
BspLI GGNNCC 6 cut(s) 637, 708, 775, 829, 1348, 1365
BspMAI CTGCAG 1 cut(s) 472
BspMI ACCTGC 1 cut(s) 464
BspPI GGATC 6 cut(s) 333, 369, 1109, 1497, 1541, 1738
BspQI GCTCTTC 1 cut(s) 1505
BspT107I GGYRCC 4 cut(s) 635, 706, 773, 827
BsrDI GCAATG 1 cut(s) 1170
BsrI ACTGG 2 cut(s) 544, 1688
BssECI CCNNGG 2 cut(s) 564, 1743
BssHII GCGCGC 2 cut(s) 1126, 1128
BssT1I CCWWGG 1 cut(s) 1743
Bst4CI ACNGT 2 cut(s) 620, 1415
Bst6I CTCTTC 2 cut(s) 918, 1505
BstAPI GCANNNNNTGC 1 cut(s) 582
BstC8I GCNNGC 5 cut(s) 551, 1046, 1128, 1130, 1613
BstDEI CTNAG 7 cut(s) 21, 266, 1002, 1211, 1368, 1679, 1696
BstENI CCTNNNNNAGG 2 cut(s) 356, 1196
BstF5I GGATG 4 cut(s) 158, 606, 637, 1754
BstFNI CGCG 4 cut(s) 1128, 1130, 1227, 1376
BstHHI GCGC 4 cut(s) 739, 1128, 1130, 1132
BstMAI GTCTC 4 cut(s) 127, 597, 1688, 1798
BstMWI GCNNNNNNNGC 5 cut(s) 240, 324, 582, 721, 782
BstNSI RCATGY 1 cut(s) 322
BstSFI CTRYAG 3 cut(s) 468, 843, 1411
BstSLI GKGCMC 1 cut(s) 551
BstUI CGCG 4 cut(s) 1128, 1130, 1227, 1376
BstV1I GCAGC 6 cut(s) 227, 454, 482, 1170, 1448, 1807
BstX2I RGATCY 5 cut(s) 28, 361, 430, 1489, 1546
BstYI RGATCY 5 cut(s) 28, 361, 430, 1489, 1546
BsuRI GGCC 1 cut(s) 351
BtgZI GCGATG 3 cut(s) 705, 1208, 1391
BtsCI GGATG 4 cut(s) 158, 606, 637, 1754
BtsI GCAGTG 2 cut(s) 710, 939
BtsIMutI CAGTG 4 cut(s) 551, 576, 710, 939
BtuMI TCGCGA 1 cut(s) 1227
BveI ACCTGC 1 cut(s) 464
Cac8I GCNNGC 5 cut(s) 551, 1046, 1128, 1130, 1613
CciI TCATGA 2 cut(s) 1195, 1581
CfoI GCGC 4 cut(s) 739, 1128, 1130, 1132
Cfr13I GGNCC 1 cut(s) 1347
CseI GACGC 2 cut(s) 1714, 1764
Csp6I GTAC 4 cut(s) 81, 1372, 1691, 1805
CviAII CATG 9 cut(s) 319, 355, 1196, 1291, 1382, 1483, 1506, 1582, 1660
CviQI GTAC 4 cut(s) 81, 1372, 1691, 1805
DdeI CTNAG 7 cut(s) 21, 266, 1002, 1211, 1368, 1679, 1696
Eam1104I CTCTTC 2 cut(s) 918, 1505
EarI CTCTTC 2 cut(s) 918, 1505
Ecl136II GAGCTC 1 cut(s) 265
Eco130I CCWWGG 1 cut(s) 1743
Eco24I GRGCYC 1 cut(s) 267
Eco47I GGWCC 1 cut(s) 1347
Eco53kI GAGCTC 1 cut(s) 265
Eco57I CTGAAG 2 cut(s) 879, 1632
EcoICRI GAGCTC 1 cut(s) 265
EcoNI CCTNNNNNAGG 2 cut(s) 356, 1196
EcoO109I RGGNCCY 1 cut(s) 1347
EcoRI GAATTC 1 cut(s) 974
EcoT14I CCWWGG 1 cut(s) 1743
EcoT22I ATGCAT 4 cut(s) 1383, 1507, 1592, 1719
EcoT38I GRGCYC 1 cut(s) 267
ErhI CCWWGG 1 cut(s) 1743
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 9 cut(s) 322, 358, 1199, 1294, 1385, 1486, 1509, 1585, 1663
FalI AAGNNNNNCTT 4 cut(s) 282, 314, 1772, 1804
FaqI GGGAC 2 cut(s) 213, 1360
FatI CATG 9 cut(s) 318, 354, 1195, 1290, 1381, 1482, 1505, 1581, 1659
FbaI TGATCA 2 cut(s) 3, 1099
FblI GTMKAC 1 cut(s) 1410
Fnu4HI GCNGC 6 cut(s) 241, 468, 471, 1184, 1462, 1821
FokI GGATG 4 cut(s) 145, 593, 644, 1761
FriOI GRGCYC 1 cut(s) 267
Fsp4HI GCNGC 6 cut(s) 241, 468, 471, 1184, 1462, 1821
FspBI CTAG 6 cut(s) 539, 995, 1176, 1239, 1332, 1849
GlaI GCGC 4 cut(s) 738, 1127, 1129, 1131
GluI GCNGC 6 cut(s) 241, 468, 471, 1184, 1462, 1821
GsuI CTGGAG 2 cut(s) 238, 1537
HaeIII GGCC 1 cut(s) 351
HgaI GACGC 2 cut(s) 1714, 1764
HhaI GCGC 4 cut(s) 739, 1128, 1130, 1132
Hin1II CATG 9 cut(s) 322, 358, 1199, 1294, 1385, 1486, 1509, 1585, 1663
Hin6I GCGC 4 cut(s) 737, 1126, 1128, 1130
HinP1I GCGC 4 cut(s) 737, 1126, 1128, 1130
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 6 cut(s) 385, 439, 806, 953, 968, 1202
HphI GGTGA 2 cut(s) 735, 932
Hpy166II GTNNAC 5 cut(s) 482, 549, 898, 908, 1411
Hpy188III TCNNGA 9 cut(s) 382, 523, 957, 1097, 1196, 1226, 1367, 1582, 1764
Hpy8I GTNNAC 5 cut(s) 482, 549, 898, 908, 1411
Hpy99I CGWCG 1 cut(s) 1730
HpyAV CCTTC 8 cut(s) 116, 622, 694, 750, 764, 1160, 1202, 1517
HpyCH4III ACNGT 2 cut(s) 620, 1415
HpyCH4IV ACGT 1 cut(s) 512
HpyF10VI GCNNNNNNNGC 5 cut(s) 240, 324, 582, 721, 782
HpyF3I CTNAG 7 cut(s) 21, 266, 1002, 1211, 1368, 1679, 1696
HpySE526I ACGT 1 cut(s) 512
Hsp92II CATG 9 cut(s) 322, 358, 1199, 1294, 1385, 1486, 1509, 1585, 1663
HspAI GCGC 4 cut(s) 737, 1126, 1128, 1130
Ksp22I TGATCA 2 cut(s) 3, 1099
LguI GCTCTTC 1 cut(s) 1505
LmnI GCTCC 1 cut(s) 1369
Lsp1109I GCAGC 6 cut(s) 227, 454, 482, 1170, 1448, 1807
LweI GCATC 4 cut(s) 772, 1246, 1368, 1577
MaeI CTAG 6 cut(s) 539, 995, 1176, 1239, 1332, 1849
MaeII ACGT 1 cut(s) 512
MaeIII GTNAC 6 cut(s) 62, 321, 659, 1151, 1241, 1768
MboII GAAGA 6 cut(s) 440, 462, 791, 935, 1484, 1522
MfeI CAATTG 1 cut(s) 1133
MflI RGATCY 5 cut(s) 28, 361, 430, 1489, 1546
MhlI GDGCHC 2 cut(s) 267, 551
MlyI GAGTC 1 cut(s) 394
MmeI TCCRAC 2 cut(s) 1574, 1708
Mph1103I ATGCAT 4 cut(s) 1383, 1507, 1592, 1719
MroXI GAANNNNTTC 3 cut(s) 443, 1062, 1531
MseI TTAA 4 cut(s) 176, 246, 648, 1250
MslI CAYNNNNRTG 1 cut(s) 317
MunI CAATTG 1 cut(s) 1133
Mva1269I GAATGC 2 cut(s) 1590, 1823
MvnI CGCG 4 cut(s) 1128, 1130, 1227, 1376
MwoI GCNNNNNNNGC 5 cut(s) 240, 324, 582, 721, 782
NlaIII CATG 9 cut(s) 322, 358, 1199, 1294, 1385, 1486, 1509, 1585, 1663
NlaIV GGNNCC 6 cut(s) 637, 708, 775, 829, 1348, 1365
NmeAIII GCCGAG 1 cut(s) 1186
NruI TCGCGA 1 cut(s) 1227
NsiI ATGCAT 4 cut(s) 1383, 1507, 1592, 1719
NspI RCATGY 1 cut(s) 322
PagI TCATGA 2 cut(s) 1195, 1581
PaqCI CACCTGC 1 cut(s) 464
PauI GCGCGC 2 cut(s) 1126, 1128
PciSI GCTCTTC 1 cut(s) 1505
PctI GAATGC 2 cut(s) 1590, 1823
PdmI GAANNNNTTC 3 cut(s) 443, 1062, 1531
PfeI GAWTC 5 cut(s) 439, 806, 953, 968, 1202
PkrI GCNGC 6 cut(s) 242, 469, 472, 1185, 1463, 1822
PleI GAGTC 1 cut(s) 393
PpsI GAGTC 1 cut(s) 393
PpuMI RGGWCCY 1 cut(s) 1347
Psp124BI GAGCTC 1 cut(s) 267
Psp5II RGGWCCY 1 cut(s) 1347
PspN4I GGNNCC 6 cut(s) 637, 708, 775, 829, 1348, 1365
PspPI GGNCC 1 cut(s) 1347
PspPPI RGGWCCY 1 cut(s) 1347
PstI CTGCAG 1 cut(s) 472
PsuI RGATCY 5 cut(s) 28, 361, 430, 1489, 1546
PteI GCGCGC 2 cut(s) 1126, 1128
RruI TCGCGA 1 cut(s) 1227
RsaI GTAC 4 cut(s) 82, 1373, 1692, 1806
RsaNI GTAC 4 cut(s) 81, 1372, 1691, 1805
RseI CAYNNNNRTG 1 cut(s) 317
SacI GAGCTC 1 cut(s) 267
SapI GCTCTTC 1 cut(s) 1505
SaqAI TTAA 4 cut(s) 176, 246, 648, 1250
SatI GCNGC 6 cut(s) 241, 468, 471, 1184, 1462, 1821
Sau96I GGNCC 1 cut(s) 1347
SchI GAGTC 1 cut(s) 394
SduI GDGCHC 2 cut(s) 267, 551
SfaNI GCATC 4 cut(s) 772, 1246, 1368, 1577
SfcI CTRYAG 3 cut(s) 468, 843, 1411
SinI GGWCC 1 cut(s) 1347
SmiMI CAYNNNNRTG 1 cut(s) 317
SmlI CTYRAG 2 cut(s) 260, 1090
SmoI CTYRAG 2 cut(s) 260, 1090
SpeI ACTAGT 1 cut(s) 1331
SsiI CCGC 2 cut(s) 882, 1446
SspMI CTAG 6 cut(s) 539, 995, 1176, 1239, 1332, 1849
SstI GAGCTC 1 cut(s) 267
StyI CCWWGG 1 cut(s) 1743
TaaI ACNGT 2 cut(s) 620, 1415
TaiI ACGT 1 cut(s) 515
TaqI TCGA 1 cut(s) 819
TaqII GACCGA 1 cut(s) 1786
TatI WGTACW 1 cut(s) 80
TfiI GAWTC 5 cut(s) 439, 806, 953, 968, 1202
Tru1I TTAA 4 cut(s) 176, 246, 648, 1250
Tru9I TTAA 4 cut(s) 176, 246, 648, 1250
TscAI CASTG 4 cut(s) 551, 583, 717, 939
TseI GCWGC 6 cut(s) 240, 467, 470, 1183, 1461, 1820
TspDTI ATGAA 7 cut(s) 69, 147, 804, 1184, 1211, 1329, 1816
TspGWI ACGGA 2 cut(s) 1384, 1457
TspRI CASTG 4 cut(s) 551, 583, 717, 939
VneI GTGCAC 1 cut(s) 547
VpaK11BI GGWCC 1 cut(s) 1347
XagI CCTNNNNNAGG 2 cut(s) 356, 1196
XapI RAATTY 5 cut(s) 491, 763, 974, 1018, 1275
XceI RCATGY 1 cut(s) 322
XcmI CCANNNNNNNNNTGG 1 cut(s) 1503
XmiI GTMKAC 1 cut(s) 1410
XmnI GAANNNNTTC 3 cut(s) 443, 1062, 1531
XspI CTAG 6 cut(s) 539, 995, 1176, 1239, 1332, 1849
Zsp2I ATGCAT 4 cut(s) 1383, 1507, 1592, 1719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.