RchiOBHm_Chr5g0033431

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
27259855 .. 27261011
1157 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31252

Sequence Viewer

Length: 573 bp
ATGAGTTTCGTGAATTCATTACAATATGAATTTGAAATTATAAGATCTGCAACAGATGACTTTTCTGATGCCAATAAGCTTGGTCAAGGTGGATTTGGAGATGTTTACAAGTGTGATGCAGGTAGGCTATTAAATGGACAATATATTGCTGTGAAAATGCTCTCCAAGAGTTCTAAACAGGGTGATCGTGAATTTAAAAATGAAGTCAGGTTACTTGCTCCGCTTCAACACAGGAACTTGGTAAAATTAGTAGGCTTTTGCATAAAAGGAGGGGAAAGGCTCCTCATTTATGAATATGTACCTAATACAAGCCTTAATCACTACATTTTTGATCATATCAATCATGAACATTTGGATTGGGAAACACGTTACAATATCATAGGAGGAATTGTTCGTGGTCTTCTTTATCTTCATGAAGATTCTCGAATACGAGTTATTCACTGCGATCTCAAACTCAGCAACATTTTGCTAGGTGAAGATATGAACCCTAAAATTGCAGATTTTGGTACTGCAAGATTGTTTGTCAAGGGTCAAACTCAAGGAGATGCAAAGACTATTGTTGGGACCGAGTAA

Protein Analysis

190

Amino Acids

21.56

Weight (kDa)

6.66

Isoelectric Point (pI)

32.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 22 - 189 8.6e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 25 - 178 1.9e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 41
Acc36I ACCTGC 1 cut(s) 110
AciI CCGC 1 cut(s) 221
AcsI RAATTY 3 cut(s) 13, 29, 191
AfaI GTAC 2 cut(s) 300, 508
AflIII ACRYGT 1 cut(s) 365
AgsI TTSAA 2 cut(s) 35, 227
AloI GAACNNNNNNTCC 2 cut(s) 375, 407
AluBI AGCT 1 cut(s) 79
AluI AGCT 1 cut(s) 79
ApoI RAATTY 3 cut(s) 13, 29, 191
AspS9I GGNCC 1 cut(s) 564
AsuHPI GGTGA 2 cut(s) 194, 485
AvaII GGWCC 1 cut(s) 564
BarI GAAGNNNNNNTAC 2 cut(s) 195, 227
BbsI GAAGAC 1 cut(s) 392
BclI TGATCA 1 cut(s) 331
BfaI CTAG 1 cut(s) 470
BfuAI ACCTGC 1 cut(s) 110
BglII AGATCT 1 cut(s) 44
Bme18I GGWCC 1 cut(s) 564
BmgT120I GGNCC 1 cut(s) 564
BmiI GGNNCC 2 cut(s) 281, 565
BmsI GCATC 3 cut(s) 58, 106, 535
BpiI GAAGAC 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 522
BsaXI ACNNNNNCTCC 2 cut(s) 375, 405
BseMII CTCAG 1 cut(s) 469
BseRI GAGGAG 1 cut(s) 272
Bsp143I GATC 4 cut(s) 44, 184, 331, 445
BspACI CCGC 1 cut(s) 221
BspCNI CTCAG 1 cut(s) 468
BspHI TCATGA 2 cut(s) 343, 412
BspLI GGNNCC 2 cut(s) 281, 565
BspMI ACCTGC 1 cut(s) 110
BssMI GATC 4 cut(s) 44, 184, 331, 445
BstDEI CTNAG 1 cut(s) 455
BstKTI GATC 4 cut(s) 47, 187, 334, 448
BstMBI GATC 4 cut(s) 44, 184, 331, 445
BstV2I GAAGAC 1 cut(s) 392
BstX2I RGATCY 1 cut(s) 44
BstYI RGATCY 1 cut(s) 44
BtsI GCAGTG 1 cut(s) 439
BtsIMutI CAGTG 1 cut(s) 439
BveI ACCTGC 1 cut(s) 110
CciI TCATGA 2 cut(s) 343, 412
Cfr13I GGNCC 1 cut(s) 564
Csp6I GTAC 2 cut(s) 299, 507
CviAII CATG 2 cut(s) 344, 413
CviJI RGCY 5 cut(s) 79, 127, 255, 280, 312
CviKI_1 RGCY 5 cut(s) 79, 127, 255, 280, 312
CviQI GTAC 2 cut(s) 299, 507
DdeI CTNAG 1 cut(s) 455
DpnI GATC 4 cut(s) 46, 186, 333, 447
DpnII GATC 4 cut(s) 44, 184, 331, 445
DraI TTTAAA 1 cut(s) 196
Eco47I GGWCC 1 cut(s) 564
EcoRI GAATTC 1 cut(s) 13
FaeI CATG 2 cut(s) 347, 416
FatI CATG 2 cut(s) 343, 412
FbaI TGATCA 1 cut(s) 331
FspBI CTAG 1 cut(s) 470
Hin1II CATG 2 cut(s) 347, 416
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 1 cut(s) 419
HphI GGTGA 2 cut(s) 194, 485
Hpy166II GTNNAC 1 cut(s) 106
Hpy188I TCNGA 1 cut(s) 67
Hpy188III TCNNGA 5 cut(s) 10, 188, 344, 413, 423
Hpy8I GTNNAC 1 cut(s) 106
HpyCH4IV ACGT 1 cut(s) 367
HpyCH4V TGCA 6 cut(s) 50, 119, 261, 497, 512, 548
HpyF3I CTNAG 1 cut(s) 455
HpySE526I ACGT 1 cut(s) 367
Hsp92II CATG 2 cut(s) 347, 416
Ksp22I TGATCA 1 cut(s) 331
Kzo9I GATC 4 cut(s) 44, 184, 331, 445
LmnI GCTCC 2 cut(s) 223, 285
LpnPI CCDG 4 cut(s) 105, 164, 193, 217
LweI GCATC 3 cut(s) 58, 106, 535
MaeI CTAG 1 cut(s) 470
MaeII ACGT 1 cut(s) 367
MaeIII GTNAC 2 cut(s) 210, 368
MalI GATC 4 cut(s) 46, 186, 333, 447
MboI GATC 4 cut(s) 44, 184, 331, 445
MboII GAAGA 4 cut(s) 392, 401, 428, 488
MflI RGATCY 1 cut(s) 44
MluCI AATT 7 cut(s) 13, 29, 36, 191, 245, 387, 492
MnlI CCTC 3 cut(s) 263, 293, 377
MseI TTAA 3 cut(s) 131, 195, 315
NdeII GATC 4 cut(s) 44, 184, 331, 445
NlaIII CATG 2 cut(s) 347, 416
NlaIV GGNNCC 2 cut(s) 281, 565
PagI TCATGA 2 cut(s) 343, 412
PfeI GAWTC 1 cut(s) 419
PsiI TTATAA 1 cut(s) 41
PspN4I GGNNCC 2 cut(s) 281, 565
PspPI GGNCC 1 cut(s) 564
PsuI RGATCY 1 cut(s) 44
RsaI GTAC 2 cut(s) 300, 508
RsaNI GTAC 2 cut(s) 299, 507
SaqAI TTAA 3 cut(s) 131, 195, 315
Sau3AI GATC 4 cut(s) 44, 184, 331, 445
Sau96I GGNCC 1 cut(s) 564
SetI ASST 7 cut(s) 81, 91, 124, 212, 304, 370, 475
SfaNI GCATC 3 cut(s) 58, 106, 535
SinI GGWCC 1 cut(s) 564
SmlI CTYRAG 1 cut(s) 537
SmoI CTYRAG 1 cut(s) 537
Sse9I AATT 7 cut(s) 13, 29, 36, 191, 245, 387, 492
SsiI CCGC 1 cut(s) 221
SspMI CTAG 1 cut(s) 470
TaiI ACGT 1 cut(s) 370
TaqI TCGA 1 cut(s) 424
TasI AATT 7 cut(s) 13, 29, 36, 191, 245, 387, 492
TfiI GAWTC 1 cut(s) 419
Tru1I TTAA 3 cut(s) 131, 195, 315
Tru9I TTAA 3 cut(s) 131, 195, 315
TscAI CASTG 1 cut(s) 446
TspDTI ATGAA 8 cut(s) 6, 42, 216, 306, 360, 401, 429, 497
TspRI CASTG 1 cut(s) 446
VpaK11BI GGWCC 1 cut(s) 564
XapI RAATTY 3 cut(s) 13, 29, 191
XspI CTAG 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.