RLG00000031222

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
3144896 .. 3147740
2845 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031222

Sequence Viewer

Length: 1575 bp
ATGGCTTCTACCATTCCTCCTACGGCGAAAACGCTAATCGAGTTTATGCAATCGGACACTGCAGAGGAGACATCGCCACCGATGATTGCCGTAGTTGCTTTAACGACTCTAGAGTTGGTCTCAGACAGCTTTGTCCCAACCAGAAGGAAGGGTTGGTACGACAATTGCATGTTACGGTACTCAAACCGATCCATCTATGGCCTCCTGGAAATTACGCCTAGTTTCCGTCTGATTAATACAGAGGACGTATCATCATCTCTCGTGGAATCTTTCTTTCAACAGCTTGAAAAGTTATTGGAAAGCCTGAGGAGTCAAGCTGCTTCGGCCGGTCCTCTTCGTAAGTTTGCTATCGGAAACACGAGTTACACGACCAACAGCTCAGCTTTCCAAAATATATTTGCACTTACTCAGTGCACGCCAGATTTGTCGGAGAAAGAGTGCAGTGATTGCTTGGAGGGTGCTTTCGGACAATACACGGCATGTTGCTATGGAAAGATAGGTGGGAGAATTATTAGACCCAGCTGTAATTTTGGGTATGAGATTATCCATCAAATGTGGTACCACTGCCATCACCACCATCACCAGCACCATCACCAACATCTCCCCAACCATCAATCAATACTACCCCGGGAGGGTCACCTTCTCAATGGAGAAGTTATAGCAGTGAAAAGACTTTCTATTAATTCTGGGCAAGGAATTTCAGAATTTAAAAATGAGGTCTTGTTAGTGGCCAAGCTTCAACGTCGAAATTTAGTTAGGCTTCTAGGTTTCTGTTTTGAAGGAAATGAAAAGCTTCTCGTTTATGAATTTGTCCCTAATACAAGTCTCGATCATATTATATTTGACCCAATTAAGCGCACACAATTGGATTGGGATAGACGCTACAAAATCATAGTGGGAATTGCTCGAGGGCTCCTTTACCGTCATGAAGATTCTCGACTTCGAATTATTCATCGTGATCTCAAAGTTAGTAATATCTTGTTAGATGCAGAACTAAATCCTAAAATTGCAGATTTTGGCATGGCTAGATTATTCGTACCTGATCAAACTCAAGGCAATACGAGTCGAATTGTCGGGACCTACGGATATATGGCTCCAGAATATGCAATGCATGGACAATTCTCTGTCAAGTCTGATGTCTATAGTTTCGGCGTGTTAGTTTTAGAGATAATAAGTGGACAAAAGAATAGTTGTTTTCGCCTTGGAGAGAATGTAGAGGATCTTCTCAGCTATGCATGGAAAAGTTGGAAGGAAGGGACAGCTCCAAGTCTAATAGATCCCACATTGAGGAATGGCTGGAGATCTGAAATAATGAGATGCATTCACATTGGATTATTATGTGTACAGGAAAATATAGATGATAGGCCAACCATGACTTCAATTAGTGTCATGCTGAATAGCTACTCTCTTGCTCTCGCATTACCCTCACCACCCAACTTTTTTATGACCGACAGGACAGATCCACTGGCAATGGACTATTCTTCAACGGTGATTGAGTCCGATCAATCAAAAAGCAGTAGCTCCTTGATCGCTGCATCAGTCAATGACGATTCAACTGAAATATTTCCTCGCTAG

Protein Analysis

525

Amino Acids

59.18

Weight (kDa)

6.23

Isoelectric Point (pI)

48.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 88 - 180 3.1e-11 Salt stress response/antifungal
Pkinase PF00069 216 - 398 1.7e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 218 - 462 2e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
Acc65I GGTACC 1 cut(s) 558
AccB1I GGYRCC 1 cut(s) 558
AclWI GGATC 4 cut(s) 183, 1227, 1271, 1454
AcoI YGGCCR 2 cut(s) 324, 729
AcsI RAATTY 4 cut(s) 696, 704, 748, 806
AfaI GTAC 5 cut(s) 158, 179, 560, 1038, 1344
AfiI CCNNNNNNNGG 2 cut(s) 632, 1287
AgsI TTSAA 7 cut(s) 278, 287, 740, 779, 1380, 1485, 1554
AjnI CCWGG 1 cut(s) 204
AjuI GAANNNNNNNTTGG 4 cut(s) 136, 168, 1360, 1392
Alw21I GWGCWC 1 cut(s) 416
Alw26I GTCTC 3 cut(s) 62, 124, 830
Alw44I GTGCAC 1 cut(s) 412
AlwI GGATC 4 cut(s) 183, 1227, 1271, 1454
Ama87I CYCGRG 2 cut(s) 627, 906
AoxI GGCC 4 cut(s) 199, 324, 729, 1364
ApaLI GTGCAC 1 cut(s) 412
ApeKI GCWGC 2 cut(s) 317, 1532
ApoI RAATTY 4 cut(s) 696, 704, 748, 806
AseI ATTAAT 2 cut(s) 234, 681
Asp700I GAANNNNTTC 2 cut(s) 792, 1563
Asp718I GGTACC 1 cut(s) 558
AspLEI GCGC 1 cut(s) 858
AspS9I GGNCC 2 cut(s) 329, 1077
AsuC2I CCSGG 2 cut(s) 628, 629
AsuHPI GGTGA 6 cut(s) 563, 572, 584, 629, 1419, 1501
AsuII TTCGAA 1 cut(s) 943
AvaI CYCGRG 2 cut(s) 627, 906
AvaII GGWCC 2 cut(s) 329, 1077
AxyI CCTNAGG 1 cut(s) 305
BaeGI GKGCMC 1 cut(s) 416
BalI TGGCCA 1 cut(s) 731
BanI GGYRCC 1 cut(s) 558
BanII GRGCYC 1 cut(s) 915
BarI GAAGNNNNNNTAC 4 cut(s) 140, 172, 1206, 1238
BauI CACGAG 2 cut(s) 260, 358
Bbv12I GWGCWC 1 cut(s) 416
BbvI GCAGC 2 cut(s) 304, 1519
BccI CCATC 6 cut(s) 200, 555, 576, 585, 597, 618
BceAI ACGGC 3 cut(s) 39, 74, 492
BciT130I CCWGG 1 cut(s) 206
BclI TGATCA 1 cut(s) 1042
BcnI CCSGG 2 cut(s) 628, 629
BcoDI GTCTC 3 cut(s) 62, 124, 830
BfaI CTAG 5 cut(s) 110, 219, 764, 1026, 1573
BfmI CTRYAG 2 cut(s) 60, 1141
BglII AGATCT 1 cut(s) 1301
BisI GCNGC 2 cut(s) 318, 1533
BlpI GCTNAGC 1 cut(s) 379
BlsI GCNGC 2 cut(s) 319, 1534
Bme1390I CCNGG 3 cut(s) 206, 628, 629
Bme18I GGWCC 2 cut(s) 329, 1077
BmeT110I CYCGRG 2 cut(s) 627, 906
BmgT120I GGNCC 2 cut(s) 329, 1077
BmiI GGNNCC 4 cut(s) 560, 914, 1078, 1095
BmrFI CCNGG 3 cut(s) 206, 628, 629
BmsI GCATC 3 cut(s) 976, 1307, 1544
BplI GAGNNNNNCTC 2 cut(s) 104, 136
BpmI CTGGAG 2 cut(s) 1080, 1318
Bpu1102I GCTNAGC 1 cut(s) 379
Bpu14I TTCGAA 1 cut(s) 943
BpuEI CTTGAG 1 cut(s) 1035
BpuMI CCSGG 2 cut(s) 628, 629
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 3 cut(s) 626, 627, 1201
BsaXI ACNNNNNCTCC 5 cut(s) 31, 422, 452, 1197, 1227
Bsc4I CCNNNNNNNGG 2 cut(s) 632, 1287
Bse118I RCCGGY 1 cut(s) 326
Bse1I ACTGG 1 cut(s) 1470
Bse21I CCTNAGG 1 cut(s) 305
Bse3DI GCAATG 2 cut(s) 1113, 1476
BseBI CCWGG 1 cut(s) 206
BseDI CCNNGG 3 cut(s) 626, 627, 1201
BseLI CCNNNNNNNGG 2 cut(s) 632, 1287
BseMI GCAATG 2 cut(s) 1113, 1476
BseMII CTCAG 5 cut(s) 135, 296, 393, 422, 1240
BseNI ACTGG 1 cut(s) 1470
BseRI GAGGAG 2 cut(s) 80, 322
BseSI GKGCMC 1 cut(s) 416
BseX3I CGGCCG 1 cut(s) 324
BseXI GCAGC 2 cut(s) 304, 1519
BseYI CCCAGC 1 cut(s) 518
BsgI GTGCAG 1 cut(s) 460
Bsh1285I CGRYCG 1 cut(s) 327
BshFI GGCC 4 cut(s) 201, 326, 731, 1366
BshNI GGYRCC 1 cut(s) 558
BsiEI CGRYCG 1 cut(s) 327
BsiHKAI GWGCWC 1 cut(s) 416
BsiHKCI CYCGRG 2 cut(s) 627, 906
BsiSI CCGG 2 cut(s) 327, 628
BslFI GGGAC 4 cut(s) 119, 797, 1090, 1270
BslI CCNNNNNNNGG 2 cut(s) 632, 1287
BsmAI GTCTC 3 cut(s) 62, 124, 830
BsmFI GGGAC 4 cut(s) 119, 797, 1090, 1270
BsmI GAATGC 1 cut(s) 1320
BsnI GGCC 4 cut(s) 201, 326, 731, 1366
Bso31I GGTCTC 1 cut(s) 124
BsoBI CYCGRG 2 cut(s) 627, 906
Bsp119I TTCGAA 1 cut(s) 943
Bsp1286I GDGCHC 2 cut(s) 416, 915
Bsp1407I TGTACA 1 cut(s) 1342
Bsp1720I GCTNAGC 1 cut(s) 379
BspANI GGCC 4 cut(s) 201, 326, 731, 1366
BspCNI CTCAG 5 cut(s) 134, 297, 392, 421, 1239
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 4 cut(s) 560, 914, 1078, 1095
BspMAI CTGCAG 1 cut(s) 64
BspPI GGATC 4 cut(s) 183, 1227, 1271, 1454
BspT104I TTCGAA 1 cut(s) 943
BspT107I GGYRCC 1 cut(s) 558
BspTNI GGTCTC 1 cut(s) 124
BsrDI GCAATG 2 cut(s) 1113, 1476
BsrFI RCCGGY 1 cut(s) 326
BsrGI TGTACA 1 cut(s) 1342
BsrI ACTGG 1 cut(s) 1470
BssAI RCCGGY 1 cut(s) 326
BssECI CCNNGG 3 cut(s) 626, 627, 1201
BssSI CACGAG 2 cut(s) 260, 358
BssT1I CCWWGG 1 cut(s) 1201
Bst2BI CACGAG 2 cut(s) 260, 358
Bst2UI CCWGG 1 cut(s) 206
Bst4CI ACNGT 3 cut(s) 177, 923, 1489
Bst6I CTCTTC 1 cut(s) 339
BstAPI GCANNNNNTGC 1 cut(s) 447
BstAUI TGTACA 1 cut(s) 1342
BstBI TTCGAA 1 cut(s) 943
BstC8I GCNNGC 1 cut(s) 416
BstDEI CTNAG 5 cut(s) 121, 305, 379, 408, 1226
BstEII GGTNACC 1 cut(s) 635
BstHHI GCGC 1 cut(s) 858
BstMAI GTCTC 3 cut(s) 62, 124, 830
BstMCI CGRYCG 1 cut(s) 327
BstMWI GCNNNNNNNGC 3 cut(s) 95, 323, 447
BstNI CCWGG 1 cut(s) 206
BstNSI RCATGY 2 cut(s) 172, 483
BstPI GGTNACC 1 cut(s) 635
BstSCI CCNGG 3 cut(s) 204, 626, 627
BstSFI CTRYAG 2 cut(s) 60, 1141
BstSLI GKGCMC 1 cut(s) 416
BstV1I GCAGC 2 cut(s) 304, 1519
BstX2I RGATCY 4 cut(s) 1219, 1276, 1301, 1459
BstYI RGATCY 4 cut(s) 1219, 1276, 1301, 1459
BstZI CGGCCG 1 cut(s) 324
Bsu36I CCTNAGG 1 cut(s) 305
BsuRI GGCC 4 cut(s) 201, 326, 731, 1366
BtgZI GCGATG 1 cut(s) 57
BtsI GCAGTG 4 cut(s) 57, 448, 562, 669
BtsIMutI CAGTG 6 cut(s) 57, 416, 448, 562, 669, 1463
Cac8I GCNNGC 1 cut(s) 416
CciI TCATGA 1 cut(s) 925
CfoI GCGC 1 cut(s) 858
Cfr10I RCCGGY 1 cut(s) 326
Cfr13I GGNCC 2 cut(s) 329, 1077
Cfr9I CCCGGG 1 cut(s) 627
CseI GACGC 1 cut(s) 888
Csp6I GTAC 5 cut(s) 157, 178, 559, 1037, 1343
CviAII CATG 8 cut(s) 169, 480, 926, 1021, 1112, 1236, 1372, 1390
CviQI GTAC 5 cut(s) 157, 178, 559, 1037, 1343
DdeI CTNAG 5 cut(s) 121, 305, 379, 408, 1226
DraI TTTAAA 1 cut(s) 709
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 2 cut(s) 324, 729
EagI CGGCCG 1 cut(s) 324
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
EclXI CGGCCG 1 cut(s) 324
Eco130I CCWWGG 1 cut(s) 1201
Eco24I GRGCYC 1 cut(s) 915
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 2 cut(s) 329, 1077
Eco52I CGGCCG 1 cut(s) 324
Eco81I CCTNAGG 1 cut(s) 305
Eco88I CYCGRG 2 cut(s) 627, 906
Eco91I GGTNACC 1 cut(s) 635
EcoO109I RGGNCCY 1 cut(s) 1077
EcoO65I GGTNACC 1 cut(s) 635
EcoRII CCWGG 1 cut(s) 204
EcoT14I CCWWGG 1 cut(s) 1201
EcoT22I ATGCAT 3 cut(s) 1113, 1237, 1322
EcoT38I GRGCYC 1 cut(s) 915
ErhI CCWWGG 1 cut(s) 1201
FaeI CATG 8 cut(s) 172, 483, 929, 1024, 1115, 1239, 1375, 1393
FaqI GGGAC 4 cut(s) 119, 797, 1090, 1270
FatI CATG 8 cut(s) 168, 479, 925, 1020, 1111, 1235, 1371, 1389
FbaI TGATCA 1 cut(s) 1042
Fnu4HI GCNGC 2 cut(s) 318, 1533
FriOI GRGCYC 1 cut(s) 915
Fsp4HI GCNGC 2 cut(s) 318, 1533
FspBI CTAG 5 cut(s) 110, 219, 764, 1026, 1573
GlaI GCGC 1 cut(s) 857
GluI GCNGC 2 cut(s) 318, 1533
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 2 cut(s) 1080, 1318
HaeIII GGCC 4 cut(s) 201, 326, 731, 1366
HapII CCGG 2 cut(s) 327, 628
HgaI GACGC 1 cut(s) 888
HhaI GCGC 1 cut(s) 858
Hin1II CATG 8 cut(s) 172, 483, 929, 1024, 1115, 1239, 1375, 1393
Hin6I GCGC 1 cut(s) 856
HinP1I GCGC 1 cut(s) 856
HindIII AAGCTT 2 cut(s) 734, 791
HinfI GANTC 7 cut(s) 106, 266, 310, 932, 1063, 1496, 1550
HpaII CCGG 2 cut(s) 327, 628
HphI GGTGA 6 cut(s) 563, 572, 584, 629, 1419, 1501
Hpy166II GTNNAC 3 cut(s) 414, 1178, 1343
Hpy188III TCNNGA 7 cut(s) 110, 827, 926, 936, 956, 1075, 1097
Hpy8I GTNNAC 3 cut(s) 414, 1178, 1343
Hpy99I CGWCG 1 cut(s) 747
HpyAV CCTTC 6 cut(s) 138, 142, 650, 773, 1243, 1247
HpyCH4III ACNGT 3 cut(s) 177, 923, 1489
HpyCH4IV ACGT 2 cut(s) 246, 742
HpyF10VI GCNNNNNNNGC 3 cut(s) 95, 323, 447
HpyF3I CTNAG 5 cut(s) 121, 305, 379, 408, 1226
HpySE526I ACGT 2 cut(s) 246, 742
Hsp92II CATG 8 cut(s) 172, 483, 929, 1024, 1115, 1239, 1375, 1393
HspAI GCGC 1 cut(s) 856
KpnI GGTACC 1 cut(s) 562
Ksp22I TGATCA 1 cut(s) 1042
LmnI GCTCC 4 cut(s) 918, 1099, 1267, 1526
Lsp1109I GCAGC 2 cut(s) 304, 1519
LweI GCATC 3 cut(s) 976, 1307, 1544
MaeI CTAG 5 cut(s) 110, 219, 764, 1026, 1573
MaeII ACGT 2 cut(s) 246, 742
MaeIII GTNAC 3 cut(s) 171, 362, 635
MboII GAAGA 4 cut(s) 326, 941, 1214, 1473
MfeI CAATTG 2 cut(s) 163, 863
MflI RGATCY 4 cut(s) 1219, 1276, 1301, 1459
MhlI GDGCHC 2 cut(s) 416, 915
MlsI TGGCCA 1 cut(s) 731
MluNI TGGCCA 1 cut(s) 731
MlyI GAGTC 4 cut(s) 100, 319, 1072, 1505
MmeI TCCRAC 2 cut(s) 408, 1226
Mox20I TGGCCA 1 cut(s) 731
Mph1103I ATGCAT 3 cut(s) 1113, 1237, 1322
MroXI GAANNNNTTC 2 cut(s) 792, 1563
MscI TGGCCA 1 cut(s) 731
MseI TTAA 5 cut(s) 101, 234, 681, 708, 852
Msp20I TGGCCA 1 cut(s) 731
MspA1I CMGCKG 1 cut(s) 522
MspI CCGG 2 cut(s) 327, 628
MspR9I CCNGG 3 cut(s) 206, 628, 629
MunI CAATTG 2 cut(s) 163, 863
Mva1269I GAATGC 1 cut(s) 1320
MvaI CCWGG 1 cut(s) 206
MwoI GCNNNNNNNGC 3 cut(s) 95, 323, 447
NciI CCSGG 2 cut(s) 628, 629
NlaIII CATG 8 cut(s) 172, 483, 929, 1024, 1115, 1239, 1375, 1393
NlaIV GGNNCC 4 cut(s) 560, 914, 1078, 1095
NmuCI GTSAC 1 cut(s) 635
NsiI ATGCAT 3 cut(s) 1113, 1237, 1322
NspI RCATGY 2 cut(s) 172, 483
NspV TTCGAA 1 cut(s) 943
PaeR7I CTCGAG 1 cut(s) 906
PagI TCATGA 1 cut(s) 925
PcsI WCGNNNNNNNCGW 1 cut(s) 365
PctI GAATGC 1 cut(s) 1320
PdmI GAANNNNTTC 2 cut(s) 792, 1563
PfeI GAWTC 3 cut(s) 266, 932, 1550
PfoI TCCNGGA 1 cut(s) 204
PkrI GCNGC 2 cut(s) 319, 1534
PleI GAGTC 4 cut(s) 100, 318, 1071, 1504
PpsI GAGTC 4 cut(s) 100, 318, 1071, 1504
PpuMI RGGWCCY 1 cut(s) 1077
PshBI ATTAAT 2 cut(s) 234, 681
Psp5II RGGWCCY 1 cut(s) 1077
Psp6I CCWGG 1 cut(s) 204
PspEI GGTNACC 1 cut(s) 635
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 1 cut(s) 204
PspN4I GGNNCC 4 cut(s) 560, 914, 1078, 1095
PspPI GGNCC 2 cut(s) 329, 1077
PspPPI RGGWCCY 1 cut(s) 1077
PspXI VCTCGAGB 1 cut(s) 906
PstI CTGCAG 1 cut(s) 64
PsuI RGATCY 4 cut(s) 1219, 1276, 1301, 1459
PvuII CAGCTG 1 cut(s) 522
RsaI GTAC 5 cut(s) 158, 179, 560, 1038, 1344
RsaNI GTAC 5 cut(s) 157, 178, 559, 1037, 1343
SaqAI TTAA 5 cut(s) 101, 234, 681, 708, 852
SatI GCNGC 2 cut(s) 318, 1533
Sau96I GGNCC 2 cut(s) 329, 1077
SchI GAGTC 4 cut(s) 100, 319, 1072, 1505
ScrFI CCNGG 3 cut(s) 206, 628, 629
SduI GDGCHC 2 cut(s) 416, 915
SfaNI GCATC 3 cut(s) 976, 1307, 1544
SfcI CTRYAG 2 cut(s) 60, 1141
Sfr274I CTCGAG 1 cut(s) 906
SfuI TTCGAA 1 cut(s) 943
SinI GGWCC 2 cut(s) 329, 1077
SlaI CTCGAG 1 cut(s) 906
SmaI CCCGGG 1 cut(s) 629
SmlI CTYRAG 2 cut(s) 906, 1050
SmoI CTYRAG 2 cut(s) 906, 1050
SspI AATATT 1 cut(s) 1563
SspMI CTAG 5 cut(s) 110, 219, 764, 1026, 1573
StyD4I CCNGG 3 cut(s) 204, 626, 627
StyI CCWWGG 1 cut(s) 1201
TaaI ACNGT 3 cut(s) 177, 923, 1489
TaiI ACGT 2 cut(s) 249, 745
TaqI TCGA 7 cut(s) 39, 745, 828, 907, 937, 943, 1066
TaqII GACCGA 1 cut(s) 1463
TatI WGTACW 1 cut(s) 1342
TfiI GAWTC 3 cut(s) 266, 932, 1550
Tru1I TTAA 5 cut(s) 101, 234, 681, 708, 852
Tru9I TTAA 5 cut(s) 101, 234, 681, 708, 852
TscAI CASTG 6 cut(s) 64, 416, 448, 569, 669, 1470
TseFI GTSAC 1 cut(s) 635
TseI GCWGC 2 cut(s) 317, 1532
Tsp45I GTSAC 1 cut(s) 635
TspDTI ATGAA 4 cut(s) 801, 819, 941, 942
TspGWI ACGGA 2 cut(s) 215, 1098
TspMI CCCGGG 1 cut(s) 627
TspRI CASTG 6 cut(s) 64, 416, 448, 569, 669, 1470
VneI GTGCAC 1 cut(s) 412
VpaK11BI GGWCC 2 cut(s) 329, 1077
VspI ATTAAT 2 cut(s) 234, 681
XapI RAATTY 4 cut(s) 696, 704, 748, 806
XbaI TCTAGA 1 cut(s) 109
XceI RCATGY 2 cut(s) 172, 483
XhoI CTCGAG 1 cut(s) 906
XmaI CCCGGG 1 cut(s) 627
XmnI GAANNNNTTC 2 cut(s) 792, 1563
XspI CTAG 5 cut(s) 110, 219, 764, 1026, 1573
Zsp2I ATGCAT 3 cut(s) 1113, 1237, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.