MD05G1337400.v1.1

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000086
Physical Location & Seq
Reverse (-)
45908000 .. 45909727
1728 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1337400.v1.1.491

Sequence Viewer

Length: 960 bp
ATGACCAATAATATTCACAGAGAGTTCTCATACAGAAAAATGGGTTACTCAAGACCATTGCTTTTCTTCATTCTTCCTATTATCTTGGGCCTTCATGCTCCCGCCATAGCCGATGACGTTGATAACGGCGTATGCACTACGACGGCCGACTACTGCTGGAGCTGTTCCGGTACTAATGAAACCTTCAACAATGGCAGCAACTACGAACGAAACCTCCACACTGTCCTCTCCTCTTTCTCTTCCAACAAAACCGAAATCAACTCTGGGTTTTACAACTCTTCTCTCGGACAAGGCCCCGAAAAAGTCAATGCAATGGCACTATGCAGGGGAGACGTTCCCCTAAACGACTGTCACACATGTTTCAATGAGTCCATTTCCATTCTCCGGCAGAACTGCACCAATCAAAAGCAAGCGACCATATGGGCACAGCGCTGCACGGTACACTACTCGAACGTCTCAATTTTCGGTGTTGCGGAAGATGATCCGGTTAAGTTTGTGCCCGGCCCGACTAACGCACCAAACGCTGAGCAGTTCAAGCAGGTGCTCAACCCCTTGGTGGTGAATTTAAGTGGGACAGCTGCAGCAGGAGACTCCATGAAAAAATTTGCAGCTGGACATGCACTTGTCCCTGCAACAAATCAAACCATATACGCAATAGTCCAGTGTACCCCTGATTTGGACCGACAAAATTGCAGTGAGTGCCTTGATGAGGCCATCTCGGATATCCCACAATGTTGTGAAGGAAAGGAAGGAGGGAGAGTCCTTAGACCCAGCTGTAATTTGAGGTTTGAGAGCAATCTTTTCTATGACGCAGCATCTGATTCCCTAGTAAATCTTCCAGGCAAACAAGGAAATAATACAGGAAATGGTACGAGTAACATAACAACCAAAGTATCACCATCATCGTTCTTGGGATTGCTATTGTCGCTATGCTTGTCATCGGCATTCGCATTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Stress-antifung

Protein Analysis

320

Amino Acids

34.51

Weight (kDa)

5.51

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 55 - 151 1.2e-22 Salt stress response/antifungal
Stress-antifung PF01657 171 - 265 1.2e-13 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 529
Acc36I ACCTGC 1 cut(s) 529
AciI CCGC 2 cut(s) 102, 473
AclWI GGATC 1 cut(s) 476
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 2 cut(s) 562, 602
AfaI GTAC 4 cut(s) 172, 441, 667, 871
AfeI AGCGCT 1 cut(s) 431
AfiI CCNNNNNNNGG 4 cut(s) 384, 556, 676, 709
AflIII ACRYGT 1 cut(s) 356
AgsI TTSAA 3 cut(s) 187, 364, 535
AjnI CCWGG 1 cut(s) 838
AloI GAACNNNNNNTCC 2 cut(s) 198, 230
AluBI AGCT 4 cut(s) 162, 578, 611, 774
AluI AGCT 4 cut(s) 162, 578, 611, 774
Alw21I GWGCWC 1 cut(s) 546
Alw26I GTCTC 3 cut(s) 324, 460, 582
AlwI GGATC 1 cut(s) 476
AlwNI CAGNNNCTG 1 cut(s) 818
Aor51HI AGCGCT 1 cut(s) 431
AoxI GGCC 5 cut(s) 88, 144, 292, 502, 711
ApeKI GCWGC 6 cut(s) 195, 432, 578, 581, 608, 812
ApoI RAATTY 2 cut(s) 562, 602
AspLEI GCGC 1 cut(s) 432
AspS9I GGNCC 4 cut(s) 88, 293, 503, 679
AsuC2I CCSGG 1 cut(s) 501
AsuHPI GGTGA 2 cut(s) 571, 888
AvaII GGWCC 1 cut(s) 679
BaeGI GKGCMC 2 cut(s) 427, 501
BaeI ACNNNNGTAYC 2 cut(s) 876, 909
Bbv12I GWGCWC 1 cut(s) 546
BbvI GCAGC 6 cut(s) 207, 419, 565, 593, 620, 824
BccI CCATC 2 cut(s) 722, 907
BceAI ACGGC 2 cut(s) 142, 159
BcgI CGANNNNNNTGC 2 cut(s) 672, 706
BciT130I CCWGG 1 cut(s) 840
BcnI CCSGG 1 cut(s) 501
BcoDI GTCTC 3 cut(s) 324, 460, 582
BfaI CTAG 1 cut(s) 827
BfmI CTRYAG 1 cut(s) 579
BfoI RGCGCY 1 cut(s) 433
BfuAI ACCTGC 1 cut(s) 529
BisI GCNGC 6 cut(s) 196, 433, 579, 582, 609, 813
BlpI GCTNAGC 1 cut(s) 525
BlsI GCNGC 6 cut(s) 197, 434, 580, 583, 610, 814
Bme1390I CCNGG 2 cut(s) 501, 840
Bme18I GGWCC 1 cut(s) 679
BmgT120I GGNCC 4 cut(s) 88, 293, 503, 679
BmiI GGNNCC 1 cut(s) 295
BmrFI CCNGG 2 cut(s) 501, 840
BmsI GCATC 1 cut(s) 824
BplI GAGNNNNNCTC 2 cut(s) 701, 733
BpmI CTGGAG 1 cut(s) 178
Bpu1102I GCTNAGC 1 cut(s) 525
BpuEI CTTGAG 1 cut(s) 34
BpuMI CCSGG 1 cut(s) 501
BsaJI CCNNGG 1 cut(s) 552
BsaWI WCCGGW 2 cut(s) 167, 484
BsaXI ACNNNNNCTCC 4 cut(s) 198, 228, 744, 774
Bsc4I CCNNNNNNNGG 4 cut(s) 384, 556, 676, 709
Bse1I ACTGG 1 cut(s) 661
Bse3DI GCAATG 2 cut(s) 56, 318
BseBI CCWGG 1 cut(s) 840
BseDI CCNNGG 1 cut(s) 552
BseLI CCNNNNNNNGG 4 cut(s) 384, 556, 676, 709
BseMI GCAATG 2 cut(s) 56, 318
BseMII CTCAG 1 cut(s) 516
BseNI ACTGG 1 cut(s) 661
BseRI GAGGAG 1 cut(s) 220
BseSI GKGCMC 2 cut(s) 427, 501
BseX3I CGGCCG 1 cut(s) 144
BseXI GCAGC 6 cut(s) 207, 419, 565, 593, 620, 824
BseYI CCCAGC 1 cut(s) 770
BsgI GTGCAG 2 cut(s) 379, 418
Bsh1285I CGRYCG 1 cut(s) 147
BshFI GGCC 5 cut(s) 90, 146, 294, 504, 713
BsiEI CGRYCG 1 cut(s) 147
BsiHKAI GWGCWC 1 cut(s) 546
BsiSI CCGG 4 cut(s) 168, 385, 485, 501
BslFI GGGAC 2 cut(s) 586, 611
BslI CCNNNNNNNGG 4 cut(s) 384, 556, 676, 709
BsmAI GTCTC 3 cut(s) 324, 460, 582
BsmBI CGTCTC 2 cut(s) 324, 460
BsmFI GGGAC 2 cut(s) 586, 611
BsmI GAATGC 1 cut(s) 944
BsnI GGCC 5 cut(s) 90, 146, 294, 504, 713
Bsp1286I GDGCHC 3 cut(s) 427, 501, 546
Bsp143I GATC 1 cut(s) 481
Bsp1720I GCTNAGC 1 cut(s) 525
BspACI CCGC 2 cut(s) 102, 473
BspANI GGCC 5 cut(s) 90, 146, 294, 504, 713
BspCNI CTCAG 1 cut(s) 517
BspLI GGNNCC 1 cut(s) 295
BspMAI CTGCAG 1 cut(s) 583
BspMI ACCTGC 1 cut(s) 529
BspPI GGATC 1 cut(s) 476
BsrDI GCAATG 2 cut(s) 56, 318
BsrI ACTGG 1 cut(s) 661
BssECI CCNNGG 1 cut(s) 552
BssMI GATC 1 cut(s) 481
BssT1I CCWWGG 1 cut(s) 552
Bst2UI CCWGG 1 cut(s) 840
Bst4CI ACNGT 3 cut(s) 223, 350, 439
Bst6I CTCTTC 2 cut(s) 244, 283
BstAPI GCANNNNNTGC 1 cut(s) 699
BstC8I GCNNGC 1 cut(s) 411
BstDEI CTNAG 2 cut(s) 525, 764
BstENI CCTNNNNNAGG 1 cut(s) 707
BstH2I RGCGCY 1 cut(s) 433
BstHHI GCGC 1 cut(s) 432
BstKTI GATC 1 cut(s) 484
BstMAI GTCTC 3 cut(s) 324, 460, 582
BstMBI GATC 1 cut(s) 481
BstMCI CGRYCG 1 cut(s) 147
BstMWI GCNNNNNNNGC 5 cut(s) 521, 535, 617, 699, 925
BstNI CCWGG 1 cut(s) 840
BstNSI RCATGY 2 cut(s) 360, 620
BstSCI CCNGG 2 cut(s) 499, 838
BstSFI CTRYAG 1 cut(s) 579
BstSLI GKGCMC 2 cut(s) 427, 501
BstV1I GCAGC 6 cut(s) 207, 419, 565, 593, 620, 824
BstZI CGGCCG 1 cut(s) 144
BsuRI GGCC 5 cut(s) 90, 146, 294, 504, 713
BtsI GCAGTG 1 cut(s) 700
BtsIMutI CAGTG 3 cut(s) 219, 668, 700
BveI ACCTGC 1 cut(s) 529
Cac8I GCNNGC 1 cut(s) 411
CaiI CAGNNNCTG 1 cut(s) 818
CfoI GCGC 1 cut(s) 432
Cfr13I GGNCC 4 cut(s) 88, 293, 503, 679
CseI GACGC 1 cut(s) 818
Csp6I GTAC 4 cut(s) 171, 440, 666, 870
CviAII CATG 4 cut(s) 95, 357, 595, 617
CviQI GTAC 4 cut(s) 171, 440, 666, 870
DdeI CTNAG 2 cut(s) 525, 764
DpnI GATC 1 cut(s) 483
DpnII GATC 1 cut(s) 481
EaeI YGGCCR 1 cut(s) 144
EagI CGGCCG 1 cut(s) 144
Eam1104I CTCTTC 2 cut(s) 244, 283
EarI CTCTTC 2 cut(s) 244, 283
EclXI CGGCCG 1 cut(s) 144
Eco130I CCWWGG 1 cut(s) 552
Eco32I GATATC 1 cut(s) 724
Eco47I GGWCC 1 cut(s) 679
Eco47III AGCGCT 1 cut(s) 431
Eco52I CGGCCG 1 cut(s) 144
EcoNI CCTNNNNNAGG 1 cut(s) 707
EcoO109I RGGNCCY 1 cut(s) 293
EcoRII CCWGG 1 cut(s) 838
EcoRV GATATC 1 cut(s) 724
EcoT14I CCWWGG 1 cut(s) 552
ErhI CCWWGG 1 cut(s) 552
Esp3I CGTCTC 2 cut(s) 324, 460
FaeI CATG 4 cut(s) 98, 360, 598, 620
FaqI GGGAC 2 cut(s) 586, 611
FatI CATG 4 cut(s) 94, 356, 594, 616
FauI CCCGC 1 cut(s) 109
FauNDI CATATG 1 cut(s) 419
Fnu4HI GCNGC 6 cut(s) 196, 433, 579, 582, 609, 813
Fsp4HI GCNGC 6 cut(s) 196, 433, 579, 582, 609, 813
FspBI CTAG 1 cut(s) 827
GlaI GCGC 1 cut(s) 431
GluI GCNGC 6 cut(s) 196, 433, 579, 582, 609, 813
GsaI CCCAGC 1 cut(s) 774
GsuI CTGGAG 1 cut(s) 178
HaeII RGCGCY 1 cut(s) 433
HaeIII GGCC 5 cut(s) 90, 146, 294, 504, 713
HapII CCGG 4 cut(s) 168, 385, 485, 501
HgaI GACGC 1 cut(s) 818
HhaI GCGC 1 cut(s) 432
Hin1II CATG 4 cut(s) 98, 360, 598, 620
Hin6I GCGC 1 cut(s) 430
HinP1I GCGC 1 cut(s) 430
HinfI GANTC 4 cut(s) 368, 590, 759, 821
HpaII CCGG 4 cut(s) 168, 385, 485, 501
HphI GGTGA 2 cut(s) 571, 888
Hpy166II GTNNAC 2 cut(s) 442, 666
Hpy188I TCNGA 3 cut(s) 287, 721, 820
Hpy188III TCNNGA 1 cut(s) 51
Hpy8I GTNNAC 2 cut(s) 442, 666
Hpy99I CGWCG 1 cut(s) 145
HpyAV CCTTC 4 cut(s) 101, 193, 734, 743
HpyCH4III ACNGT 3 cut(s) 223, 350, 439
HpyCH4IV ACGT 3 cut(s) 117, 333, 453
HpyF10VI GCNNNNNNNGC 5 cut(s) 521, 535, 617, 699, 925
HpyF3I CTNAG 2 cut(s) 525, 764
HpySE526I ACGT 3 cut(s) 117, 333, 453
Hsp92II CATG 4 cut(s) 98, 360, 598, 620
HspAI GCGC 1 cut(s) 430
Kzo9I GATC 1 cut(s) 481
LmnI GCTCC 2 cut(s) 103, 159
Lsp1109I GCAGC 6 cut(s) 207, 419, 565, 593, 620, 824
LweI GCATC 1 cut(s) 824
MaeI CTAG 1 cut(s) 827
MaeII ACGT 3 cut(s) 117, 333, 453
MaeIII GTNAC 3 cut(s) 44, 350, 875
MalI GATC 1 cut(s) 483
MboI GATC 1 cut(s) 481
MboII GAAGA 6 cut(s) 58, 65, 231, 270, 488, 827
MhlI GDGCHC 3 cut(s) 427, 501, 546
MluCI AATT 5 cut(s) 459, 562, 602, 688, 778
MlyI GAGTC 3 cut(s) 377, 584, 768
MmeI TCCRAC 1 cut(s) 267
MnlI CCTC 6 cut(s) 224, 236, 241, 703, 746, 777
MseI TTAA 3 cut(s) 489, 566, 958
MspA1I CMGCKG 3 cut(s) 578, 611, 774
MspI CCGG 4 cut(s) 168, 385, 485, 501
MspR9I CCNGG 2 cut(s) 501, 840
Mva1269I GAATGC 1 cut(s) 944
MvaI CCWGG 1 cut(s) 840
MwoI GCNNNNNNNGC 5 cut(s) 521, 535, 617, 699, 925
NciI CCSGG 1 cut(s) 501
NdeI CATATG 1 cut(s) 419
NdeII GATC 1 cut(s) 481
NlaIII CATG 4 cut(s) 98, 360, 598, 620
NlaIV GGNNCC 1 cut(s) 295
NmuCI GTSAC 1 cut(s) 350
NspI RCATGY 2 cut(s) 360, 620
PaqCI CACCTGC 1 cut(s) 529
PciI ACATGT 1 cut(s) 356
PctI GAATGC 1 cut(s) 944
PfeI GAWTC 1 cut(s) 821
PkrI GCNGC 6 cut(s) 197, 434, 580, 583, 610, 814
PleI GAGTC 3 cut(s) 376, 584, 767
PpsI GAGTC 3 cut(s) 376, 584, 767
PscI ACATGT 1 cut(s) 356
Psp6I CCWGG 1 cut(s) 838
PspFI CCCAGC 1 cut(s) 770
PspGI CCWGG 1 cut(s) 838
PspN4I GGNNCC 1 cut(s) 295
PspPI GGNCC 4 cut(s) 88, 293, 503, 679
PstI CTGCAG 1 cut(s) 583
PstNI CAGNNNCTG 1 cut(s) 818
PvuII CAGCTG 3 cut(s) 578, 611, 774
RsaI GTAC 4 cut(s) 172, 441, 667, 871
RsaNI GTAC 4 cut(s) 171, 440, 666, 870
SaqAI TTAA 3 cut(s) 489, 566, 958
SatI GCNGC 6 cut(s) 196, 433, 579, 582, 609, 813
Sau3AI GATC 1 cut(s) 481
Sau96I GGNCC 4 cut(s) 88, 293, 503, 679
SchI GAGTC 3 cut(s) 377, 584, 768
ScrFI CCNGG 2 cut(s) 501, 840
SduI GDGCHC 3 cut(s) 427, 501, 546
SfaNI GCATC 1 cut(s) 824
SfcI CTRYAG 1 cut(s) 579
SinI GGWCC 1 cut(s) 679
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
Sse9I AATT 5 cut(s) 459, 562, 602, 688, 778
SsiI CCGC 2 cut(s) 102, 473
SspI AATATT 1 cut(s) 13
SspMI CTAG 1 cut(s) 827
StyD4I CCNGG 2 cut(s) 499, 838
StyI CCWWGG 1 cut(s) 552
TaaI ACNGT 3 cut(s) 223, 350, 439
TaiI ACGT 3 cut(s) 120, 336, 456
TaqI TCGA 1 cut(s) 449
TaqII GACCGA 1 cut(s) 696
TasI AATT 5 cut(s) 459, 562, 602, 688, 778
TfiI GAWTC 1 cut(s) 821
Tru1I TTAA 3 cut(s) 489, 566, 958
Tru9I TTAA 3 cut(s) 489, 566, 958
TscAI CASTG 3 cut(s) 226, 668, 700
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 6 cut(s) 195, 432, 578, 581, 608, 812
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 4 cut(s) 58, 83, 192, 611
TspRI CASTG 3 cut(s) 226, 668, 700
VpaK11BI GGWCC 1 cut(s) 679
XagI CCTNNNNNAGG 1 cut(s) 707
XapI RAATTY 2 cut(s) 562, 602
XceI RCATGY 2 cut(s) 360, 620
XspI CTAG 1 cut(s) 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.