Rw5G021130

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
28182646 .. 28186203
3558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G021130.1

Sequence Viewer

Length: 2049 bp
ATGGGATCCTCAGTATGGCTACTTCTTTTCGTCTTCGTTCCCATAACCATACACCACCTTGTTGCTCAACCCATAATAAAAGGCGACGTCTCATGCACTTCGAGGGCTGAATTGTGCTGGAGCTGTGCTGATTCCCGCAAATACACTAATGGCAGCATCTACCAACAAAACCTCATCACCCTCCTCTCCTCCTTTTCCAACACTTCCCAAAACCAAACCAACTATGGCTTTCACAACTCTTCTCTCGGACAAGGCTCCAACAAAGTGAATGCCATTGCATTGTGCAGAGGAGACCTCACACTCGGAGAATGTAGTAGCTGTCTCAGCGACTCCATTCAGATTCTCCTGCGAAACTGTTCATATAAAACGGAAGCAATCTTATGGGCAGAGCCTTGCATGGTACGGTACTCTCAAGACTTAATATTTGGTATTGTGGAGGAGCACCCTTTTATATATCTGCCCAGCCCGAACACCGCGTTAAACCCGGAAGCGTACGGGCAGGTGCTTAACCCCTTGTTGGAAATCTTAAGAGACAGAGCTACTTCAGGTGATTCTCGAAAAAAATATGCAGCAGGACATGCAGTTGTTCCAGCTCCAGCAGGACATGCAGACGATCGCGAACCGATATATGCACATGCGCAGTGCACTCCGGACATGGACAAAGTCAATTGCAGTAATTGCCTGAACAGTTGCATCTCTGCTATTCCACGATGTTGCAGTGGAAAGTCAGGAACAAGAGTTCTTAGACCAAGTTGTAATATAAGGTTTGAGTACAATCTTTTCTACAACTCTACAGCCGATTCAGAATTAAATATTTCAGTTTCAGCTCCAGCTCCAGCTCCAGTTACTATACTTCCACCTAAGCAAGGAAAGAAGAGTAACACAAAAAGAAATATCATCATAACAATTGAGGTTGTGATTGCTTTTGTCACGATGCTTCTCGGTGGCATATGCATTTTCTTAAGAGTCAAGAAGTCAAGGGTAAAACTTGACGATGATTTTTCTGAAGAAATTAGCCTCGTGGAATCGTTACAATATAACTTTGAAGATATTAAATCTGCAACGGATGACTTTTCGGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAGGCTATATAACGGACAATATATAGCTGTGAAAAGACTATCTAAAAGTTCTCAACAGGGTGAACGTGAATTTAAAAATGAAGTCACGTTAGTTGCTCAACTTCAACACCGGAACTTAGTGAGGCTTTTAGGCTTTTGCTTGAAAGGAGAAGAAAGGCTCCTCATTTACGATTATATACCTAATAAAAGTCTTGATCACTTCATTTTTGACCCAACCAATCATGAACATTTGGATTGGGAAACACGTTACAAGATCATAGAAGGAATTGTTCGTGGTCTTCTTTACCTCCATGAAGATTCTCGACTTCGAGTTATTCACCGTGATCTCAAAGCCAGCAACATTTTGTTGGATGAAGATATGAACCCTAAAATTGCAGATTTTGGTATGGCAAGGTTGTTTGTGATGGATCAAACTCAAGCAGATACAAAAACCATTGTTGGGACCTATGGATACATGGCACCTGAATATGCAAGTCATGGGCGCTTTTCTGTCAAGTCAGATGTCTTTAGTTTTGGTGTGTTAGTTCTTGAAATAATTACTGGCAAGAAGAGCCGAAATGGTGAAAATGAAGACGACCTATTAAGCTACGCCTGGAGAAATTGGAGGGATGATACAACTCTAAATATCATCGATCCCATGTTAACAACAGGCTCAAGATCTGAAATAATCAGATGCATCCAGATTGGTTTATTATGTGTCCAAGAAAATTTGAATGACAGACCAACCATGGGTTCAATAGTTTCCATGCTTAATAGTCATTCTCTCAAAATCTCGATACCTTCACGGCCTCCATATTATTGGCCTTATAACACTGAGTCAGAGACATCAGGGTCGGGAATCAGACTTACTGAGACATCTGATACATCCCAAAGCTCTGTGTCAAGAGGTATGATTTCAGATATTACTGAACTACATCCACGCTAG

Protein Analysis

682

Amino Acids

76.31

Weight (kDa)

6.27

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 42 - 138 3.1e-21 Salt stress response/antifungal
Stress-antifung PF01657 162 - 257 1.4e-09 Salt stress response/antifungal
Pkinase PF00069 359 - 622 2.7e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 361 - 625 2.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1932
AarI CACCTGC 1 cut(s) 490
AasI GACNNNNNNGTC 1 cut(s) 1954
AatII GACGTC 1 cut(s) 90
Acc16I TGCGCA 1 cut(s) 639
Acc36I ACCTGC 1 cut(s) 490
AccB1I GGYRCC 1 cut(s) 1582
AccII CGCG 2 cut(s) 476, 618
AccIII TCCGGA 1 cut(s) 649
AciI CCGC 2 cut(s) 136, 474
AclWI GGATC 3 cut(s) 13, 1539, 1751
AcsI RAATTY 2 cut(s) 1193, 1831
AcuI CTGAAG 2 cut(s) 528, 1026
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 4 cut(s) 402, 407, 494, 773
AfiI CCNNNNNNNGG 5 cut(s) 15, 517, 866, 1563, 1853
AflII CTTAAG 2 cut(s) 526, 961
AflIII ACRYGT 1 cut(s) 1367
AgsI TTSAA 6 cut(s) 1046, 1229, 1267, 1655, 1837, 1860
AjnI CCWGG 1 cut(s) 1715
AjuI GAANNNNNNNTTGG 4 cut(s) 1074, 1106, 1840, 1872
AloI GAACNNNNNNTCC 2 cut(s) 723, 755
Alw21I GWGCWC 2 cut(s) 444, 647
Alw26I GTCTC 6 cut(s) 94, 285, 326, 525, 1940, 1970
Alw44I GTGCAC 1 cut(s) 643
AlwI GGATC 3 cut(s) 13, 1539, 1751
Aor13HI TCCGGA 1 cut(s) 649
AoxI GGCC 2 cut(s) 1910, 1925
ApaLI GTGCAC 1 cut(s) 643
ApeKI GCWGC 2 cut(s) 153, 569
ApoI RAATTY 2 cut(s) 1193, 1831
ArsI GACNNNNNNTTYG 2 cut(s) 407, 439
Asp700I GAANNNNTTC 1 cut(s) 355
AspLEI GCGC 2 cut(s) 640, 1608
AspS9I GGNCC 1 cut(s) 1566
AsuC2I CCSGG 1 cut(s) 485
AsuHPI GGTGA 5 cut(s) 169, 560, 1196, 1433, 1697
AvaII GGWCC 1 cut(s) 1566
BaeGI GKGCMC 1 cut(s) 647
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1582
BarI GAAGNNNNNNTAC 1 cut(s) 38
BauI CACGAG 1 cut(s) 1019
BbsI GAAGAC 3 cut(s) 25, 1394, 1701
Bbv12I GWGCWC 2 cut(s) 444, 647
BbvI GCAGC 2 cut(s) 165, 581
BccI CCATC 1 cut(s) 1522
BceAI ACGGC 1 cut(s) 1925
BciT130I CCWGG 1 cut(s) 1717
BciVI GTATCC 1 cut(s) 1568
BclI TGATCA 1 cut(s) 1318
BcnI CCSGG 1 cut(s) 485
BcoDI GTCTC 6 cut(s) 94, 285, 326, 525, 1940, 1970
BfaI CTAG 1 cut(s) 2047
BfmI CTRYAG 1 cut(s) 792
BfoI RGCGCY 1 cut(s) 1609
BfrI CTTAAG 2 cut(s) 526, 961
BfuAI ACCTGC 1 cut(s) 490
BfuI GTATCC 1 cut(s) 1568
BglII AGATCT 1 cut(s) 1781
BisI GCNGC 2 cut(s) 154, 570
BlsI GCNGC 2 cut(s) 155, 571
Bme1390I CCNGG 2 cut(s) 485, 1717
Bme18I GGWCC 1 cut(s) 1566
BmgT120I GGNCC 1 cut(s) 1566
BmiI GGNNCC 5 cut(s) 7, 256, 1283, 1567, 1584
BmrFI CCNGG 2 cut(s) 485, 1717
BmsI GCATC 5 cut(s) 165, 702, 924, 1787, 1809
BpiI GAAGAC 3 cut(s) 25, 1394, 1701
BplI GAGNNNNNCTC 2 cut(s) 279, 311
BpmI CTGGAG 6 cut(s) 139, 579, 813, 819, 825, 1738
Bpu10I CCTNAGC 1 cut(s) 861
BpuEI CTTGAG 3 cut(s) 396, 1524, 1762
BpuMI CCSGG 1 cut(s) 485
Bsa29I ATCGAT 1 cut(s) 1755
BsaHI GRCGYC 1 cut(s) 87
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 1 cut(s) 1851
BsaWI WCCGGW 2 cut(s) 649, 1233
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 517, 866, 1563, 1853
Bse1I ACTGG 2 cut(s) 842, 1669
Bse3DI GCAATG 1 cut(s) 273
BseAI TCCGGA 1 cut(s) 649
BseBI CCWGG 1 cut(s) 1717
BseCI ATCGAT 1 cut(s) 1755
BseDI CCNNGG 1 cut(s) 1851
BseGI GGATG 7 cut(s) 1072, 1084, 1480, 1738, 1800, 1988, 2038
BseLI CCNNNNNNNGG 5 cut(s) 15, 517, 866, 1563, 1853
BseMI GCAATG 1 cut(s) 273
BseMII CTCAG 4 cut(s) 24, 337, 1929, 1965
BseNI ACTGG 2 cut(s) 842, 1669
BseRI GAGGAG 5 cut(s) 173, 178, 303, 452, 1274
BseSI GKGCMC 1 cut(s) 647
BseXI GCAGC 2 cut(s) 165, 581
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 2 cut(s) 476, 618
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 2 cut(s) 1912, 1927
BshNI GGYRCC 1 cut(s) 1582
BshVI ATCGAT 1 cut(s) 1755
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 444, 647
BsiSI CCGG 3 cut(s) 485, 650, 1234
BsiWI CGTACG 1 cut(s) 492
BslFI GGGAC 1 cut(s) 1579
BslI CCNNNNNNNGG 5 cut(s) 15, 517, 866, 1563, 1853
BsmAI GTCTC 6 cut(s) 94, 285, 326, 525, 1940, 1970
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 1579
BsmI GAATGC 1 cut(s) 274
BsnI GGCC 2 cut(s) 1912, 1927
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 2 cut(s) 444, 647
Bsp13I TCCGGA 1 cut(s) 649
Bsp143I GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
Bsp19I CCATGG 1 cut(s) 1851
Bsp68I TCGCGA 1 cut(s) 618
BspACI CCGC 2 cut(s) 136, 474
BspANI GGCC 2 cut(s) 1912, 1927
BspCNI CTCAG 4 cut(s) 23, 336, 1930, 1966
BspDI ATCGAT 1 cut(s) 1755
BspEI TCCGGA 1 cut(s) 649
BspFNI CGCG 2 cut(s) 476, 618
BspHI TCATGA 1 cut(s) 1345
BspLI GGNNCC 5 cut(s) 7, 256, 1283, 1567, 1584
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 3 cut(s) 13, 1539, 1751
BspQI GCTCTTC 1 cut(s) 1667
BspT107I GGYRCC 1 cut(s) 1582
BspTI CTTAAG 2 cut(s) 526, 961
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 273
BsrI ACTGG 2 cut(s) 842, 1669
BssECI CCNNGG 1 cut(s) 1851
BssMI GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
BssNI GRCGYC 1 cut(s) 87
BssSI CACGAG 1 cut(s) 1019
BssT1I CCWWGG 1 cut(s) 1851
Bst2BI CACGAG 1 cut(s) 1019
Bst2UI CCWGG 1 cut(s) 1717
Bst4CI ACNGT 4 cut(s) 356, 405, 689, 1445
Bst6I CTCTTC 3 cut(s) 244, 869, 1667
BstACI GRCGYC 1 cut(s) 87
BstAFI CTTAAG 2 cut(s) 526, 961
BstAPI GCANNNNNTGC 3 cut(s) 578, 605, 678
BstC8I GCNNGC 1 cut(s) 1459
BstDEI CTNAG 7 cut(s) 10, 323, 743, 861, 1240, 1938, 1974
BstDSI CCRYGG 1 cut(s) 1851
BstENI CCTNNNNNAGG 1 cut(s) 864
BstF5I GGATG 7 cut(s) 1072, 1084, 1480, 1738, 1800, 1988, 2038
BstFNI CGCG 2 cut(s) 476, 618
BstH2I RGCGCY 1 cut(s) 1609
BstHHI GCGC 2 cut(s) 640, 1608
BstKTI GATC 8 cut(s) 8, 616, 1321, 1380, 1450, 1534, 1759, 1784
BstMAI GTCTC 6 cut(s) 94, 285, 326, 525, 1940, 1970
BstMBI GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
BstMCI CGRYCG 1 cut(s) 616
BstMWI GCNNNNNNNGC 5 cut(s) 324, 578, 605, 678, 1674
BstNI CCWGG 1 cut(s) 1717
BstNSI RCATGY 3 cut(s) 581, 608, 638
BstSCI CCNGG 2 cut(s) 483, 1715
BstSFI CTRYAG 1 cut(s) 792
BstSLI GKGCMC 1 cut(s) 647
BstUI CGCG 2 cut(s) 476, 618
BstV1I GCAGC 2 cut(s) 165, 581
BstV2I GAAGAC 3 cut(s) 25, 1394, 1701
BstX2I RGATCY 2 cut(s) 5, 1781
BstXI CCANNNNNNTGG 1 cut(s) 1923
BstYI RGATCY 2 cut(s) 5, 1781
Bsu15I ATCGAT 1 cut(s) 1755
BsuI GTATCC 1 cut(s) 1568
BsuRI GGCC 2 cut(s) 1912, 1927
BsuTUI ATCGAT 1 cut(s) 1755
BtgI CCRYGG 1 cut(s) 1851
BtsCI GGATG 7 cut(s) 1072, 1084, 1480, 1738, 1800, 1988, 2038
BtsI GCAGTG 2 cut(s) 647, 724
BtsIMutI CAGTG 3 cut(s) 647, 724, 1935
BtuMI TCGCGA 1 cut(s) 618
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 1 cut(s) 1459
CciI TCATGA 1 cut(s) 1345
CfoI GCGC 2 cut(s) 640, 1608
Cfr13I GGNCC 1 cut(s) 1566
ClaI ATCGAT 1 cut(s) 1755
Csp6I GTAC 4 cut(s) 401, 406, 493, 772
CviQI GTAC 4 cut(s) 401, 406, 493, 772
DdeI CTNAG 7 cut(s) 10, 323, 743, 861, 1240, 1938, 1974
DpnI GATC 8 cut(s) 7, 615, 1320, 1379, 1449, 1533, 1758, 1783
DpnII GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
DraI TTTAAA 1 cut(s) 1198
DrdI GACNNNNNNGTC 1 cut(s) 1954
DseDI GACNNNNNNGTC 1 cut(s) 1954
Eam1104I CTCTTC 3 cut(s) 244, 869, 1667
EarI CTCTTC 3 cut(s) 244, 869, 1667
Eco130I CCWWGG 1 cut(s) 1851
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 1566
Eco57I CTGAAG 2 cut(s) 528, 1026
EcoNI CCTNNNNNAGG 1 cut(s) 864
EcoO109I RGGNCCY 1 cut(s) 1566
EcoRII CCWGG 1 cut(s) 1715
EcoT14I CCWWGG 1 cut(s) 1851
EcoT22I ATGCAT 2 cut(s) 956, 1802
ErhI CCWWGG 1 cut(s) 1851
Esp3I CGTCTC 1 cut(s) 94
FaqI GGGAC 1 cut(s) 1579
FauI CCCGC 1 cut(s) 143
FauNDI CATATG 1 cut(s) 950
FbaI TGATCA 1 cut(s) 1318
Fnu4HI GCNGC 2 cut(s) 154, 570
FokI GGATG 7 cut(s) 1079, 1091, 1487, 1745, 1787, 1975, 2025
Fsp4HI GCNGC 2 cut(s) 154, 570
FspBI CTAG 1 cut(s) 2047
FspI TGCGCA 1 cut(s) 639
GlaI GCGC 2 cut(s) 639, 1607
GluI GCNGC 2 cut(s) 154, 570
GsaI CCCAGC 1 cut(s) 465
GsuI CTGGAG 6 cut(s) 139, 579, 813, 819, 825, 1738
HaeII RGCGCY 1 cut(s) 1609
HaeIII GGCC 2 cut(s) 1912, 1927
HapII CCGG 3 cut(s) 485, 650, 1234
HhaI GCGC 2 cut(s) 640, 1608
Hin1I GRCGYC 1 cut(s) 87
Hin6I GCGC 2 cut(s) 638, 1606
HinP1I GCGC 2 cut(s) 638, 1606
HincII GTYRAC 1 cut(s) 1767
HindII GTYRAC 1 cut(s) 1767
HindIII AAGCTT 1 cut(s) 1088
HpaI GTTAAC 1 cut(s) 1767
HpaII CCGG 3 cut(s) 485, 650, 1234
HphI GGTGA 5 cut(s) 169, 560, 1196, 1433, 1697
Hpy166II GTNNAC 4 cut(s) 645, 1117, 1187, 1767
Hpy8I GTNNAC 4 cut(s) 645, 1117, 1187, 1767
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 2 cut(s) 1379, 1914
HpyCH4III ACNGT 4 cut(s) 356, 405, 689, 1445
HpyCH4IV ACGT 4 cut(s) 87, 1189, 1211, 1369
HpyF10VI GCNNNNNNNGC 5 cut(s) 324, 578, 605, 678, 1674
HpyF3I CTNAG 7 cut(s) 10, 323, 743, 861, 1240, 1938, 1974
HpySE526I ACGT 4 cut(s) 87, 1189, 1211, 1369
Hsp92I GRCGYC 1 cut(s) 87
HspAI GCGC 2 cut(s) 638, 1606
Kpn2I TCCGGA 1 cut(s) 649
Ksp22I TGATCA 1 cut(s) 1318
KspAI GTTAAC 1 cut(s) 1767
Kzo9I GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
LguI GCTCTTC 1 cut(s) 1667
LmnI GCTCC 9 cut(s) 120, 260, 439, 598, 832, 838, 844, 1109, 1287
Lsp1109I GCAGC 2 cut(s) 165, 581
LweI GCATC 5 cut(s) 165, 702, 924, 1787, 1809
MaeI CTAG 1 cut(s) 2047
MaeII ACGT 4 cut(s) 87, 1189, 1211, 1369
MaeIII GTNAC 6 cut(s) 844, 878, 928, 1029, 1207, 1370
MalI GATC 8 cut(s) 7, 615, 1320, 1379, 1449, 1533, 1758, 1783
MboI GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
MfeI CAATTG 2 cut(s) 667, 906
MflI RGATCY 2 cut(s) 5, 1781
MhlI GDGCHC 2 cut(s) 444, 647
MlyI GAGTC 3 cut(s) 323, 975, 1949
MmeI TCCRAC 4 cut(s) 222, 282, 498, 1452
Mph1103I ATGCAT 2 cut(s) 956, 1802
MroI TCCGGA 1 cut(s) 649
MroXI GAANNNNTTC 1 cut(s) 355
MspCI CTTAAG 2 cut(s) 526, 961
MspI CCGG 3 cut(s) 485, 650, 1234
MspR9I CCNGG 2 cut(s) 485, 1717
MunI CAATTG 2 cut(s) 667, 906
Mva1269I GAATGC 1 cut(s) 274
MvaI CCWGG 1 cut(s) 1717
MvnI CGCG 2 cut(s) 476, 618
MwoI GCNNNNNNNGC 5 cut(s) 324, 578, 605, 678, 1674
NciI CCSGG 1 cut(s) 485
NcoI CCATGG 1 cut(s) 1851
NdeI CATATG 1 cut(s) 950
NdeII GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
NlaIV GGNNCC 5 cut(s) 7, 256, 1283, 1567, 1584
NmuCI GTSAC 2 cut(s) 928, 1207
NruI TCGCGA 1 cut(s) 618
NsbI TGCGCA 1 cut(s) 639
NsiI ATGCAT 2 cut(s) 956, 1802
NspI RCATGY 3 cut(s) 581, 608, 638
PagI TCATGA 1 cut(s) 1345
PaqCI CACCTGC 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 1667
PctI GAATGC 1 cut(s) 274
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 7 cut(s) 131, 340, 551, 800, 1025, 1421, 1962
Pfl23II CGTACG 1 cut(s) 492
PflFI GACNNNGTC 1 cut(s) 662
PkrI GCNGC 2 cut(s) 155, 571
Ple19I CGATCG 1 cut(s) 616
PleI GAGTC 3 cut(s) 323, 974, 1948
PpsI GAGTC 3 cut(s) 323, 974, 1948
PpuMI RGGWCCY 1 cut(s) 1566
PsiI TTATAA 1 cut(s) 1932
Psp5II RGGWCCY 1 cut(s) 1566
Psp6I CCWGG 1 cut(s) 1715
PspFI CCCAGC 1 cut(s) 461
PspGI CCWGG 1 cut(s) 1715
PspLI CGTACG 1 cut(s) 492
PspN4I GGNNCC 5 cut(s) 7, 256, 1283, 1567, 1584
PspPI GGNCC 1 cut(s) 1566
PspPPI RGGWCCY 1 cut(s) 1566
PsuI RGATCY 2 cut(s) 5, 1781
PsyI GACNNNGTC 1 cut(s) 662
PvuI CGATCG 1 cut(s) 616
RruI TCGCGA 1 cut(s) 618
RsaI GTAC 4 cut(s) 402, 407, 494, 773
RsaNI GTAC 4 cut(s) 401, 406, 493, 772
SapI GCTCTTC 1 cut(s) 1667
SatI GCNGC 2 cut(s) 154, 570
Sau3AI GATC 8 cut(s) 5, 613, 1318, 1377, 1447, 1531, 1756, 1781
Sau96I GGNCC 1 cut(s) 1566
SchI GAGTC 3 cut(s) 323, 975, 1949
ScrFI CCNGG 2 cut(s) 485, 1717
SduI GDGCHC 2 cut(s) 444, 647
SfaNI GCATC 5 cut(s) 165, 702, 924, 1787, 1809
SfcI CTRYAG 1 cut(s) 792
SinI GGWCC 1 cut(s) 1566
SmlI CTYRAG 5 cut(s) 411, 526, 961, 1539, 1777
SmoI CTYRAG 5 cut(s) 411, 526, 961, 1539, 1777
SsiI CCGC 2 cut(s) 136, 474
SspI AATATT 2 cut(s) 423, 814
SspMI CTAG 1 cut(s) 2047
StyD4I CCNGG 2 cut(s) 483, 1715
StyI CCWWGG 1 cut(s) 1851
TaaI ACNGT 4 cut(s) 356, 405, 689, 1445
TaiI ACGT 4 cut(s) 90, 1192, 1214, 1372
TaqI TCGA 6 cut(s) 101, 556, 1426, 1432, 1755, 1898
TatI WGTACW 1 cut(s) 771
TfiI GAWTC 7 cut(s) 131, 340, 551, 800, 1025, 1421, 1962
TscAI CASTG 3 cut(s) 647, 724, 1942
TseFI GTSAC 2 cut(s) 928, 1207
TseI GCWGC 2 cut(s) 153, 569
Tsp45I GTSAC 2 cut(s) 928, 1207
TspDTI ATGAA 9 cut(s) 348, 1095, 1218, 1315, 1362, 1431, 1491, 1499, 1707
TspGWI ACGGA 3 cut(s) 383, 1079, 1152
TspRI CASTG 3 cut(s) 647, 724, 1942
Tth111I GACNNNGTC 1 cut(s) 662
Vha464I CTTAAG 2 cut(s) 526, 961
VneI GTGCAC 1 cut(s) 643
VpaK11BI GGWCC 1 cut(s) 1566
XagI CCTNNNNNAGG 1 cut(s) 864
XapI RAATTY 2 cut(s) 1193, 1831
XceI RCATGY 3 cut(s) 581, 608, 638
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 1 cut(s) 2047
ZraI GACGTC 1 cut(s) 88
Zsp2I ATGCAT 2 cut(s) 956, 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.