Rroxscaffold_2G00130330

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
66482633 .. 66486456
3824 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00130330.1

Sequence Viewer

Length: 1986 bp
ATGACAATGGTTTCCTTAGCAACTCTATTCTTCTGTTCTCATATTCTGTTACTCGTGGTCACTCAATCCCTTCCTCAGCCATCGTTTTCAGCCTATTCATGTTCCAATGGAAAAGGTAACTACACCGCTAATAGTACCTACCAAACAAATTTAGACACCCTTCTCTCCACACTAGTCTCCACCAACGGCAATGGCTATGGCTTTTACAATTCCTCCTATGCCGAAAGCTCATCCAACCAAGTTTATGCAATCGGACTTTGTAGAGGAGATTTCCTGGAGGATGCTTGTCGTAGCTGCCTCAATGACTCAAGCCACAAGCTCACAGAGCTTTGTCCTAACCAAAAAGAAGCTCTGGTCTTTTATGACACTTGCATGTTACGCTACTCAAACCGATCCCTCTATGGCCTCATGGAGGATTCCCCTCATTTCTATCTCGTGAGTCCAAGAAACATAGCATCATCGGAAGTGGAAGGGTTCTTTGAAGAGCTTTGGAAGCTAATCCAAAGATTGAGTAGTGAAGCTGCAGCGGGTGGTTCACTTCGTAAGTTCGCAGTAAACAGCACAACTACTTCAGATTTAAAGACAATATATGCACAAGCGCAGTGCATGCCAGATTTCCGAGAAAGATTCCGATTGCTTGACATCACAACTTACAGTTACGGGAAGGATGGGGCCAGAATTCTTAAACCAAGTTGTAACATTAGGTATGAGCCTGCTAGCTTCCTCGACCCTGCAAATGTGGCACCACTTCCATCATCGCCACCAATATCTCAGCCTTCACTATCAACCAATACTACAAATTCAGAAGTACCGAAGAAGAGTAATAATTTGCGGACTGTAATCCTTGTGGTTGTGCCAATCACTATGTCTCTGGTGCTAACTGTATGCATCTGCGTTTATTTAAGAGCGAGGAAGACAGAGAAAAAACTTGATCAAAGCAAGCTTCCAGGCGCCGAAGATGCAGATGAAAGTAGAAGTGCAGAATCCTTGCAATTTGACTTTGGCACCATCAAAGTTGTTACAGATGATTTTTCTGAAGCAAATAAACTCGGACAGGGCGGTTTTGGTTCTGTATACAGGGGTAAGCTTCCCAATGGAGAAGAGATAGCAGTGAAAAGGCTCTCTATGCATTCTGGACAAGGAGATTTAGAATTCAAAAATGAGGTCTTACTAGTGGCTAGGCTTCAACACAGAAATTTAGTTAGACTTCTCGGTTTCTGCTTGGAAGGAAATGAAAGGCTTCTTGTCTATGAGTATCTCCCTAACGCAAGTCTTGATAACATCATTTTTGATCCAATCAAGCGCGAACAACTGGATTGGGATAAACGTTATAAAATCATGAAAGGCATTGCTCGAGGGCTACTTTACCTTCATGTTGATTCTCGCCTTAGGATTATTCATCGTGATCTCAAAGCTAGTAACATCTTAATAGATGCAGAAATGAACCCTAAAATTTCAGATTTTGGCATGGCAAGGTTGTTTGTGCATGATGAAACACAAGGCAATACTAATCGTATTGTGGGAACCTACGGATATATGCCTCCCGAATATGTGAAGCATGGACATTTTTCTGTTAAGTCTGATGTCTATAGTTTTGGCGTGTTGATTTTGGAGATAATAAGTGGACAGAAAAATAGTTGCTTCGATCATGGAGAGAATATGGAGACTCTTCCAAGCTATGCATGGAAAAGCTGGAGGGAAGGGAAACCTTCAAATGTGACAGATCCCAGTTTGAAGAATGGTTCAAGGGCTGAAATAATGAGATGCATACACATTGGACTGTTATGTGTGCAAGAAAGTCTAGCTGATAGACCAACCATGGCTTCAGTTATCCTCATGTTCAATAGCTACTCTCTCAATCTCCCAGTACCCTCAAAACCAGCATTTTTAATGTATAGTAGCGTCAAATACAGGAGAAACTTTGTCTCTGTCGAAGTAACCGAAAATGATGATGCTTCATTAATCACTGAAGTAAATCCTCGCTAG

Protein Analysis

661

Amino Acids

74.01

Weight (kDa)

6.87

Isoelectric Point (pI)

45.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 34 - 131 7.1e-25 Salt stress response/antifungal
Pkinase PF00069 345 - 552 1.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 347 - 558 1.3e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1332
AccB1I GGYRCC 3 cut(s) 742, 950, 1004
AccI GTMKAC 1 cut(s) 1074
AccII CGCG 1 cut(s) 1305
AciI CCGC 4 cut(s) 126, 527, 832, 1059
AclI AACGTT 1 cut(s) 1327
AclWI GGATC 3 cut(s) 387, 1286, 1718
AcsI RAATTY 6 cut(s) 148, 678, 799, 1151, 1195, 1452
AcuI CTGAAG 3 cut(s) 555, 1056, 1809
AcyI GRCGYC 1 cut(s) 951
AfaI GTAC 3 cut(s) 136, 810, 1869
AfiI CCNNNNNNNGG 1 cut(s) 412
AgsI TTSAA 7 cut(s) 482, 1156, 1187, 1713, 1735, 1746, 1843
AhlI ACTAGT 2 cut(s) 172, 1171
AjnI CCWGG 2 cut(s) 273, 946
AjuI GAANNNNNNNTTGG 2 cut(s) 1807, 1839
Alw26I GTCTC 4 cut(s) 181, 873, 1658, 1930
AlwI GGATC 3 cut(s) 387, 1286, 1718
Ama87I CYCGRG 1 cut(s) 1353
AoxI GGCC 2 cut(s) 403, 672
ApeKI GCWGC 3 cut(s) 294, 521, 524
ApoI RAATTY 6 cut(s) 148, 678, 799, 1151, 1195, 1452
ArsI GACNNNNNNTTYG 2 cut(s) 1149, 1181
AseI ATTAAT 1 cut(s) 1961
Asp700I GAANNNNTTC 1 cut(s) 1239
AspLEI GCGC 3 cut(s) 601, 953, 1305
AspS9I GGNCC 1 cut(s) 672
AsuNHI GCTAGC 1 cut(s) 716
AvaI CYCGRG 1 cut(s) 1353
AxyI CCTNAGG 1 cut(s) 1388
BanI GGYRCC 3 cut(s) 742, 950, 1004
BauI CACGAG 2 cut(s) 53, 434
BbsI GAAGAC 1 cut(s) 920
BbvCI CCTCAGC 1 cut(s) 75
BbvI GCAGC 3 cut(s) 281, 508, 536
BccI CCATC 4 cut(s) 88, 662, 760, 1016
BceAI ACGGC 1 cut(s) 202
BciT130I CCWGG 2 cut(s) 275, 948
BclI TGATCA 1 cut(s) 931
BcoDI GTCTC 4 cut(s) 181, 873, 1658, 1930
BcuI ACTAGT 2 cut(s) 172, 1171
BfaI CTAG 7 cut(s) 173, 717, 1172, 1179, 1416, 1802, 1984
BfmI CTRYAG 2 cut(s) 522, 1588
BfoI RGCGCY 1 cut(s) 954
BisI GCNGC 3 cut(s) 295, 522, 525
BlsI GCNGC 3 cut(s) 296, 523, 526
Bme1390I CCNGG 2 cut(s) 275, 948
BmeT110I CYCGRG 1 cut(s) 1353
BmgT120I GGNCC 1 cut(s) 672
BmiI GGNNCC 5 cut(s) 673, 744, 952, 1006, 1525
BmrFI CCNGG 2 cut(s) 275, 948
BmrI ACTGGG 2 cut(s) 1722, 1859
BmsI GCATC 7 cut(s) 271, 464, 897, 949, 1423, 1754, 1942
BmtI GCTAGC 1 cut(s) 720
BmuI ACTGGG 2 cut(s) 1722, 1859
BpiI GAAGAC 1 cut(s) 920
BpmI CTGGAG 2 cut(s) 296, 1714
Bpu10I CCTNAGC 2 cut(s) 16, 75
BpuEI CTTGAG 1 cut(s) 292
BsaHI GRCGYC 1 cut(s) 951
BsaJI CCNNGG 1 cut(s) 1818
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 1 cut(s) 412
Bse1I ACTGG 3 cut(s) 1317, 1728, 1865
Bse21I CCTNAGG 1 cut(s) 1388
Bse3DI GCAATG 2 cut(s) 196, 1347
BseBI CCWGG 2 cut(s) 275, 948
BseDI CCNNGG 1 cut(s) 1818
BseGI GGATG 3 cut(s) 230, 286, 673
BseLI CCNNNNNNNGG 1 cut(s) 412
BseMI GCAATG 2 cut(s) 196, 1347
BseMII CTCAG 2 cut(s) 89, 785
BseNI ACTGG 3 cut(s) 1317, 1728, 1865
BseRI GAGGAG 1 cut(s) 279
BseXI GCAGC 3 cut(s) 281, 508, 536
BsgI GTGCAG 1 cut(s) 999
Bsh1236I CGCG 1 cut(s) 1305
BshFI GGCC 2 cut(s) 405, 674
BshNI GGYRCC 3 cut(s) 742, 950, 1004
BsiHKCI CYCGRG 1 cut(s) 1353
BslI CCNNNNNNNGG 1 cut(s) 412
BsmAI GTCTC 4 cut(s) 181, 873, 1658, 1930
BsmI GAATGC 1 cut(s) 1129
BsnI GGCC 2 cut(s) 405, 674
BsoBI CYCGRG 1 cut(s) 1353
Bsp143I GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
Bsp19I CCATGG 1 cut(s) 1818
BspACI CCGC 4 cut(s) 126, 527, 832, 1059
BspANI GGCC 2 cut(s) 405, 674
BspCNI CTCAG 2 cut(s) 88, 784
BspFNI CGCG 1 cut(s) 1305
BspHI TCATGA 1 cut(s) 1338
BspLI GGNNCC 5 cut(s) 673, 744, 952, 1006, 1525
BspMAI CTGCAG 1 cut(s) 526
BspOI GCTAGC 1 cut(s) 720
BspPI GGATC 3 cut(s) 387, 1286, 1718
BspQI GCTCTTC 1 cut(s) 477
BspT107I GGYRCC 3 cut(s) 742, 950, 1004
BsrDI GCAATG 2 cut(s) 196, 1347
BsrI ACTGG 3 cut(s) 1317, 1728, 1865
BssECI CCNNGG 1 cut(s) 1818
BssMI GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
BssNAI GTATAC 1 cut(s) 1075
BssNI GRCGYC 1 cut(s) 951
BssSI CACGAG 2 cut(s) 53, 434
BssT1I CCWWGG 1 cut(s) 1818
Bst1107I GTATAC 1 cut(s) 1075
Bst2BI CACGAG 2 cut(s) 53, 434
Bst2UI CCWGG 2 cut(s) 275, 948
Bst4CI ACNGT 4 cut(s) 656, 838, 883, 1782
Bst6I CTCTTC 4 cut(s) 477, 812, 1095, 1674
BstACI GRCGYC 1 cut(s) 951
BstAPI GCANNNNNTGC 1 cut(s) 607
BstC8I GCNNGC 4 cut(s) 608, 714, 718, 941
BstDEI CTNAG 4 cut(s) 16, 75, 771, 1388
BstDSI CCRYGG 1 cut(s) 1818
BstENI CCTNNNNNAGG 1 cut(s) 410
BstF5I GGATG 3 cut(s) 230, 286, 673
BstFNI CGCG 1 cut(s) 1305
BstH2I RGCGCY 1 cut(s) 954
BstHHI GCGC 3 cut(s) 601, 953, 1305
BstKTI GATC 6 cut(s) 395, 934, 1294, 1408, 1648, 1726
BstMAI GTCTC 4 cut(s) 181, 873, 1658, 1930
BstMBI GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
BstMWI GCNNNNNNNGC 7 cut(s) 325, 378, 493, 607, 740, 959, 1126
BstNI CCWGG 2 cut(s) 275, 948
BstNSI RCATGY 2 cut(s) 376, 610
BstSCI CCNGG 2 cut(s) 273, 946
BstSFI CTRYAG 2 cut(s) 522, 1588
BstUI CGCG 1 cut(s) 1305
BstV1I GCAGC 3 cut(s) 281, 508, 536
BstV2I GAAGAC 1 cut(s) 920
BstX2I RGATCY 1 cut(s) 1723
BstYI RGATCY 1 cut(s) 1723
BstZ17I GTATAC 1 cut(s) 1075
Bsu36I CCTNAGG 1 cut(s) 1388
BsuRI GGCC 2 cut(s) 405, 674
BtgI CCRYGG 1 cut(s) 1818
BtgZI GCGATG 1 cut(s) 741
BtsCI GGATG 3 cut(s) 230, 286, 673
BtsI GCAGTG 2 cut(s) 608, 1116
BtsIMutI CAGTG 3 cut(s) 608, 1116, 1965
Cac8I GCNNGC 4 cut(s) 608, 714, 718, 941
CciI TCATGA 1 cut(s) 1338
CfoI GCGC 3 cut(s) 601, 953, 1305
Cfr13I GGNCC 1 cut(s) 672
CseI GACGC 1 cut(s) 1891
Csp6I GTAC 3 cut(s) 135, 809, 1868
CviQI GTAC 3 cut(s) 135, 809, 1868
DdeI CTNAG 4 cut(s) 16, 75, 771, 1388
DinI GGCGCC 1 cut(s) 952
DpnI GATC 6 cut(s) 394, 933, 1293, 1407, 1647, 1725
DpnII GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
DraI TTTAAA 1 cut(s) 579
Eam1104I CTCTTC 4 cut(s) 477, 812, 1095, 1674
EarI CTCTTC 4 cut(s) 477, 812, 1095, 1674
Eco130I CCWWGG 1 cut(s) 1818
Eco57I CTGAAG 3 cut(s) 555, 1056, 1809
Eco81I CCTNAGG 1 cut(s) 1388
Eco88I CYCGRG 1 cut(s) 1353
EcoNI CCTNNNNNAGG 1 cut(s) 410
EcoRI GAATTC 2 cut(s) 678, 1151
EcoRII CCWGG 2 cut(s) 273, 946
EcoT14I CCWWGG 1 cut(s) 1818
EcoT22I ATGCAT 4 cut(s) 890, 1131, 1684, 1769
EgeI GGCGCC 1 cut(s) 952
EheI GGCGCC 1 cut(s) 952
ErhI CCWWGG 1 cut(s) 1818
FauI CCCGC 1 cut(s) 520
FbaI TGATCA 1 cut(s) 931
FblI GTMKAC 1 cut(s) 1074
Fnu4HI GCNGC 3 cut(s) 295, 522, 525
FokI GGATG 3 cut(s) 217, 293, 680
Fsp4HI GCNGC 3 cut(s) 295, 522, 525
FspBI CTAG 7 cut(s) 173, 717, 1172, 1179, 1416, 1802, 1984
GlaI GCGC 3 cut(s) 600, 952, 1304
GluI GCNGC 3 cut(s) 295, 522, 525
GsuI CTGGAG 2 cut(s) 296, 1714
HaeII RGCGCY 1 cut(s) 954
HaeIII GGCC 2 cut(s) 405, 674
HgaI GACGC 1 cut(s) 1891
HhaI GCGC 3 cut(s) 601, 953, 1305
Hin1I GRCGYC 1 cut(s) 951
Hin6I GCGC 3 cut(s) 599, 951, 1303
HinP1I GCGC 3 cut(s) 599, 951, 1303
HindIII AAGCTT 2 cut(s) 941, 1085
HinfI GANTC 7 cut(s) 305, 416, 439, 627, 983, 1379, 1666
Hpy166II GTNNAC 4 cut(s) 536, 556, 1075, 1625
Hpy188III TCNNGA 6 cut(s) 436, 1134, 1274, 1339, 1403, 1544
Hpy8I GTNNAC 4 cut(s) 536, 556, 1075, 1625
HpyAV CCTTC 9 cut(s) 80, 170, 464, 658, 786, 1220, 1379, 1694, 1719
HpyCH4III ACNGT 4 cut(s) 656, 838, 883, 1782
HpyCH4IV ACGT 1 cut(s) 1327
HpyF10VI GCNNNNNNNGC 7 cut(s) 325, 378, 493, 607, 740, 959, 1126
HpyF3I CTNAG 4 cut(s) 16, 75, 771, 1388
HpySE526I ACGT 1 cut(s) 1327
Hsp92I GRCGYC 1 cut(s) 951
HspAI GCGC 3 cut(s) 599, 951, 1303
KasI GGCGCC 1 cut(s) 950
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
LguI GCTCTTC 1 cut(s) 477
Lsp1109I GCAGC 3 cut(s) 281, 508, 536
LweI GCATC 7 cut(s) 271, 464, 897, 949, 1423, 1754, 1942
MaeI CTAG 7 cut(s) 173, 717, 1172, 1179, 1416, 1802, 1984
MaeII ACGT 1 cut(s) 1327
MalI GATC 6 cut(s) 394, 933, 1293, 1407, 1647, 1725
MboI GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
MboII GAAGA 9 cut(s) 22, 494, 826, 829, 925, 968, 1112, 1661, 1747
MflI RGATCY 1 cut(s) 1723
MluCI AATT 9 cut(s) 148, 208, 678, 799, 826, 992, 1151, 1195, 1452
Mly113I GGCGCC 1 cut(s) 951
MlyI GAGTC 3 cut(s) 299, 448, 1660
MmeI TCCRAC 1 cut(s) 258
Mph1103I ATGCAT 4 cut(s) 890, 1131, 1684, 1769
MroXI GAANNNNTTC 1 cut(s) 1239
MseI TTAA 7 cut(s) 578, 684, 902, 1427, 1575, 1889, 1961
MslI CAYNNNNRTG 1 cut(s) 371
MspA1I CMGCKG 1 cut(s) 527
MspR9I CCNGG 2 cut(s) 275, 948
Mva1269I GAATGC 1 cut(s) 1129
MvaI CCWGG 2 cut(s) 275, 948
MvnI CGCG 1 cut(s) 1305
MwoI GCNNNNNNNGC 7 cut(s) 325, 378, 493, 607, 740, 959, 1126
NarI GGCGCC 1 cut(s) 951
NcoI CCATGG 1 cut(s) 1818
NdeII GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
NheI GCTAGC 1 cut(s) 716
NlaIV GGNNCC 5 cut(s) 673, 744, 952, 1006, 1525
NmuCI GTSAC 2 cut(s) 58, 1717
NsiI ATGCAT 4 cut(s) 890, 1131, 1684, 1769
NspI RCATGY 2 cut(s) 376, 610
PaeI GCATGC 1 cut(s) 610
PaeR7I CTCGAG 1 cut(s) 1353
PagI TCATGA 1 cut(s) 1338
PciSI GCTCTTC 1 cut(s) 477
PcsI WCGNNNNNNNCGW 1 cut(s) 1938
PctI GAATGC 1 cut(s) 1129
PdmI GAANNNNTTC 1 cut(s) 1239
PfeI GAWTC 4 cut(s) 416, 627, 983, 1379
PfoI TCCNGGA 1 cut(s) 273
PkrI GCNGC 3 cut(s) 296, 523, 526
PleI GAGTC 3 cut(s) 299, 447, 1660
PluTI GGCGCC 1 cut(s) 954
PpsI GAGTC 3 cut(s) 299, 447, 1660
PshBI ATTAAT 1 cut(s) 1961
PsiI TTATAA 1 cut(s) 1332
Psp1406I AACGTT 1 cut(s) 1327
Psp6I CCWGG 2 cut(s) 273, 946
PspGI CCWGG 2 cut(s) 273, 946
PspN4I GGNNCC 5 cut(s) 673, 744, 952, 1006, 1525
PspPI GGNCC 1 cut(s) 672
PspXI VCTCGAGB 1 cut(s) 1353
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 1 cut(s) 1723
RsaI GTAC 3 cut(s) 136, 810, 1869
RsaNI GTAC 3 cut(s) 135, 809, 1868
RseI CAYNNNNRTG 1 cut(s) 371
SapI GCTCTTC 1 cut(s) 477
SaqAI TTAA 7 cut(s) 578, 684, 902, 1427, 1575, 1889, 1961
SatI GCNGC 3 cut(s) 295, 522, 525
Sau3AI GATC 6 cut(s) 392, 931, 1291, 1405, 1645, 1723
Sau96I GGNCC 1 cut(s) 672
SchI GAGTC 3 cut(s) 299, 448, 1660
ScrFI CCNGG 2 cut(s) 275, 948
SfaNI GCATC 7 cut(s) 271, 464, 897, 949, 1423, 1754, 1942
SfcI CTRYAG 2 cut(s) 522, 1588
SfoI GGCGCC 1 cut(s) 952
Sfr274I CTCGAG 1 cut(s) 1353
SlaI CTCGAG 1 cut(s) 1353
SmiMI CAYNNNNRTG 1 cut(s) 371
SmlI CTYRAG 2 cut(s) 307, 1353
SmoI CTYRAG 2 cut(s) 307, 1353
SpeI ACTAGT 2 cut(s) 172, 1171
SphI GCATGC 1 cut(s) 610
Sse9I AATT 9 cut(s) 148, 208, 678, 799, 826, 992, 1151, 1195, 1452
SsiI CCGC 4 cut(s) 126, 527, 832, 1059
SspDI GGCGCC 1 cut(s) 950
SspMI CTAG 7 cut(s) 173, 717, 1172, 1179, 1416, 1802, 1984
StyD4I CCNGG 2 cut(s) 273, 946
StyI CCWWGG 1 cut(s) 1818
TaaI ACNGT 4 cut(s) 656, 838, 883, 1782
TaiI ACGT 1 cut(s) 1330
TaqI TCGA 4 cut(s) 726, 1354, 1644, 1932
TasI AATT 9 cut(s) 148, 208, 678, 799, 826, 992, 1151, 1195, 1452
TfiI GAWTC 4 cut(s) 416, 627, 983, 1379
Tru1I TTAA 7 cut(s) 578, 684, 902, 1427, 1575, 1889, 1961
Tru9I TTAA 7 cut(s) 578, 684, 902, 1427, 1575, 1889, 1961
TscAI CASTG 3 cut(s) 608, 1116, 1972
TseFI GTSAC 2 cut(s) 58, 1717
TseI GCWGC 3 cut(s) 294, 521, 524
Tsp45I GTSAC 2 cut(s) 58, 1717
TspDTI ATGAA 9 cut(s) 87, 981, 1248, 1355, 1361, 1388, 1457, 1506, 1947
TspGWI ACGGA 1 cut(s) 1545
TspRI CASTG 3 cut(s) 608, 1116, 1972
VspI ATTAAT 1 cut(s) 1961
XagI CCTNNNNNAGG 1 cut(s) 410
XapI RAATTY 6 cut(s) 148, 678, 799, 1151, 1195, 1452
XceI RCATGY 2 cut(s) 376, 610
XcmI CCANNNNNNNNNTGG 1 cut(s) 1680
XhoI CTCGAG 1 cut(s) 1353
XmiI GTMKAC 1 cut(s) 1074
XmnI GAANNNNTTC 1 cut(s) 1239
XspI CTAG 7 cut(s) 173, 717, 1172, 1179, 1416, 1802, 1984
Zsp2I ATGCAT 4 cut(s) 890, 1131, 1684, 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.