Cysteine-rich receptor-like protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Stress-antifung | PF01657 | 43 - 124 | 7.5e-12 | Salt stress response/antifungal |
| Stress-antifung | PF01657 | 148 - 235 | 2.8e-11 | Salt stress response/antifungal |
| Pkinase | PF00069 | 341 - 607 | 1.3e-48 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 343 - 610 | 1.1e-46 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1065 |
| Acc36I | ACCTGC | 1 cut(s) | 1876 |
| AccB1I | GGYRCC | 2 cut(s) | 155, 1528 |
| AccBSI | CCGCTC | 1 cut(s) | 663 |
| AccII | CGCG | 2 cut(s) | 473, 1392 |
| AccIII | TCCGGA | 1 cut(s) | 583 |
| AciI | CCGC | 7 cut(s) | 141, 425, 432, 527, 597, 663, 1552 |
| AclWI | GGATC | 4 cut(s) | 204, 1274, 1485, 1741 |
| AcoI | YGGCCR | 2 cut(s) | 1039, 1549 |
| AcsI | RAATTY | 6 cut(s) | 113, 481, 508, 518, 672, 1139 |
| AcuI | CTGAAG | 4 cut(s) | 486, 972, 1561, 1797 |
| AcyI | GRCGYC | 1 cut(s) | 1529 |
| AfaI | GTAC | 5 cut(s) | 164, 365, 440, 707, 1857 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 15, 797, 1509 |
| AflII | CTTAAG | 1 cut(s) | 617 |
| AflIII | ACRYGT | 2 cut(s) | 1313, 1908 |
| AgsI | TTSAA | 7 cut(s) | 478, 923, 992, 1081, 1175, 1734, 1959 |
| AjiI | CACGTC | 1 cut(s) | 1911 |
| AjnI | CCWGG | 4 cut(s) | 544, 640, 796, 1670 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1795, 1827 |
| Alw21I | GWGCWC | 1 cut(s) | 581 |
| Alw44I | GTGCAC | 1 cut(s) | 577 |
| AlwI | GGATC | 4 cut(s) | 204, 1274, 1485, 1741 |
| Aor13HI | TCCGGA | 1 cut(s) | 583 |
| AoxI | GGCC | 3 cut(s) | 91, 1039, 1549 |
| ApaLI | GTGCAC | 1 cut(s) | 577 |
| ApeKI | GCWGC | 3 cut(s) | 107, 497, 524 |
| ApoI | RAATTY | 6 cut(s) | 113, 481, 508, 518, 672, 1139 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1557, 1589 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 313 |
| AspA2I | CCTAGG | 1 cut(s) | 1198 |
| AspLEI | GCGC | 2 cut(s) | 418, 1531 |
| AspS9I | GGNCC | 3 cut(s) | 400, 1512, 1654 |
| AsuHPI | GGTGA | 4 cut(s) | 155, 563, 1142, 1652 |
| AsuII | TTCGAA | 1 cut(s) | 1378 |
| AvaII | GGWCC | 3 cut(s) | 400, 1512, 1654 |
| AvrII | CCTAGG | 1 cut(s) | 1198 |
| BaeGI | GKGCMC | 1 cut(s) | 581 |
| BanI | GGYRCC | 2 cut(s) | 155, 1528 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1143, 1175 |
| BbsI | GAAGAC | 2 cut(s) | 1340, 1567 |
| Bbv12I | GWGCWC | 1 cut(s) | 581 |
| BbvI | GCAGC | 3 cut(s) | 119, 484, 536 |
| BccI | CCATC | 2 cut(s) | 945, 1867 |
| BceAI | ACGGC | 2 cut(s) | 106, 154 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1860, 1894 |
| BciT130I | CCWGG | 4 cut(s) | 546, 642, 798, 1672 |
| BfaI | CTAG | 5 cut(s) | 669, 1199, 1418, 1914, 1984 |
| BfmI | CTRYAG | 2 cut(s) | 45, 726 |
| BfoI | RGCGCY | 1 cut(s) | 1532 |
| BfrI | CTTAAG | 1 cut(s) | 617 |
| BfuAI | ACCTGC | 1 cut(s) | 1876 |
| BglII | AGATCT | 1 cut(s) | 1001 |
| BisI | GCNGC | 4 cut(s) | 108, 498, 525, 1552 |
| BlnI | CCTAGG | 1 cut(s) | 1198 |
| BlsI | GCNGC | 4 cut(s) | 109, 499, 526, 1553 |
| Bme1390I | CCNGG | 4 cut(s) | 546, 642, 798, 1672 |
| Bme18I | GGWCC | 3 cut(s) | 400, 1512, 1654 |
| BmgBI | CACGTC | 1 cut(s) | 1911 |
| BmgT120I | GGNCC | 3 cut(s) | 400, 1512, 1654 |
| BmiI | GGNNCC | 7 cut(s) | 7, 157, 402, 1196, 1229, 1513, 1530 |
| BmrFI | CCNGG | 4 cut(s) | 546, 642, 798, 1672 |
| BmsI | GCATC | 4 cut(s) | 636, 1742, 1764, 1928 |
| BpiI | GAAGAC | 2 cut(s) | 1340, 1567 |
| BpmI | CTGGAG | 2 cut(s) | 759, 765 |
| Bpu10I | CCTNAGC | 1 cut(s) | 792 |
| Bpu14I | TTCGAA | 1 cut(s) | 1378 |
| BpuEI | CTTGAG | 3 cut(s) | 741, 1470, 1619 |
| Bsa29I | ATCGAT | 1 cut(s) | 208 |
| BsaHI | GRCGYC | 1 cut(s) | 1529 |
| BsaJI | CCNNGG | 4 cut(s) | 797, 1042, 1198, 1806 |
| BsaWI | WCCGGW | 1 cut(s) | 583 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 763, 793 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 15, 797, 1509 |
| Bse1I | ACTGG | 1 cut(s) | 782 |
| Bse3DI | GCAATG | 1 cut(s) | 849 |
| BseAI | TCCGGA | 1 cut(s) | 583 |
| BseBI | CCWGG | 4 cut(s) | 546, 642, 798, 1672 |
| BseCI | ATCGAT | 1 cut(s) | 208 |
| BseDI | CCNNGG | 4 cut(s) | 797, 1042, 1198, 1806 |
| BseGI | GGATG | 5 cut(s) | 650, 1576, 1693, 1755, 1859 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 15, 797, 1509 |
| BseMI | GCAATG | 1 cut(s) | 849 |
| BseMII | CTCAG | 3 cut(s) | 116, 285, 1866 |
| BseNI | ACTGG | 1 cut(s) | 782 |
| BseRI | GAGGAG | 4 cut(s) | 176, 181, 223, 1220 |
| BseSI | GKGCMC | 1 cut(s) | 581 |
| BseXI | GCAGC | 3 cut(s) | 119, 484, 536 |
| BseYI | CCCAGC | 1 cut(s) | 419 |
| BsgI | GTGCAG | 1 cut(s) | 593 |
| Bsh1236I | CGCG | 2 cut(s) | 473, 1392 |
| BshFI | GGCC | 3 cut(s) | 93, 1041, 1551 |
| BshNI | GGYRCC | 2 cut(s) | 155, 1528 |
| BshVI | ATCGAT | 1 cut(s) | 208 |
| BsiHKAI | GWGCWC | 1 cut(s) | 581 |
| BsiSI | CCGG | 1 cut(s) | 584 |
| BslFI | GGGAC | 2 cut(s) | 543, 1525 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 15, 797, 1509 |
| BsmFI | GGGAC | 2 cut(s) | 543, 1525 |
| BsmI | GAATGC | 1 cut(s) | 268 |
| BsnI | GGCC | 3 cut(s) | 93, 1041, 1551 |
| Bsp119I | TTCGAA | 1 cut(s) | 1378 |
| Bsp1286I | GDGCHC | 1 cut(s) | 581 |
| Bsp13I | TCCGGA | 1 cut(s) | 583 |
| Bsp143I | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| Bsp19I | CCATGG | 1 cut(s) | 1806 |
| Bsp68I | TCGCGA | 1 cut(s) | 1392 |
| BspACI | CCGC | 7 cut(s) | 141, 425, 432, 527, 597, 663, 1552 |
| BspANI | GGCC | 3 cut(s) | 93, 1041, 1551 |
| BspCNI | CTCAG | 3 cut(s) | 115, 286, 1865 |
| BspDI | ATCGAT | 1 cut(s) | 208 |
| BspEI | TCCGGA | 1 cut(s) | 583 |
| BspFNI | CGCG | 2 cut(s) | 473, 1392 |
| BspHI | TCATGA | 1 cut(s) | 940 |
| BspLI | GGNNCC | 7 cut(s) | 7, 157, 402, 1196, 1229, 1513, 1530 |
| BspMI | ACCTGC | 1 cut(s) | 1876 |
| BspPI | GGATC | 4 cut(s) | 204, 1274, 1485, 1741 |
| BspT104I | TTCGAA | 1 cut(s) | 1378 |
| BspT107I | GGYRCC | 2 cut(s) | 155, 1528 |
| BspTI | CTTAAG | 1 cut(s) | 617 |
| BsrBI | CCGCTC | 1 cut(s) | 663 |
| BsrDI | GCAATG | 1 cut(s) | 849 |
| BsrI | ACTGG | 1 cut(s) | 782 |
| BssECI | CCNNGG | 4 cut(s) | 797, 1042, 1198, 1806 |
| BssMI | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| BssNI | GRCGYC | 1 cut(s) | 1529 |
| BssT1I | CCWWGG | 3 cut(s) | 1042, 1198, 1806 |
| Bst2UI | CCWGG | 4 cut(s) | 546, 642, 798, 1672 |
| Bst4CI | ACNGT | 3 cut(s) | 541, 710, 1060 |
| Bst6I | CTCTTC | 3 cut(s) | 205, 390, 1212 |
| BstACI | GRCGYC | 1 cut(s) | 1529 |
| BstAFI | CTTAAG | 1 cut(s) | 617 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 612 |
| BstBI | TTCGAA | 1 cut(s) | 1378 |
| BstC8I | GCNNGC | 1 cut(s) | 425 |
| BstDEI | CTNAG | 8 cut(s) | 52, 102, 294, 792, 1186, 1403, 1661, 1852 |
| BstDSI | CCRYGG | 1 cut(s) | 1806 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 795 |
| BstF5I | GGATG | 5 cut(s) | 650, 1576, 1693, 1755, 1859 |
| BstFNI | CGCG | 2 cut(s) | 473, 1392 |
| BstH2I | RGCGCY | 1 cut(s) | 1532 |
| BstHHI | GCGC | 2 cut(s) | 418, 1531 |
| BstKTI | GATC | 6 cut(s) | 212, 1004, 1282, 1396, 1480, 1749 |
| BstMBI | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 228, 424, 440, 533, 603, 612 |
| BstNI | CCWGG | 4 cut(s) | 546, 642, 798, 1672 |
| BstNSI | RCATGY | 2 cut(s) | 358, 536 |
| BstSCI | CCNGG | 4 cut(s) | 544, 640, 796, 1670 |
| BstSFI | CTRYAG | 2 cut(s) | 45, 726 |
| BstSLI | GKGCMC | 1 cut(s) | 581 |
| BstUI | CGCG | 2 cut(s) | 473, 1392 |
| BstV1I | GCAGC | 3 cut(s) | 119, 484, 536 |
| BstV2I | GAAGAC | 2 cut(s) | 1340, 1567 |
| BstX2I | RGATCY | 1 cut(s) | 1001 |
| BstYI | RGATCY | 1 cut(s) | 1001 |
| Bsu15I | ATCGAT | 1 cut(s) | 208 |
| BsuRI | GGCC | 3 cut(s) | 93, 1041, 1551 |
| BsuTUI | ATCGAT | 1 cut(s) | 208 |
| BtgI | CCRYGG | 1 cut(s) | 1806 |
| BtgZI | GCGATG | 1 cut(s) | 1373 |
| BtrI | CACGTC | 1 cut(s) | 1911 |
| BtsCI | GGATG | 5 cut(s) | 650, 1576, 1693, 1755, 1859 |
| BtsI | GCAGTG | 1 cut(s) | 581 |
| BtsIMutI | CAGTG | 2 cut(s) | 510, 581 |
| BtuMI | TCGCGA | 1 cut(s) | 1392 |
| BveI | ACCTGC | 1 cut(s) | 1876 |
| Cac8I | GCNNGC | 1 cut(s) | 425 |
| CciI | TCATGA | 1 cut(s) | 940 |
| CfoI | GCGC | 2 cut(s) | 418, 1531 |
| Cfr13I | GGNCC | 3 cut(s) | 400, 1512, 1654 |
| ClaI | ATCGAT | 1 cut(s) | 208 |
| CseI | GACGC | 1 cut(s) | 155 |
| Csp6I | GTAC | 5 cut(s) | 163, 364, 439, 706, 1856 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1932, 1967 |
| CviQI | GTAC | 5 cut(s) | 163, 364, 439, 706, 1856 |
| DdeI | CTNAG | 8 cut(s) | 52, 102, 294, 792, 1186, 1403, 1661, 1852 |
| DinI | GGCGCC | 1 cut(s) | 1530 |
| DpnI | GATC | 6 cut(s) | 211, 1003, 1281, 1395, 1479, 1748 |
| DpnII | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| DraI | TTTAAA | 1 cut(s) | 1144 |
| EaeI | YGGCCR | 2 cut(s) | 1039, 1549 |
| Eam1104I | CTCTTC | 3 cut(s) | 205, 390, 1212 |
| EarI | CTCTTC | 3 cut(s) | 205, 390, 1212 |
| Eco130I | CCWWGG | 3 cut(s) | 1042, 1198, 1806 |
| Eco47I | GGWCC | 3 cut(s) | 400, 1512, 1654 |
| Eco57I | CTGAAG | 4 cut(s) | 486, 972, 1561, 1797 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 795 |
| EcoO109I | RGGNCCY | 3 cut(s) | 400, 1512, 1654 |
| EcoRI | GAATTC | 3 cut(s) | 113, 508, 672 |
| EcoRII | CCWGG | 4 cut(s) | 544, 640, 796, 1670 |
| EcoT14I | CCWWGG | 3 cut(s) | 1042, 1198, 1806 |
| EcoT22I | ATGCAT | 2 cut(s) | 887, 1757 |
| EgeI | GGCGCC | 1 cut(s) | 1530 |
| EheI | GGCGCC | 1 cut(s) | 1530 |
| ErhI | CCWWGG | 3 cut(s) | 1042, 1198, 1806 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 808, 840 |
| FaqI | GGGAC | 2 cut(s) | 543, 1525 |
| FauI | CCCGC | 2 cut(s) | 432, 520 |
| Fnu4HI | GCNGC | 4 cut(s) | 108, 498, 525, 1552 |
| FokI | GGATG | 5 cut(s) | 657, 1583, 1700, 1742, 1846 |
| Fsp4HI | GCNGC | 4 cut(s) | 108, 498, 525, 1552 |
| FspBI | CTAG | 5 cut(s) | 669, 1199, 1418, 1914, 1984 |
| GlaI | GCGC | 2 cut(s) | 417, 1530 |
| GluI | GCNGC | 4 cut(s) | 108, 498, 525, 1552 |
| GsaI | CCCAGC | 1 cut(s) | 423 |
| GsuI | CTGGAG | 2 cut(s) | 759, 765 |
| HaeII | RGCGCY | 1 cut(s) | 1532 |
| HaeIII | GGCC | 3 cut(s) | 93, 1041, 1551 |
| HapII | CCGG | 1 cut(s) | 584 |
| HgaI | GACGC | 1 cut(s) | 155 |
| HhaI | GCGC | 2 cut(s) | 418, 1531 |
| Hin1I | GRCGYC | 1 cut(s) | 1529 |
| Hin6I | GCGC | 2 cut(s) | 416, 1529 |
| HinP1I | GCGC | 2 cut(s) | 416, 1529 |
| HincII | GTYRAC | 2 cut(s) | 283, 1722 |
| HindII | GTYRAC | 2 cut(s) | 283, 1722 |
| HindIII | AAGCTT | 1 cut(s) | 1927 |
| HpaII | CCGG | 1 cut(s) | 584 |
| HphI | GGTGA | 4 cut(s) | 155, 563, 1142, 1652 |
| Hpy166II | GTNNAC | 4 cut(s) | 283, 579, 1133, 1722 |
| Hpy188III | TCNNGA | 6 cut(s) | 584, 941, 1371, 1391, 1598, 1734 |
| Hpy8I | GTNNAC | 4 cut(s) | 283, 579, 1133, 1722 |
| HpyAV | CCTTC | 2 cut(s) | 205, 1667 |
| HpyCH4III | ACNGT | 3 cut(s) | 541, 710, 1060 |
| HpyCH4IV | ACGT | 3 cut(s) | 1135, 1315, 1910 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 228, 424, 440, 533, 603, 612 |
| HpyF3I | CTNAG | 8 cut(s) | 52, 102, 294, 792, 1186, 1403, 1661, 1852 |
| HpySE526I | ACGT | 3 cut(s) | 1135, 1315, 1910 |
| Hsp92I | GRCGYC | 1 cut(s) | 1529 |
| HspAI | GCGC | 2 cut(s) | 416, 1529 |
| KasI | GGCGCC | 1 cut(s) | 1528 |
| Kpn2I | TCCGGA | 1 cut(s) | 583 |
| Kzo9I | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| LmnI | GCTCC | 7 cut(s) | 73, 236, 665, 784, 1200, 1233, 1490 |
| Lsp1109I | GCAGC | 3 cut(s) | 119, 484, 536 |
| LweI | GCATC | 4 cut(s) | 636, 1742, 1764, 1928 |
| MaeI | CTAG | 5 cut(s) | 669, 1199, 1418, 1914, 1984 |
| MaeII | ACGT | 3 cut(s) | 1135, 1315, 1910 |
| MaeIII | GTNAC | 6 cut(s) | 143, 488, 760, 859, 1158, 1316 |
| MalI | GATC | 6 cut(s) | 211, 1003, 1281, 1395, 1479, 1748 |
| MbiI | CCGCTC | 1 cut(s) | 663 |
| MboI | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| MfeI | CAATTG | 1 cut(s) | 267 |
| MflI | RGATCY | 1 cut(s) | 1001 |
| MhlI | GDGCHC | 1 cut(s) | 581 |
| Mly113I | GGCGCC | 1 cut(s) | 1529 |
| MlyI | GAGTC | 4 cut(s) | 209, 281, 906, 1101 |
| MmeI | TCCRAC | 2 cut(s) | 237, 791 |
| Mph1103I | ATGCAT | 2 cut(s) | 887, 1757 |
| MroI | TCCGGA | 1 cut(s) | 583 |
| MroXI | GAANNNNTTC | 1 cut(s) | 313 |
| MslI | CAYNNNNRTG | 1 cut(s) | 839 |
| MspA1I | CMGCKG | 4 cut(s) | 110, 527, 597, 731 |
| MspCI | CTTAAG | 1 cut(s) | 617 |
| MspI | CCGG | 1 cut(s) | 584 |
| MspR9I | CCNGG | 4 cut(s) | 546, 642, 798, 1672 |
| MunI | CAATTG | 1 cut(s) | 267 |
| Mva1269I | GAATGC | 1 cut(s) | 268 |
| MvaI | CCWGG | 4 cut(s) | 546, 642, 798, 1672 |
| MvnI | CGCG | 2 cut(s) | 473, 1392 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 228, 424, 440, 533, 603, 612 |
| NarI | GGCGCC | 1 cut(s) | 1529 |
| NcoI | CCATGG | 1 cut(s) | 1806 |
| NdeII | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| NlaIV | GGNNCC | 7 cut(s) | 7, 157, 402, 1196, 1229, 1513, 1530 |
| NmeAIII | GCCGAG | 1 cut(s) | 1017 |
| NmuCI | GTSAC | 3 cut(s) | 143, 488, 859 |
| NruI | TCGCGA | 1 cut(s) | 1392 |
| NsiI | ATGCAT | 2 cut(s) | 887, 1757 |
| NspI | RCATGY | 2 cut(s) | 358, 536 |
| NspV | TTCGAA | 1 cut(s) | 1378 |
| PagI | TCATGA | 1 cut(s) | 940 |
| PctI | GAATGC | 1 cut(s) | 268 |
| PdmI | GAANNNNTTC | 1 cut(s) | 313 |
| PfeI | GAWTC | 6 cut(s) | 22, 734, 971, 1367, 1712, 1895 |
| PflFI | GACNNNGTC | 1 cut(s) | 404 |
| PfoI | TCCNGGA | 2 cut(s) | 544, 640 |
| PkrI | GCNGC | 4 cut(s) | 109, 499, 526, 1553 |
| PleI | GAGTC | 4 cut(s) | 209, 281, 905, 1101 |
| PluTI | GGCGCC | 1 cut(s) | 1532 |
| PpsI | GAGTC | 4 cut(s) | 209, 281, 905, 1101 |
| PpuMI | RGGWCCY | 3 cut(s) | 400, 1512, 1654 |
| PsiI | TTATAA | 1 cut(s) | 1065 |
| Psp5II | RGGWCCY | 3 cut(s) | 400, 1512, 1654 |
| Psp6I | CCWGG | 4 cut(s) | 544, 640, 796, 1670 |
| PspFI | CCCAGC | 1 cut(s) | 419 |
| PspGI | CCWGG | 4 cut(s) | 544, 640, 796, 1670 |
| PspN4I | GGNNCC | 7 cut(s) | 7, 157, 402, 1196, 1229, 1513, 1530 |
| PspPI | GGNCC | 3 cut(s) | 400, 1512, 1654 |
| PspPPI | RGGWCCY | 3 cut(s) | 400, 1512, 1654 |
| PsuI | RGATCY | 1 cut(s) | 1001 |
| PsyI | GACNNNGTC | 1 cut(s) | 404 |
| PvuII | CAGCTG | 2 cut(s) | 110, 731 |
| RruI | TCGCGA | 1 cut(s) | 1392 |
| RsaI | GTAC | 5 cut(s) | 164, 365, 440, 707, 1857 |
| RsaNI | GTAC | 5 cut(s) | 163, 364, 439, 706, 1856 |
| RseI | CAYNNNNRTG | 1 cut(s) | 839 |
| SatI | GCNGC | 4 cut(s) | 108, 498, 525, 1552 |
| Sau3AI | GATC | 6 cut(s) | 209, 1001, 1279, 1393, 1477, 1746 |
| Sau96I | GGNCC | 3 cut(s) | 400, 1512, 1654 |
| SchI | GAGTC | 4 cut(s) | 209, 281, 906, 1101 |
| ScrFI | CCNGG | 4 cut(s) | 546, 642, 798, 1672 |
| SduI | GDGCHC | 1 cut(s) | 581 |
| SfaNI | GCATC | 4 cut(s) | 636, 1742, 1764, 1928 |
| SfcI | CTRYAG | 2 cut(s) | 45, 726 |
| SfoI | GGCGCC | 1 cut(s) | 1530 |
| SfuI | TTCGAA | 1 cut(s) | 1378 |
| SinI | GGWCC | 3 cut(s) | 400, 1512, 1654 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 839 |
| SmlI | CTYRAG | 4 cut(s) | 617, 756, 1485, 1598 |
| SmoI | CTYRAG | 4 cut(s) | 617, 756, 1485, 1598 |
| SsiI | CCGC | 7 cut(s) | 141, 425, 432, 527, 597, 663, 1552 |
| SspDI | GGCGCC | 1 cut(s) | 1528 |
| SspI | AATATT | 3 cut(s) | 381, 1705, 1963 |
| SspMI | CTAG | 5 cut(s) | 669, 1199, 1418, 1914, 1984 |
| StyD4I | CCNGG | 4 cut(s) | 544, 640, 796, 1670 |
| StyI | CCWWGG | 3 cut(s) | 1042, 1198, 1806 |
| TaaI | ACNGT | 3 cut(s) | 541, 710, 1060 |
| TaiI | ACGT | 3 cut(s) | 1138, 1318, 1913 |
| TaqI | TCGA | 3 cut(s) | 208, 1372, 1378 |
| TauI | GCSGC | 1 cut(s) | 1554 |
| TfiI | GAWTC | 6 cut(s) | 22, 734, 971, 1367, 1712, 1895 |
| TscAI | CASTG | 2 cut(s) | 510, 581 |
| TseFI | GTSAC | 3 cut(s) | 143, 488, 859 |
| TseI | GCWGC | 3 cut(s) | 107, 497, 524 |
| Tsp45I | GTSAC | 3 cut(s) | 143, 488, 859 |
| TspDTI | ATGAA | 9 cut(s) | 963, 1041, 1164, 1261, 1376, 1377, 1445, 1535, 1755 |
| TspGWI | ACGGA | 1 cut(s) | 1098 |
| TspRI | CASTG | 2 cut(s) | 510, 581 |
| Tth111I | GACNNNGTC | 1 cut(s) | 404 |
| Vha464I | CTTAAG | 1 cut(s) | 617 |
| VneI | GTGCAC | 1 cut(s) | 577 |
| VpaK11BI | GGWCC | 3 cut(s) | 400, 1512, 1654 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 795 |
| XapI | RAATTY | 6 cut(s) | 113, 481, 508, 518, 672, 1139 |
| XceI | RCATGY | 2 cut(s) | 358, 536 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1049 |
| XmaJI | CCTAGG | 1 cut(s) | 1198 |
| XmnI | GAANNNNTTC | 1 cut(s) | 313 |
| XspI | CTAG | 5 cut(s) | 669, 1199, 1418, 1914, 1984 |
| Zsp2I | ATGCAT | 2 cut(s) | 887, 1757 |