RchiOBHm_Chr1g0319511

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
7115582 .. 7127827
12246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54975

Sequence Viewer

Length: 2010 bp
ATGGTTTTCTCAAGTTTTGGATTTGGAATTTTCCTTTCTGTACAACTTCTGGTACTCGTTATCATTGAAGCCGTTGATCTACACTTCGTTTGTTCAAACAACAGGGGTAACTACACCAACGGTAGTGTCTATCAGAAAAACCTCGACGACTTTCTCTCCTCCCTCGTCACTAATAAGAGCAGCAACGGCTATGGCTTCTACAAATCCTCTTTTGGCCAAGACGATGATGTCGTCGACAAGGTTCATGCCATCGGGCTTTGTAGACCGGATCTTATACCGGATGCTTCCCTCAGTACCTTCAACGACTCGGCATACAATCTCACAAGGGCTTGTCCAAATCAGAAGGAGGCAATCATATGGAATGGGTATTGCATGGTACGCTACTCCAACCGCTCCTTTCATCTTGAGCTTTCTCCTAGTTACAATCAATCGACCACGAGAAACCTATCGTCGTCGGATGTCGATTCATTCAATGTCGATTCATTCAATTCTGAGCTGGAGGGGTTAATCAGAGGAATGAAATATCAAGCAGCTGCAGGTGGTCTTCAGAAAAAGTTTGCAACGGAAAAGAGAAGGGTTATGTATTCCAACAATCAATCAATATTTGGTAAAGTACAGTGCATTCCGGACTTGTCGGAGGAAGAGTGCGGTGTCTGCTTGGATGAGGGTCTGAGACAGCTTCAGAAATGTTGTTATGGGATGGATTCTGCGACATTTGGTAATCCGAGCTGTAATTTGATGTATGAAGTTTTCACCTCCGATGATCCAGCTGAATATGGTGAACCACGAACACTATCTCATCCTACTCCGCCATCAGCTAAAAATTTAGGAGGAAATAAGAAGAGCAGCACATCTGCAGGGACCGTCATCATTATTGCTATGGCAACGGTTGTTTCCTTCTTGATTCTAATTATGTCCATCTGCATCTATCTGAGAGTGAAGTATAAAAGGAAAAGAATTGAAGAAAGAGCAGAAGAAATGAAATCTGCGGAAGCTTTGCAATTCGACTTTCGCTCCATTAGAGCTGCCACAAATAACTTTTCGGAAGCAAATAAACTTGGACGGGGAGGGTTTGGTATTGTTTACAGTGGTATACTTCCCGATGATAAGGACATAGCGGTTAAAAGGCTTTCGAGGGATTCTGCACAAGGAGATTTAGAATTCAAAACTGAGGTCTCGCTAGTGGCCAGGCTTCAACATAGGAATTTGGTTAGGCTTCTTGGTTTTTGCTTGGGAAAAAATGAAAAGATTCTTGTTTATGAGTTTGTCCCTAACGGAAGTCTTGATCAATTCATATTTGGTGAAGTCAAGCGCGCACATTTGGATTGGGATGTTCGCTACAAAATCATAGTAGGCATTGCGAGAGGGCTCCTTTACCTCCATGAAGATTCTCGTCTTAAAATCATTCACCGTGATCTCAAAGCTAGCAACATTCTATTAGATGCAGACATGAACCCCAAAATTGCAGATTTTGGTATGGCGAGATTGTTTGATCTTGATCAATCACAAGGCGAAACCAGACGAGTTGTGGGAACTTACGGATATATGGCTCCAGAGTATGTGATGCGTGGACAATTTTCGGTTAAGTCTGATGTCTTTAGCTTTGGTGTCTTAGTTTTGGAGATAGTAAGTGGACAAAAGAATAGTTCTTTTCGTAATAGAGGAAATGTGGAGGATCTTCTAAGCTATGCATGGAAAAATTGGAGAGCAGATACGGCTTCAAATATAATAGATCCCATCTTGAGTTCTGGTTCAAGAACTGAGATGATGAGATGCATCAACATTGGATTGTTATGTGTGCAACAAAATATAGCTGATAGGCCAACTATGACTTCAGTTATTCTCATGCTCACTGGCAACTCTCTCACTCTTCCAGTACCCTCACAGCCAGCATTTTTTATGGGTGCATCCGACTTTTCAAAGGTTGTAGAATTGGATCAAGCTCAAAGCAGCAGTTCTGTCCAAAAATCTGTTAATGAGGCTTCAATTACTGAACTATCACCTCGCTAA

Protein Analysis

669

Amino Acids

74.48

Weight (kDa)

6.73

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 31 - 131 4.3e-18 Salt stress response/antifungal
Stress-antifung PF01657 160 - 249 1.4e-07 Salt stress response/antifungal
Pkinase PF00069 348 - 612 1.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 350 - 614 4.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000086)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21230 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21400 AT4G21410 AT4G21410 AT4G21410 AT4G38830
fragaria_vesca FvH4_2g29861 FvH4_2g29861 FvH4_2g29870 FvH4_2g29870 FvH4_2g29870 FvH4_2g29871 FvH4_2g29871 FvH4_2g29875 FvH4_2g29878 FvH4_3g02833 FvH4_3g02833 FvH4_3g02834 FvH4_3g02870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g19870 FvH4_3g20010
malus_domestica MD00G1101400.v1.1 MD00G1101700.v1.1 MD01G1027900.v1.1 MD02G1101400.v1.1 MD05G1336800.v1.1 MD05G1337000.v1.1 MD05G1337300.v1.1 MD05G1337400.v1.1 MD05G1337500.v1.1 MD07G1014000.v1.1 MD08G1139800.v1.1 MD08G1139900.v1.1 MD08G1140000.v1.1 MD08G1140100.v1.1 MD08G1140200.v1.1 MD08G1140400.v1.1 MD10G1312200.v1.1 MD10G1312500.v1.1 MD15G1117400.v1.1
prunus_persica Prupe.1G174500_v2.0.a1 Prupe.1G468600_v2.0.a1 Prupe.1G469000_v2.0.a1 Prupe.1G469100_v2.0.a1 Prupe.1G469200_v2.0.a1 Prupe.1G469300_v2.0.a1 Prupe.4G027900_v2.0.a1 Prupe.4G028000_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028100_v2.0.a1 Prupe.4G028200_v2.0.a1 Prupe.4G028600_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028700_v2.0.a1 Prupe.4G028800_v2.0.a1 Prupe.4G100700_v2.0.a1 Prupe.6G183400_v2.0.a1 Prupe.6G183500_v2.0.a1 Prupe.6G183600_v2.0.a1 Prupe.6G184100_v2.0.a1 Prupe.6G184400_v2.0.a1 Prupe.6G184500_v2.0.a1
pyrus_communis pycom01g05620 pycom01g05630 pycom05g30820 pycom05g30840 pycom05g30860 pycom05g30880 pycom05g30890 pycom05g30900 pycom08g11780 pycom08g11850 pycom10g26340 pycom10g26350 pycom10g26360 pycom10g26400 pycom10g26410 pycom15g10580
rosa_chinensis RchiOBHm_Chr1g0313011 RchiOBHm_Chr1g0319461 RchiOBHm_Chr1g0319511 RchiOBHm_Chr2g0114611 RchiOBHm_Chr2g0114631 RchiOBHm_Chr2g0114691 RchiOBHm_Chr2g0114741 RchiOBHm_Chr2g0114751 RchiOBHm_Chr2g0114781 RchiOBHm_Chr2g0114791 RchiOBHm_Chr3g0494511 RchiOBHm_Chr3g0494521 RchiOBHm_Chr4g0413731 RchiOBHm_Chr5g0004271 RchiOBHm_Chr5g0004291 RchiOBHm_Chr5g0004301 RchiOBHm_Chr5g0004341 RchiOBHm_Chr5g0004351 RchiOBHm_Chr5g0004371 RchiOBHm_Chr5g0033301 RchiOBHm_Chr5g0033311 RchiOBHm_Chr5g0033341 RchiOBHm_Chr5g0033361 RchiOBHm_Chr5g0033391 RchiOBHm_Chr5g0033401 RchiOBHm_Chr5g0033431 RchiOBHm_Chr5g0033451 RchiOBHm_Chr5g0033461 RchiOBHm_Chr5g0033531 RchiOBHm_Chr5g0033541 RchiOBHm_Chr5g0033711 RchiOBHm_Chr5g0033851 RchiOBHm_Chr5g0033861 RchiOBHm_Chr5g0033871 RchiOBHm_Chr5g0054051 RchiOBHm_Chr5g0069631 RchiOBHm_Chr6g0265231 RchiOBHm_Chr6g0298941 RchiOBHm_Chr6g0298951 RchiOBHm_Chr6g0299001 RchiOBHm_Chr6g0299011 RchiOBHm_Chr6g0299021
rosa_laevigata RLG00000008198 RLG00000010335 RLG00000011468 RLG00000011471 RLG00000014070 RLG00000014071 RLG00000018116 RLG00000018125 RLG00000031219 RLG00000031220 RLG00000031221 RLG00000031222 RLG00000031224 RLG00000033469 RLG00000033471 RLG00000033473 RLG00000033476 RLG00000033477 RLG00000033479 RLG00000033480 RLG00000033483 RLG00000035638
rosa_multiflora Rmu_co8063382.1_g000001 Rmu_co8095246.1_g000001 Rmu_sc0000370.1_g000009 Rmu_sc0000370.1_g000019 Rmu_sc0000371.1_g000023 Rmu_sc0000371.1_g000036 Rmu_sc0000433.1_g000023 Rmu_sc0000433.1_g000024 Rmu_sc0000545.1_g000004 Rmu_sc0000981.1_g000001 Rmu_sc0001150.1_g000032 Rmu_sc0001242.1_g000004 Rmu_sc0001242.1_g000008 Rmu_sc0001522.1_g000035 Rmu_sc0002206.1_g000008 Rmu_sc0002206.1_g000021 Rmu_sc0002453.1_g000008 Rmu_sc0002453.1_g000018 Rmu_sc0003286.1_g000007 Rmu_sc0003286.1_g000013 Rmu_sc0004133.1_g000005 Rmu_sc0005660.1_g000005 Rmu_sc0005660.1_g000019 Rmu_sc0005660.1_g000025 Rmu_sc0005870.1_g000017 Rmu_sc0005870.1_g000022 Rmu_sc0006083.1_g000003 Rmu_sc0008092.1_g000016 Rmu_sc0008210.1_g000007 Rmu_sc0009715.1_g000001 Rmu_sc0011893.1_g000003 Rmu_sc0011893.1_g000004 Rmu_sc0015325.1_g000002 Rmu_sc0029922.1_g000001 Rmu_ssc0000359.1_g000017 Rmu_ssc0000424.1_g000009
rosa_roxburghii Rroxscaffold_175G00432170 Rroxscaffold_1G00022110 Rroxscaffold_1G00046520 Rroxscaffold_1G00046550 Rroxscaffold_1G00046600 Rroxscaffold_1G00046650 Rroxscaffold_1G00046680 Rroxscaffold_1G00071130 Rroxscaffold_1G00071380 Rroxscaffold_1G00071410 Rroxscaffold_2G00130310 Rroxscaffold_2G00130320 Rroxscaffold_2G00130330 Rroxscaffold_4G00328340 Rroxscaffold_4G00328360 Rroxscaffold_4G00328370 Rroxscaffold_5G00357650 Rroxscaffold_7G00156890 Rroxscaffold_7G00169080 Rroxscaffold_7G00169090 Rroxscaffold_7G00169100 Rroxscaffold_7G00169170 Rroxscaffold_7G00169190
rosa_rugosa Rorug01G0027900 Rorug01G0130600 Rorug02G0190700 Rorug04G0411000 Rorug04G0411000 Rorug04G0411200 Rorug04G0411300 Rorug04G0411400 Rorug04G0411500 Rorug05G0139300 Rorug05G0139500 Rorug05G0139800 Rorug05G0139900 Rorug05G0187000 Rorug05G0187000 Rorug05G0187000 Rorug05G0398900 Rorug06G0034600 Rorug06G0283900 Rorug06G0284000 Rorug06G0284100 Rorug06G0394700
rosa_samantha Rh1BG036800 Rh1CG040700 Rh1CG040800 Rh1DG000200 Rh1DG028900 Rh1DG090600 Rh2AG248900 Rh2CG252600 Rh2CG253100 Rh2CG253500 Rh2CG253600 Rh2CG253900 Rh4DG177700 Rh5CG041500 Rh5CG041700 Rh5CG042100 Rh5CG260400 Rh5CG260500 Rh5CG260600 Rh5CG260900 Rh5CG261100 Rh5DG037300 Rh5DG037400 Rh5DG037500 Rh5DG236800 Rh5DG236900 Rh5DG237100 Rh5DG237500 Rh5DG237600 Rh5DG237700 Rh5DG241100 Rh6CG134500 Rh6CG409700 Rh6CG409800 Rh6CG410100 Rh6DG120900 Rh6DG396500 Rh6DG396600 Rh6DG396700 Rh6DG514400
rosa_wichuraiana Rw1G003200 Rw1G003210 Rw1G003230 Rw2G019350 Rw4G015240 Rw5G003500 Rw5G003520 Rw5G003530 Rw5G003690 Rw5G003720 Rw5G003730 Rw5G021090 Rw5G021100 Rw5G021110 Rw5G021120 Rw5G021130 Rw6G011870 Rw6G034630 Rw7G038700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 527
AasI GACNNNNNNGTC 1 cut(s) 227
Acc36I ACCTGC 1 cut(s) 527
AccBSI CCGCTC 1 cut(s) 393
AccI GTMKAC 3 cut(s) 234, 262, 1093
AccII CGCG 1 cut(s) 1314
AccIII TCCGGA 1 cut(s) 625
AciI CCGC 5 cut(s) 391, 648, 809, 989, 1118
AclWI GGATC 5 cut(s) 276, 758, 1683, 1727, 1944
AcoI YGGCCR 2 cut(s) 214, 1185
AcsI RAATTY 4 cut(s) 27, 823, 1160, 1204
AcuI CTGAAG 3 cut(s) 530, 665, 1818
AfaI GTAC 6 cut(s) 42, 54, 295, 378, 615, 1878
AjnI CCWGG 1 cut(s) 1187
AjuI GAANNNNNNNTTGG 2 cut(s) 1816, 1848
Alw26I GTCTC 2 cut(s) 667, 1180
AlwI GGATC 5 cut(s) 276, 758, 1683, 1727, 1944
Aor13HI TCCGGA 1 cut(s) 625
AoxI GGCC 3 cut(s) 214, 1185, 1820
ApeKI GCWGC 6 cut(s) 180, 530, 533, 846, 1025, 1950
ApoI RAATTY 4 cut(s) 27, 823, 1160, 1204
ArsI GACNNNNNNTTYG 2 cut(s) 1158, 1190
Asp700I GAANNNNTTC 1 cut(s) 1248
AspLEI GCGC 2 cut(s) 1314, 1316
AspS9I GGNCC 1 cut(s) 861
AsuHPI GGTGA 5 cut(s) 745, 791, 1313, 1400, 1992
AsuNHI GCTAGC 1 cut(s) 1424
AvaII GGWCC 1 cut(s) 861
BalI TGGCCA 2 cut(s) 216, 1187
BanII GRGCYC 1 cut(s) 1371
BauI CACGAG 1 cut(s) 436
BbsI GAAGAC 1 cut(s) 536
BbvI GCAGC 6 cut(s) 192, 520, 542, 858, 1012, 1962
BccI CCATC 5 cut(s) 257, 694, 820, 926, 1745
BceAI ACGGC 3 cut(s) 56, 202, 1731
BciT130I CCWGG 1 cut(s) 1189
BclI TGATCA 2 cut(s) 1285, 1498
BcoDI GTCTC 2 cut(s) 667, 1180
BfaI CTAG 3 cut(s) 417, 1181, 1425
BfmI CTRYAG 2 cut(s) 534, 855
BfuAI ACCTGC 1 cut(s) 527
BisI GCNGC 6 cut(s) 181, 531, 534, 847, 1026, 1951
BlsI GCNGC 6 cut(s) 182, 532, 535, 848, 1027, 1952
Bme1390I CCNGG 1 cut(s) 1189
Bme18I GGWCC 1 cut(s) 861
BmgT120I GGNCC 1 cut(s) 861
BmiI GGNNCC 3 cut(s) 862, 1370, 1551
BmrFI CCNGG 1 cut(s) 1189
BmsI GCATC 7 cut(s) 271, 933, 1432, 1554, 1763, 1785, 1916
BmtI GCTAGC 1 cut(s) 1428
BpiI GAAGAC 1 cut(s) 536
BpmI CTGGAG 2 cut(s) 518, 1536
BpuEI CTTGAG 2 cut(s) 425, 1762
BsaBI GATNNNNATC 1 cut(s) 1497
BsaI GGTCTC 1 cut(s) 1180
BsaWI WCCGGW 3 cut(s) 265, 277, 625
BsaXI ACNNNNNCTCC 6 cut(s) 140, 170, 629, 659, 998, 1028
Bse1I ACTGG 2 cut(s) 1858, 1874
Bse3DI GCAATG 1 cut(s) 1356
Bse8I GATNNNNATC 1 cut(s) 1497
BseAI TCCGGA 1 cut(s) 625
BseBI CCWGG 1 cut(s) 1189
BseGI GGATG 7 cut(s) 286, 463, 667, 705, 799, 1336, 1907
BseJI GATNNNNATC 1 cut(s) 1497
BseMI GCAATG 1 cut(s) 1356
BseMII CTCAG 6 cut(s) 304, 483, 662, 923, 1161, 1752
BseNI ACTGG 2 cut(s) 1858, 1874
BsePI GCGCGC 1 cut(s) 1312
BseRI GAGGAG 1 cut(s) 148
BseXI GCAGC 6 cut(s) 192, 520, 542, 858, 1012, 1962
BsgI GTGCAG 1 cut(s) 1128
Bsh1236I CGCG 1 cut(s) 1314
BshFI GGCC 3 cut(s) 216, 1187, 1822
BsiSI CCGG 3 cut(s) 266, 278, 626
BslFI GGGAC 2 cut(s) 874, 1253
BsmAI GTCTC 2 cut(s) 667, 1180
BsmFI GGGAC 2 cut(s) 874, 1253
BsmI GAATGC 1 cut(s) 621
BsnI GGCC 3 cut(s) 216, 1187, 1822
Bso31I GGTCTC 1 cut(s) 1180
Bsp1286I GDGCHC 1 cut(s) 1371
Bsp13I TCCGGA 1 cut(s) 625
Bsp1407I TGTACA 1 cut(s) 40
BspACI CCGC 5 cut(s) 391, 648, 809, 989, 1118
BspANI GGCC 3 cut(s) 216, 1187, 1822
BspCNI CTCAG 6 cut(s) 303, 484, 663, 924, 1162, 1753
BspEI TCCGGA 1 cut(s) 625
BspFNI CGCG 1 cut(s) 1314
BspLI GGNNCC 3 cut(s) 862, 1370, 1551
BspMAI CTGCAG 2 cut(s) 538, 859
BspMI ACCTGC 1 cut(s) 527
BspOI GCTAGC 1 cut(s) 1428
BspPI GGATC 5 cut(s) 276, 758, 1683, 1727, 1944
BspQI GCTCTTC 1 cut(s) 836
BspTNI GGTCTC 1 cut(s) 1180
BsrBI CCGCTC 1 cut(s) 393
BsrDI GCAATG 1 cut(s) 1356
BsrGI TGTACA 1 cut(s) 40
BsrI ACTGG 2 cut(s) 1858, 1874
BssHII GCGCGC 1 cut(s) 1312
BssNAI GTATAC 1 cut(s) 1094
BssSI CACGAG 1 cut(s) 436
Bst1107I GTATAC 1 cut(s) 1094
Bst2BI CACGAG 1 cut(s) 436
Bst2UI CCWGG 1 cut(s) 1189
Bst4CI ACNGT 6 cut(s) 122, 618, 865, 889, 1088, 1412
Bst6I CTCTTC 3 cut(s) 636, 836, 1875
BstAUI TGTACA 1 cut(s) 40
BstC8I GCNNGC 3 cut(s) 1314, 1426, 1890
BstDEI CTNAG 8 cut(s) 290, 492, 671, 932, 1170, 1612, 1682, 1761
BstF5I GGATG 7 cut(s) 286, 463, 667, 705, 799, 1336, 1907
BstFNI CGCG 1 cut(s) 1314
BstHHI GCGC 2 cut(s) 1314, 1316
BstMAI GTCTC 2 cut(s) 667, 1180
BstMWI GCNNNNNNNGC 4 cut(s) 186, 378, 654, 1715
BstNI CCWGG 1 cut(s) 1189
BstSCI CCNGG 1 cut(s) 1187
BstSFI CTRYAG 2 cut(s) 534, 855
BstUI CGCG 1 cut(s) 1314
BstV1I GCAGC 6 cut(s) 192, 520, 542, 858, 1012, 1962
BstV2I GAAGAC 1 cut(s) 536
BstX2I RGATCY 3 cut(s) 268, 1675, 1732
BstYI RGATCY 3 cut(s) 268, 1675, 1732
BstZ17I GTATAC 1 cut(s) 1094
BsuRI GGCC 3 cut(s) 216, 1187, 1822
BtsCI GGATG 7 cut(s) 286, 463, 667, 705, 799, 1336, 1907
BtsIMutI CAGTG 3 cut(s) 623, 1093, 1851
BveI ACCTGC 1 cut(s) 527
Cac8I GCNNGC 3 cut(s) 1314, 1426, 1890
CfoI GCGC 2 cut(s) 1314, 1316
Cfr13I GGNCC 1 cut(s) 861
Csp6I GTAC 6 cut(s) 41, 53, 294, 377, 614, 1877
CviAII CATG 6 cut(s) 245, 373, 1382, 1450, 1692, 1846
CviQI GTAC 6 cut(s) 41, 53, 294, 377, 614, 1877
DdeI CTNAG 8 cut(s) 290, 492, 671, 932, 1170, 1612, 1682, 1761
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 2 cut(s) 214, 1185
Eam1104I CTCTTC 3 cut(s) 636, 836, 1875
EarI CTCTTC 3 cut(s) 636, 836, 1875
EciI GGCGGA 1 cut(s) 798
Eco24I GRGCYC 1 cut(s) 1371
Eco31I GGTCTC 1 cut(s) 1180
Eco47I GGWCC 1 cut(s) 861
Eco57I CTGAAG 3 cut(s) 530, 665, 1818
EcoRI GAATTC 1 cut(s) 1160
EcoRII CCWGG 1 cut(s) 1187
EcoT22I ATGCAT 2 cut(s) 1693, 1778
EcoT38I GRGCYC 1 cut(s) 1371
FaeI CATG 6 cut(s) 248, 376, 1385, 1453, 1695, 1849
FaqI GGGAC 2 cut(s) 874, 1253
FatI CATG 6 cut(s) 244, 372, 1381, 1449, 1691, 1845
FauNDI CATATG 1 cut(s) 356
FbaI TGATCA 2 cut(s) 1285, 1498
FblI GTMKAC 3 cut(s) 234, 262, 1093
Fnu4HI GCNGC 6 cut(s) 181, 531, 534, 847, 1026, 1951
FokI GGATG 7 cut(s) 293, 470, 674, 712, 786, 1343, 1894
FriOI GRGCYC 1 cut(s) 1371
Fsp4HI GCNGC 6 cut(s) 181, 531, 534, 847, 1026, 1951
FspBI CTAG 3 cut(s) 417, 1181, 1425
GlaI GCGC 2 cut(s) 1313, 1315
GluI GCNGC 6 cut(s) 181, 531, 534, 847, 1026, 1951
GsuI CTGGAG 2 cut(s) 518, 1536
HaeIII GGCC 3 cut(s) 216, 1187, 1822
HapII CCGG 3 cut(s) 266, 278, 626
HhaI GCGC 2 cut(s) 1314, 1316
Hin1II CATG 6 cut(s) 248, 376, 1385, 1453, 1695, 1849
Hin6I GCGC 2 cut(s) 1312, 1314
HinP1I GCGC 2 cut(s) 1312, 1314
HincII GTYRAC 1 cut(s) 235
HindII GTYRAC 1 cut(s) 235
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 8 cut(s) 305, 464, 479, 704, 904, 1139, 1249, 1388
HpaII CCGG 3 cut(s) 266, 278, 626
HphI GGTGA 5 cut(s) 745, 791, 1313, 1400, 1992
Hpy166II GTNNAC 7 cut(s) 235, 263, 782, 1084, 1094, 1571, 1634
Hpy188III TCNNGA 9 cut(s) 404, 626, 901, 1100, 1283, 1496, 1553, 1741, 1755
Hpy8I GTNNAC 7 cut(s) 235, 263, 782, 1084, 1094, 1571, 1634
Hpy99I CGWCG 4 cut(s) 149, 236, 454, 457
HpyAV CCTTC 4 cut(s) 307, 337, 567, 907
HpyCH4III ACNGT 6 cut(s) 122, 618, 865, 889, 1088, 1412
HpyF10VI GCNNNNNNNGC 4 cut(s) 186, 378, 654, 1715
HpyF3I CTNAG 8 cut(s) 290, 492, 671, 932, 1170, 1612, 1682, 1761
Hsp92II CATG 6 cut(s) 248, 376, 1385, 1453, 1695, 1849
HspAI GCGC 2 cut(s) 1312, 1314
Kpn2I TCCGGA 1 cut(s) 625
Ksp22I TGATCA 2 cut(s) 1285, 1498
LguI GCTCTTC 1 cut(s) 836
LmnI GCTCC 4 cut(s) 398, 1019, 1374, 1555
Lsp1109I GCAGC 6 cut(s) 192, 520, 542, 858, 1012, 1962
LweI GCATC 7 cut(s) 271, 933, 1432, 1554, 1763, 1785, 1916
MaeI CTAG 3 cut(s) 417, 1181, 1425
MaeIII GTNAC 3 cut(s) 107, 166, 419
MbiI CCGCTC 1 cut(s) 393
MboII GAAGA 8 cut(s) 536, 653, 853, 974, 986, 1397, 1670, 1862
MflI RGATCY 3 cut(s) 268, 1675, 1732
MhlI GDGCHC 1 cut(s) 1371
MlsI TGGCCA 2 cut(s) 216, 1187
MluNI TGGCCA 2 cut(s) 216, 1187
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 5 cut(s) 411, 435, 612, 615, 1935
Mox20I TGGCCA 2 cut(s) 216, 1187
Mph1103I ATGCAT 2 cut(s) 1693, 1778
MroI TCCGGA 1 cut(s) 625
MroXI GAANNNNTTC 1 cut(s) 1248
MscI TGGCCA 2 cut(s) 216, 1187
MseI TTAA 5 cut(s) 506, 1122, 1398, 1584, 1974
Msp20I TGGCCA 2 cut(s) 216, 1187
MspA1I CMGCKG 2 cut(s) 533, 770
MspI CCGG 3 cut(s) 266, 278, 626
MspR9I CCNGG 1 cut(s) 1189
Mva1269I GAATGC 1 cut(s) 621
MvaI CCWGG 1 cut(s) 1189
MvnI CGCG 1 cut(s) 1314
MwoI GCNNNNNNNGC 4 cut(s) 186, 378, 654, 1715
NdeI CATATG 1 cut(s) 356
NheI GCTAGC 1 cut(s) 1424
NlaIII CATG 6 cut(s) 248, 376, 1385, 1453, 1695, 1849
NlaIV GGNNCC 3 cut(s) 862, 1370, 1551
NmeAIII GCCGAG 1 cut(s) 287
NmuCI GTSAC 1 cut(s) 166
NsiI ATGCAT 2 cut(s) 1693, 1778
PaqCI CACCTGC 1 cut(s) 527
PauI GCGCGC 1 cut(s) 1312
PciSI GCTCTTC 1 cut(s) 836
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 621
PdmI GAANNNNTTC 1 cut(s) 1248
PfeI GAWTC 7 cut(s) 464, 479, 704, 904, 1139, 1249, 1388
PkrI GCNGC 6 cut(s) 182, 532, 535, 848, 1027, 1952
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
Psp6I CCWGG 1 cut(s) 1187
PspGI CCWGG 1 cut(s) 1187
PspN4I GGNNCC 3 cut(s) 862, 1370, 1551
PspPI GGNCC 1 cut(s) 861
PstI CTGCAG 2 cut(s) 538, 859
PsuI RGATCY 3 cut(s) 268, 1675, 1732
PteI GCGCGC 1 cut(s) 1312
PvuII CAGCTG 2 cut(s) 533, 770
RsaI GTAC 6 cut(s) 42, 54, 295, 378, 615, 1878
RsaNI GTAC 6 cut(s) 41, 53, 294, 377, 614, 1877
SalI GTCGAC 1 cut(s) 233
SapI GCTCTTC 1 cut(s) 836
SaqAI TTAA 5 cut(s) 506, 1122, 1398, 1584, 1974
SatI GCNGC 6 cut(s) 181, 531, 534, 847, 1026, 1951
Sau96I GGNCC 1 cut(s) 861
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 1 cut(s) 1189
SduI GDGCHC 1 cut(s) 1371
SfaNI GCATC 7 cut(s) 271, 933, 1432, 1554, 1763, 1785, 1916
SfcI CTRYAG 2 cut(s) 534, 855
SinI GGWCC 1 cut(s) 861
SmlI CTYRAG 3 cut(s) 10, 404, 1741
SmoI CTYRAG 3 cut(s) 10, 404, 1741
SsiI CCGC 5 cut(s) 391, 648, 809, 989, 1118
SspI AATATT 1 cut(s) 603
SspMI CTAG 3 cut(s) 417, 1181, 1425
StyD4I CCNGG 1 cut(s) 1187
TaaI ACNGT 6 cut(s) 122, 618, 865, 889, 1088, 1412
TaqI TCGA 7 cut(s) 144, 234, 431, 462, 477, 1005, 1133
TatI WGTACW 2 cut(s) 40, 613
TfiI GAWTC 7 cut(s) 464, 479, 704, 904, 1139, 1249, 1388
Tru1I TTAA 5 cut(s) 506, 1122, 1398, 1584, 1974
Tru9I TTAA 5 cut(s) 506, 1122, 1398, 1584, 1974
TscAI CASTG 3 cut(s) 623, 1093, 1858
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 6 cut(s) 180, 530, 533, 846, 1025, 1950
Tsp45I GTSAC 1 cut(s) 166
TspGWI ACGGA 3 cut(s) 578, 1290, 1554
TspRI CASTG 3 cut(s) 623, 1093, 1858
VpaK11BI GGWCC 1 cut(s) 861
XapI RAATTY 4 cut(s) 27, 823, 1160, 1204
XcmI CCANNNNNNNNNTGG 1 cut(s) 1525
XmiI GTMKAC 3 cut(s) 234, 262, 1093
XmnI GAANNNNTTC 1 cut(s) 1248
XspI CTAG 3 cut(s) 417, 1181, 1425
Zsp2I ATGCAT 2 cut(s) 1693, 1778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.