FvH4_6g11683

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
7004454 .. 7007246
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g11683.t1

Sequence Viewer

Length: 2793 bp
ATGAAGCAATCACCTACTCAAGGTAGGCGAACTCTGTTTAAACTTCAAGTGTTCATTCTTGTTTGCATGAGCACAGTTCTGGAATCTGCATCACTGCGCAGTTTCGAAAATGAAACCGATCTCCTGGCATTACTAGACTTCAAGAGAAGTATTACTAAAGATCCTCACCATATCATGAGCTCATGGAATAAGTCCATCCATTTCTGCAGTTGGGTAGGCGTTACATGCAACCCTTCCAACAATCGAGTCATCATTCTGAACCTGGAGGCCCAAGAACTGGAAGGCTCCATAGCACCTTCAATAGGAAACCTTACCTATCTTACTCAACTCAACCTCACAGACAACAAATTTCATGGTGAAATTCCTCAGGAATTGGGCCGTCTACTGCACTTGCAACAGCTGAACCTGATGGCCAATTCCTTGCGGGGGAACATTCCAGCGAATATATCTCACTGTTCTCGACTCAGAGTCCTCGACCTCGGGATCAATGGACTTATTGGGCCAGTTCCAGACCAACTCAGTTCATTGTTGGAGTTAACTCATCTATGGCTTGATACAAACAGTCTCACAGGCAGTGTCCCAGCTTGGTTAGGAAACTTTTCTTCTTTGTATGCATTTTCTTTTGGCGAGAACAATCTCCAAGGAAGCATACCCAGTGAGCTAGGGGGTCTAACAAGTTTGAGAAAATTTGTACTTGCGAGTAATAATCTTTCTGGTACAGTTCCTTCTTCAATCTACAATATTTCCTCATTATACTACTTCACTATCGCTAACAACCACCTGCATGGAGAGTTGCCACCAAACATTGGCATAACTCTTCCTAATCTTGAAGTTTTTGCTGGTGGTATCAACAAATTCACAGGAAATATTCCTGTATCATTGTCAAATGCTTCTAGACTCTGGCTCCTTGATTTTGCTGAAAATGGTCTTACCGGAGAGTTCCCTGCTGAGTATTTTGGAAGCTTGGTGAGGTTAGTGAAAATAAACTTCGATGACAACTCACTGGGAACTGGGAAAACTAGTGACTTGAATTTTCTCACTTTCCTGGCTAATTGTACTAGGCTTGAGGTGTTATGTTTTATCAATAATCGTTTTGGAGGAGAATTACCAGAATCCATAGGAAACCTTTCCACCAAACTGAGACAGCTTTGTCTGTCAGGCAATTTGATACATGGAAGCATCCCTATTGGCATTGGAAATCTTGTAAACTTGACCAAGCTGGAACTGGGAGACAATAATTTGGGTGGTAGTCTCCCTGAAGAAATTGGGAAGCTTCAGAAGTTAGAGGGACTGCTTTTGAATCTAAACAAACTTTCTGGACCAATCCCGTCCTCCTTAGGAAACTTGACGTCACTAACAAAGCTCTTCATGCAGGGGAATAGGTTTGAGGGAAGTATACCGCCAAGTCTTGGAAGCTGCAAAAATCTACTAGTACTAAACCTTTCCACTAACAGTCTAAATGGCCCGATACCTAAAGAGTTAGTTGAGGATTCATCCCTTTCAATTTCATTGACCCTTTCTAACAATTACTTGACTGGTTCACTCCCAGATGAGGTGGGTAAGCTGGTACAACTTGCAGAGCTAGATGTATCAGGCAACAAGTTATCAGGTGAAATCCCTGAAACCCTTGGCAGTTGTCTTAGTTTGGAGCGCCTGCATTTGGAAGATAATGAACTTGAAGGAACAATTCCAAATTCTATTAAAGATTTAAGAGGATTGGAGGAAATTGATGTTTCACAGAATCACTTATTTGGCAAGGTTCCTGAATTCTTTGTCCATCTTAGAACTCTTAAGCATCTCAATCTTTCTTACAACCATCTTGAAGGAGAATTGCCTAAGGAAGGGATCTTTTCAAATGCAACTGGTGTATCAGTTCTCGGAAATGATAAACTCTGTGGTGGCATCCCAGAATTACTTCTACCTGCATGCTCCAGCAGAAAGCCTCAATCATCTCTAGGACTACTTGCTGCAGAAGTGATAATCCCTCTAAGTTGTGGAATTGCATTAACAATTTCTCTTTGTTTCTTCATTGCTGGATGTTCAATGGCGAAAAGGTCAAGAGATAGATCCCTGACATCACGTACTTATGAGGATTGGAAATCAGGTGTCTCTTACAGAGAACTAGTTCAATCAACTGACGGGTTCTCTATAAATAATCTGATTGGTTCAGGAAGTTTCGGTTCAGTATACAAAGGATTAATCAGTGGTGATGGAACTGCTGTTGCTGTTAAGGTATTTAACCTTCAACAACATGGAGCATCGAAGAGTTTCATTGATGAATGCAAAGCATTGAGAAGTATAAGGCACCGGAATCTTCTTAAGATCATAACTGCCTGCTCAAGCATTGATAATCAGGGAAATGACTTTAAAAGTCTAGTTTTCGAGTTCATGGAAAATGGAAGCCTAGACTCTTGGCTGCATCCCAGTGAGGATGATCAATCTCAAAGGAAGAGACTGAGCCTCATCCAGAGACTGAATATTGCCATTGATGTTGCTTCTGCAATAAATCATCTCCACCACTATTGTGAACCATCAATTGTTCATTGTGATTTAAAGCCGAGCAATGTTCTTCTCGATGAAGATATGGTAGCACATGTTGGTGACTTTGGTTTAGCAAGCTTCCTCTTGGAAGCATTGGATGATCCCTCTGAGATCCAAAGCATATCAGATGGACTAAAGGGTTCCATAGGCTACATTCCTCCAGGTATGACACCTGATCATTCAGATTCTCTTCTATTACTGACAACGTACTTGTTGATAAAAATGATAACTCTATTTTATCCTGGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

931

Amino Acids

101.26

Weight (kDa)

5.62

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 77 2.7e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 233 6.2e-10 Leucine-rich repeat region
LRR_14 PF23598 347 - 496 5.8e-10 Leucine-rich repeat region
LRR_14 PF23598 466 - 601 2.5e-09 Leucine-rich repeat region
LRR_8 PF13855 548 - 607 3.2e-09 Leucine rich repeat
Pkinase PF00069 716 - 901 8.9e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 717 - 875 1.8e-27 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 789
AasI GACNNNNNNGTC 1 cut(s) 1149
AatII GACGTC 1 cut(s) 1352
Acc16I TGCGCA 1 cut(s) 98
Acc36I ACCTGC 2 cut(s) 789, 1930
AccB1I GGYRCC 1 cut(s) 2304
AccB7I CCANNNNNTGG 3 cut(s) 277, 806, 1409
AccI GTMKAC 3 cut(s) 382, 1396, 2187
AciI CCGC 2 cut(s) 424, 1400
AclWI GGATC 6 cut(s) 155, 491, 1853, 2061, 2636, 2647
AcoI YGGCCR 1 cut(s) 411
AcsI RAATTY 7 cut(s) 347, 360, 686, 854, 1030, 1693, 1766
AcuI CTGAAG 2 cut(s) 1259, 1278
AcyI GRCGYC 1 cut(s) 1349
AfaI GTAC 7 cut(s) 693, 718, 1057, 1434, 1569, 2083, 2750
AfiI CCNNNNNNNGG 9 cut(s) 20, 277, 302, 426, 806, 1409, 1552, 1660, 1841
AflII CTTAAG 2 cut(s) 1790, 2318
AflIII ACRYGT 1 cut(s) 2593
AhdI GACNNNNNGTC 1 cut(s) 467
AhlI ACTAGT 3 cut(s) 1019, 1429, 2122
AjnI CCWGG 5 cut(s) 123, 261, 1044, 2701, 2782
AleI CACNNNNGTG 1 cut(s) 2523
Alw21I GWGCWC 2 cut(s) 74, 182
Alw26I GTCTC 7 cut(s) 569, 1135, 1224, 1256, 2113, 2446, 2464
AlwI GGATC 6 cut(s) 155, 491, 1853, 2061, 2636, 2647
AlwNI CAGNNNCTG 1 cut(s) 2473
Ama87I CYCGRG 1 cut(s) 479
AoxI GGCC 5 cut(s) 267, 376, 411, 500, 1462
ApeKI GCWGC 3 cut(s) 1416, 1967, 2416
ApoI RAATTY 7 cut(s) 347, 360, 686, 854, 1030, 1693, 1766
AseI ATTAAT 1 cut(s) 2198
Asp700I GAANNNNTTC 5 cut(s) 598, 1126, 1914, 2124, 2267
AspLEI GCGC 2 cut(s) 99, 1653
AspS9I GGNCC 5 cut(s) 268, 376, 500, 1319, 1463
AsuHPI GGTGA 7 cut(s) 3, 158, 368, 979, 1622, 2219, 2612
AsuII TTCGAA 1 cut(s) 105
AvaI CYCGRG 1 cut(s) 479
AvaII GGWCC 1 cut(s) 1319
AxyI CCTNAGG 3 cut(s) 366, 1336, 1836
BaeI ACNNNNGTAYC 2 cut(s) 1851, 1884
BalI TGGCCA 1 cut(s) 413
BanI GGYRCC 1 cut(s) 2304
BanII GRGCYC 1 cut(s) 182
BarI GAAGNNNNNNTAC 4 cut(s) 709, 741, 2226, 2258
Bbv12I GWGCWC 2 cut(s) 74, 182
BbvI GCAGC 3 cut(s) 1403, 1954, 2403
BccI CCATC 7 cut(s) 203, 403, 1785, 1824, 2204, 2539, 2663
BceAI ACGGC 1 cut(s) 363
BciT130I CCWGG 5 cut(s) 125, 263, 1046, 2703, 2784
BclI TGATCA 2 cut(s) 2434, 2716
BcoDI GTCTC 7 cut(s) 569, 1135, 1224, 1256, 2113, 2446, 2464
BcuI ACTAGT 3 cut(s) 1019, 1429, 2122
BfmI CTRYAG 2 cut(s) 205, 1968
BfoI RGCGCY 1 cut(s) 1654
BfrI CTTAAG 2 cut(s) 1790, 2318
BfuAI ACCTGC 2 cut(s) 789, 1930
BisI GCNGC 3 cut(s) 1417, 1968, 2417
BlsI GCNGC 3 cut(s) 1418, 1969, 2418
BmcAI AGTACT 1 cut(s) 1434
Bme1390I CCNGG 5 cut(s) 125, 263, 1046, 2703, 2784
Bme18I GGWCC 1 cut(s) 1319
BmeRI GACNNNNNGTC 1 cut(s) 467
BmeT110I CYCGRG 1 cut(s) 479
BmgT120I GGNCC 5 cut(s) 268, 376, 500, 1319, 1463
BmiI GGNNCC 5 cut(s) 286, 905, 1761, 2306, 2683
BmrFI CCNGG 5 cut(s) 125, 263, 1046, 2703, 2784
BmrI ACTGGG 5 cut(s) 648, 1013, 1020, 1235, 2418
BmsI GCATC 6 cut(s) 98, 1188, 1804, 1911, 2267, 2428
BmuI ACTGGG 5 cut(s) 648, 1013, 1020, 1235, 2418
BpmI CTGGAG 3 cut(s) 284, 1915, 2685
Bpu14I TTCGAA 1 cut(s) 105
BpuEI CTTGAG 2 cut(s) 1085, 2323
BsaAI YACGTR 1 cut(s) 2081
BsaHI GRCGYC 1 cut(s) 1349
BsaJI CCNNGG 3 cut(s) 478, 640, 1627
BsaWI WCCGGW 2 cut(s) 932, 2307
BsaXI ACNNNNNCTCC 2 cut(s) 888, 918
Bsc4I CCNNNNNNNGG 9 cut(s) 20, 277, 302, 426, 806, 1409, 1552, 1660, 1841
Bse1I ACTGG 9 cut(s) 282, 503, 654, 1008, 1015, 1230, 1540, 1867, 2424
Bse21I CCTNAGG 3 cut(s) 366, 1336, 1836
Bse3DI GCAATG 2 cut(s) 2028, 2569
BseBI CCWGG 5 cut(s) 125, 263, 1046, 2703, 2784
BseDI CCNNGG 3 cut(s) 478, 640, 1627
BseGI GGATG 9 cut(s) 195, 1179, 1493, 1902, 2042, 2419, 2437, 2463, 2644
BseLI CCNNNNNNNGG 9 cut(s) 20, 277, 302, 426, 806, 1409, 1552, 1660, 1841
BseMI GCAATG 2 cut(s) 2028, 2569
BseMII CTCAG 7 cut(s) 380, 478, 532, 939, 1130, 2447, 2640
BseNI ACTGG 9 cut(s) 282, 503, 654, 1008, 1015, 1230, 1540, 1867, 2424
BseRI GAGGAG 1 cut(s) 1113
BseXI GCAGC 3 cut(s) 1403, 1954, 2403
BseYI CCCAGC 1 cut(s) 580
BsgI GTGCAG 1 cut(s) 371
BshFI GGCC 5 cut(s) 269, 378, 413, 502, 1464
BshNI GGYRCC 1 cut(s) 2304
BsiHKAI GWGCWC 2 cut(s) 74, 182
BsiHKCI CYCGRG 1 cut(s) 479
BsiSI CCGG 2 cut(s) 933, 2308
BslFI GGGAC 2 cut(s) 563, 1302
BslI CCNNNNNNNGG 9 cut(s) 20, 277, 302, 426, 806, 1409, 1552, 1660, 1841
BsmAI GTCTC 7 cut(s) 569, 1135, 1224, 1256, 2113, 2446, 2464
BsmFI GGGAC 2 cut(s) 563, 1302
BsmI GAATGC 1 cut(s) 2285
BsnI GGCC 5 cut(s) 269, 378, 413, 502, 1464
BsoBI CYCGRG 1 cut(s) 479
Bsp119I TTCGAA 1 cut(s) 105
Bsp1286I GDGCHC 2 cut(s) 74, 182
BspACI CCGC 2 cut(s) 424, 1400
BspANI GGCC 5 cut(s) 269, 378, 413, 502, 1464
BspCNI CTCAG 7 cut(s) 379, 477, 531, 940, 1131, 2448, 2641
BspHI TCATGA 1 cut(s) 174
BspLI GGNNCC 5 cut(s) 286, 905, 1761, 2306, 2683
BspMAI CTGCAG 2 cut(s) 209, 1972
BspMI ACCTGC 2 cut(s) 789, 1930
BspPI GGATC 6 cut(s) 155, 491, 1853, 2061, 2636, 2647
BspQI GCTCTTC 1 cut(s) 1370
BspT104I TTCGAA 1 cut(s) 105
BspT107I GGYRCC 1 cut(s) 2304
BspTI CTTAAG 2 cut(s) 1790, 2318
BsrDI GCAATG 2 cut(s) 2028, 2569
BsrI ACTGG 9 cut(s) 282, 503, 654, 1008, 1015, 1230, 1540, 1867, 2424
BssECI CCNNGG 3 cut(s) 478, 640, 1627
BssNAI GTATAC 2 cut(s) 1397, 2188
BssNI GRCGYC 1 cut(s) 1349
BssT1I CCWWGG 2 cut(s) 640, 1627
Bst1107I GTATAC 2 cut(s) 1397, 2188
Bst2UI CCWGG 5 cut(s) 125, 263, 1046, 2703, 2784
Bst4CI ACNGT 5 cut(s) 76, 455, 563, 721, 1454
Bst6I CTCTTC 5 cut(s) 822, 1370, 2258, 2444, 2736
BstACI GRCGYC 1 cut(s) 1349
BstAFI CTTAAG 2 cut(s) 1790, 2318
BstBAI YACGTR 1 cut(s) 2081
BstBI TTCGAA 1 cut(s) 105
BstC8I GCNNGC 4 cut(s) 1655, 1927, 2335, 2617
BstENI CCTNNNNNAGG 3 cut(s) 18, 300, 1839
BstF5I GGATG 9 cut(s) 195, 1179, 1493, 1902, 2042, 2419, 2437, 2463, 2644
BstH2I RGCGCY 1 cut(s) 1654
BstHHI GCGC 2 cut(s) 99, 1653
BstMAI GTCTC 7 cut(s) 569, 1135, 1224, 1256, 2113, 2446, 2464
BstMWI GCNNNNNNNGC 2 cut(s) 225, 1369
BstNI CCWGG 5 cut(s) 125, 263, 1046, 2703, 2784
BstNSI RCATGY 3 cut(s) 228, 1929, 2597
BstSCI CCNGG 5 cut(s) 123, 261, 1044, 2701, 2782
BstSFI CTRYAG 2 cut(s) 205, 1968
BstV1I GCAGC 3 cut(s) 1403, 1954, 2403
BstX2I RGATCY 4 cut(s) 160, 1845, 2066, 2652
BstXI CCANNNNNNTGG 1 cut(s) 785
BstYI RGATCY 4 cut(s) 160, 1845, 2066, 2652
BstZ17I GTATAC 2 cut(s) 1397, 2188
Bsu36I CCTNAGG 3 cut(s) 366, 1336, 1836
BsuRI GGCC 5 cut(s) 269, 378, 413, 502, 1464
BtsCI GGATG 9 cut(s) 195, 1179, 1493, 1902, 2042, 2419, 2437, 2463, 2644
BtsI GCAGTG 2 cut(s) 92, 580
BtsIMutI CAGTG 7 cut(s) 92, 451, 580, 661, 1001, 2209, 2431
BveI ACCTGC 2 cut(s) 789, 1930
Cac8I GCNNGC 4 cut(s) 1655, 1927, 2335, 2617
CaiI CAGNNNCTG 1 cut(s) 2473
CciI TCATGA 1 cut(s) 174
CfoI GCGC 2 cut(s) 99, 1653
Cfr13I GGNCC 5 cut(s) 268, 376, 500, 1319, 1463
Csp6I GTAC 7 cut(s) 692, 717, 1056, 1433, 1568, 2082, 2749
CspCI CAANNNNNGTGG 2 cut(s) 2504, 2539
CviQI GTAC 7 cut(s) 692, 717, 1056, 1433, 1568, 2082, 2749
DraI TTTAAA 3 cut(s) 40, 2368, 2553
DrdI GACNNNNNNGTC 1 cut(s) 1149
DriI GACNNNNNGTC 1 cut(s) 467
DseDI GACNNNNNNGTC 1 cut(s) 1149
EaeI YGGCCR 1 cut(s) 411
Eam1104I CTCTTC 5 cut(s) 822, 1370, 2258, 2444, 2736
Eam1105I GACNNNNNGTC 1 cut(s) 467
EarI CTCTTC 5 cut(s) 822, 1370, 2258, 2444, 2736
Ecl136II GAGCTC 1 cut(s) 180
Eco130I CCWWGG 2 cut(s) 640, 1627
Eco24I GRGCYC 1 cut(s) 182
Eco47I GGWCC 1 cut(s) 1319
Eco53kI GAGCTC 1 cut(s) 180
Eco57I CTGAAG 2 cut(s) 1259, 1278
Eco81I CCTNAGG 3 cut(s) 366, 1336, 1836
Eco88I CYCGRG 1 cut(s) 479
EcoICRI GAGCTC 1 cut(s) 180
EcoNI CCTNNNNNAGG 3 cut(s) 18, 300, 1839
EcoRI GAATTC 1 cut(s) 1766
EcoRII CCWGG 5 cut(s) 123, 261, 1044, 2701, 2782
EcoT14I CCWWGG 2 cut(s) 640, 1627
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 182
ErhI CCWWGG 2 cut(s) 640, 1627
FaqI GGGAC 2 cut(s) 563, 1302
FauI CCCGC 1 cut(s) 417
FbaI TGATCA 2 cut(s) 2434, 2716
FblI GTMKAC 3 cut(s) 382, 1396, 2187
Fnu4HI GCNGC 3 cut(s) 1417, 1968, 2417
FokI GGATG 9 cut(s) 182, 1166, 1480, 1889, 2049, 2406, 2444, 2450, 2651
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 3 cut(s) 1417, 1968, 2417
FspI TGCGCA 1 cut(s) 98
GlaI GCGC 2 cut(s) 98, 1652
GluI GCNGC 3 cut(s) 1417, 1968, 2417
GsaI CCCAGC 1 cut(s) 584
GsuI CTGGAG 3 cut(s) 284, 1915, 2685
HaeII RGCGCY 1 cut(s) 1654
HaeIII GGCC 5 cut(s) 269, 378, 413, 502, 1464
HapII CCGG 2 cut(s) 933, 2308
HhaI GCGC 2 cut(s) 99, 1653
Hin1I GRCGYC 1 cut(s) 1349
Hin6I GCGC 2 cut(s) 97, 1651
HinP1I GCGC 2 cut(s) 97, 1651
HincII GTYRAC 1 cut(s) 537
HindII GTYRAC 1 cut(s) 537
HindIII AAGCTT 3 cut(s) 961, 1271, 2617
HpaI GTTAAC 1 cut(s) 537
HpaII CCGG 2 cut(s) 933, 2308
HphI GGTGA 7 cut(s) 3, 158, 368, 979, 1622, 2219, 2612
Hpy166II GTNNAC 7 cut(s) 383, 537, 1207, 1397, 1541, 2188, 2528
Hpy188I TCNGA 8 cut(s) 258, 467, 1278, 1880, 2160, 2650, 2668, 2725
Hpy8I GTNNAC 7 cut(s) 383, 537, 1207, 1397, 1541, 2188, 2528
HpyAV CCTTC 8 cut(s) 243, 275, 306, 735, 1673, 1817, 1835, 2252
HpyCH4III ACNGT 5 cut(s) 76, 455, 563, 721, 1454
HpyCH4IV ACGT 3 cut(s) 1349, 2080, 2747
HpyF10VI GCNNNNNNNGC 2 cut(s) 225, 1369
HpySE526I ACGT 3 cut(s) 1349, 2080, 2747
Hsp92I GRCGYC 1 cut(s) 1349
HspAI GCGC 2 cut(s) 97, 1651
Ksp22I TGATCA 2 cut(s) 2434, 2716
KspAI GTTAAC 1 cut(s) 537
LguI GCTCTTC 1 cut(s) 1370
LmnI GCTCC 5 cut(s) 290, 909, 1648, 1934, 2255
Lsp1109I GCAGC 3 cut(s) 1403, 1954, 2403
LweI GCATC 6 cut(s) 98, 1188, 1804, 1911, 2267, 2428
MaeII ACGT 3 cut(s) 1349, 2080, 2747
MaeIII GTNAC 4 cut(s) 220, 1022, 1350, 2600
MfeI CAATTG 1 cut(s) 2535
MflI RGATCY 4 cut(s) 160, 1845, 2066, 2652
MhlI GDGCHC 2 cut(s) 74, 182
MlsI TGGCCA 1 cut(s) 413
MluNI TGGCCA 1 cut(s) 413
MlyI GAGTC 5 cut(s) 255, 456, 477, 891, 2402
MmeI TCCRAC 2 cut(s) 261, 510
Mox20I TGGCCA 1 cut(s) 413
Mph1103I ATGCAT 1 cut(s) 616
MroXI GAANNNNTTC 5 cut(s) 598, 1126, 1914, 2124, 2267
MscI TGGCCA 1 cut(s) 413
MslI CAYNNNNRTG 4 cut(s) 783, 2424, 2523, 2598
Msp20I TGGCCA 1 cut(s) 413
MspA1I CMGCKG 1 cut(s) 400
MspCI CTTAAG 2 cut(s) 1790, 2318
MspI CCGG 2 cut(s) 933, 2308
MspR9I CCNGG 5 cut(s) 125, 263, 1046, 2703, 2784
MssI GTTTAAAC 1 cut(s) 40
MunI CAATTG 1 cut(s) 2535
Mva1269I GAATGC 1 cut(s) 2285
MvaI CCWGG 5 cut(s) 125, 263, 1046, 2703, 2784
MwoI GCNNNNNNNGC 2 cut(s) 225, 1369
NlaIV GGNNCC 5 cut(s) 286, 905, 1761, 2306, 2683
NmeAIII GCCGAG 1 cut(s) 2583
NmuCI GTSAC 3 cut(s) 1022, 1350, 2600
NsbI TGCGCA 1 cut(s) 98
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 3 cut(s) 228, 1929, 2597
NspV TTCGAA 1 cut(s) 105
OliI CACNNNNGTG 1 cut(s) 2523
PaeI GCATGC 1 cut(s) 1929
PagI TCATGA 1 cut(s) 174
PaqCI CACCTGC 1 cut(s) 789
PciI ACATGT 1 cut(s) 2593
PciSI GCTCTTC 1 cut(s) 1370
PctI GAATGC 1 cut(s) 2285
PdmI GAANNNNTTC 5 cut(s) 598, 1126, 1914, 2124, 2267
PfeI GAWTC 7 cut(s) 83, 1112, 1300, 1490, 1741, 2311, 2726
PflMI CCANNNNNTGG 3 cut(s) 277, 806, 1409
PfoI TCCNGGA 1 cut(s) 2782
PkrI GCNGC 3 cut(s) 1418, 1969, 2418
PleI GAGTC 5 cut(s) 254, 456, 476, 891, 2402
PmeI GTTTAAAC 1 cut(s) 40
PpsI GAGTC 5 cut(s) 254, 456, 476, 891, 2402
Ppu21I YACGTR 1 cut(s) 2081
PscI ACATGT 1 cut(s) 2593
PshBI ATTAAT 1 cut(s) 2198
Psp124BI GAGCTC 1 cut(s) 182
Psp6I CCWGG 5 cut(s) 123, 261, 1044, 2701, 2782
PspFI CCCAGC 1 cut(s) 580
PspGI CCWGG 5 cut(s) 123, 261, 1044, 2701, 2782
PspN4I GGNNCC 5 cut(s) 286, 905, 1761, 2306, 2683
PspPI GGNCC 5 cut(s) 268, 376, 500, 1319, 1463
PstI CTGCAG 2 cut(s) 209, 1972
PstNI CAGNNNCTG 1 cut(s) 2473
PsuI RGATCY 4 cut(s) 160, 1845, 2066, 2652
PvuII CAGCTG 1 cut(s) 400
RsaI GTAC 7 cut(s) 693, 718, 1057, 1434, 1569, 2083, 2750
RsaNI GTAC 7 cut(s) 692, 717, 1056, 1433, 1568, 2082, 2749
RseI CAYNNNNRTG 4 cut(s) 783, 2424, 2523, 2598
SacI GAGCTC 1 cut(s) 182
SapI GCTCTTC 1 cut(s) 1370
SatI GCNGC 3 cut(s) 1417, 1968, 2417
Sau96I GGNCC 5 cut(s) 268, 376, 500, 1319, 1463
ScaI AGTACT 1 cut(s) 1434
SchI GAGTC 5 cut(s) 255, 456, 477, 891, 2402
ScrFI CCNGG 5 cut(s) 125, 263, 1046, 2703, 2784
SduI GDGCHC 2 cut(s) 74, 182
SfaNI GCATC 6 cut(s) 98, 1188, 1804, 1911, 2267, 2428
SfcI CTRYAG 2 cut(s) 205, 1968
SfuI TTCGAA 1 cut(s) 105
SinI GGWCC 1 cut(s) 1319
SmiMI CAYNNNNRTG 4 cut(s) 783, 2424, 2523, 2598
SmlI CTYRAG 5 cut(s) 18, 1064, 1790, 2318, 2338
SmoI CTYRAG 5 cut(s) 18, 1064, 1790, 2318, 2338
SpeI ACTAGT 3 cut(s) 1019, 1429, 2122
SphI GCATGC 1 cut(s) 1929
SsiI CCGC 2 cut(s) 424, 1400
SspI AATATT 3 cut(s) 742, 868, 2479
SstI GAGCTC 1 cut(s) 182
StyD4I CCNGG 5 cut(s) 123, 261, 1044, 2701, 2782
StyI CCWWGG 2 cut(s) 640, 1627
TaaI ACNGT 5 cut(s) 76, 455, 563, 721, 1454
TaiI ACGT 3 cut(s) 1352, 2083, 2750
TaqI TCGA 8 cut(s) 105, 244, 460, 474, 990, 2261, 2382, 2574
TatI WGTACW 3 cut(s) 691, 1055, 1432
TfiI GAWTC 7 cut(s) 83, 1112, 1300, 1490, 1741, 2311, 2726
TscAI CASTG 7 cut(s) 99, 458, 580, 661, 1008, 2209, 2431
TseFI GTSAC 3 cut(s) 1022, 1350, 2600
TseI GCWGC 3 cut(s) 1416, 1967, 2416
Tsp45I GTSAC 3 cut(s) 1022, 1350, 2600
TspRI CASTG 7 cut(s) 99, 458, 580, 661, 1008, 2209, 2431
Van91I CCANNNNNTGG 3 cut(s) 277, 806, 1409
Vha464I CTTAAG 2 cut(s) 1790, 2318
VpaK11BI GGWCC 1 cut(s) 1319
VspI ATTAAT 1 cut(s) 2198
XagI CCTNNNNNAGG 3 cut(s) 18, 300, 1839
XapI RAATTY 7 cut(s) 347, 360, 686, 854, 1030, 1693, 1766
XbaI TCTAGA 1 cut(s) 893
XceI RCATGY 3 cut(s) 228, 1929, 2597
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XmiI GTMKAC 3 cut(s) 382, 1396, 2187
XmnI GAANNNNTTC 5 cut(s) 598, 1126, 1914, 2124, 2267
ZraI GACGTC 1 cut(s) 1350
ZrmI AGTACT 1 cut(s) 1434
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.