MD12G1169700.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
25073923 .. 25077137
3215 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1169700.v1.1.491

Sequence Viewer

Length: 2733 bp
ATGATGGAGCATTCGCGTACTATTCGTAATCTGGTTTTGTTGAAATTCCTGCATGGCTTCTTTCTCTTAGTCTTATGCACGATGAGCTCATGTCCGGAATCTGAAGCATTTCCCAGCCCTACCCTGCTTGTAAACGAATCTAATCGCTTGGCTTTGCTAGACTTCAAGAAAAGAATAACTAAAGATCCTCTCAGTGTCATGAGCTCGTGGAATCATTCCATCCACTTCTGCAGTTGGGTAGGCATTACATGCCACCGTGCCACCCAAAGAGTCTTGATTCTGGAACTGGAAGATAAACAATTGGTAGGCTCCATTCCACCTTCCATTGGGAATCTTACTCGTCTAATTGATATAAGCTTGGGAATCAACAAGTTTCATGGTGAAATTCCTCAAGAACTGGGTCATCTACGTACCCTGGAAAGTCTCAACCTGTCTTTCAATTCTTTAGGTGGGAAAATTCCGACTAATATTGGAACCACCCCAGGTTGGATAGGAAACTTCTCTTCTTTGAGGGGTCTTAATCTTGGCGGCAACAATTTTCAAGGAAGCATACCAAATGAGCTCGGGCATATAACAACCTTGAAGCTATTCTTAGTTTGGGATAATAATTTGTCTGGTATGCTCCCTTCTTCAATTTATAATATTTCTTCCATATACAAAATCAGTGTTGGTAAAAACCAATTACATGGAGAGCTACCACCAAATCTCGGCATCTCGCTTCCTAATCTCGTAGAATTTTACTGTGGTGCCAACAATTTCACAGGAAATATTCCTGTATCATTGTCAAATGCTTCTAGACTTTATGCGATTGATTTTGCTTCAAATGGCCTCACGGGGGCAATCCCTGGAGAAGGACTCGGAAGCTTGCGAAGCTTAATTTGGCTAAACTTTGGAGGCAATAGACTGGGAAATGGAAAACTTGGGGTTAATTTGTTACATGGAAGCCTCCCAAACGGCATTGGAAATCTTATAAACCTTACCGATCTACAGATGTGTGTTAACTATTTGGCAGATGTTGTCCCTGAAGAAATTGGGAAGCTTGAGAAGATTGGGAAACTGTACTTGTTTGATAACAAATTTTCCGGGCCAATTCCATCTTCCCTGGGTAATATGACTTCATTGATAGAGTTTTCCATGTACAGAAATAGTTTTGAGGGAAGTATACCTCCAAGTCTTGGAAACTGCCAGAACCTGTTACTACTTGCACTTCATAATAACAATCTAACGGGCAGCATACCTCAAAAGCTTATGGAGCTTTCAACCCTTTCAATTGCTTTGGACCTGGCTGAAAATTATTTGACCGGTTCACTGCCAAGTATTGTGGGTGATCTGGTGCATCTCACAGAACTAGATGTATCAAACAATAAGTTATCAGGTGAAATCCCCAGCACCATCGATAGTTGTACTAGTTTGGGGCGCTTGTACTTGGATGACAACAAATTTGAAGGAACAATTCCTCAGTCTCTTAACGATTTAAAAGACTTGGAAGAACTTGACATTTCAAGCAATAACTTATCAGGGCAGATTCCTGAATTCATAAGCAAGCTTGGAGCACTTAAGTATCTCAATCTTTCGTATAATGATTTTGAAGGCGAGTTGCCTAAAGAAGGATTTTTTTCAAATGTCGGTGGTGTCTCAGTTCTTGGAAATCATAGGCTCTATGGTGACATCCCACAATTACATCTACCTGCATGCCCCAAAAATAAACACCATTCATCTCGAGAACTACTTTCCCTAAAAGTAGTCATCCCTATATCTTGTGCACTTGCATTCATAATTGCTCTATCATGCTTCTTCGGTGCTCGTTCAATGCTGAAAAAGTCAAGAGATGGACTTGTAACTTCGCGTTCTTATAAGGATTGGAAATTAGGTGTTTCCTACTCACAACTTGTTGAATCGACTAACGGCTTCTCTGTGGATAATTTGATTGGTTTGGGAAGTTTTGGTTTTGTTTATAAAGGGGTAATTCCTAGGGGTGGAAAGGTAGTTGCTGTTAAGGTATCAAACCTTCAACAACGAGGAGCGTCCAAGAGTTTCAATGATGAATGCAAAGCTTTAAGAAGTGTCAGGCACCGAAATCTTCTCAAGATCGTAACTGCATGCTCAAGCATTGATAATCATGGTAGAGACTTCAAAAGTCTAGTCTTCGAGTTCATGCCAAATGGAAGTCTTGACTCGTGGTTGCATCCTAGAGATGAGGAGCAATCTCCAAATTATCTCCACAACCATTGTGAAACGTCCATTGTTCATTGTGATTTAAAGTTGATCAATGTACTTCTTGATGAAGACATGGTAGCCCATGTTGGGGATTTTGGTTTAGCAAGGTTCCTCTTGGAAGCATCAAATGATCATTCCCTCAGTCAAACAATGTCATCGCAACTAAAGGGTTCTGTAGAGTACAGCATGGGAGGCCAAGTTTCCATATTGGGAGATGTTTACAGCTACGGGATACTCTTGCTAGAAATGTTCACAGGAGAAACACCTACTGATGACAAGTTCATCGAAGGTTTAAGCATTTACAAATTCGCAGCCATGGCTTTGCCCGACCATGTCATGGACGTTGTTTACCCTACATTGCTCCTCGACCTCAAAGCTGAGGGTAGTGTTAACGATGACAGATACGAAAGAACTGCGCTGCCTAGACGTAACAATCGCGGAGTGGTGAAAGCAAAAAAGGTAGAGGAATGCTTGTTTGCTGTGATGCAGATAGGACTTTCCTGCTGTGTAGTATAA

Protein Analysis

911

Amino Acids

99.69

Weight (kDa)

6.16

Isoelectric Point (pI)

33.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 84 2.2e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 314 - 418 8.6e-06 Leucine-rich repeat region
LRR_14 PF23598 387 - 525 3.2e-11 Leucine-rich repeat region
LRR_8 PF13855 470 - 529 4.2e-09 Leucine rich repeat
Pkinase PF00069 638 - 830 8.5e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 639 - 831 1.2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 639, 971, 1854, 1956
Acc36I ACCTGC 1 cut(s) 1696
AccB1I GGYRCC 2 cut(s) 746, 2070
AccB7I CCANNNNNTGG 2 cut(s) 1175, 2554
AccI GTMKAC 1 cut(s) 1162
AccII CGCG 3 cut(s) 16, 1846, 2655
AccIII TCCGGA 1 cut(s) 94
AciI CCGC 2 cut(s) 528, 2655
AclWI GGATC 1 cut(s) 179
AcsI RAATTY 8 cut(s) 44, 384, 456, 734, 1076, 1439, 1532, 2522
AcuI CTGAAG 2 cut(s) 123, 1044
AfaI GTAC 8 cut(s) 19, 412, 1061, 1139, 1405, 1424, 2274, 2399
AflII CTTAAG 1 cut(s) 1556
AgeI ACCGGT 1 cut(s) 1301
AhlI ACTAGT 1 cut(s) 1406
AjnI CCWGG 5 cut(s) 414, 481, 844, 1101, 1281
AjuI GAANNNNNNNTTGG 4 cut(s) 862, 894, 1081, 1113
Alw21I GWGCWC 6 cut(s) 89, 206, 564, 1555, 1765, 1804
Alw26I GTCTC 4 cut(s) 428, 1467, 1639, 2121
Alw44I GTGCAC 1 cut(s) 1761
AlwI GGATC 1 cut(s) 179
AlwNI CAGNNNCTG 1 cut(s) 1192
Ama87I CYCGRG 2 cut(s) 563, 1719
Aor13HI TCCGGA 1 cut(s) 94
AoxI GGCC 3 cut(s) 826, 1085, 2410
ApaLI GTGCAC 1 cut(s) 1761
ApeKI GCWGC 3 cut(s) 1230, 2528, 2635
ApoI RAATTY 8 cut(s) 44, 384, 456, 734, 1076, 1439, 1532, 2522
ArsI GACNNNNNNTTYG 4 cut(s) 1424, 1456, 2127, 2159
AsiGI ACCGGT 1 cut(s) 1301
Asp700I GAANNNNTTC 2 cut(s) 108, 587
AspA2I CCTAGG 1 cut(s) 1970
AspLEI GCGC 2 cut(s) 1419, 2635
AspS9I GGNCC 2 cut(s) 1085, 1279
AsuC2I CCSGG 1 cut(s) 1084
AsuHPI GGTGA 5 cut(s) 392, 1337, 1388, 1676, 2674
AvaI CYCGRG 2 cut(s) 563, 1719
AvaII GGWCC 1 cut(s) 1279
AvrII CCTAGG 1 cut(s) 1970
BaeGI GKGCMC 1 cut(s) 1765
BaeI ACNNNNGTAYC 2 cut(s) 1544, 1577
BanI GGYRCC 2 cut(s) 746, 2070
BanII GRGCYC 3 cut(s) 89, 206, 564
BarI GAAGNNNNNNTAC 6 cut(s) 610, 642, 1099, 1131, 1992, 2024
BauI CACGAG 2 cut(s) 205, 2176
BbsI GAAGAC 2 cut(s) 2137, 2292
Bbv12I GWGCWC 6 cut(s) 89, 206, 564, 1555, 1765, 1804
BbvCI CCTCAGC 1 cut(s) 2595
BbvI GCAGC 3 cut(s) 1242, 2540, 2622
BccI CCATC 4 cut(s) 227, 1102, 1400, 1823
BceAI ACGGC 2 cut(s) 970, 1921
BcgI CGANNNNNNTGC 2 cut(s) 2612, 2646
BciT130I CCWGG 5 cut(s) 416, 483, 846, 1103, 1283
BciVI GTATCC 1 cut(s) 2442
BclI TGATCA 2 cut(s) 2265, 2347
BcnI CCSGG 1 cut(s) 1084
BcoDI GTCTC 4 cut(s) 428, 1467, 1639, 2121
BcuI ACTAGT 1 cut(s) 1406
BfaI CTAG 9 cut(s) 158, 795, 1349, 1407, 1971, 2141, 2190, 2459, 2640
BfmI CTRYAG 3 cut(s) 229, 986, 2391
BfoI RGCGCY 1 cut(s) 1420
BfrI CTTAAG 1 cut(s) 1556
BfuAI ACCTGC 1 cut(s) 1696
BfuI GTATCC 1 cut(s) 2442
BisI GCNGC 4 cut(s) 529, 1231, 2529, 2636
BlnI CCTAGG 1 cut(s) 1970
BlsI GCNGC 4 cut(s) 530, 1232, 2530, 2637
Bme1390I CCNGG 6 cut(s) 416, 483, 846, 1084, 1103, 1283
Bme18I GGWCC 1 cut(s) 1279
BmeT110I CYCGRG 2 cut(s) 563, 1719
BmgT120I GGNCC 2 cut(s) 1085, 1279
BmiI GGNNCC 5 cut(s) 310, 475, 748, 2072, 2327
BmrFI CCNGG 6 cut(s) 416, 483, 846, 1084, 1103, 1283
BmrI ACTGGG 2 cut(s) 407, 914
BmsI GCATC 5 cut(s) 720, 1345, 2194, 2348, 2691
BmuI ACTGGG 2 cut(s) 407, 914
BpiI GAAGAC 2 cut(s) 2137, 2292
BplI GAGNNNNNCTC 2 cut(s) 840, 872
BpmI CTGGAG 1 cut(s) 867
Bpu10I CCTNAGC 1 cut(s) 2595
BpuEI CTTGAG 4 cut(s) 375, 1061, 2069, 2089
BpuMI CCSGG 1 cut(s) 1084
Bsa29I ATCGAT 1 cut(s) 1395
BsaAI YACGTR 1 cut(s) 410
BsaJI CCNNGG 7 cut(s) 414, 481, 844, 1101, 1102, 1970, 2532
BsaWI WCCGGW 2 cut(s) 94, 1301
BsaXI ACNNNNNCTCC 2 cut(s) 2400, 2430
Bse118I RCCGGY 1 cut(s) 1301
Bse1I ACTGG 3 cut(s) 291, 402, 909
Bse3DI GCAATG 1 cut(s) 2573
BseAI TCCGGA 1 cut(s) 94
BseBI CCWGG 5 cut(s) 416, 483, 846, 1103, 1283
BseCI ATCGAT 1 cut(s) 1395
BseDI CCNNGG 7 cut(s) 414, 481, 844, 1101, 1102, 1970, 2532
BseGI GGATG 5 cut(s) 219, 1435, 1668, 1746, 2185
BseMI GCAATG 1 cut(s) 2573
BseMII CTCAG 5 cut(s) 205, 1472, 1650, 2371, 2586
BseNI ACTGG 3 cut(s) 291, 402, 909
BseRI GAGGAG 3 cut(s) 2034, 2213, 2570
BseSI GKGCMC 1 cut(s) 1765
BseXI GCAGC 3 cut(s) 1242, 2540, 2622
BseYI CCCAGC 2 cut(s) 113, 1385
Bsh1236I CGCG 3 cut(s) 16, 1846, 2655
BshFI GGCC 3 cut(s) 828, 1087, 2412
BshNI GGYRCC 2 cut(s) 746, 2070
BshTI ACCGGT 1 cut(s) 1301
BshVI ATCGAT 1 cut(s) 1395
BsiHKAI GWGCWC 6 cut(s) 89, 206, 564, 1555, 1765, 1804
BsiHKCI CYCGRG 2 cut(s) 563, 1719
BsiSI CCGG 3 cut(s) 95, 1083, 1302
BslFI GGGAC 1 cut(s) 1004
BsmAI GTCTC 4 cut(s) 428, 1467, 1639, 2121
BsmFI GGGAC 1 cut(s) 1004
BsmI GAATGC 4 cut(s) 10, 1769, 2051, 2690
BsnI GGCC 3 cut(s) 828, 1087, 2412
BsoBI CYCGRG 2 cut(s) 563, 1719
Bsp1286I GDGCHC 6 cut(s) 89, 206, 564, 1555, 1765, 1804
Bsp13I TCCGGA 1 cut(s) 94
Bsp1407I TGTACA 1 cut(s) 1137
Bsp143I GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
Bsp19I CCATGG 1 cut(s) 2532
BspACI CCGC 2 cut(s) 528, 2655
BspANI GGCC 3 cut(s) 828, 1087, 2412
BspCNI CTCAG 5 cut(s) 204, 1471, 1649, 2370, 2587
BspDI ATCGAT 1 cut(s) 1395
BspEI TCCGGA 1 cut(s) 94
BspFNI CGCG 3 cut(s) 16, 1846, 2655
BspHI TCATGA 1 cut(s) 198
BspLI GGNNCC 5 cut(s) 310, 475, 748, 2072, 2327
BspMAI CTGCAG 1 cut(s) 233
BspMI ACCTGC 1 cut(s) 1696
BspPI GGATC 1 cut(s) 179
BspT107I GGYRCC 2 cut(s) 746, 2070
BspTI CTTAAG 1 cut(s) 1556
BsrDI GCAATG 1 cut(s) 2573
BsrFI RCCGGY 1 cut(s) 1301
BsrGI TGTACA 1 cut(s) 1137
BsrI ACTGG 3 cut(s) 291, 402, 909
BssAI RCCGGY 1 cut(s) 1301
BssECI CCNNGG 7 cut(s) 414, 481, 844, 1101, 1102, 1970, 2532
BssMI GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
BssNAI GTATAC 1 cut(s) 1163
BssSI CACGAG 2 cut(s) 205, 2176
BssT1I CCWWGG 2 cut(s) 1970, 2532
Bst1107I GTATAC 1 cut(s) 1163
Bst2BI CACGAG 2 cut(s) 205, 2176
Bst2UI CCWGG 5 cut(s) 416, 483, 846, 1103, 1283
Bst4CI ACNGT 3 cut(s) 257, 743, 1059
Bst6I CTCTTC 1 cut(s) 508
BstAFI CTTAAG 1 cut(s) 1556
BstAPI GCANNNNNTGC 1 cut(s) 249
BstAUI TGTACA 1 cut(s) 1137
BstBAI YACGTR 1 cut(s) 410
BstC8I GCNNGC 4 cut(s) 866, 1544, 1693, 2101
BstDEI CTNAG 7 cut(s) 67, 191, 592, 1458, 1636, 2357, 2595
BstDSI CCRYGG 1 cut(s) 2532
BstENI CCTNNNNNAGG 2 cut(s) 849, 1605
BstF5I GGATG 5 cut(s) 219, 1435, 1668, 1746, 2185
BstFNI CGCG 3 cut(s) 16, 1846, 2655
BstH2I RGCGCY 1 cut(s) 1420
BstHHI GCGC 2 cut(s) 1419, 2635
BstKTI GATC 6 cut(s) 187, 985, 1330, 2091, 2268, 2350
BstMAI GTCTC 4 cut(s) 428, 1467, 1639, 2121
BstMBI GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
BstMWI GCNNNNNNNGC 6 cut(s) 84, 249, 870, 1252, 2409, 2534
BstNI CCWGG 5 cut(s) 416, 483, 846, 1103, 1283
BstNSI RCATGY 3 cut(s) 252, 1695, 2103
BstSCI CCNGG 6 cut(s) 414, 481, 844, 1082, 1101, 1281
BstSFI CTRYAG 3 cut(s) 229, 986, 2391
BstSLI GKGCMC 1 cut(s) 1765
BstSNI TACGTA 1 cut(s) 410
BstUI CGCG 3 cut(s) 16, 1846, 2655
BstV1I GCAGC 3 cut(s) 1242, 2540, 2622
BstV2I GAAGAC 2 cut(s) 2137, 2292
BstX2I RGATCY 1 cut(s) 184
BstXI CCANNNNNNTGG 1 cut(s) 686
BstYI RGATCY 1 cut(s) 184
BstZ17I GTATAC 1 cut(s) 1163
Bsu15I ATCGAT 1 cut(s) 1395
BsuI GTATCC 1 cut(s) 2442
BsuRI GGCC 3 cut(s) 828, 1087, 2412
BsuTUI ATCGAT 1 cut(s) 1395
BtgI CCRYGG 1 cut(s) 2532
BtgZI GCGATG 1 cut(s) 2358
BtsCI GGATG 5 cut(s) 219, 1435, 1668, 1746, 2185
BtsI GCAGTG 1 cut(s) 1307
BtsIMutI CAGTG 3 cut(s) 199, 670, 1307
BveI ACCTGC 1 cut(s) 1696
Cac8I GCNNGC 4 cut(s) 866, 1544, 1693, 2101
CaiI CAGNNNCTG 1 cut(s) 1192
CciI TCATGA 1 cut(s) 198
CfoI GCGC 2 cut(s) 1419, 2635
Cfr10I RCCGGY 1 cut(s) 1301
Cfr13I GGNCC 2 cut(s) 1085, 1279
ClaI ATCGAT 1 cut(s) 1395
CseI GACGC 1 cut(s) 2013
Csp6I GTAC 8 cut(s) 18, 411, 1060, 1138, 1404, 1423, 2273, 2398
CspAI ACCGGT 1 cut(s) 1301
CspCI CAANNNNNGTGG 4 cut(s) 1302, 1337, 2210, 2245
CviQI GTAC 8 cut(s) 18, 411, 1060, 1138, 1404, 1423, 2273, 2398
DdeI CTNAG 7 cut(s) 67, 191, 592, 1458, 1636, 2357, 2595
DpnI GATC 6 cut(s) 186, 984, 1329, 2090, 2267, 2349
DpnII GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
DraI TTTAAA 2 cut(s) 1476, 2259
Eam1104I CTCTTC 1 cut(s) 508
EarI CTCTTC 1 cut(s) 508
Ecl136II GAGCTC 3 cut(s) 87, 204, 562
Eco105I TACGTA 1 cut(s) 410
Eco130I CCWWGG 2 cut(s) 1970, 2532
Eco24I GRGCYC 3 cut(s) 89, 206, 564
Eco47I GGWCC 1 cut(s) 1279
Eco53kI GAGCTC 3 cut(s) 87, 204, 562
Eco57I CTGAAG 2 cut(s) 123, 1044
Eco88I CYCGRG 2 cut(s) 563, 1719
EcoICRI GAGCTC 3 cut(s) 87, 204, 562
EcoNI CCTNNNNNAGG 2 cut(s) 849, 1605
EcoRI GAATTC 1 cut(s) 1532
EcoRII CCWGG 5 cut(s) 414, 481, 844, 1101, 1281
EcoT14I CCWWGG 2 cut(s) 1970, 2532
EcoT38I GRGCYC 3 cut(s) 89, 206, 564
ErhI CCWWGG 2 cut(s) 1970, 2532
FalI AAGNNNNNCTT 2 cut(s) 575, 607
FaqI GGGAC 1 cut(s) 1004
FbaI TGATCA 2 cut(s) 2265, 2347
FblI GTMKAC 1 cut(s) 1162
Fnu4HI GCNGC 4 cut(s) 529, 1231, 2529, 2636
FokI GGATG 5 cut(s) 206, 1442, 1655, 1733, 2172
FriOI GRGCYC 3 cut(s) 89, 206, 564
Fsp4HI GCNGC 4 cut(s) 529, 1231, 2529, 2636
FspBI CTAG 9 cut(s) 158, 795, 1349, 1407, 1971, 2141, 2190, 2459, 2640
GlaI GCGC 2 cut(s) 1418, 2634
GluI GCNGC 4 cut(s) 529, 1231, 2529, 2636
GsaI CCCAGC 2 cut(s) 117, 1389
GsuI CTGGAG 1 cut(s) 867
HaeII RGCGCY 1 cut(s) 1420
HaeIII GGCC 3 cut(s) 828, 1087, 2412
HapII CCGG 3 cut(s) 95, 1083, 1302
HgaI GACGC 1 cut(s) 2013
HhaI GCGC 2 cut(s) 1419, 2635
Hin6I GCGC 2 cut(s) 1417, 2633
HinP1I GCGC 2 cut(s) 1417, 2633
HincII GTYRAC 2 cut(s) 1000, 2608
HindII GTYRAC 2 cut(s) 1000, 2608
HindIII AAGCTT 7 cut(s) 355, 862, 871, 1037, 1244, 1544, 2052
HpaI GTTAAC 2 cut(s) 1000, 2608
HpaII CCGG 3 cut(s) 95, 1083, 1302
HphI GGTGA 5 cut(s) 392, 1337, 1388, 1676, 2674
Hpy166II GTNNAC 9 cut(s) 133, 1000, 1163, 1307, 1763, 2437, 2469, 2566, 2608
Hpy188I TCNGA 3 cut(s) 103, 462, 860
Hpy8I GTNNAC 9 cut(s) 133, 1000, 1163, 1307, 1763, 2437, 2469, 2566, 2608
HpyAV CCTTC 8 cut(s) 330, 636, 845, 1439, 1583, 1601, 2018, 2498
HpyCH4III ACNGT 3 cut(s) 257, 743, 1059
HpyCH4IV ACGT 4 cut(s) 409, 2237, 2559, 2644
HpyF10VI GCNNNNNNNGC 6 cut(s) 84, 249, 870, 1252, 2409, 2534
HpyF3I CTNAG 7 cut(s) 67, 191, 592, 1458, 1636, 2357, 2595
HpySE526I ACGT 4 cut(s) 409, 2237, 2559, 2644
HspAI GCGC 2 cut(s) 1417, 2633
Kpn2I TCCGGA 1 cut(s) 94
Ksp22I TGATCA 2 cut(s) 2265, 2347
KspAI GTTAAC 2 cut(s) 1000, 2608
Kzo9I GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
LmnI GCTCC 8 cut(s) 7, 314, 627, 1252, 1550, 2021, 2200, 2583
Lsp1109I GCAGC 3 cut(s) 1242, 2540, 2622
LweI GCATC 5 cut(s) 720, 1345, 2194, 2348, 2691
MaeI CTAG 9 cut(s) 158, 795, 1349, 1407, 1971, 2141, 2190, 2459, 2640
MaeII ACGT 4 cut(s) 409, 2237, 2559, 2644
MaeIII GTNAC 6 cut(s) 933, 1194, 1664, 1837, 2092, 2645
MalI GATC 6 cut(s) 186, 984, 1329, 2090, 2267, 2349
MboI GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
MfeI CAATTG 2 cut(s) 299, 1269
MflI RGATCY 1 cut(s) 184
MhlI GDGCHC 6 cut(s) 89, 206, 564, 1555, 1765, 1804
MlyI GAGTC 3 cut(s) 279, 849, 2168
MmeI TCCRAC 2 cut(s) 467, 485
MroI TCCGGA 1 cut(s) 94
MroXI GAANNNNTTC 2 cut(s) 108, 587
MspCI CTTAAG 1 cut(s) 1556
MspI CCGG 3 cut(s) 95, 1083, 1302
MspR9I CCNGG 6 cut(s) 416, 483, 846, 1084, 1103, 1283
MunI CAATTG 2 cut(s) 299, 1269
Mva1269I GAATGC 4 cut(s) 10, 1769, 2051, 2690
MvaI CCWGG 5 cut(s) 416, 483, 846, 1103, 1283
MvnI CGCG 3 cut(s) 16, 1846, 2655
MwoI GCNNNNNNNGC 6 cut(s) 84, 249, 870, 1252, 2409, 2534
NciI CCSGG 1 cut(s) 1084
NcoI CCATGG 1 cut(s) 2532
NdeII GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
NlaIV GGNNCC 5 cut(s) 310, 475, 748, 2072, 2327
NmeAIII GCCGAG 1 cut(s) 687
NmuCI GTSAC 1 cut(s) 1664
NspI RCATGY 3 cut(s) 252, 1695, 2103
PaeI GCATGC 2 cut(s) 1695, 2103
PaeR7I CTCGAG 1 cut(s) 1719
PagI TCATGA 1 cut(s) 198
PasI CCCWGGG 1 cut(s) 1102
PctI GAATGC 4 cut(s) 10, 1769, 2051, 2690
PdmI GAANNNNTTC 2 cut(s) 108, 587
PfeI GAWTC 8 cut(s) 98, 137, 211, 277, 331, 363, 1525, 1895
PflFI GACNNNGTC 1 cut(s) 2549
PflMI CCANNNNNTGG 2 cut(s) 1175, 2554
PinAI ACCGGT 1 cut(s) 1301
PkrI GCNGC 4 cut(s) 530, 1232, 2530, 2637
PleI GAGTC 3 cut(s) 278, 849, 2168
PpsI GAGTC 3 cut(s) 278, 849, 2168
Ppu21I YACGTR 1 cut(s) 410
PsiI TTATAA 4 cut(s) 639, 971, 1854, 1956
Psp124BI GAGCTC 3 cut(s) 89, 206, 564
Psp6I CCWGG 5 cut(s) 414, 481, 844, 1101, 1281
PspFI CCCAGC 2 cut(s) 113, 1385
PspGI CCWGG 5 cut(s) 414, 481, 844, 1101, 1281
PspN4I GGNNCC 5 cut(s) 310, 475, 748, 2072, 2327
PspPI GGNCC 2 cut(s) 1085, 1279
PstI CTGCAG 1 cut(s) 233
PstNI CAGNNNCTG 1 cut(s) 1192
PsuI RGATCY 1 cut(s) 184
PsyI GACNNNGTC 1 cut(s) 2549
RsaI GTAC 8 cut(s) 19, 412, 1061, 1139, 1405, 1424, 2274, 2399
RsaNI GTAC 8 cut(s) 18, 411, 1060, 1138, 1404, 1423, 2273, 2398
SacI GAGCTC 3 cut(s) 89, 206, 564
SatI GCNGC 4 cut(s) 529, 1231, 2529, 2636
Sau3AI GATC 6 cut(s) 184, 982, 1327, 2088, 2265, 2347
Sau96I GGNCC 2 cut(s) 1085, 1279
SchI GAGTC 3 cut(s) 279, 849, 2168
ScrFI CCNGG 6 cut(s) 416, 483, 846, 1084, 1103, 1283
SduI GDGCHC 6 cut(s) 89, 206, 564, 1555, 1765, 1804
SfaNI GCATC 5 cut(s) 720, 1345, 2194, 2348, 2691
SfcI CTRYAG 3 cut(s) 229, 986, 2391
Sfr274I CTCGAG 1 cut(s) 1719
SinI GGWCC 1 cut(s) 1279
SlaI CTCGAG 1 cut(s) 1719
SmlI CTYRAG 6 cut(s) 390, 1040, 1556, 1719, 2084, 2104
SmoI CTYRAG 6 cut(s) 390, 1040, 1556, 1719, 2084, 2104
SnaBI TACGTA 1 cut(s) 410
SpeI ACTAGT 1 cut(s) 1406
SphI GCATGC 2 cut(s) 1695, 2103
SsiI CCGC 2 cut(s) 528, 2655
SspI AATATT 3 cut(s) 469, 643, 769
SspMI CTAG 9 cut(s) 158, 795, 1349, 1407, 1971, 2141, 2190, 2459, 2640
SstI GAGCTC 3 cut(s) 89, 206, 564
StyD4I CCNGG 6 cut(s) 414, 481, 844, 1082, 1101, 1281
StyI CCWWGG 2 cut(s) 1970, 2532
TaaI ACNGT 3 cut(s) 257, 743, 1059
TaiI ACGT 4 cut(s) 412, 2240, 2562, 2647
TaqI TCGA 6 cut(s) 1395, 1720, 1898, 2148, 2502, 2583
TatI WGTACW 6 cut(s) 1059, 1137, 1403, 1422, 2272, 2397
TauI GCSGC 1 cut(s) 531
TfiI GAWTC 8 cut(s) 98, 137, 211, 277, 331, 363, 1525, 1895
TscAI CASTG 3 cut(s) 199, 670, 1314
TseFI GTSAC 1 cut(s) 1664
TseI GCWGC 3 cut(s) 1230, 2528, 2635
Tsp45I GTSAC 1 cut(s) 1664
TspRI CASTG 3 cut(s) 199, 670, 1314
Tth111I GACNNNGTC 1 cut(s) 2549
Van91I CCANNNNNTGG 2 cut(s) 1175, 2554
Vha464I CTTAAG 1 cut(s) 1556
VneI GTGCAC 1 cut(s) 1761
VpaK11BI GGWCC 1 cut(s) 1279
XagI CCTNNNNNAGG 2 cut(s) 849, 1605
XapI RAATTY 8 cut(s) 44, 384, 456, 734, 1076, 1439, 1532, 2522
XbaI TCTAGA 1 cut(s) 794
XceI RCATGY 3 cut(s) 252, 1695, 2103
XhoI CTCGAG 1 cut(s) 1719
XmaJI CCTAGG 1 cut(s) 1970
XmiI GTMKAC 1 cut(s) 1162
XmnI GAANNNNTTC 2 cut(s) 108, 587
XspI CTAG 9 cut(s) 158, 795, 1349, 1407, 1971, 2141, 2190, 2459, 2640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.