pycom12g12650

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
15117822 .. 15121261
3440 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g12650.1

Sequence Viewer

Length: 3201 bp
ATGCCCAATTGGACTGTGAGGACAAAGACCTGGGAGCTGCAGACTAATTTGCTCTTCCAATTCCTTGCTAGACACGGTGGGAGCTGTGGGCTATTTTCGGTCTCTTCACAATCACTGGCTATAATTCAATCAAGATTATGTTCTATCCAAAAGAGAGAGAAAAAAAAAAAACAGAGTTTCTTATTTGGAATCTATATTTTGGTGAGGATGGAGCATGCACGTACTACTGGAGGCAGGCTGAGTTTGGTTAAACTCTTTCATGGCTTCATTCTGTTATGCATGAGCACACGTATGGGATCTGCAGCACTCTCCAGCACTAGTCTTGGAAATGAAACTGATCGCATGGTGCTACTCAACTTCAAGAAAAGCATCACTCAAGATCCTCTCCATGTCATGAGCTCATGGAATGAATCCGTCCATTTCTGCGGTTGGGTAGGCATTACGTGCAACCATTACACCAGAAGAGTCTTCATGTTGAACCTGCAAGATCAGAAATTGGCAGGCTCTTTACCTCATTCTATAGGAAACCTTTCCTATCTTGCTAGAATCAACCTAGGAAGCAATAGCTTTCGTGGTGAAATTCCTGAAGAAATCGGTCGTCTGCAAAGCCTGCACTTTCTCAACTTGTCTCACAATTCCTTCAGCGGGAAAATTCCAACCAATTTATCCCAGTGTACACAACTAAAGACGATTGAGTTTGGTCACAATGAGCTTATTGGGTCAATTCCAAACCAACTCAGTTCCTTGTTGAAATTAAATCATATGGGGTTTGATAATAACAATCTCACTGGAACCATCCCGACTTGGATAGGAAACTTTTCTTCTCTGCATCACTTTGATCTTAGCTTTAACAACTTGCGAGGAAGCATACCCAATGAGCTCGGGCGGCTAACAAGATTGCGAAGATTCACACTTCAAGAAGACAATCTCTCTGGTATAATCCCTGCTTCAATCTATAATATTTCTTCCATATCCTTGTTTGGTGTTGTTCTAAACCAACTGCATGGAGAGCTACCGCCAAATGTCGGCACTACTCTTCCTAATCTCCAAAAATTTGTCGGTGGCAGCAACAAATTCACAGGAAATATTCCCGCATCATTGGTAAATGCTTCTAGACTAGAAGTTTTTGACTTTGCTAAAAATGATCTTACTGGAACAATTCCTGCTGAAAATCTTGGATCCTTACGAAGCTTAGTTAAGCTAGACCTTAATAGCAATAGGCTGGGAAGTGGGAAAACTGGCGACCTGAATTTTCTCAAATTTTTGGCTAATTGTACTAGTCTTGAGTTGTTGAATCTTTACAAAAATCAATTTGGAGGAAAATTGCCCGTATCCATTTCCAACCTTTCTACCACACTAAGAAATCTTTATCTGGGGACAAATTTGATACATGGAAGCATCCCCTTGGGTATTGAAAATCTTGTAAATTTGGCCGATATTGGAATGGAGAATAACGATTTCAGTGGTAGTCTCCCTAAAGAAATTGGGAAGCTTCAGAAATTGGAAGACTTAAGTTTGGGCGACAACAATTTTTCTGGACCAATCCCATCATCTCTAGGTAACTTGACTTTATTGACACAACTCTATCTATACAACAATAGATTTGCTGGAAACATACCACCAAGTCTAGGAGATTGCCAACATCTACTAGCACTTGACCTTTCTGGAAACAATCTTACAGGCACCATACCTACAAAGATTTTTAGGCTTTCATCCCTTTCAATTTATTTGGTAATGTCAGACAACCAGTTGACAGGTCCAGTGCAATCTGAAGTTGGTCTTTTGGTAAATCTAGTAGAGCTAGATTTATCAAGAAACAATTTATCAGCTGAAATTCCCCCAAGCATTGGAAGTTGTATTATGTTGGTGCGTTTGTATTTGGGAGGTAATGAATTTCAAGGAATAATTCCTCAATCTCTTAAAAGTTTAAGAAGCCTGGAAGAGATGGATCTTTCACGCAATAACTTATTCGGGCAGATTCCTGAATTTCTAACCAAGTATAGATTTCTTAGGCATCTCAACCTTTCATATAACAATTTTGAGGGTAAAATGCCTGAAGAAGGAATCTTTTCAAATGCAACTGGTCTCTCAATTCTTGGAAATCCTAAGCTCTGTGGTGGCAGCTCGAAATTACATTTACCTGCTTGCCCCAACATGCCTCATTCATCTCGAGGACTACTTGCCCGAAAAGTAATCATCCCAGTAGCTTGTGCACTTGCCTTCATAATTGCTATGTCTTGCTTCATTGTTGCTTGCTCAATGCTTAAAAAACGAAGAGGTATACCTGCAACTTCATGTTCTTATAAAGATTGGAAATCAGGAGTCTCTTACTCAGAACTTGTTGAATCCACTAACGGGTTCTCTAGGGAAAATTTGATTGGTTCAGGAAGTTTTGGTTCTGTTTACAAAGGAGTAGCCCCCGGTGATGGAACTCTAGTTGCAGTAAAGGTATTAAACCTTCAACAACAAGGAGCATCCAAGAGTTTTATGGATGAATGCAAAGCTTTGAGAAGCATAAGACACCGTAATCTTCTCAAGGTCATAACTGCATGCTCAAGCATTGACAATCAGGGTCAAGATTTCAAAAGTCTAGTTTTTGAGTACATGGTGAATGGAAGCCTAGATATGTGGTTGCATCCGAGACATGATGAGCAATCTCAAAGCAAGAGATTGAGCCTTATCCAAAGACTCAATATTGCAATTGATGTTGCTTTAGCATTGGATTATCTCCACCACCGTTGTGAAACTTCAATTGTTCATTGTGATATGAAGCCAAGTAATGTTCTTCTTGACGAAGATATGGTAGCTCACGTTGGTGACTTTGGTTTAGCAAGGTTCCTCTTGGCAGAGTCTGATGATCCATCTCAAAGTCAAACCATGTCAACCGAGTTAAAGGGTTCGATAGGTTACATTCCTCCAGGAAGAAAACCTACAGATGACACGTTCAACGATGGTCAAAGCATTCGCCAGTTCGCTACCATAGCGATGCCTGACCATGCCATGGACATAGTTGACCCTTCATTGCTCATTGAATGTGGAGATGTAGATGGCAGCCGACTTGAAGCAAGAAGGTTGGAGGAATGCTCAGTTGCAGTCATTCAAATTGGACTCTCTTGCTCTGCAATATCACCGCCAGAGCGGATGCTTATGGATGTTGTTGTCAACAAATTGAAGAAAATTAGAGAATCATATCTCAATTAA

Protein Analysis

1067

Amino Acids

117.34

Weight (kDa)

8.61

Isoelectric Point (pI)

42.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 111 - 150 1.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 159 - 283 3.3e-07 Leucine-rich repeat region
LRR_14 PF23598 204 - 406 8.5e-08 Leucine-rich repeat region
LRR_14 PF23598 538 - 680 1.6e-08 Leucine-rich repeat region
LRR_8 PF13855 622 - 680 1.1e-06 Leucine rich repeat
Pkinase PF00069 788 - 973 1.3e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 790 - 953 2.1e-28 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2304
Acc36I ACCTGC 3 cut(s) 489, 2149, 2293
AccB1I GGYRCC 1 cut(s) 1682
AccB7I CCANNNNNTGG 2 cut(s) 1847, 3001
AccBSI CCGCTC 1 cut(s) 3139
AccI GTMKAC 1 cut(s) 2281
AciI CCGC 7 cut(s) 426, 645, 886, 1016, 1092, 3131, 3139
AclWI GGATC 6 cut(s) 304, 374, 1173, 1186, 1956, 2852
AcoI YGGCCR 1 cut(s) 1431
AcuI CTGAAG 5 cut(s) 606, 625, 1478, 1791, 2076
AfaI GTAC 4 cut(s) 223, 676, 1276, 2603
AfiI CCNNNNNNNGG 8 cut(s) 645, 1025, 1628, 1847, 2060, 2355, 2426, 3001
AflII CTTAAG 1 cut(s) 1510
AflIII ACRYGT 2 cut(s) 287, 2940
AhlI ACTAGT 2 cut(s) 317, 1277
AjnI CCWGG 3 cut(s) 29, 1935, 2917
AjuI GAANNNNNNNTTGG 2 cut(s) 2361, 2393
AleI CACNNNNGTG 2 cut(s) 2739, 2814
Alw21I GWGCWC 4 cut(s) 287, 401, 882, 2215
Alw26I GTCTC 6 cut(s) 106, 633, 1475, 2090, 2329, 2635
Alw44I GTGCAC 1 cut(s) 2211
AlwI GGATC 6 cut(s) 304, 374, 1173, 1186, 1956, 2852
AlwNI CAGNNNCTG 1 cut(s) 2852
Ama87I CYCGRG 2 cut(s) 881, 2169
AoxI GGCC 1 cut(s) 1431
ApaLI GTGCAC 1 cut(s) 2211
ApeKI GCWGC 5 cut(s) 37, 302, 1065, 2121, 3051
Asp700I GAANNNNTTC 3 cut(s) 529, 817, 2068
AspA2I CCTAGG 1 cut(s) 553
AspS9I GGNCC 2 cut(s) 1538, 1757
AsuC2I CCSGG 1 cut(s) 2421
AsuHPI GGTGA 6 cut(s) 214, 587, 2435, 2620, 2828, 3120
AvaI CYCGRG 2 cut(s) 881, 2169
AvaII GGWCC 2 cut(s) 1538, 1757
AvrII CCTAGG 1 cut(s) 553
BaeGI GKGCMC 1 cut(s) 2215
BamHI GGATCC 1 cut(s) 1178
BanI GGYRCC 1 cut(s) 1682
BanII GRGCYC 2 cut(s) 401, 882
BarI GAAGNNNNNNTAC 4 cut(s) 2442, 2474, 2914, 2946
BbsI GAAGAC 3 cut(s) 460, 927, 1512
Bbv12I GWGCWC 4 cut(s) 287, 401, 882, 2215
BbvI GCAGC 5 cut(s) 24, 314, 1077, 2133, 3063
BccI CCATC 8 cut(s) 202, 803, 1555, 1939, 2420, 2869, 2945, 3041
BciT130I CCWGG 3 cut(s) 31, 1937, 2919
BciVI GTATCC 1 cut(s) 1342
BcnI CCSGG 1 cut(s) 2421
BcoDI GTCTC 6 cut(s) 106, 633, 1475, 2090, 2329, 2635
BcuI ACTAGT 2 cut(s) 317, 1277
BfmI CTRYAG 4 cut(s) 38, 300, 519, 2931
BfrI CTTAAG 1 cut(s) 1510
BfuAI ACCTGC 3 cut(s) 489, 2149, 2293
BfuI GTATCC 1 cut(s) 1342
BisI GCNGC 6 cut(s) 38, 303, 887, 1066, 2122, 3052
BlnI CCTAGG 1 cut(s) 553
BlsI GCNGC 6 cut(s) 39, 304, 888, 1067, 2123, 3053
Bme1390I CCNGG 4 cut(s) 31, 1937, 2421, 2919
Bme18I GGWCC 2 cut(s) 1538, 1757
BmeT110I CYCGRG 2 cut(s) 881, 2169
BmgT120I GGNCC 2 cut(s) 1538, 1757
BmiI GGNNCC 4 cut(s) 793, 1180, 1684, 2837
BmrFI CCNGG 4 cut(s) 31, 1937, 2421, 2919
BmrI ACTGGG 2 cut(s) 664, 2195
BmsI GCATC 9 cut(s) 378, 838, 1103, 1407, 2023, 2483, 2644, 2976, 3132
BmuI ACTGGG 2 cut(s) 664, 2195
BpiI GAAGAC 3 cut(s) 460, 927, 1512
BplI GAGNNNNNCTC 2 cut(s) 3068, 3100
BpmI CTGGAG 3 cut(s) 249, 295, 2901
Bpu10I CCTNAGC 1 cut(s) 2106
BpuEI CTTGAG 4 cut(s) 360, 1304, 2519, 2539
BpuMI CCSGG 1 cut(s) 2421
BsaAI YACGTR 3 cut(s) 221, 290, 444
BsaI GGTCTC 2 cut(s) 106, 2090
BsaJI CCNNGG 5 cut(s) 30, 553, 1404, 2419, 3000
Bsc4I CCNNNNNNNGG 8 cut(s) 645, 1025, 1628, 1847, 2060, 2355, 2426, 3001
Bse3DI GCAATG 1 cut(s) 3020
BseBI CCWGG 3 cut(s) 31, 1937, 2919
BseDI CCNNGG 5 cut(s) 30, 553, 1404, 2419, 3000
BseLI CCNNNNNNNGG 8 cut(s) 645, 1025, 1628, 1847, 2060, 2355, 2426, 3001
BseMI GCAATG 1 cut(s) 3020
BseMII CTCAG 4 cut(s) 230, 751, 2346, 3099
BseSI GKGCMC 1 cut(s) 2215
BseXI GCAGC 5 cut(s) 24, 314, 1077, 2133, 3063
BseYI CCCAGC 1 cut(s) 1222
BsgI GTGCAG 1 cut(s) 596
Bsh1285I CGRYCG 1 cut(s) 598
BshFI GGCC 1 cut(s) 1433
BshNI GGYRCC 1 cut(s) 1682
BsiEI CGRYCG 1 cut(s) 598
BsiHKAI GWGCWC 4 cut(s) 287, 401, 882, 2215
BsiHKCI CYCGRG 2 cut(s) 881, 2169
BsiSI CCGG 1 cut(s) 2421
BslFI GGGAC 1 cut(s) 1390
BslI CCNNNNNNNGG 8 cut(s) 645, 1025, 1628, 1847, 2060, 2355, 2426, 3001
BsmAI GTCTC 6 cut(s) 106, 633, 1475, 2090, 2329, 2635
BsmFI GGGAC 1 cut(s) 1390
BsmI GAATGC 3 cut(s) 2501, 2961, 3086
BsnI GGCC 1 cut(s) 1433
Bso31I GGTCTC 2 cut(s) 106, 2090
BsoBI CYCGRG 2 cut(s) 881, 2169
Bsp1286I GDGCHC 4 cut(s) 287, 401, 882, 2215
Bsp1407I TGTACA 1 cut(s) 674
Bsp143I GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
Bsp19I CCATGG 1 cut(s) 3000
BspACI CCGC 7 cut(s) 426, 645, 886, 1016, 1092, 3131, 3139
BspANI GGCC 1 cut(s) 1433
BspCNI CTCAG 4 cut(s) 231, 750, 2345, 3098
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 4 cut(s) 793, 1180, 1684, 2837
BspMAI CTGCAG 2 cut(s) 42, 304
BspMI ACCTGC 3 cut(s) 489, 2149, 2293
BspPI GGATC 6 cut(s) 304, 374, 1173, 1186, 1956, 2852
BspQI GCTCTTC 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 1682
BspTI CTTAAG 1 cut(s) 1510
BspTNI GGTCTC 2 cut(s) 106, 2090
BsrBI CCGCTC 1 cut(s) 3139
BsrDI GCAATG 1 cut(s) 3020
BsrGI TGTACA 1 cut(s) 674
BssECI CCNNGG 5 cut(s) 30, 553, 1404, 2419, 3000
BssMI GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
BssNAI GTATAC 1 cut(s) 2282
BssT1I CCWWGG 3 cut(s) 553, 1404, 3000
Bst1107I GTATAC 1 cut(s) 2282
Bst2UI CCWGG 3 cut(s) 31, 1937, 2919
Bst4CI ACNGT 4 cut(s) 16, 77, 2525, 2738
Bst6I CTCTTC 6 cut(s) 59, 109, 457, 1041, 1935, 2269
BstAFI CTTAAG 1 cut(s) 1510
BstAPI GCANNNNNTGC 2 cut(s) 444, 610
BstAUI TGTACA 1 cut(s) 674
BstBAI YACGTR 3 cut(s) 221, 290, 444
BstC8I GCNNGC 7 cut(s) 216, 236, 502, 611, 2146, 2254, 2551
BstDEI CTNAG 9 cut(s) 239, 737, 842, 1192, 1358, 2009, 2106, 2332, 3085
BstDSI CCRYGG 1 cut(s) 3000
BstENI CCTNNNNNAGG 1 cut(s) 2058
BstKTI GATC 9 cut(s) 299, 340, 382, 490, 841, 1147, 1181, 1951, 2860
BstMAI GTCTC 6 cut(s) 106, 633, 1475, 2090, 2329, 2635
BstMBI GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
BstMCI CGRYCG 1 cut(s) 598
BstMWI GCNNNNNNNGC 5 cut(s) 444, 610, 886, 1009, 2981
BstNI CCWGG 3 cut(s) 31, 1937, 2919
BstNSI RCATGY 3 cut(s) 218, 2158, 2553
BstSCI CCNGG 4 cut(s) 29, 1935, 2419, 2917
BstSFI CTRYAG 4 cut(s) 38, 300, 519, 2931
BstSLI GKGCMC 1 cut(s) 2215
BstV1I GCAGC 5 cut(s) 24, 314, 1077, 2133, 3063
BstV2I GAAGAC 3 cut(s) 460, 927, 1512
BstX2I RGATCY 4 cut(s) 296, 379, 1178, 1948
BstXI CCANNNNNNTGG 1 cut(s) 1004
BstYI RGATCY 4 cut(s) 296, 379, 1178, 1948
BstZ17I GTATAC 1 cut(s) 2282
BsuI GTATCC 1 cut(s) 1342
BsuRI GGCC 1 cut(s) 1433
BtgI CCRYGG 1 cut(s) 3000
BtgZI GCGATG 1 cut(s) 2999
BtsIMutI CAGTG 5 cut(s) 113, 677, 786, 1468, 1767
BveI ACCTGC 3 cut(s) 489, 2149, 2293
Cac8I GCNNGC 7 cut(s) 216, 236, 502, 611, 2146, 2254, 2551
CaiI CAGNNNCTG 1 cut(s) 2852
CciI TCATGA 1 cut(s) 393
Cfr13I GGNCC 2 cut(s) 1538, 1757
Csp6I GTAC 4 cut(s) 222, 675, 1275, 2602
CspCI CAANNNNNGTGG 2 cut(s) 2720, 2755
CviQI GTAC 4 cut(s) 222, 675, 1275, 2602
DdeI CTNAG 9 cut(s) 239, 737, 842, 1192, 1358, 2009, 2106, 2332, 3085
DpnI GATC 9 cut(s) 298, 339, 381, 489, 840, 1146, 1180, 1950, 2859
DpnII GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
EaeI YGGCCR 1 cut(s) 1431
Eam1104I CTCTTC 6 cut(s) 59, 109, 457, 1041, 1935, 2269
EarI CTCTTC 6 cut(s) 59, 109, 457, 1041, 1935, 2269
Ecl136II GAGCTC 2 cut(s) 399, 880
Eco130I CCWWGG 3 cut(s) 553, 1404, 3000
Eco24I GRGCYC 2 cut(s) 401, 882
Eco31I GGTCTC 2 cut(s) 106, 2090
Eco47I GGWCC 2 cut(s) 1538, 1757
Eco53kI GAGCTC 2 cut(s) 399, 880
Eco57I CTGAAG 5 cut(s) 606, 625, 1478, 1791, 2076
Eco88I CYCGRG 2 cut(s) 881, 2169
EcoICRI GAGCTC 2 cut(s) 399, 880
EcoNI CCTNNNNNAGG 1 cut(s) 2058
EcoRII CCWGG 3 cut(s) 29, 1935, 2917
EcoT14I CCWWGG 3 cut(s) 553, 1404, 3000
EcoT22I ATGCAT 1 cut(s) 281
EcoT38I GRGCYC 2 cut(s) 401, 882
ErhI CCWWGG 3 cut(s) 553, 1404, 3000
FalI AAGNNNNNCTT 2 cut(s) 1764, 1796
FaqI GGGAC 1 cut(s) 1390
FauI CCCGC 2 cut(s) 638, 1099
FauNDI CATATG 1 cut(s) 762
FblI GTMKAC 1 cut(s) 2281
Fnu4HI GCNGC 6 cut(s) 38, 303, 887, 1066, 2122, 3052
FriOI GRGCYC 2 cut(s) 401, 882
Fsp4HI GCNGC 6 cut(s) 38, 303, 887, 1066, 2122, 3052
GluI GCNGC 6 cut(s) 38, 303, 887, 1066, 2122, 3052
GsaI CCCAGC 1 cut(s) 1226
GsuI CTGGAG 3 cut(s) 249, 295, 2901
HaeIII GGCC 1 cut(s) 1433
HapII CCGG 1 cut(s) 2421
HincII GTYRAC 4 cut(s) 1752, 2883, 3013, 3163
HindII GTYRAC 4 cut(s) 1752, 2883, 3013, 3163
HindIII AAGCTT 3 cut(s) 1189, 1490, 2502
HpaII CCGG 1 cut(s) 2421
HphI GGTGA 6 cut(s) 214, 587, 2435, 2620, 2828, 3120
Hpy166II GTNNAC 9 cut(s) 675, 677, 1752, 2213, 2282, 2404, 2883, 3013, 3163
Hpy188I TCNGA 7 cut(s) 492, 1497, 1741, 1771, 2335, 2640, 2854
Hpy8I GTNNAC 9 cut(s) 675, 677, 1752, 2213, 2282, 2404, 2883, 3013, 3163
HpyAV CCTTC 6 cut(s) 649, 2054, 2230, 2468, 3027, 3063
HpyCH4III ACNGT 4 cut(s) 16, 77, 2525, 2738
HpyCH4IV ACGT 5 cut(s) 220, 289, 443, 2811, 2942
HpyF10VI GCNNNNNNNGC 5 cut(s) 444, 610, 886, 1009, 2981
HpyF3I CTNAG 9 cut(s) 239, 737, 842, 1192, 1358, 2009, 2106, 2332, 3085
HpySE526I ACGT 5 cut(s) 220, 289, 443, 2811, 2942
Kzo9I GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
LguI GCTCTTC 1 cut(s) 59
LmnI GCTCC 4 cut(s) 34, 81, 211, 2471
Lsp1109I GCAGC 5 cut(s) 24, 314, 1077, 2133, 3063
LweI GCATC 9 cut(s) 378, 838, 1103, 1407, 2023, 2483, 2644, 2976, 3132
MaeII ACGT 5 cut(s) 220, 289, 443, 2811, 2942
MaeIII GTNAC 4 cut(s) 701, 1559, 2816, 2906
MalI GATC 9 cut(s) 298, 339, 381, 489, 840, 1146, 1180, 1950, 2859
MbiI CCGCTC 1 cut(s) 3139
MboI GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
MfeI CAATTG 3 cut(s) 7, 2700, 2751
MflI RGATCY 4 cut(s) 296, 379, 1178, 1948
MhlI GDGCHC 4 cut(s) 287, 401, 882, 2215
MlyI GAGTC 5 cut(s) 474, 2331, 2682, 2858, 3102
MmeI TCCRAC 3 cut(s) 680, 1365, 3054
Mph1103I ATGCAT 1 cut(s) 281
MroXI GAANNNNTTC 3 cut(s) 529, 817, 2068
MslI CAYNNNNRTG 4 cut(s) 290, 2739, 2814, 2984
MspA1I CMGCKG 2 cut(s) 645, 1829
MspCI CTTAAG 1 cut(s) 1510
MspI CCGG 1 cut(s) 2421
MspR9I CCNGG 4 cut(s) 31, 1937, 2421, 2919
MunI CAATTG 3 cut(s) 7, 2700, 2751
Mva1269I GAATGC 3 cut(s) 2501, 2961, 3086
MvaI CCWGG 3 cut(s) 31, 1937, 2919
MwoI GCNNNNNNNGC 5 cut(s) 444, 610, 886, 1009, 2981
NciI CCSGG 1 cut(s) 2421
NcoI CCATGG 1 cut(s) 3000
NdeI CATATG 1 cut(s) 762
NdeII GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
NlaIV GGNNCC 4 cut(s) 793, 1180, 1684, 2837
NmuCI GTSAC 2 cut(s) 701, 2816
NsiI ATGCAT 1 cut(s) 281
NspI RCATGY 3 cut(s) 218, 2158, 2553
OliI CACNNNNGTG 2 cut(s) 2739, 2814
PaeI GCATGC 2 cut(s) 218, 2553
PaeR7I CTCGAG 1 cut(s) 2169
PagI TCATGA 1 cut(s) 393
PciSI GCTCTTC 1 cut(s) 59
PctI GAATGC 3 cut(s) 2501, 2961, 3086
PdmI GAANNNNTTC 3 cut(s) 529, 817, 2068
PfeI GAWTC 9 cut(s) 189, 410, 546, 906, 1294, 1978, 2064, 2345, 3185
PflMI CCANNNNNTGG 2 cut(s) 1847, 3001
PfoI TCCNGGA 1 cut(s) 2917
PkrI GCNGC 6 cut(s) 39, 304, 888, 1067, 2123, 3053
PleI GAGTC 5 cut(s) 473, 2330, 2682, 2857, 3102
PpsI GAGTC 5 cut(s) 473, 2330, 2682, 2857, 3102
Ppu21I YACGTR 3 cut(s) 221, 290, 444
PsiI TTATAA 1 cut(s) 2304
Psp124BI GAGCTC 2 cut(s) 401, 882
Psp6I CCWGG 3 cut(s) 29, 1935, 2917
PspFI CCCAGC 1 cut(s) 1222
PspGI CCWGG 3 cut(s) 29, 1935, 2917
PspN4I GGNNCC 4 cut(s) 793, 1180, 1684, 2837
PspPI GGNCC 2 cut(s) 1538, 1757
PstI CTGCAG 2 cut(s) 42, 304
PstNI CAGNNNCTG 1 cut(s) 2852
PsuI RGATCY 4 cut(s) 296, 379, 1178, 1948
PvuII CAGCTG 1 cut(s) 1829
RsaI GTAC 4 cut(s) 223, 676, 1276, 2603
RsaNI GTAC 4 cut(s) 222, 675, 1275, 2602
RseI CAYNNNNRTG 4 cut(s) 290, 2739, 2814, 2984
SacI GAGCTC 2 cut(s) 401, 882
SapI GCTCTTC 1 cut(s) 59
SatI GCNGC 6 cut(s) 38, 303, 887, 1066, 2122, 3052
Sau3AI GATC 9 cut(s) 296, 337, 379, 487, 838, 1144, 1178, 1948, 2857
Sau96I GGNCC 2 cut(s) 1538, 1757
SchI GAGTC 5 cut(s) 474, 2331, 2682, 2858, 3102
ScrFI CCNGG 4 cut(s) 31, 1937, 2421, 2919
SduI GDGCHC 4 cut(s) 287, 401, 882, 2215
SfaNI GCATC 9 cut(s) 378, 838, 1103, 1407, 2023, 2483, 2644, 2976, 3132
SfcI CTRYAG 4 cut(s) 38, 300, 519, 2931
Sfr274I CTCGAG 1 cut(s) 2169
SinI GGWCC 2 cut(s) 1538, 1757
SlaI CTCGAG 1 cut(s) 2169
SmiMI CAYNNNNRTG 4 cut(s) 290, 2739, 2814, 2984
SmlI CTYRAG 6 cut(s) 375, 1283, 1510, 2169, 2534, 2554
SmoI CTYRAG 6 cut(s) 375, 1283, 1510, 2169, 2534, 2554
SpeI ACTAGT 2 cut(s) 317, 1277
SphI GCATGC 2 cut(s) 218, 2553
SsiI CCGC 7 cut(s) 426, 645, 886, 1016, 1092, 3131, 3139
SspI AATATT 3 cut(s) 961, 1087, 2695
SstI GAGCTC 2 cut(s) 401, 882
StyD4I CCNGG 4 cut(s) 29, 1935, 2419, 2917
StyI CCWWGG 3 cut(s) 553, 1404, 3000
TaaI ACNGT 4 cut(s) 16, 77, 2525, 2738
TaiI ACGT 5 cut(s) 223, 292, 446, 2814, 2945
TaqI TCGA 3 cut(s) 2126, 2170, 2900
TaqII GACCGA 2 cut(s) 88, 584
TatI WGTACW 3 cut(s) 674, 1274, 2601
TauI GCSGC 1 cut(s) 889
TfiI GAWTC 9 cut(s) 189, 410, 546, 906, 1294, 1978, 2064, 2345, 3185
TscAI CASTG 5 cut(s) 120, 677, 793, 1468, 1767
TseFI GTSAC 2 cut(s) 701, 2816
TseI GCWGC 5 cut(s) 37, 302, 1065, 2121, 3051
Tsp45I GTSAC 2 cut(s) 701, 2816
TspGWI ACGGA 1 cut(s) 403
TspRI CASTG 5 cut(s) 120, 677, 793, 1468, 1767
Van91I CCANNNNNTGG 2 cut(s) 1847, 3001
Vha464I CTTAAG 1 cut(s) 1510
VneI GTGCAC 1 cut(s) 2211
VpaK11BI GGWCC 2 cut(s) 1538, 1757
XagI CCTNNNNNAGG 1 cut(s) 2058
XbaI TCTAGA 1 cut(s) 1112
XceI RCATGY 3 cut(s) 218, 2158, 2553
XcmI CCANNNNNNNNNTGG 1 cut(s) 2485
XhoI CTCGAG 1 cut(s) 2169
XmaJI CCTAGG 1 cut(s) 553
XmiI GTMKAC 1 cut(s) 2281
XmnI GAANNNNTTC 3 cut(s) 529, 817, 2068
Zsp2I ATGCAT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.