MD07G1218000.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
29570967 .. 29575320
4354 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1218000.v1.1.491

Sequence Viewer

Length: 3489 bp
ATGTTGGGGTGGGCCGACTCACTGGGCCTTCATTTGGTGCCTGACTATCCGGTCCAATGTTTTAATTTGGATGTTTTTGAGATTTTGGGTTCGTCCCTCGATTCTGCTCCTCGATTCGCTACCCAGAAGATCAGTTCTCAAGGTTCGATGTTTCCTCCTCAACTTCATCCTTACCCCTCACTGATTATTTATTTCGGGTTTTTTGCTCTGCAGATTTCGATCAAATTGCCTGCATTTGAATTATTTTGTAATTTTCGTAATTTGTATTGGGTGGAATTGGCCTTTCTATTCTCTAAAATCTTTGTTAGGGATTGCATTTTGTTTAAATTTTGTGAGTATAAAAAGATTGGGACTTTTTCTTATTTTAAATTATTTACACACAGTTCCAAAGCACTGTGTGTTAAACAGTGGAATTTTGATTCAGGCTGTAGGAATTGGTGCAACTTTATGGGGATAATACTATCACTGCACCTTATTCCTCGACACCTTGGCCTTCTTGAGTCTTCGTTGGAGCATTGCAAATCAGTTTTCCGACTCGATATCATGGTGCTCAGTAATTCGGCTGGTAATTTTTGGCATAATCCATTTGAAAATTTTAGTTGTTTTTGTTGTTGGTTATATTTATTTGTCAAAGTAATGATTTTGGGTTCAATGCTCCATGGTTCACCTTCAGTTGGAAATCTTACTTATCTTACTGGAATCAATTTGAGAGACAACAACTTTCATGGGGAAATTCCTCCAGAAATGGGTCGTCTACAAAGCCTACAATATCTCAACCTCTCTCATAATTCCTTTGGTGGGAAAATTCCAACTAATTTGTCGCAATGCATACAACTAAAATTGCTTAATCTGCAAGCCAATCGGATGATGGAGTCCATTCCAAACCAACTCAGTTCATTGTTGAATTTAAAATATCTACGGCTTGATGGTAACAATCTCACTGGAACTATCCCACCTTGGATAGGAAACTTTTCCTTGTTGAGTAGTCTAATACTTGGCAAGAACAATTTTCAAGGAAGCATACCCAATGAGCTTGGGCATATAGCAGGCTTGGAGGTGTTCGTAGTTGAGAAGAATGATCTATCTGGTATGATCCCATCCCCAATCTATAATATTTCTTCCATATCCACTTTTAGTGTTGCTGTCAACCAGTTGAATGGAGAGCTACCAACAAATCTCGGCACTATGCTTCCTAATCTCGTAGACCTTTACTGCGATGTGAACAAATTCACAGGAAATATTCCCATATCATTGTCAAATGCTTCAAGACTTCAGATGCTTGAACTTTCTCAAAATGGTTTCTCTGGGACAGTCCCTGGTGAGAGTCTAGGAAACTTGCATAGCTTAGTTTGGCTAAACTTTTATGGCAATCAGTTAGGAAATAGAAAAGTTGGTGACCTGAATTTTCTTAGTTTCTTGGCTAACTGCACTAGTTTGGAGCATTTGAGTCTTTTCGATAATAATTTTGGAGGAGAAATTCCGGGATCCATAGCCAACCTTTCGACCCAACTTAATGTTCTTAGTCTGGGGGAAAATTTTATACATGGAAACCTTCCTAAGGGAACTGGAAACCTTATAAACTTGACCGCTTTAGTATTAGAATATAACCAGTTGAGTGGCAGTGTCCCGCATGAAATTGGGAAGCTAGATAAGTTAGTGGAACTGTATTTGGATTTTAACCAATTTTCTGGTTCAATCCCGTCATCCTTTGGTAATATGACTTCATTGTTATACTTGTACATGGACTCAAACAGGTTTGAGGGCAGTATACTTCCAAGTCTTGGAAACTGCCAATACCTATTAGATCTTAACCTTTCCAGTAACAACCTTACGGGCACCATACCTAAAATGCTTATGGAGCTTTCAACCCTTTCAAGTTCTCTAGACCTGTCTGACAATTATTTGACTGGTCCGATGCCCCTTGAGGTGGGTGATTTAGTGCATCTCACGGAGCTAAATGTATTAAGAAACCATTTATTAGGTGAAATCCCGAGCACCCTCGGCAGTTGTACTAGTTTGCAGCGCTTGTGTTTGCAAGGTAATAAGTTTGAAGGAACAATTCCTCAATCTCTTCAGAATTTGAAAGGCTTGGAAAAACTTGATATTTCAAGCAACAACTTGTCTGGGCCGATTCCTGAATTCATAGGCAAGCTTGGTGCTCTCAAGTATCTCAATCTTTCGTATAATGATTTTGAGGGCGAGCTGCCAAAAGATGGTATTTTTGCAAATGCTAGTGGTGTTTTTGTTCTTGGAAATCATAGGCTCTGTGGTGGCATCCCACAATTACATCTACCTTCATGCCCCCCAAAAAAACACCATTCATCTCGCGGACTACATTCCCCAAAAGTAGTCATCCCTATAACCTGTGTATTTGGAATCATAATTGCTCTATCATGCTTCTGTGGTGCTTATTCAATGCTGAAAAAGTCAAGAGATAGACGTGCAACTTCACGTTCTTATAAGGATTGGAAATCAGGTGTCTCGTACTCACAACTAGTTCAATCAACTAACGGGTTCTCTGCGGATAATCTTATTGGTTCAGGAAGTTTTGGTTCTGTTTATAAAGGGGTAATTCCTAGTGATGGAACAATAGTTGCTATTAAGGTATTAAACCTTCAACAACAAGGAGCTTCCAAGAGTTTCATAGATGAATGCAAAGCTTTAAGGAGTATAAGGCATCGTAATCTTCTCAAGATCATAACTGCATGCTCAAGCTTTGATAATCAGGGCAAGGACTTCAAAAGTCTAGTTTTCGAGTTCATGGCAAATGGAAGTCTAGACTCAATGTTGTATCCAAGATGTGAGGAGGAATCTCCAAGCAAAAGAATGAGTTTTATGCAAAGATTGAACATCGCCATTGATGTTGCTTCTGCGTTAGATTATCTCCACCACCATTGTGAAACGGCCATTGTTCATTGTGATCTAAAGCCGAGCAACGTACTTCTTGATGAAGATATGGTAGCCCATGTTGGGGATTTTGGTTTAGCAAGGTTCCTCTTTGAAAAATCAAATGATCCCACCTTCAGTCAAACAATGTCATCTCAGCTAAAGGGTTCTATAGGCTACATTCCTCCAGAATATGGCACAGGAGGCCAAGTTTCCATACTTGGAGATGTTTACAGCTATGGGATACTATTGTTGGAAATGTTCATAGGAAAAAGACCTACCGATGACATGTTCAAAGACGGTCTAAGCATTTACCAATTCGTAGCCATGTCTTTGCCTGACCATGTTATGGACGTCGTTGACCATTCAATTATCCTCGACCTCGAAGCAGATGGTAATGTCAACAATGACATAGTGCGAGAACGAACTCCATCCAGACGTAACGATCGTGGCCCAGTGAAAGAAAAAAAATTAAAGGAATGTTTGGTTTTAGTAATGCAGATAGGACTCTCTTGCTGTGCAATGTCACCAAAGGAGCGGATGCTAATGGACTCGGTTGTTAGAAAAATGAGCACAATCAAAGACTCGTACCTCAAAGTTTAA

Protein Analysis

1163

Amino Acids

128.75

Weight (kDa)

6.51

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 503 - 562 2.9e-06 Leucine rich repeat
LRR_14 PF23598 503 - 620 7.6e-08 Leucine-rich repeat region
LRR_14 PF23598 589 - 728 1.8e-08 Leucine-rich repeat region
LRR_8 PF13855 672 - 731 1.2e-08 Leucine rich repeat
Pkinase PF00069 841 - 1058 2.3e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 842 - 1060 3.7e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1577, 2460, 2562
AasI GACNNNNNNGTC 1 cut(s) 50
AatII GACGTC 1 cut(s) 3243
AccB1I GGYRCC 2 cut(s) 37, 1835
AccB7I CCANNNNNTGG 4 cut(s) 1781, 2213, 3080, 3235
AccBSI CCGCTC 1 cut(s) 3424
AccI GTMKAC 3 cut(s) 754, 1203, 1768
AccII CGCG 1 cut(s) 2328
AciI CCGC 5 cut(s) 1587, 1628, 2328, 2522, 3424
AclWI GGATC 4 cut(s) 1087, 1479, 1492, 3008
AcoI YGGCCR 1 cut(s) 2904
AcuI CTGAAG 4 cut(s) 654, 1256, 2057, 3007
AcyI GRCGYC 1 cut(s) 3240
AdeI CACNNNGTG 1 cut(s) 398
AfaI GTAC 5 cut(s) 1739, 2011, 2486, 2940, 3476
AfeI AGCGCT 1 cut(s) 2024
AflIII ACRYGT 1 cut(s) 3174
AhlI ACTAGT 3 cut(s) 1430, 2012, 2494
AjiI CACGTC 1 cut(s) 2441
AjnI CCWGG 1 cut(s) 1315
AjuI GAANNNNNNNTTGG 2 cut(s) 1500, 1532
AleI CACNNNNGTG 1 cut(s) 2895
Alw21I GWGCWC 4 cut(s) 552, 1997, 2161, 3461
Alw26I GTCTC 2 cut(s) 705, 2485
AlwI GGATC 4 cut(s) 1087, 1479, 1492, 3008
AlwNI CAGNNNCTG 1 cut(s) 1316
Ama87I CYCGRG 1 cut(s) 1990
Aor51HI AGCGCT 1 cut(s) 2024
AoxI GGCC 8 cut(s) 12, 25, 279, 490, 2126, 2904, 3091, 3337
ApeKI GCWGC 2 cut(s) 2020, 2203
Asp700I GAANNNNTTC 2 cut(s) 970, 1226
AspLEI GCGC 1 cut(s) 2025
AspS9I GGNCC 6 cut(s) 12, 25, 52, 1910, 2126, 3338
AsuC2I CCSGG 1 cut(s) 1482
AsuHPI GGTGA 6 cut(s) 657, 1331, 1406, 1943, 1994, 3405
AvaI CYCGRG 1 cut(s) 1990
AvaII GGWCC 2 cut(s) 52, 1910
AxyI CCTNAGG 1 cut(s) 1557
BaeGI GKGCMC 1 cut(s) 1838
BaeI ACNNNNGTAYC 2 cut(s) 3122, 3155
BamHI GGATCC 1 cut(s) 1484
BanI GGYRCC 2 cut(s) 37, 1835
BarI GAAGNNNNNNTAC 4 cut(s) 1705, 1737, 2598, 2630
BbsI GAAGAC 1 cut(s) 495
Bbv12I GWGCWC 4 cut(s) 552, 1997, 2161, 3461
BbvI GCAGC 2 cut(s) 2032, 2190
BccI CCATC 7 cut(s) 862, 920, 1105, 2207, 2576, 3272, 3325
BceAI ACGGC 2 cut(s) 935, 2919
BcgI CGANNNNNNTGC 4 cut(s) 208, 242, 842, 876
BciT130I CCWGG 1 cut(s) 1317
BciVI GTATCC 2 cut(s) 2802, 3123
BcnI CCSGG 1 cut(s) 1482
BcoDI GTCTC 2 cut(s) 705, 2485
BcuI ACTAGT 3 cut(s) 1430, 2012, 2494
BfmI CTRYAG 3 cut(s) 209, 427, 3057
BfoI RGCGCY 1 cut(s) 2026
BfuI GTATCC 2 cut(s) 2802, 3123
BglII AGATCT 1 cut(s) 1804
BisI GCNGC 2 cut(s) 2021, 2204
BlsI GCNGC 2 cut(s) 2022, 2205
Bme1390I CCNGG 2 cut(s) 1317, 1482
Bme18I GGWCC 2 cut(s) 52, 1910
BmeT110I CYCGRG 1 cut(s) 1990
BmgBI CACGTC 1 cut(s) 2441
BmgT120I GGNCC 6 cut(s) 12, 25, 52, 1910, 2126, 3338
BmiI GGNNCC 4 cut(s) 39, 1486, 1837, 2993
BmrFI CCNGG 2 cut(s) 1317, 1482
BmrI ACTGGG 2 cut(s) 32, 3335
BmsI GCATC 6 cut(s) 1266, 1905, 1951, 2283, 2686, 3417
BmuI ACTGGG 2 cut(s) 32, 3335
BpiI GAAGAC 1 cut(s) 495
BpmI CTGGAG 2 cut(s) 723, 3057
BpuEI CTTGAG 6 cut(s) 123, 518, 1943, 2147, 2675, 2695
BpuMI CCSGG 1 cut(s) 1482
BsaBI GATNNNNATC 1 cut(s) 218
BsaHI GRCGYC 1 cut(s) 3240
BsaJI CCNNGG 5 cut(s) 487, 658, 956, 1315, 1999
BsaWI WCCGGW 1 cut(s) 49
BsaXI ACNNNNNCTCC 2 cut(s) 3081, 3111
Bse1I ACTGG 9 cut(s) 27, 700, 946, 1150, 1570, 1609, 1818, 1912, 3341
Bse21I CCTNAGG 1 cut(s) 1557
Bse3DI GCAATG 3 cut(s) 514, 830, 3414
Bse8I GATNNNNATC 1 cut(s) 218
BseBI CCWGG 1 cut(s) 1317
BseDI CCNNGG 5 cut(s) 487, 658, 956, 1315, 1999
BseGI GGATG 9 cut(s) 76, 166, 870, 1097, 1703, 2274, 2352, 3317, 3432
BseJI GATNNNNATC 1 cut(s) 218
BseMI GCAATG 3 cut(s) 514, 830, 3414
BseMII CTCAG 3 cut(s) 565, 904, 3056
BseNI ACTGG 9 cut(s) 27, 700, 946, 1150, 1570, 1609, 1818, 1912, 3341
BseRI GAGGAG 4 cut(s) 99, 147, 1485, 2819
BseSI GKGCMC 1 cut(s) 1838
BseXI GCAGC 2 cut(s) 2032, 2190
BsgI GTGCAG 2 cut(s) 452, 1411
Bsh1236I CGCG 1 cut(s) 2328
Bsh1285I CGRYCG 1 cut(s) 3334
BshFI GGCC 8 cut(s) 14, 27, 281, 492, 2128, 2906, 3093, 3339
BshNI GGYRCC 2 cut(s) 37, 1835
BsiEI CGRYCG 1 cut(s) 3334
BsiHKAI GWGCWC 4 cut(s) 552, 1997, 2161, 3461
BsiHKCI CYCGRG 1 cut(s) 1990
BsiSI CCGG 2 cut(s) 50, 1481
BslFI GGGAC 5 cut(s) 79, 364, 1298, 1321, 1610
BsmAI GTCTC 2 cut(s) 705, 2485
BsmFI GGGAC 5 cut(s) 79, 364, 1298, 1321, 1610
BsmI GAATGC 1 cut(s) 2657
BsnI GGCC 8 cut(s) 14, 27, 281, 492, 2128, 2906, 3093, 3339
BsoBI CYCGRG 1 cut(s) 1990
Bsp1286I GDGCHC 5 cut(s) 552, 1838, 1997, 2161, 3461
Bsp1407I TGTACA 1 cut(s) 1737
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 5 cut(s) 1587, 1628, 2328, 2522, 3424
BspANI GGCC 8 cut(s) 14, 27, 281, 492, 2128, 2906, 3093, 3339
BspCNI CTCAG 3 cut(s) 564, 903, 3055
BspFNI CGCG 1 cut(s) 2328
BspLI GGNNCC 4 cut(s) 39, 1486, 1837, 2993
BspMAI CTGCAG 1 cut(s) 213
BspPI GGATC 4 cut(s) 1087, 1479, 1492, 3008
BspT107I GGYRCC 2 cut(s) 37, 1835
BsrBI CCGCTC 1 cut(s) 3424
BsrDI GCAATG 3 cut(s) 514, 830, 3414
BsrGI TGTACA 1 cut(s) 1737
BsrI ACTGG 9 cut(s) 27, 700, 946, 1150, 1570, 1609, 1818, 1912, 3341
BssECI CCNNGG 5 cut(s) 487, 658, 956, 1315, 1999
BssNAI GTATAC 1 cut(s) 1769
BssNI GRCGYC 1 cut(s) 3240
BssT1I CCWWGG 3 cut(s) 487, 658, 956
Bst1107I GTATAC 1 cut(s) 1769
Bst2UI CCWGG 1 cut(s) 1317
Bst4CI ACNGT 6 cut(s) 383, 396, 408, 1312, 1665, 3188
Bst6I CTCTTC 1 cut(s) 2076
BstACI GRCGYC 1 cut(s) 3240
BstAUI TGTACA 1 cut(s) 1737
BstC8I GCNNGC 6 cut(s) 231, 855, 1048, 2150, 2201, 2707
BstDEI CTNAG 8 cut(s) 551, 890, 1345, 1409, 1520, 1557, 3042, 3191
BstDSI CCRYGG 1 cut(s) 658
BstEII GGTNACC 1 cut(s) 1394
BstENI CCTNNNNNAGG 2 cut(s) 960, 1556
BstF5I GGATG 9 cut(s) 76, 166, 870, 1097, 1703, 2274, 2352, 3317, 3432
BstFNI CGCG 1 cut(s) 2328
BstH2I RGCGCY 1 cut(s) 2026
BstHHI GCGC 1 cut(s) 2025
BstMAI GTCTC 2 cut(s) 705, 2485
BstMCI CGRYCG 1 cut(s) 3334
BstMWI GCNNNNNNNGC 4 cut(s) 850, 1858, 2001, 3090
BstNI CCWGG 1 cut(s) 1317
BstNSI RCATGY 2 cut(s) 2709, 3178
BstPI GGTNACC 1 cut(s) 1394
BstSCI CCNGG 2 cut(s) 1315, 1480
BstSFI CTRYAG 3 cut(s) 209, 427, 3057
BstSLI GKGCMC 1 cut(s) 1838
BstUI CGCG 1 cut(s) 2328
BstV1I GCAGC 2 cut(s) 2032, 2190
BstV2I GAAGAC 1 cut(s) 495
BstX2I RGATCY 2 cut(s) 1484, 1804
BstXI CCANNNNNNTGG 3 cut(s) 1157, 1616, 1688
BstYI RGATCY 2 cut(s) 1484, 1804
BstZ17I GTATAC 1 cut(s) 1769
Bsu36I CCTNAGG 1 cut(s) 1557
BsuI GTATCC 2 cut(s) 2802, 3123
BsuRI GGCC 8 cut(s) 14, 27, 281, 492, 2128, 2906, 3093, 3339
BtgI CCRYGG 1 cut(s) 658
BtgZI GCGATG 2 cut(s) 1230, 2836
BtrI CACGTC 1 cut(s) 2441
BtsCI GGATG 9 cut(s) 76, 166, 870, 1097, 1703, 2274, 2352, 3317, 3432
BtsI GCAGTG 2 cut(s) 464, 1627
BtsIMutI CAGTG 8 cut(s) 20, 179, 392, 413, 464, 939, 1627, 3348
Cac8I GCNNGC 6 cut(s) 231, 855, 1048, 2150, 2201, 2707
CaiI CAGNNNCTG 1 cut(s) 1316
CfoI GCGC 1 cut(s) 2025
Cfr13I GGNCC 6 cut(s) 12, 25, 52, 1910, 2126, 3338
Csp6I GTAC 5 cut(s) 1738, 2010, 2485, 2939, 3475
CspCI CAANNNNNGTGG 2 cut(s) 2876, 2911
CviQI GTAC 5 cut(s) 1738, 2010, 2485, 2939, 3475
DdeI CTNAG 8 cut(s) 551, 890, 1345, 1409, 1520, 1557, 3042, 3191
DraI TTTAAA 3 cut(s) 325, 367, 909
DraIII CACNNNGTG 1 cut(s) 398
DrdI GACNNNNNNGTC 1 cut(s) 50
DseDI GACNNNNNNGTC 1 cut(s) 50
EaeI YGGCCR 1 cut(s) 2904
Eam1104I CTCTTC 1 cut(s) 2076
EarI CTCTTC 1 cut(s) 2076
Eco130I CCWWGG 3 cut(s) 487, 658, 956
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 2 cut(s) 52, 1910
Eco47III AGCGCT 1 cut(s) 2024
Eco57I CTGAAG 4 cut(s) 654, 1256, 2057, 3007
Eco81I CCTNAGG 1 cut(s) 1557
Eco88I CYCGRG 1 cut(s) 1990
Eco91I GGTNACC 1 cut(s) 1394
EcoNI CCTNNNNNAGG 2 cut(s) 960, 1556
EcoO65I GGTNACC 1 cut(s) 1394
EcoRI GAATTC 1 cut(s) 2138
EcoRII CCWGG 1 cut(s) 1315
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 3 cut(s) 487, 658, 956
EcoT22I ATGCAT 1 cut(s) 830
ErhI CCWWGG 3 cut(s) 487, 658, 956
FaqI GGGAC 5 cut(s) 79, 364, 1298, 1321, 1610
FauI CCCGC 1 cut(s) 1635
FblI GTMKAC 3 cut(s) 754, 1203, 1768
Fnu4HI GCNGC 2 cut(s) 2021, 2204
FokI GGATG 9 cut(s) 83, 153, 877, 1084, 1690, 2261, 2339, 3304, 3439
Fsp4HI GCNGC 2 cut(s) 2021, 2204
GlaI GCGC 1 cut(s) 2024
GluI GCNGC 2 cut(s) 2021, 2204
GsuI CTGGAG 2 cut(s) 723, 3057
HaeII RGCGCY 1 cut(s) 2026
HaeIII GGCC 8 cut(s) 14, 27, 281, 492, 2128, 2906, 3093, 3339
HapII CCGG 2 cut(s) 50, 1481
HhaI GCGC 1 cut(s) 2025
Hin1I GRCGYC 1 cut(s) 3240
Hin6I GCGC 1 cut(s) 2023
HinP1I GCGC 1 cut(s) 2023
HincII GTYRAC 3 cut(s) 1147, 3247, 3289
HindII GTYRAC 3 cut(s) 1147, 3247, 3289
HindIII AAGCTT 3 cut(s) 2150, 2658, 2713
HpaII CCGG 2 cut(s) 50, 1481
HphI GGTGA 6 cut(s) 657, 1331, 1406, 1943, 1994, 3405
Hpy166II GTNNAC 9 cut(s) 665, 755, 1147, 1204, 1222, 1769, 3118, 3247, 3289
Hpy188I TCNGA 6 cut(s) 533, 864, 1275, 1894, 1914, 2076
Hpy8I GTNNAC 9 cut(s) 665, 755, 1147, 1204, 1222, 1769, 3118, 3247, 3289
Hpy99I CGWCG 1 cut(s) 3245
HpyAV CCTTC 8 cut(s) 38, 503, 678, 1562, 2045, 2304, 2624, 3031
HpyCH4III ACNGT 6 cut(s) 383, 396, 408, 1312, 1665, 3188
HpyCH4IV ACGT 5 cut(s) 2440, 2452, 2937, 3240, 3325
HpyF10VI GCNNNNNNNGC 4 cut(s) 850, 1858, 2001, 3090
HpyF3I CTNAG 8 cut(s) 551, 890, 1345, 1409, 1520, 1557, 3042, 3191
HpySE526I ACGT 5 cut(s) 2440, 2452, 2937, 3240, 3325
Hsp92I GRCGYC 1 cut(s) 3240
HspAI GCGC 1 cut(s) 2023
LmnI GCTCC 8 cut(s) 112, 511, 660, 1438, 1858, 1951, 2627, 3421
Lsp1109I GCAGC 2 cut(s) 2032, 2190
LweI GCATC 6 cut(s) 1266, 1905, 1951, 2283, 2686, 3417
MaeII ACGT 5 cut(s) 2440, 2452, 2937, 3240, 3325
MaeIII GTNAC 5 cut(s) 929, 1394, 1820, 3326, 3411
MbiI CCGCTC 1 cut(s) 3424
MboII GAAGA 7 cut(s) 139, 495, 1084, 1110, 2063, 2678, 2963
MflI RGATCY 2 cut(s) 1484, 1804
MhlI GDGCHC 5 cut(s) 552, 1838, 1997, 2161, 3461
MmeI TCCRAC 5 cut(s) 489, 556, 655, 833, 3120
Mph1103I ATGCAT 1 cut(s) 830
MroXI GAANNNNTTC 2 cut(s) 970, 1226
MslI CAYNNNNRTG 1 cut(s) 2895
MspI CCGG 2 cut(s) 50, 1481
MspR9I CCNGG 2 cut(s) 1317, 1482
Mva1269I GAATGC 1 cut(s) 2657
MvaI CCWGG 1 cut(s) 1317
MvnI CGCG 1 cut(s) 2328
MwoI GCNNNNNNNGC 4 cut(s) 850, 1858, 2001, 3090
NciI CCSGG 1 cut(s) 1482
NcoI CCATGG 1 cut(s) 658
NlaIV GGNNCC 4 cut(s) 39, 1486, 1837, 2993
NmeAIII GCCGAG 3 cut(s) 1158, 1980, 2955
NmuCI GTSAC 2 cut(s) 1394, 3411
NsiI ATGCAT 1 cut(s) 830
NspI RCATGY 2 cut(s) 2709, 3178
OliI CACNNNNGTG 1 cut(s) 2895
PaeI GCATGC 1 cut(s) 2709
PciI ACATGT 1 cut(s) 3174
PcsI WCGNNNNNNNCGW 1 cut(s) 3331
PctI GAATGC 1 cut(s) 2657
PdmI GAANNNNTTC 2 cut(s) 970, 1226
PfeI GAWTC 7 cut(s) 101, 114, 419, 699, 2131, 2376, 2810
PflMI CCANNNNNTGG 4 cut(s) 1781, 2213, 3080, 3235
PfoI TCCNGGA 1 cut(s) 1480
PkrI GCNGC 2 cut(s) 2022, 2205
Ple19I CGATCG 1 cut(s) 3334
PscI ACATGT 1 cut(s) 3174
PsiI TTATAA 3 cut(s) 1577, 2460, 2562
Psp6I CCWGG 1 cut(s) 1315
PspEI GGTNACC 1 cut(s) 1394
PspGI CCWGG 1 cut(s) 1315
PspN4I GGNNCC 4 cut(s) 39, 1486, 1837, 2993
PspPI GGNCC 6 cut(s) 12, 25, 52, 1910, 2126, 3338
PstI CTGCAG 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 1316
PsuI RGATCY 2 cut(s) 1484, 1804
PvuI CGATCG 1 cut(s) 3334
RsaI GTAC 5 cut(s) 1739, 2011, 2486, 2940, 3476
RsaNI GTAC 5 cut(s) 1738, 2010, 2485, 2939, 3475
RseI CAYNNNNRTG 1 cut(s) 2895
SatI GCNGC 2 cut(s) 2021, 2204
Sau96I GGNCC 6 cut(s) 12, 25, 52, 1910, 2126, 3338
ScrFI CCNGG 2 cut(s) 1317, 1482
SduI GDGCHC 5 cut(s) 552, 1838, 1997, 2161, 3461
SfaNI GCATC 6 cut(s) 1266, 1905, 1951, 2283, 2686, 3417
SfcI CTRYAG 3 cut(s) 209, 427, 3057
SinI GGWCC 2 cut(s) 52, 1910
SmiMI CAYNNNNRTG 1 cut(s) 2895
SmlI CTYRAG 6 cut(s) 138, 497, 1922, 2162, 2690, 2710
SmoI CTYRAG 6 cut(s) 138, 497, 1922, 2162, 2690, 2710
SpeI ACTAGT 3 cut(s) 1430, 2012, 2494
SphI GCATGC 1 cut(s) 2709
SsiI CCGC 5 cut(s) 1587, 1628, 2328, 2522, 3424
SspI AATATT 2 cut(s) 1114, 1240
StyD4I CCNGG 2 cut(s) 1315, 1480
StyI CCWWGG 3 cut(s) 487, 658, 956
TaaI ACNGT 6 cut(s) 383, 396, 408, 1312, 1665, 3188
TaiI ACGT 5 cut(s) 2443, 2455, 2940, 3243, 3328
TatI WGTACW 2 cut(s) 1737, 2009
TfiI GAWTC 7 cut(s) 101, 114, 419, 699, 2131, 2376, 2810
TscAI CASTG 8 cut(s) 27, 186, 399, 413, 471, 946, 1627, 3348
TseFI GTSAC 2 cut(s) 1394, 3411
TseI GCWGC 2 cut(s) 2020, 2203
Tsp45I GTSAC 2 cut(s) 1394, 3411
TspGWI ACGGA 1 cut(s) 1964
TspRI CASTG 8 cut(s) 27, 186, 399, 413, 471, 946, 1627, 3348
Van91I CCANNNNNTGG 4 cut(s) 1781, 2213, 3080, 3235
VpaK11BI GGWCC 2 cut(s) 52, 1910
XagI CCTNNNNNAGG 2 cut(s) 960, 1556
XbaI TCTAGA 2 cut(s) 1882, 2776
XceI RCATGY 2 cut(s) 2709, 3178
XcmI CCANNNNNNNNNTGG 1 cut(s) 865
XmiI GTMKAC 3 cut(s) 754, 1203, 1768
XmnI GAANNNNTTC 2 cut(s) 970, 1226
ZraI GACGTC 1 cut(s) 3241
Zsp2I ATGCAT 1 cut(s) 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.