MD04G1150300.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
23925587 .. 23929095
3509 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1150300.v1.1.491

Sequence Viewer

Length: 3072 bp
ATGGTGCATTCACGTACCTGTTCTTGCAAGGTTTTCTTCAAATTTCTTCTCCTTTTATGCATGGCCACAGGTCTGCAATCTGCAACACTTTCCACTTATAGAAATGAATCCGATCACCTGGCGTTGCTAGACTTCAAGAAACGAATTTCTCAAGATCCTCTCCAAATCATGAGCTCATGGAATACTTCAATCCATTTCTGCAGTTGGGTAGGGGTTACATGCAACCACGCCAACAAAAGAGTCATGATTTTGAACCTGGAAGCTCAAAAACTGGTAGGCTCCTTATCACCTTTCATTGGAAATCTTACTTATCTTACTGGAATTAACCTGATAAAGAACAACTTTCATGGTGAAATTCCTCAAGAAATTGGCCGCCTACTGAACCTACAACATCTCAACCTTTCTTTCAATTCTTTCAGTGGAAAGATTCCAAGTAATATATCTCATTGTACACAACTAAGAGTTTTTCTGCTAACAATCTTACCGGAACTATCCCCGCTTGGATTGGAAACTTTTCATCTTTGGAAATTCTATCGCTTGCTATCAATAATTTTACCCAATGAGCTCGGACGTCTAACAAACTTGAGAAGGTTTGTACTCTGGGGAAATAATTTGTCTGGTACGGTACCTGCTTCACTCTATAATATATCATCCATATACTATTTCACTGTTGCTTCAAACCAGCTGCACGGAGAGATACCACCAGATGTCGGCATTACGCTTCCTAATCTCGAAGTATTTGCCGGTGGGGTCAACAAGTTCACCGGAACTATTCCACTATCATTGGCAAATGCTTCTAGACTTCAAGTGCTTGATTTTGCTACAAATGGTCTCACCGGGACACTCCCTGCTGAAAACCTTGCAACCTTGCAAAGCTTAGTTAGACTGAACTTTGATGAAAACAGACTAGCAAGGGGGATAACCGATGGCAAGGATTTTCTTGGTCTCCTCGCTAATTGTACGAGTCTAGAGGTGTTGGGTCTTATGGGAAATTATTTTGGAGGAGAATTGCCCGGATCAGTAGCCAACCTTTCTACGCAACTGAGAATTCTTACTTTGGGGTCAAATTTGATGCATGGCAGCATCCCCAATGACATTGGAAATCTTGTCAATCTGACTAGTCTAGGACTGGAAGGAAACTATTTGGGTGGTCGTGTCCCCGATGGAATTGGGAAGCTTCAGAAGTTACAGGGACTGCATTTGAATGTTAACAAATTTTCTGGGAGAATCCCTTCTTCTTTAGGTAACTTGACGTCATTGACAAAGCTCTTCATGGAAGAGAACATGTTTCAGGGAAGCATACCTCCAAGCCTAGGAAACTGCCAAAAGTTACTGGTACTTAATCTTTCAAGTAACCGTCTAACCGGCAAGATACCTAAAGAGCTTATTGGACTTTCATCCCTTTCAATCTCTTTGTCCATGTCGAACAATTCTTTGATTGGTTCGCTACCATCTGAAGTGGGAAAGTTGGTAAGTCTCGGAGAGCTAGATGTATCTAGAAACAAGTTAACAGGTCAAATCCCAGAAGCCTTGGGAAGTTGTACCAGTTTGGAGCGCCTTCACTTGGAAGGTAATGAATTTGAAGGAACAATCCCCCTATCTCTTATGAATTTAAGAGGCTTAGAAGAAATGGATATTTCGCACAATAACTTATCTGGGCAGATTCCTTACTTTCTTGGCAAGTTTAGAGTTCTTAAGGAACTCGATCTTTCTCATAATAATTTTGAGGGTGAATTACCTAAAGAAGGGATATTCTCAAATGCAAGTGGCATCTTAATTCTTGGAAACGAGAAGCTCTGTGGTGGCATCCCACAGTTACGTCTACCTGTATGCTCCATCAAAAAGCCCCATTCATCTCGAGGACTACGAGGCCTAAAAGTGATCATCCCTATAGCTTGTTCTCTTCCGTTCATAATTGCTCTATCATATTATATTGCCGCTTGTTCCATGGCGAAAAGGTCGAGAGGAAAATCGGTTACTTCACGTCCTCATGAAGATTGGAAATCAGGTTTCTCGTACTCAGAACTTGTTCAAGCAACTAACGGGTTCTCTGCGGACAATCTGATTGGTTCGGGAAGTTTTGGTTCTGTTTACAAAGGAGTAATCCCTAGTAATGGTGCAACAGTTGCTATTAAGGTATTCAACCTTCAACAACAAGGAGCTTCCAAGAGCTTTATTGATGAATGCAAAGCTTTGAGAACTATAAGGCATCGTAATCTCCTCAAGATTGTAACTGCCTGCTCAAGTATTGATAATCAGGGTAATGACTTCAAAAGTCTAGTTATGGAGTTCATGGAAAATGGAAGTCTAGACCTCTGGCTGCATCGTGGAGACAATGAACAACCAGAAGGTAAGAGACTGAGTATTATCCAAAGACTGAATATTGCCATTGATGTTGCTTCTGCCTTAGATTATCTACACAACCATTGTGAGATGTGCATTGTTCATTGTGATCTAAAGCCAAGTAACGTACTTCTTGATGAAGATATGGTTGCCCATGTTGGTGACTTTGGTTTAGCAAGGTTCCTCGTTGAAGCAGCGAATAATCCCACGACTCCCACACCAAATCAAACTGTCTCAGTTGGGCTAAAGGGTTCCATAGGATACATTCCTCCGGAGTATGGCATGGGAAGCCAAGTTTCGATACTGGGAGATGTTTATAGTTATGGGATATTGTTGGTCGAAATGTTCACAGGAAAAGGTCCAACTGATGACATGTTCAAAGATGGTCTAAGCATTCACCAATTCACTGCCATGGCTTTGCCTGACCACGTCAATGACGTAGTTGAGCCCTCATTGCTCCTCGAAACAGATGACGAGGATGATGACAGTGACAAAGATGATGCATACGGCAATAAAATACAGGAAAGACCAACAGCCAGATACAAGGATCCCGGCCCGGACAAAGCAAAAAGATTGGAGGAATGCTTGAATTCAGTGATACAGATTGGGATCTCGTGCTCCGCAATATCACCAGGAGAGCGGATGCTTATGAATGTGGTTGTCAACAAAATGAATGCAATCAGAGACTCATATCTCAACTTAAGGACAGGTGGAAGAAGAAGAAGATGA

Protein Analysis

1024

Amino Acids

111.85

Weight (kDa)

7.09

Isoelectric Point (pI)

35.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 75 4.7e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 83 - 303 2.3e-07 Leucine-rich repeat region
LRR_14 PF23598 346 - 451 9.5e-11 Leucine-rich repeat region
LRR_14 PF23598 434 - 574 1.2e-09 Leucine-rich repeat region
Pkinase PF00069 685 - 908 1.8e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 686 - 908 2.4e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 574, 1256
Acc36I ACCTGC 1 cut(s) 637
Acc65I GGTACC 1 cut(s) 625
AccB1I GGYRCC 1 cut(s) 625
AccBSI CCGCTC 1 cut(s) 2983
AccI GTMKAC 1 cut(s) 1822
AccIII TCCGGA 1 cut(s) 2614
AciI CCGC 6 cut(s) 373, 497, 1938, 2054, 2964, 2983
AclWI GGATC 5 cut(s) 149, 1024, 2885, 2898, 2960
AcoI YGGCCR 2 cut(s) 63, 370
AcuI CTGAAG 2 cut(s) 1163, 1476
AcyI GRCGYC 2 cut(s) 571, 1253
AfiI CCNNNNNNNGG 7 cut(s) 296, 710, 1313, 1564, 1745, 2114, 2621
AflII CTTAAG 2 cut(s) 1694, 3043
AflIII ACRYGT 2 cut(s) 1284, 2715
AhlI ACTAGT 1 cut(s) 1118
AjiI CACGTC 2 cut(s) 1985, 2773
AjnI CCWGG 3 cut(s) 117, 255, 2974
Alw21I GWGCWC 3 cut(s) 176, 567, 2963
Alw26I GTCTC 7 cut(s) 836, 950, 1481, 2325, 2350, 2581, 3021
AlwI GGATC 5 cut(s) 149, 1024, 2885, 2898, 2960
AlwNI CAGNNNCTG 1 cut(s) 1195
Ama87I CYCGRG 1 cut(s) 1857
Aor13HI TCCGGA 1 cut(s) 2614
AoxI GGCC 4 cut(s) 63, 370, 1870, 2896
ApeKI GCWGC 4 cut(s) 685, 1080, 2320, 2537
Asp700I GAANNNNTTC 3 cut(s) 513, 1231, 2028
Asp718I GGTACC 1 cut(s) 625
AspA2I CCTAGG 1 cut(s) 1312
AspLEI GCGC 1 cut(s) 1557
AspS9I GGNCC 2 cut(s) 2702, 2897
AsuC2I CCSGG 4 cut(s) 838, 1014, 2895, 2900
AsuHPI GGTGA 9 cut(s) 107, 279, 362, 754, 826, 1742, 2516, 2732, 2964
AvaI CYCGRG 1 cut(s) 1857
AvaII GGWCC 1 cut(s) 2702
AvrII CCTAGG 1 cut(s) 1312
BalI TGGCCA 1 cut(s) 65
BamHI GGATCC 1 cut(s) 2890
BanI GGYRCC 1 cut(s) 625
BanII GRGCYC 3 cut(s) 176, 567, 2793
BarI GAAGNNNNNNTAC 2 cut(s) 2130, 2162
BauI CACGAG 1 cut(s) 2956
Bbv12I GWGCWC 3 cut(s) 176, 567, 2963
BbvI GCAGC 4 cut(s) 672, 1092, 2307, 2549
BccI CCATC 5 cut(s) 920, 1157, 1459, 1844, 2720
BceAI ACGGC 1 cut(s) 2866
BcgI CGANNNNNNTGC 2 cut(s) 722, 756
BciT130I CCWGG 3 cut(s) 119, 257, 2976
BciVI GTATCC 1 cut(s) 2597
BclI TGATCA 1 cut(s) 1881
BcnI CCSGG 4 cut(s) 838, 1014, 2895, 2900
BcoDI GTCTC 7 cut(s) 836, 950, 1481, 2325, 2350, 2581, 3021
BcuI ACTAGT 1 cut(s) 1118
BfmI CTRYAG 2 cut(s) 199, 1890
BfoI RGCGCY 1 cut(s) 1558
BfrI CTTAAG 2 cut(s) 1694, 3043
BfuAI ACCTGC 1 cut(s) 637
BfuI GTATCC 1 cut(s) 2597
BisI GCNGC 6 cut(s) 373, 686, 1081, 1938, 2321, 2538
BlnI CCTAGG 1 cut(s) 1312
BlsI GCNGC 6 cut(s) 374, 687, 1082, 1939, 2322, 2539
Bme1390I CCNGG 7 cut(s) 119, 257, 838, 1014, 2895, 2900, 2976
Bme18I GGWCC 1 cut(s) 2702
BmeT110I CYCGRG 1 cut(s) 1857
BmgBI CACGTC 2 cut(s) 1985, 2773
BmgT120I GGNCC 2 cut(s) 2702, 2897
BmiI GGNNCC 5 cut(s) 280, 627, 2525, 2596, 2892
BmrFI CCNGG 7 cut(s) 119, 257, 838, 1014, 2895, 2900, 2976
BmrI ACTGGG 1 cut(s) 2657
BmsI GCATC 8 cut(s) 1062, 1092, 1779, 1815, 2218, 2332, 2833, 2976
BmuI ACTGGG 1 cut(s) 2657
BpuEI CTTGAG 5 cut(s) 135, 345, 604, 2207, 2227
BpuMI CCSGG 4 cut(s) 838, 1014, 2895, 2900
BsaAI YACGTR 1 cut(s) 14
BsaBI GATNNNNATC 1 cut(s) 2951
BsaHI GRCGYC 2 cut(s) 571, 1253
BsaI GGTCTC 2 cut(s) 836, 950
BsaJI CCNNGG 4 cut(s) 1312, 1530, 1947, 2754
BsaWI WCCGGW 3 cut(s) 484, 764, 2614
Bsc4I CCNNNNNNNGG 7 cut(s) 296, 710, 1313, 1564, 1745, 2114, 2621
Bse118I RCCGGY 2 cut(s) 743, 1364
Bse1I ACTGG 6 cut(s) 276, 322, 1134, 1338, 1545, 2652
Bse3DI GCAATG 1 cut(s) 2795
Bse8I GATNNNNATC 1 cut(s) 2951
BseAI TCCGGA 1 cut(s) 2614
BseBI CCWGG 3 cut(s) 119, 257, 2976
BseDI CCNNGG 4 cut(s) 1312, 1530, 1947, 2754
BseGI GGATG 7 cut(s) 650, 1083, 1397, 1806, 1884, 2827, 2991
BseJI GATNNNNATC 1 cut(s) 2951
BseLI CCNNNNNNNGG 7 cut(s) 296, 710, 1313, 1564, 1745, 2114, 2621
BseMI GCAATG 1 cut(s) 2795
BseMII CTCAG 4 cut(s) 1034, 2034, 2351, 2592
BseNI ACTGG 6 cut(s) 276, 322, 1134, 1338, 1545, 2652
BseRI GAGGAG 4 cut(s) 938, 1017, 2210, 2792
BseXI GCAGC 4 cut(s) 672, 1092, 2307, 2549
BsgI GTGCAG 1 cut(s) 671
BshFI GGCC 4 cut(s) 65, 372, 1872, 2898
BshNI GGYRCC 1 cut(s) 625
BsiHKAI GWGCWC 3 cut(s) 176, 567, 2963
BsiHKCI CYCGRG 1 cut(s) 1857
BsiSI CCGG 9 cut(s) 485, 744, 765, 837, 1014, 1365, 2615, 2895, 2900
BslFI GGGAC 3 cut(s) 853, 1142, 1206
BslI CCNNNNNNNGG 7 cut(s) 296, 710, 1313, 1564, 1745, 2114, 2621
BsmAI GTCTC 7 cut(s) 836, 950, 1481, 2325, 2350, 2581, 3021
BsmFI GGGAC 3 cut(s) 853, 1142, 1206
BsmI GAATGC 5 cut(s) 7, 2189, 2736, 2930, 3022
BsnI GGCC 4 cut(s) 65, 372, 1872, 2898
Bso31I GGTCTC 2 cut(s) 836, 950
BsoBI CYCGRG 1 cut(s) 1857
Bsp1286I GDGCHC 4 cut(s) 176, 567, 2793, 2963
Bsp13I TCCGGA 1 cut(s) 2614
Bsp1407I TGTACA 1 cut(s) 449
Bsp143I GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
Bsp19I CCATGG 2 cut(s) 1947, 2754
BspACI CCGC 6 cut(s) 373, 497, 1938, 2054, 2964, 2983
BspANI GGCC 4 cut(s) 65, 372, 1872, 2898
BspCNI CTCAG 4 cut(s) 1035, 2033, 2352, 2591
BspEI TCCGGA 1 cut(s) 2614
BspHI TCATGA 3 cut(s) 168, 243, 1990
BspLI GGNNCC 5 cut(s) 280, 627, 2525, 2596, 2892
BspMAI CTGCAG 1 cut(s) 203
BspMI ACCTGC 1 cut(s) 637
BspPI GGATC 5 cut(s) 149, 1024, 2885, 2898, 2960
BspQI GCTCTTC 1 cut(s) 1274
BspT107I GGYRCC 1 cut(s) 625
BspTI CTTAAG 2 cut(s) 1694, 3043
BspTNI GGTCTC 2 cut(s) 836, 950
BsrBI CCGCTC 1 cut(s) 2983
BsrDI GCAATG 1 cut(s) 2795
BsrFI RCCGGY 2 cut(s) 743, 1364
BsrGI TGTACA 1 cut(s) 449
BsrI ACTGG 6 cut(s) 276, 322, 1134, 1338, 1545, 2652
BssAI RCCGGY 2 cut(s) 743, 1364
BssECI CCNNGG 4 cut(s) 1312, 1530, 1947, 2754
BssMI GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
BssNI GRCGYC 2 cut(s) 571, 1253
BssSI CACGAG 1 cut(s) 2956
BssT1I CCWWGG 4 cut(s) 1312, 1530, 1947, 2754
Bst2BI CACGAG 1 cut(s) 2956
Bst2UI CCWGG 3 cut(s) 119, 257, 2976
Bst4CI ACNGT 7 cut(s) 625, 670, 1358, 1815, 2125, 2575, 2831
Bst6I CTCTTC 3 cut(s) 1272, 1274, 1908
BstACI GRCGYC 2 cut(s) 571, 1253
BstAFI CTTAAG 2 cut(s) 1694, 3043
BstAPI GCANNNNNTGC 1 cut(s) 2126
BstAUI TGTACA 1 cut(s) 449
BstBAI YACGTR 1 cut(s) 14
BstC8I GCNNGC 2 cut(s) 539, 2239
BstDEI CTNAG 9 cut(s) 458, 877, 1043, 1621, 2020, 2360, 2407, 2578, 2732
BstDSI CCRYGG 2 cut(s) 1947, 2754
BstENI CCTNNNNNAGG 1 cut(s) 1743
BstF5I GGATG 7 cut(s) 650, 1083, 1397, 1806, 1884, 2827, 2991
BstH2I RGCGCY 1 cut(s) 1558
BstHHI GCGC 1 cut(s) 1557
BstKTI GATC 8 cut(s) 115, 157, 1019, 1708, 1884, 2455, 2893, 2955
BstMAI GTCTC 7 cut(s) 836, 950, 1481, 2325, 2350, 2581, 3021
BstMBI GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
BstMWI GCNNNNNNNGC 3 cut(s) 2126, 2631, 2797
BstNI CCWGG 3 cut(s) 119, 257, 2976
BstNSI RCATGY 3 cut(s) 222, 1288, 2719
BstSCI CCNGG 7 cut(s) 117, 255, 836, 1012, 2893, 2898, 2974
BstSFI CTRYAG 2 cut(s) 199, 1890
BstV1I GCAGC 4 cut(s) 672, 1092, 2307, 2549
BstX2I RGATCY 3 cut(s) 154, 2890, 2952
BstYI RGATCY 3 cut(s) 154, 2890, 2952
BsuI GTATCC 1 cut(s) 2597
BsuRI GGCC 4 cut(s) 65, 372, 1872, 2898
BtgI CCRYGG 2 cut(s) 1947, 2754
BtrI CACGTC 2 cut(s) 1985, 2773
BtsCI GGATG 7 cut(s) 650, 1083, 1397, 1806, 1884, 2827, 2991
BtsI GCAGTG 1 cut(s) 2748
BtsIMutI CAGTG 5 cut(s) 424, 666, 2748, 2836, 2943
BveI ACCTGC 1 cut(s) 637
Cac8I GCNNGC 2 cut(s) 539, 2239
CaiI CAGNNNCTG 1 cut(s) 1195
CciI TCATGA 3 cut(s) 168, 243, 1990
CfoI GCGC 1 cut(s) 1557
Cfr10I RCCGGY 2 cut(s) 743, 1364
Cfr13I GGNCC 2 cut(s) 2702, 2897
CspCI CAANNNNNGTGG 2 cut(s) 765, 800
DdeI CTNAG 9 cut(s) 458, 877, 1043, 1621, 2020, 2360, 2407, 2578, 2732
DpnI GATC 8 cut(s) 114, 156, 1018, 1707, 1883, 2454, 2892, 2954
DpnII GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
EaeI YGGCCR 2 cut(s) 63, 370
Eam1104I CTCTTC 3 cut(s) 1272, 1274, 1908
EarI CTCTTC 3 cut(s) 1272, 1274, 1908
Ecl136II GAGCTC 2 cut(s) 174, 565
Eco130I CCWWGG 4 cut(s) 1312, 1530, 1947, 2754
Eco147I AGGCCT 1 cut(s) 1872
Eco24I GRGCYC 3 cut(s) 176, 567, 2793
Eco31I GGTCTC 2 cut(s) 836, 950
Eco47I GGWCC 1 cut(s) 2702
Eco53kI GAGCTC 2 cut(s) 174, 565
Eco57I CTGAAG 2 cut(s) 1163, 1476
Eco88I CYCGRG 1 cut(s) 1857
EcoICRI GAGCTC 2 cut(s) 174, 565
EcoNI CCTNNNNNAGG 1 cut(s) 1743
EcoRI GAATTC 2 cut(s) 1047, 2932
EcoRII CCWGG 3 cut(s) 117, 255, 2974
EcoT14I CCWWGG 4 cut(s) 1312, 1530, 1947, 2754
EcoT22I ATGCAT 3 cut(s) 62, 1077, 2848
EcoT38I GRGCYC 3 cut(s) 176, 567, 2793
ErhI CCWWGG 4 cut(s) 1312, 1530, 1947, 2754
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 326, 358
FaqI GGGAC 3 cut(s) 853, 1142, 1206
FauI CCCGC 1 cut(s) 504
FbaI TGATCA 1 cut(s) 1881
FblI GTMKAC 1 cut(s) 1822
Fnu4HI GCNGC 6 cut(s) 373, 686, 1081, 1938, 2321, 2538
FokI GGATG 7 cut(s) 637, 1070, 1384, 1793, 1871, 2834, 2998
FriOI GRGCYC 3 cut(s) 176, 567, 2793
Fsp4HI GCNGC 6 cut(s) 373, 686, 1081, 1938, 2321, 2538
GlaI GCGC 1 cut(s) 1556
GluI GCNGC 6 cut(s) 373, 686, 1081, 1938, 2321, 2538
HaeII RGCGCY 1 cut(s) 1558
HaeIII GGCC 4 cut(s) 65, 372, 1872, 2898
HapII CCGG 9 cut(s) 485, 744, 765, 837, 1014, 1365, 2615, 2895, 2900
HhaI GCGC 1 cut(s) 1557
Hin1I GRCGYC 2 cut(s) 571, 1253
Hin6I GCGC 1 cut(s) 1555
HinP1I GCGC 1 cut(s) 1555
HincII GTYRAC 4 cut(s) 754, 1210, 1509, 3007
HindII GTYRAC 4 cut(s) 754, 1210, 1509, 3007
HindIII AAGCTT 3 cut(s) 874, 1175, 2190
HinfI GANTC 8 cut(s) 107, 240, 427, 964, 1227, 1663, 2554, 3029
HpaI GTTAAC 2 cut(s) 1210, 1509
HpaII CCGG 9 cut(s) 485, 744, 765, 837, 1014, 1365, 2615, 2895, 2900
HphI GGTGA 9 cut(s) 107, 279, 362, 754, 826, 1742, 2516, 2732, 2964
Hpy166II GTNNAC 9 cut(s) 452, 754, 762, 1210, 1509, 1823, 2092, 2691, 3007
Hpy188I TCNGA 9 cut(s) 112, 569, 1116, 1182, 1456, 1481, 2023, 2064, 3026
Hpy8I GTNNAC 9 cut(s) 452, 754, 762, 1210, 1509, 1823, 2092, 2691, 3007
HpyAV CCTTC 9 cut(s) 582, 1127, 1242, 1562, 1568, 1577, 1739, 2156, 2342
HpyCH4III ACNGT 7 cut(s) 625, 670, 1358, 1815, 2125, 2575, 2831
HpyCH4IV ACGT 8 cut(s) 13, 571, 1253, 1819, 1984, 2469, 2772, 2781
HpyF10VI GCNNNNNNNGC 3 cut(s) 2126, 2631, 2797
HpyF3I CTNAG 9 cut(s) 458, 877, 1043, 1621, 2020, 2360, 2407, 2578, 2732
HpySE526I ACGT 8 cut(s) 13, 571, 1253, 1819, 1984, 2469, 2772, 2781
Hsp92I GRCGYC 2 cut(s) 571, 1253
HspAI GCGC 1 cut(s) 1555
Kpn2I TCCGGA 1 cut(s) 2614
KpnI GGTACC 1 cut(s) 629
Ksp22I TGATCA 1 cut(s) 1881
KspAI GTTAAC 2 cut(s) 1210, 1509
Kzo9I GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
LguI GCTCTTC 1 cut(s) 1274
LmnI GCTCC 6 cut(s) 284, 1552, 1838, 2159, 2805, 2966
Lsp1109I GCAGC 4 cut(s) 672, 1092, 2307, 2549
LweI GCATC 8 cut(s) 1062, 1092, 1779, 1815, 2218, 2332, 2833, 2976
MaeII ACGT 8 cut(s) 13, 571, 1253, 1819, 1984, 2469, 2772, 2781
MalI GATC 8 cut(s) 114, 156, 1018, 1707, 1883, 2454, 2892, 2954
MbiI CCGCTC 1 cut(s) 2983
MboI GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
MflI RGATCY 3 cut(s) 154, 2890, 2952
MhlI GDGCHC 4 cut(s) 176, 567, 2793, 2963
MlsI TGGCCA 1 cut(s) 65
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 4 cut(s) 249, 973, 2548, 3023
MmeI TCCRAC 1 cut(s) 2729
Mox20I TGGCCA 1 cut(s) 65
Mph1103I ATGCAT 3 cut(s) 62, 1077, 2848
MroI TCCGGA 1 cut(s) 2614
MroXI GAANNNNTTC 3 cut(s) 513, 1231, 2028
MscI TGGCCA 1 cut(s) 65
MseI TTAA 9 cut(s) 324, 1209, 1341, 1508, 1613, 1695, 1775, 2133, 3044
MslI CAYNNNNRTG 4 cut(s) 1203, 2502, 2753, 2775
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 685
MspCI CTTAAG 2 cut(s) 1694, 3043
MspI CCGG 9 cut(s) 485, 744, 765, 837, 1014, 1365, 2615, 2895, 2900
MspR9I CCNGG 7 cut(s) 119, 257, 838, 1014, 2895, 2900, 2976
Mva1269I GAATGC 5 cut(s) 7, 2189, 2736, 2930, 3022
MvaI CCWGG 3 cut(s) 119, 257, 2976
MwoI GCNNNNNNNGC 3 cut(s) 2126, 2631, 2797
NciI CCSGG 4 cut(s) 838, 1014, 2895, 2900
NcoI CCATGG 2 cut(s) 1947, 2754
NdeII GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
NlaIV GGNNCC 5 cut(s) 280, 627, 2525, 2596, 2892
NmuCI GTSAC 2 cut(s) 2504, 2831
NsiI ATGCAT 3 cut(s) 62, 1077, 2848
NspI RCATGY 3 cut(s) 222, 1288, 2719
PaeR7I CTCGAG 1 cut(s) 1857
PagI TCATGA 3 cut(s) 168, 243, 1990
PceI AGGCCT 1 cut(s) 1872
PciI ACATGT 2 cut(s) 1284, 2715
PciSI GCTCTTC 1 cut(s) 1274
PcsI WCGNNNNNNNCGW 2 cut(s) 1864, 2778
PctI GAATGC 5 cut(s) 7, 2189, 2736, 2930, 3022
PdmI GAANNNNTTC 3 cut(s) 513, 1231, 2028
PfeI GAWTC 4 cut(s) 107, 427, 1227, 1663
PflFI GACNNNGTC 1 cut(s) 2771
PkrI GCNGC 6 cut(s) 374, 687, 1082, 1939, 2322, 2539
PleI GAGTC 4 cut(s) 248, 972, 2548, 3023
PpsI GAGTC 4 cut(s) 248, 972, 2548, 3023
Ppu21I YACGTR 1 cut(s) 14
PscI ACATGT 2 cut(s) 1284, 2715
Psp124BI GAGCTC 2 cut(s) 176, 567
Psp6I CCWGG 3 cut(s) 117, 255, 2974
PspGI CCWGG 3 cut(s) 117, 255, 2974
PspN4I GGNNCC 5 cut(s) 280, 627, 2525, 2596, 2892
PspPI GGNCC 2 cut(s) 2702, 2897
PstI CTGCAG 1 cut(s) 203
PstNI CAGNNNCTG 1 cut(s) 1195
PsuI RGATCY 3 cut(s) 154, 2890, 2952
PsyI GACNNNGTC 1 cut(s) 2771
PvuII CAGCTG 1 cut(s) 685
RseI CAYNNNNRTG 4 cut(s) 1203, 2502, 2753, 2775
SacI GAGCTC 2 cut(s) 176, 567
SapI GCTCTTC 1 cut(s) 1274
SaqAI TTAA 9 cut(s) 324, 1209, 1341, 1508, 1613, 1695, 1775, 2133, 3044
SatI GCNGC 6 cut(s) 373, 686, 1081, 1938, 2321, 2538
Sau3AI GATC 8 cut(s) 112, 154, 1016, 1705, 1881, 2452, 2890, 2952
Sau96I GGNCC 2 cut(s) 2702, 2897
SchI GAGTC 4 cut(s) 249, 973, 2548, 3023
ScrFI CCNGG 7 cut(s) 119, 257, 838, 1014, 2895, 2900, 2976
SduI GDGCHC 4 cut(s) 176, 567, 2793, 2963
SfaNI GCATC 8 cut(s) 1062, 1092, 1779, 1815, 2218, 2332, 2833, 2976
SfcI CTRYAG 2 cut(s) 199, 1890
Sfr274I CTCGAG 1 cut(s) 1857
SinI GGWCC 1 cut(s) 2702
SlaI CTCGAG 1 cut(s) 1857
SmiMI CAYNNNNRTG 4 cut(s) 1203, 2502, 2753, 2775
SmlI CTYRAG 8 cut(s) 150, 360, 583, 1694, 1857, 2222, 2242, 3043
SmoI CTYRAG 8 cut(s) 150, 360, 583, 1694, 1857, 2222, 2242, 3043
SpeI ACTAGT 1 cut(s) 1118
SseBI AGGCCT 1 cut(s) 1872
SsiI CCGC 6 cut(s) 373, 497, 1938, 2054, 2964, 2983
SspI AATATT 1 cut(s) 2383
SstI GAGCTC 2 cut(s) 176, 567
StuI AGGCCT 1 cut(s) 1872
StyD4I CCNGG 7 cut(s) 117, 255, 836, 1012, 2893, 2898, 2974
StyI CCWWGG 4 cut(s) 1312, 1530, 1947, 2754
TaaI ACNGT 7 cut(s) 625, 670, 1358, 1815, 2125, 2575, 2831
TaiI ACGT 8 cut(s) 16, 574, 1256, 1822, 1987, 2472, 2775, 2784
TaqI TCGA 8 cut(s) 732, 1424, 1704, 1858, 1961, 2642, 2682, 2805
TatI WGTACW 2 cut(s) 449, 595
TauI GCSGC 2 cut(s) 375, 1940
TfiI GAWTC 4 cut(s) 107, 427, 1227, 1663
Tru1I TTAA 9 cut(s) 324, 1209, 1341, 1508, 1613, 1695, 1775, 2133, 3044
Tru9I TTAA 9 cut(s) 324, 1209, 1341, 1508, 1613, 1695, 1775, 2133, 3044
TscAI CASTG 5 cut(s) 424, 673, 2755, 2836, 2943
TseFI GTSAC 2 cut(s) 2504, 2831
TseI GCWGC 4 cut(s) 685, 1080, 2320, 2537
Tsp45I GTSAC 2 cut(s) 2504, 2831
TspGWI ACGGA 2 cut(s) 705, 1896
TspRI CASTG 5 cut(s) 424, 673, 2755, 2836, 2943
Tth111I GACNNNGTC 1 cut(s) 2771
Vha464I CTTAAG 2 cut(s) 1694, 3043
VpaK11BI GGWCC 1 cut(s) 2702
XagI CCTNNNNNAGG 1 cut(s) 1743
XbaI TCTAGA 4 cut(s) 797, 967, 1496, 2308
XceI RCATGY 3 cut(s) 222, 1288, 2719
XhoI CTCGAG 1 cut(s) 1857
XmaJI CCTAGG 1 cut(s) 1312
XmiI GTMKAC 1 cut(s) 1822
XmnI GAANNNNTTC 3 cut(s) 513, 1231, 2028
ZraI GACGTC 2 cut(s) 572, 1254
Zsp2I ATGCAT 3 cut(s) 62, 1077, 2848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.