Rw0G010620

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00452
Physical Location & Seq
Forward (+)
196497 .. 199783
3287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G010620.1

Sequence Viewer

Length: 3117 bp
ATGAAGGGGAATTCACTATCAAATTGTAGGTGGTTTTTGCACAAATTCCTTCCTGTGTTCATTGTTTTATGCATGAGCACAGGTCTAAAATCTGCAACACTACCAAATTTTGGAAATGAATCTGATCGTCTGGCACTGCTAGACTTCAAGAAAAGAATCACTGAAGATCCTCTCCATATCATGAGCTCATGGAATGAATCCATGCATTTCTGCAAAGAGTGTGACTTGAACTTGCAAGCTCAAAAGTTGGCTGGCTCCATACCACCTTCCATAGGGAATCTTACTCATCTCACTGGAATCAACTTGATAAACAACAACTTTTATGGTGAAATTCCTCAGGAAATGGGTTGTCTCTTGCGCCTGCAATATCTCAACATGTCTCAAAACTCCTTCAGTGGGAAAATTCCGACTAATATATCTCACTGTACGCAGCTGACAATGATTGATGTTTTTTCCAATAAACTCATTGGGACAATTCCCGACCAACTCAGTTCATTGTTGAAATTAACTGTGTTATGGATTGGTCGGAACAATCTCACTGGAACCATCCCACGTTGGATTGGGAACTTTTCTTCATTGTTTGCACTTTCTCTTGGTGAAAACAACTTGCAAGGAAGCATACCCGATGAGCTGGGGCGTTTAACTGCTTTGCAGAGATTCATACTTACCTCAAATAATCTTTCTGGTATGATTCCTTCTTCGATATATAACATTTCCTCCATATACTATTTCACTGTTACTCAGAATCAACTGCATGGGGAAATCCCACAAAACATTGGCATTACTCTTCCTAATCTGGAGGTATTTGCCGGAGGTGCCAACAAGTTCACAGGAACTATTCCTGTGTCCTTGTCAAATGCTTCTCAGCTATCCATTCTTGAATTTTCCCGAAATAGTTTTACTGGGAAACTCCCTGCTGAAAGTCTTGGGCGTTTGAAAAGGTTAGTTAGACTATACTTTGACTTGAACAGACTGGGAAGTGGTCAAGCTGGTGGCCTGAATTTTCTCAATTTCCTGACTAATTGTACTAGTCTTGAGGTGTTGGGTCTTAGCTATAATCGCTTTGGAGGAGAATTACCAGCATCCATAGCCAACCTTTCTACCCAGCTAAAAGTTCTTACTCTGGGGGGAAATTTGATACATGGAAGCCTCCCTACTGGTATTGGAAATCTGGTAAACTTGACACTTCTGGGAATTGAACAAAACTACATTGGTGGTCGTCTCCCTGATGTAATTGGGAAGCTTCACAAGTTAGAAGGACTGCATTTGAATCTGAACAGATTTTCAGGGCCAATCCCATTCTCCCTAGGTAACTTGACTTCAGTGACAAGGCTCTTCATGGAGGGGAATAGGTTTCAGGGAAGCATACCTCCAAGTCTTGGGAACTGCAAAAATCTATTGATACTCAACCTTTCTAGTAACAATCTAAACGGCACAATACCTAGAGAGGTAGTGGCGATTAAATCCCTTTCGATTTCTTTGACAATGTCTAACAACTCTTTGACTGGTTCACTACCATCTGAAGTGGGTGGTTTGGTAAACCTTGCAGAGCTAGACATATCAGGAAACAAATTATCGGGTGAAATCTCCGAAACCCTTGGCAGTTGTATTAGTTTGGAGCGCCTGCTTTTGAAAGCTAATGAATTCAGTGGACATATTCCTCAGTCTATGGAAAAGCTGAGAGGCTTGGAAGAGTTGGATATTTCACGCAATAACTTATCTGGCCAGGTTCCTGAATTTGTAGGCAAGTTTCGAGCTCTCAAGTATCTCAATCTTTCTCACAATGATTTTGAGGGTGAATTGCCTAAAGAAGGAATCTTTTCAAATGCAACTGGTATCTCAGTGCTCGGAAATGATAAGCTCTGTGGTGGAATTCCAGAATTAGTTCTACCTGCATGTTCCAGCAGAAAGCCTCCTTCATCGAGAGGTCTACTTGCCCCAAAAGTGATAATCCCTCTAACTAGTGCAATTGCATTAATAATTGCTCTTTCCTGCTTGGTTGCTGCACGTTCAATGATGAAAAAGCCAAGAGGCAGACCTCTGACTTCATCTTCTCATAATGATTCATATCCAAGTATCTCTTACTCGGAACTTGTTCAGTCAACTAATGGGTTTTCTGTGGACAATTTGATTGGTTCAGGAAGCTTTGGTTCTGTATACAAAGGATTACTCAGTAGTACTGGAATGGTAGTTGCTGTTAAGGTATTAAACCTTCAACAACAAGGAGCTTCAAAGAGTTTCATTGATGAATGCAGAGCTCTAAGAAGTATAAGGCACCGCAATCTTCTGAAGATCATAACTACTTGCTCAAGCACCGACAATCAGGGTAACGACTTCAAAAGTATAGTTTTCAATTTCATGGCAAATGGAAGTCTAGATCCTTGGCTGCACGCTAGAGAAGACGACGGATCTCAAAGTAAGAGATTGAGCCTTATCCAAAGGCTCAATATTGCCATTGATGTTGCTTGCGCATTAGATTACCTACACGACGGTTGTGAAACATCCATTGTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTCGATGAGTATATGGTAGCCCATGTTGGTGACTTTGGTTTAGCAAGCTTCCTCTTCGAAGCATCAAATAATCATTCCAAAAGTCAGACCATGTCAGCTAGGCTAAAGGGTTCCATAGGCTACATTCCTCCTGAATATGGCATGGGATGTCAAGTTTCCATTCTGGGAGATATCTATAGCTATGGGATTCTATTGCTAGAAATGTTCACAGGGAAAAGGCCAACGGACGAAATGTTCAAAGATGGTCTAAGCATTCACCAGTTCACAGCCATGGCTTTCCCTGACCGTGTCATGGACATAGTTGACACTTCATTGCTCCTGGAAACAGATGAGGATAAGGATGATGATGACAAATACAGCAATGATATACAAGAAAGGCCAATAGCCGGGTATCAAGATATAGGCCTAGTGAAAGCAAGAAGATTGGAGGAATGCTTGGTTTCAGTGATGCAGATTGGTCTCTCATGCTCCACAGTATCACCAAGTGAGCGCATTCTCATGAATGTGGTTGTGAACAAGATGACTGCAATTAGAGATTCCTATCTCAAATTGACCAAGACCAAGTTTGTCACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1038

Amino Acids

113.25

Weight (kDa)

7.51

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 114 - 321 7.6e-12 Leucine-rich repeat region
LRR_8 PF13855 168 - 227 2.8e-07 Leucine rich repeat
LRR_14 PF23598 335 - 547 2.9e-13 Leucine-rich repeat region
LRR_14 PF23598 457 - 595 4e-07 Leucine-rich repeat region
LRR_8 PF13855 538 - 597 1.7e-07 Leucine rich repeat
Pkinase PF00069 706 - 929 3.4e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 707 - 927 1.2e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2470
Acc36I ACCTGC 1 cut(s) 1900
AccB1I GGYRCC 2 cut(s) 815, 2274
AccB7I CCANNNNNTGG 2 cut(s) 110, 1379
AccI GTMKAC 2 cut(s) 1930, 2157
AciI CCGC 1 cut(s) 2278
AclWI GGATC 3 cut(s) 161, 2372, 2416
AcoI YGGCCR 1 cut(s) 1723
AcuI CTGAAG 5 cut(s) 183, 376, 1305, 1542, 2309
AdeI CACNNNGTG 1 cut(s) 3026
AfaI GTAC 3 cut(s) 427, 1027, 2179
AfiI CCNNNNNNNGG 8 cut(s) 110, 272, 396, 1379, 1811, 2678, 2833, 2927
AflIII ACRYGT 1 cut(s) 375
AhlI ACTAGT 2 cut(s) 1028, 1961
AjnI CCWGG 2 cut(s) 1725, 2859
AloI GAACNNNNNNTCC 2 cut(s) 2759, 2791
Alw21I GWGCWC 5 cut(s) 80, 188, 1759, 1848, 2260
Alw26I GTCTC 4 cut(s) 356, 384, 1226, 3005
AlwI GGATC 3 cut(s) 161, 2372, 2416
AoxI GGCC 6 cut(s) 994, 1289, 1723, 2759, 2918, 2944
ApeKI GCWGC 3 cut(s) 430, 2003, 2386
AseI ATTAAT 1 cut(s) 1976
Asp700I GAANNNNTTC 3 cut(s) 1819, 1884, 2094
AspA2I CCTAGG 1 cut(s) 1306
AspLEI GCGC 4 cut(s) 360, 1623, 2471, 3033
AspS9I GGNCC 1 cut(s) 1289
AsuC2I CCSGG 1 cut(s) 2929
AsuHPI GGTGA 8 cut(s) 338, 608, 1592, 1808, 2582, 2789, 3012, 3103
AsuII TTCGAA 1 cut(s) 2598
AvrII CCTAGG 1 cut(s) 1306
AxyI CCTNAGG 1 cut(s) 336
BalI TGGCCA 1 cut(s) 1725
BanI GGYRCC 2 cut(s) 815, 2274
BanII GRGCYC 3 cut(s) 188, 1759, 2260
BarI GAAGNNNNNNTAC 8 cut(s) 679, 711, 1138, 1170, 1303, 1335, 2196, 2228
BbsI GAAGAC 1 cut(s) 2406
Bbv12I GWGCWC 5 cut(s) 80, 188, 1759, 1848, 2260
BbvI GCAGC 3 cut(s) 442, 1990, 2373
BccI CCATC 3 cut(s) 554, 1525, 2777
BceAI ACGGC 1 cut(s) 1447
BciT130I CCWGG 2 cut(s) 1727, 2861
BcnI CCSGG 1 cut(s) 2929
BcoDI GTCTC 4 cut(s) 356, 384, 1226, 3005
BcuI ACTAGT 2 cut(s) 1028, 1961
BfmI CTRYAG 1 cut(s) 2716
BfoI RGCGCY 1 cut(s) 1624
BfuAI ACCTGC 1 cut(s) 1900
BisI GCNGC 3 cut(s) 431, 2004, 2387
BlnI CCTAGG 1 cut(s) 1306
BlsI GCNGC 3 cut(s) 432, 2005, 2388
BmcAI AGTACT 1 cut(s) 2179
Bme1390I CCNGG 3 cut(s) 1727, 2861, 2929
BmgT120I GGNCC 1 cut(s) 1289
BmiI GGNNCC 6 cut(s) 256, 544, 817, 1731, 2276, 2653
BmrFI CCNGG 3 cut(s) 1727, 2861, 2929
BmrI ACTGGG 2 cut(s) 912, 983
BmsI GCATC 3 cut(s) 1091, 2612, 2979
BmuI ACTGGG 2 cut(s) 912, 983
BpiI GAAGAC 1 cut(s) 2406
BpmI CTGGAG 1 cut(s) 818
Bpu14I TTCGAA 1 cut(s) 2598
BpuEI CTTGAG 3 cut(s) 1055, 1745, 2293
BpuMI CCSGG 1 cut(s) 2929
BsaBI GATNNNNATC 2 cut(s) 2067, 3081
BsaI GGTCTC 1 cut(s) 3005
BsaJI CCNNGG 4 cut(s) 1306, 1597, 2381, 2811
BsaXI ACNNNNNCTCC 2 cut(s) 701, 731
Bsc4I CCNNNNNNNGG 8 cut(s) 110, 272, 396, 1379, 1811, 2678, 2833, 2927
Bse1I ACTGG 9 cut(s) 298, 544, 907, 978, 1162, 1510, 1837, 2185, 2800
Bse21I CCTNAGG 1 cut(s) 336
Bse3DI GCAATG 3 cut(s) 2539, 2852, 2908
Bse8I GATNNNNATC 2 cut(s) 2067, 3081
BseBI CCWGG 2 cut(s) 1727, 2861
BseDI CCNNGG 4 cut(s) 1306, 1597, 2381, 2811
BseGI GGATG 5 cut(s) 546, 1082, 2501, 2693, 2887
BseJI GATNNNNATC 2 cut(s) 2067, 3081
BseLI CCNNNNNNNGG 8 cut(s) 110, 272, 396, 1379, 1811, 2678, 2833, 2927
BseMI GCAATG 3 cut(s) 2539, 2852, 2908
BseMII CTCAG 8 cut(s) 350, 502, 755, 878, 1670, 1676, 1854, 2185
BseNI ACTGG 9 cut(s) 298, 544, 907, 978, 1162, 1510, 1837, 2185, 2800
BseRI GAGGAG 1 cut(s) 1083
BseXI GCAGC 3 cut(s) 442, 1990, 2373
BseYI CCCAGC 2 cut(s) 631, 1104
BsgI GTGCAG 2 cut(s) 1989, 2372
BshFI GGCC 6 cut(s) 996, 1291, 1725, 2761, 2920, 2946
BshNI GGYRCC 2 cut(s) 815, 2274
BsiHKAI GWGCWC 5 cut(s) 80, 188, 1759, 1848, 2260
BsiSI CCGG 2 cut(s) 810, 2928
BslFI GGGAC 1 cut(s) 484
BslI CCNNNNNNNGG 8 cut(s) 110, 272, 396, 1379, 1811, 2678, 2833, 2927
BsmAI GTCTC 4 cut(s) 356, 384, 1226, 3005
BsmBI CGTCTC 1 cut(s) 1226
BsmFI GGGAC 1 cut(s) 484
BsmI GAATGC 4 cut(s) 2255, 2793, 2978, 3033
BsnI GGCC 6 cut(s) 996, 1291, 1725, 2761, 2920, 2946
Bso31I GGTCTC 1 cut(s) 3005
Bsp119I TTCGAA 1 cut(s) 2598
Bsp1286I GDGCHC 5 cut(s) 80, 188, 1759, 1848, 2260
Bsp143I GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
Bsp19I CCATGG 1 cut(s) 2811
BspACI CCGC 1 cut(s) 2278
BspANI GGCC 6 cut(s) 996, 1291, 1725, 2761, 2920, 2946
BspCNI CTCAG 8 cut(s) 349, 501, 754, 877, 1671, 1675, 1853, 2184
BspHI TCATGA 2 cut(s) 180, 3039
BspLI GGNNCC 6 cut(s) 256, 544, 817, 1731, 2276, 2653
BspMI ACCTGC 1 cut(s) 1900
BspPI GGATC 3 cut(s) 161, 2372, 2416
BspQI GCTCTTC 1 cut(s) 1340
BspT104I TTCGAA 1 cut(s) 2598
BspT107I GGYRCC 2 cut(s) 815, 2274
BspTNI GGTCTC 1 cut(s) 3005
BsrDI GCAATG 3 cut(s) 2539, 2852, 2908
BsrI ACTGG 9 cut(s) 298, 544, 907, 978, 1162, 1510, 1837, 2185, 2800
BssECI CCNNGG 4 cut(s) 1306, 1597, 2381, 2811
BssMI GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
BssNAI GTATAC 1 cut(s) 2158
BssT1I CCWWGG 4 cut(s) 1306, 1597, 2381, 2811
Bst1107I GTATAC 1 cut(s) 2158
Bst2UI CCWGG 2 cut(s) 1727, 2861
Bst4CI ACNGT 6 cut(s) 425, 511, 736, 2492, 2828, 3016
Bst6I CTCTTC 4 cut(s) 792, 1340, 1686, 2600
BstBI TTCGAA 1 cut(s) 2598
BstC8I GCNNGC 7 cut(s) 237, 253, 362, 1625, 2391, 2467, 2587
BstDSI CCRYGG 1 cut(s) 2811
BstENI CCTNNNNNAGG 2 cut(s) 270, 1809
BstF5I GGATG 5 cut(s) 546, 1082, 2501, 2693, 2887
BstH2I RGCGCY 1 cut(s) 1624
BstHHI GCGC 4 cut(s) 360, 1623, 2471, 3033
BstKTI GATC 6 cut(s) 127, 169, 2295, 2380, 2411, 2521
BstMAI GTCTC 4 cut(s) 356, 384, 1226, 3005
BstMBI GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
BstMWI GCNNNNNNNGC 3 cut(s) 815, 1059, 1088
BstNI CCWGG 2 cut(s) 1727, 2861
BstNSI RCATGY 2 cut(s) 379, 1899
BstSCI CCNGG 3 cut(s) 1725, 2859, 2927
BstSFI CTRYAG 1 cut(s) 2716
BstV1I GCAGC 3 cut(s) 442, 1990, 2373
BstV2I GAAGAC 1 cut(s) 2406
BstX2I RGATCY 3 cut(s) 166, 2377, 2408
BstYI RGATCY 3 cut(s) 166, 2377, 2408
BstZ17I GTATAC 1 cut(s) 2158
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 6 cut(s) 996, 1291, 1725, 2761, 2920, 2946
BtgI CCRYGG 1 cut(s) 2811
BtsCI GGATG 5 cut(s) 546, 1082, 2501, 2693, 2887
BtsI GCAGTG 1 cut(s) 134
BveI ACCTGC 1 cut(s) 1900
Cac8I GCNNGC 7 cut(s) 237, 253, 362, 1625, 2391, 2467, 2587
CciI TCATGA 2 cut(s) 180, 3039
CfoI GCGC 4 cut(s) 360, 1623, 2471, 3033
Cfr13I GGNCC 1 cut(s) 1289
Csp6I GTAC 3 cut(s) 426, 1026, 2178
CviQI GTAC 3 cut(s) 426, 1026, 2178
DpnI GATC 6 cut(s) 126, 168, 2294, 2379, 2410, 2520
DpnII GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
DraIII CACNNNGTG 1 cut(s) 3026
EaeI YGGCCR 1 cut(s) 1723
Eam1104I CTCTTC 4 cut(s) 792, 1340, 1686, 2600
EarI CTCTTC 4 cut(s) 792, 1340, 1686, 2600
Ecl136II GAGCTC 3 cut(s) 186, 1757, 2258
Eco130I CCWWGG 4 cut(s) 1306, 1597, 2381, 2811
Eco147I AGGCCT 1 cut(s) 2946
Eco24I GRGCYC 3 cut(s) 188, 1759, 2260
Eco31I GGTCTC 1 cut(s) 3005
Eco32I GATATC 1 cut(s) 2713
Eco53kI GAGCTC 3 cut(s) 186, 1757, 2258
Eco57I CTGAAG 5 cut(s) 183, 376, 1305, 1542, 2309
Eco81I CCTNAGG 1 cut(s) 336
EcoICRI GAGCTC 3 cut(s) 186, 1757, 2258
EcoNI CCTNNNNNAGG 2 cut(s) 270, 1809
EcoRI GAATTC 3 cut(s) 10, 1643, 1872
EcoRII CCWGG 2 cut(s) 1725, 2859
EcoRV GATATC 1 cut(s) 2713
EcoT14I CCWWGG 4 cut(s) 1306, 1597, 2381, 2811
EcoT22I ATGCAT 2 cut(s) 74, 207
EcoT38I GRGCYC 3 cut(s) 188, 1759, 2260
ErhI CCWWGG 4 cut(s) 1306, 1597, 2381, 2811
Esp3I CGTCTC 1 cut(s) 1226
FalI AAGNNNNNCTT 2 cut(s) 2065, 2097
FaqI GGGAC 1 cut(s) 484
FblI GTMKAC 2 cut(s) 1930, 2157
Fnu4HI GCNGC 3 cut(s) 431, 2004, 2387
FokI GGATG 5 cut(s) 533, 1069, 2488, 2700, 2894
FriOI GRGCYC 3 cut(s) 188, 1759, 2260
Fsp4HI GCNGC 3 cut(s) 431, 2004, 2387
FspI TGCGCA 1 cut(s) 2470
GlaI GCGC 4 cut(s) 359, 1622, 2470, 3032
GluI GCNGC 3 cut(s) 431, 2004, 2387
GsaI CCCAGC 2 cut(s) 635, 1108
GsuI CTGGAG 1 cut(s) 818
HaeII RGCGCY 1 cut(s) 1624
HaeIII GGCC 6 cut(s) 996, 1291, 1725, 2761, 2920, 2946
HapII CCGG 2 cut(s) 810, 2928
HhaI GCGC 4 cut(s) 360, 1623, 2471, 3033
Hin6I GCGC 4 cut(s) 358, 1621, 2469, 3031
HinP1I GCGC 4 cut(s) 358, 1621, 2469, 3031
HincII GTYRAC 2 cut(s) 2103, 2845
HindII GTYRAC 2 cut(s) 2103, 2845
HindIII AAGCTT 3 cut(s) 1241, 2143, 2587
HpaII CCGG 2 cut(s) 810, 2928
HphI GGTGA 8 cut(s) 338, 608, 1592, 1808, 2582, 2789, 3012, 3103
Hpy99I CGWCG 2 cut(s) 2408, 2492
HpyAV CCTTC 9 cut(s) 59, 276, 400, 705, 1250, 1805, 1926, 2222, 2549
HpyCH4III ACNGT 6 cut(s) 425, 511, 736, 2492, 2828, 3016
HpyCH4IV ACGT 2 cut(s) 553, 2008
HpyF10VI GCNNNNNNNGC 3 cut(s) 815, 1059, 1088
HpySE526I ACGT 2 cut(s) 553, 2008
HspAI GCGC 4 cut(s) 358, 1621, 2469, 3031
Kzo9I GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
LguI GCTCTTC 1 cut(s) 1340
LmnI GCTCC 5 cut(s) 260, 1618, 2225, 2862, 3014
Lsp1109I GCAGC 3 cut(s) 442, 1990, 2373
LweI GCATC 3 cut(s) 1091, 2612, 2979
MaeII ACGT 2 cut(s) 553, 2008
MaeIII GTNAC 8 cut(s) 221, 736, 1310, 1324, 1418, 2327, 2570, 3109
MalI GATC 6 cut(s) 126, 168, 2294, 2379, 2410, 2520
MboI GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
MfeI CAATTG 1 cut(s) 1968
MflI RGATCY 3 cut(s) 166, 2377, 2408
MhlI GDGCHC 5 cut(s) 80, 188, 1759, 1848, 2260
MlsI TGGCCA 1 cut(s) 1725
MluNI TGGCCA 1 cut(s) 1725
MmeI TCCRAC 4 cut(s) 431, 506, 536, 1677
Mox20I TGGCCA 1 cut(s) 1725
Mph1103I ATGCAT 2 cut(s) 74, 207
MroXI GAANNNNTTC 3 cut(s) 1819, 1884, 2094
MscI TGGCCA 1 cut(s) 1725
MseI TTAA 6 cut(s) 506, 641, 1461, 1976, 2199, 2207
MslI CAYNNNNRTG 4 cut(s) 2568, 2810, 3038, 3044
Msp20I TGGCCA 1 cut(s) 1725
MspA1I CMGCKG 1 cut(s) 433
MspI CCGG 2 cut(s) 810, 2928
MspR9I CCNGG 3 cut(s) 1727, 2861, 2929
MunI CAATTG 1 cut(s) 1968
Mva1269I GAATGC 4 cut(s) 2255, 2793, 2978, 3033
MvaI CCWGG 2 cut(s) 1727, 2861
MwoI GCNNNNNNNGC 3 cut(s) 815, 1059, 1088
NciI CCSGG 1 cut(s) 2929
NcoI CCATGG 1 cut(s) 2811
NdeII GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
NlaIV GGNNCC 6 cut(s) 256, 544, 817, 1731, 2276, 2653
NmuCI GTSAC 4 cut(s) 221, 1324, 2570, 3109
NsbI TGCGCA 1 cut(s) 2470
NsiI ATGCAT 2 cut(s) 74, 207
NspI RCATGY 2 cut(s) 379, 1899
NspV TTCGAA 1 cut(s) 2598
PagI TCATGA 2 cut(s) 180, 3039
PceI AGGCCT 1 cut(s) 2946
PciI ACATGT 1 cut(s) 375
PciSI GCTCTTC 1 cut(s) 1340
PctI GAATGC 4 cut(s) 2255, 2793, 2978, 3033
PdmI GAANNNNTTC 3 cut(s) 1819, 1884, 2094
PflFI GACNNNGTC 3 cut(s) 1486, 2632, 2828
PflMI CCANNNNNTGG 2 cut(s) 110, 1379
PfoI TCCNGGA 1 cut(s) 2859
PkrI GCNGC 3 cut(s) 432, 2005, 2388
PscI ACATGT 1 cut(s) 375
PshBI ATTAAT 1 cut(s) 1976
Psp124BI GAGCTC 3 cut(s) 188, 1759, 2260
Psp6I CCWGG 2 cut(s) 1725, 2859
PspFI CCCAGC 2 cut(s) 631, 1104
PspGI CCWGG 2 cut(s) 1725, 2859
PspN4I GGNNCC 6 cut(s) 256, 544, 817, 1731, 2276, 2653
PspPI GGNCC 1 cut(s) 1289
PsuI RGATCY 3 cut(s) 166, 2377, 2408
PsyI GACNNNGTC 3 cut(s) 1486, 2632, 2828
PvuII CAGCTG 1 cut(s) 433
RsaI GTAC 3 cut(s) 427, 1027, 2179
RsaNI GTAC 3 cut(s) 426, 1026, 2178
RseI CAYNNNNRTG 4 cut(s) 2568, 2810, 3038, 3044
SacI GAGCTC 3 cut(s) 188, 1759, 2260
SapI GCTCTTC 1 cut(s) 1340
SaqAI TTAA 6 cut(s) 506, 641, 1461, 1976, 2199, 2207
SatI GCNGC 3 cut(s) 431, 2004, 2387
Sau3AI GATC 6 cut(s) 124, 166, 2292, 2377, 2408, 2518
Sau96I GGNCC 1 cut(s) 1289
ScaI AGTACT 1 cut(s) 2179
ScrFI CCNGG 3 cut(s) 1727, 2861, 2929
SduI GDGCHC 5 cut(s) 80, 188, 1759, 1848, 2260
SfaNI GCATC 3 cut(s) 1091, 2612, 2979
SfcI CTRYAG 1 cut(s) 2716
SfuI TTCGAA 1 cut(s) 2598
SmiMI CAYNNNNRTG 4 cut(s) 2568, 2810, 3038, 3044
SmlI CTYRAG 3 cut(s) 1034, 1760, 2308
SmoI CTYRAG 3 cut(s) 1034, 1760, 2308
SpeI ACTAGT 2 cut(s) 1028, 1961
SseBI AGGCCT 1 cut(s) 2946
SsiI CCGC 1 cut(s) 2278
SspI AATATT 1 cut(s) 2449
SstI GAGCTC 3 cut(s) 188, 1759, 2260
StuI AGGCCT 1 cut(s) 2946
StyD4I CCNGG 3 cut(s) 1725, 2859, 2927
StyI CCWWGG 4 cut(s) 1306, 1597, 2381, 2811
TaaI ACNGT 6 cut(s) 425, 511, 736, 2492, 2828, 3016
TaiI ACGT 2 cut(s) 556, 2011
TaqI TCGA 6 cut(s) 701, 1472, 1753, 1922, 2544, 2598
TatI WGTACW 2 cut(s) 1025, 2177
Tru1I TTAA 6 cut(s) 506, 641, 1461, 1976, 2199, 2207
Tru9I TTAA 6 cut(s) 506, 641, 1461, 1976, 2199, 2207
TseFI GTSAC 4 cut(s) 221, 1324, 2570, 3109
TseI GCWGC 3 cut(s) 430, 2003, 2386
Tsp45I GTSAC 4 cut(s) 221, 1324, 2570, 3109
TspGWI ACGGA 2 cut(s) 2421, 2780
Tth111I GACNNNGTC 3 cut(s) 1486, 2632, 2828
Van91I CCANNNNNTGG 2 cut(s) 110, 1379
VspI ATTAAT 1 cut(s) 1976
XagI CCTNNNNNAGG 2 cut(s) 270, 1809
XbaI TCTAGA 1 cut(s) 2374
XceI RCATGY 2 cut(s) 379, 1899
XmaJI CCTAGG 1 cut(s) 1306
XmiI GTMKAC 2 cut(s) 1930, 2157
XmnI GAANNNNTTC 3 cut(s) 1819, 1884, 2094
ZrmI AGTACT 1 cut(s) 2179
Zsp2I ATGCAT 2 cut(s) 74, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.