Rmu_sc0001053.1_g000014

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001053.1
Physical Location & Seq
Forward (+)
56765 .. 57079
315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001053.1_g000014.1.cds

Sequence Viewer

Length: 315 bp
atggcagagtatggcatgggatgtcaaatttccgttctgggagatatatatagttatggaatactgttgctagatatgttcacaggaaaaagacccactgatgacatgttcaaagatgatctaagtattcaccaatttgcagccatggctttgcctgatcatgtcatggacatagctgacccttcattgctccttgtgacagatgacgaggatgatgacagatcctgcagtgacttacaagaaagaccattaaccagatatcaagatcacccccaagtcaacgcaagaagatttgaggaatgcttggttcagtga

Protein Analysis

104

Amino Acids

11.87

Weight (kDa)

4.2

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 216
AcsI RAATTY 1 cut(s) 27
AflIII ACRYGT 1 cut(s) 105
AgsI TTSAA 1 cut(s) 112
AluBI AGCT 1 cut(s) 176
AluI AGCT 1 cut(s) 176
AlwI GGATC 1 cut(s) 216
AlwNI CAGNNNCTG 1 cut(s) 225
ApeKI GCWGC 1 cut(s) 140
ApoI RAATTY 1 cut(s) 27
AsuHPI GGTGA 2 cut(s) 122, 260
BbvI GCAGC 1 cut(s) 152
BclI TGATCA 1 cut(s) 157
BfaI CTAG 1 cut(s) 71
BfmI CTRYAG 1 cut(s) 226
BisI GCNGC 1 cut(s) 141
BlsI GCNGC 1 cut(s) 142
BsaJI CCNNGG 1 cut(s) 144
Bse3DI GCAATG 1 cut(s) 185
BseDI CCNNGG 1 cut(s) 144
BseGI GGATG 2 cut(s) 26, 217
BseMI GCAATG 1 cut(s) 185
BseXI GCAGC 1 cut(s) 152
BsmI GAATGC 1 cut(s) 305
Bsp143I GATC 4 cut(s) 118, 157, 221, 265
Bsp19I CCATGG 1 cut(s) 144
BspMAI CTGCAG 1 cut(s) 230
BspPI GGATC 1 cut(s) 216
BsrDI GCAATG 1 cut(s) 185
BssECI CCNNGG 1 cut(s) 144
BssMI GATC 4 cut(s) 118, 157, 221, 265
BssT1I CCWWGG 1 cut(s) 144
Bst4CI ACNGT 1 cut(s) 66
BstDEI CTNAG 1 cut(s) 122
BstDSI CCRYGG 1 cut(s) 144
BstF5I GGATG 2 cut(s) 26, 217
BstKTI GATC 4 cut(s) 121, 160, 224, 268
BstMBI GATC 4 cut(s) 118, 157, 221, 265
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstNSI RCATGY 1 cut(s) 109
BstSFI CTRYAG 1 cut(s) 226
BstV1I GCAGC 1 cut(s) 152
BstX2I RGATCY 1 cut(s) 221
BstYI RGATCY 1 cut(s) 221
BtgI CCRYGG 1 cut(s) 144
BtsCI GGATG 2 cut(s) 26, 217
BtsI GCAGTG 1 cut(s) 235
BtsIMutI CAGTG 2 cut(s) 96, 235
CaiI CAGNNNCTG 1 cut(s) 225
CviAII CATG 5 cut(s) 16, 106, 145, 161, 166
CviJI RGCY 3 cut(s) 143, 149, 176
CviKI_1 RGCY 3 cut(s) 143, 149, 176
DdeI CTNAG 1 cut(s) 122
DpnI GATC 4 cut(s) 120, 159, 223, 267
DpnII GATC 4 cut(s) 118, 157, 221, 265
Eco130I CCWWGG 1 cut(s) 144
Eco32I GATATC 1 cut(s) 260
EcoRV GATATC 1 cut(s) 260
EcoT14I CCWWGG 1 cut(s) 144
ErhI CCWWGG 1 cut(s) 144
FaeI CATG 5 cut(s) 19, 109, 148, 164, 169
FatI CATG 5 cut(s) 15, 105, 144, 160, 165
FbaI TGATCA 1 cut(s) 157
Fnu4HI GCNGC 1 cut(s) 141
FokI GGATG 2 cut(s) 33, 224
Fsp4HI GCNGC 1 cut(s) 141
FspBI CTAG 1 cut(s) 71
GluI GCNGC 1 cut(s) 141
Hin1II CATG 5 cut(s) 19, 109, 148, 164, 169
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HphI GGTGA 2 cut(s) 122, 260
Hpy166II GTNNAC 2 cut(s) 81, 280
Hpy188III TCNNGA 1 cut(s) 263
Hpy8I GTNNAC 2 cut(s) 81, 280
HpyAV CCTTC 1 cut(s) 192
HpyCH4III ACNGT 1 cut(s) 66
HpyCH4V TGCA 2 cut(s) 140, 228
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
HpyF3I CTNAG 1 cut(s) 122
Hsp92II CATG 5 cut(s) 19, 109, 148, 164, 169
Ksp22I TGATCA 1 cut(s) 157
Kzo9I GATC 4 cut(s) 118, 157, 221, 265
LmnI GCTCC 1 cut(s) 195
LpnPI CCDG 5 cut(s) 23, 69, 168, 238, 268
Lsp1109I GCAGC 1 cut(s) 152
MaeI CTAG 1 cut(s) 71
MaeIII GTNAC 2 cut(s) 196, 230
MalI GATC 4 cut(s) 120, 159, 223, 267
MboI GATC 4 cut(s) 118, 157, 221, 265
MboII GAAGA 1 cut(s) 300
MflI RGATCY 1 cut(s) 221
MluCI AATT 2 cut(s) 27, 134
MnlI CCTC 2 cut(s) 202, 289
MseI TTAA 1 cut(s) 251
Mva1269I GAATGC 1 cut(s) 305
MwoI GCNNNNNNNGC 1 cut(s) 146
NcoI CCATGG 1 cut(s) 144
NdeII GATC 4 cut(s) 118, 157, 221, 265
NlaIII CATG 5 cut(s) 19, 109, 148, 164, 169
NmuCI GTSAC 2 cut(s) 196, 230
NspI RCATGY 1 cut(s) 109
PciI ACATGT 1 cut(s) 105
PctI GAATGC 1 cut(s) 305
PkrI GCNGC 1 cut(s) 142
PscI ACATGT 1 cut(s) 105
PstI CTGCAG 1 cut(s) 230
PstNI CAGNNNCTG 1 cut(s) 225
PsuI RGATCY 1 cut(s) 221
SaqAI TTAA 1 cut(s) 251
SatI GCNGC 1 cut(s) 141
Sau3AI GATC 4 cut(s) 118, 157, 221, 265
SetI ASST 1 cut(s) 178
SfcI CTRYAG 1 cut(s) 226
Sse9I AATT 2 cut(s) 27, 134
SspMI CTAG 1 cut(s) 71
StyI CCWWGG 1 cut(s) 144
TaaI ACNGT 1 cut(s) 66
TasI AATT 2 cut(s) 27, 134
Tru1I TTAA 1 cut(s) 251
Tru9I TTAA 1 cut(s) 251
TscAI CASTG 2 cut(s) 103, 235
TseFI GTSAC 2 cut(s) 196, 230
TseI GCWGC 1 cut(s) 140
Tsp45I GTSAC 2 cut(s) 196, 230
TspDTI ATGAA 1 cut(s) 174
TspGWI ACGGA 1 cut(s) 22
TspRI CASTG 2 cut(s) 103, 235
XapI RAATTY 1 cut(s) 27
XceI RCATGY 1 cut(s) 109
XspI CTAG 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.