MD04G1150400.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
23938084 .. 23942410
4327 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1150400.v1.1.491

Sequence Viewer

Length: 3090 bp
ATGAGCACAGGTCTGGAATCTGCAGCATTGTCAAACAGTACTTTTGGAAATGAATCCGACAGACTGGCACTGCTAGACTTCAAGAAAAGAATCACCGAAGATCCCCAACATATCATGAGCTCATGGAATGATTCCACCCATTTCTGTGGCTGGAGAGGTGTTACATGCAACAATTCCAACAAAAGAGTCCTGACATTGAAGTTGAATTCTCAAAATTTGGTAGGCTCCTTAACCCCTTCTATTGGAAACCTCACTTATCTTACTGGGATTAACCTTACGAGCAACGGCTTCCATGGTGAAATTCCTCAAGAAATCGGTCGATTAAGAAGCTTGGAATATCTCAACCTGTCTTACAATTCCTTCGGCGGAAAAATTCCAACCAATATGTCTTCTTGTACCCAACTAAAAGTGCTCAGTATTTATTCCAACAAGCTTACCGGGTCGATTCCTGACCAACTCAGCTCGTTGTTGAACTTAAATCATCTATGGGTTGATGAGAACAATCTCACCGGAACCATCCCTTATTGGGTAGGAAACTTCTCTTATTTGAAAACTGTTTATCTTGGCAGCAACAATTTACAAGGAATCATACCTAAGGAATTTAGGCGTCTAACAAGCTTGGAGAGATTCTCACTTCAGGGGAATAATTTATCTGGTCTGGTCCCTTCTTCAATCTATAATATTTCTTCCATATACCTTTTCGATGTTACTGAGAACCAGCTGCAAGGAGAGATACCACCAAATGTCGGCAATACTCTTCCTAATCTCATAGGGTTTTTCGCTGGGGCCAACAAGTTCACAGGGCGTGTTCCTGTCTCATTTGGAAATGCTTCTAGACTTGAGAGGCTTGATGTGTTCAGAAATTCTCTCACTGGGGCACTCCACGGTGAAAATCTTGGAAGCTTACGGAGCTTAGTTTGGCTAAACTTTGAAGAAAATAGACTAGGAAGTGGAAAACCCGGTGACTTGACTTTTCTTACTTTCTTGGCTAATTGTACTCGTTTGGAGACTTTAGGACTTTATGGTAATCGTTTTGGAGGAGAACTGCCAGGATCTATAGCCAATCTGTCAACCCAACTAATTAGTCTTACTCTGGGGGGTAATATGATACATGGAGTCATCCCTGAGGGTATTGGATATCTTGTAAACTTGACAGTCCTAGTACTAGAACATAACAATTTTGGTGGTACTGTCCCTAATACAATTGGGAAGCTTCAGAAATTAGTGGAGTTGTATCTGAATAGTAACAAACTTTCTGGGCCAATTCCTTCCTCCCTGGGTAACTTGTCTGCATTGACAAACCTCTACTTGGACTGGAATATGTTCGAGGGAAGCATCCCTCCAAGTCTTGCCAACTGCCAATTTCTACTGATACTTTACCTTTCTCATAACAATCTATCTGGTTCCATACCTAAACAGCTGCTTGCGCTTTCATCCCTTTCCATGTCTTTGAACATGTCTCACAATTCTTTGACTGGTTCACTACCATCCGAAGTGGGTGATTTGGTAAATCTCGCAGAGCTAGATGTATCAGAAAACAAGTTATCAGGTGAAATCCCACAAACTCTAGGTAGTTGTATAATGTTGGTGCGCCTGCATTTAGAAGGTAACAAATTTGAGGGAATAATTCCTCAATCTCTTAAAAATTTAAGAAGCTTGGAAGAGATAGATGTTTCGGGCAATAACTTATCTGGGCAGCTTCCTGAATTTCTAGGCAAGTTTACACTACTTGAGAAACTTAATCTTTCTCATAATAATTTTGAGGGTGAATTACCTAAAGAAGGGATATTTTTTAACGCAAGTGGCGTGTCAGTTCTTGGAAATGATAGGCTCTGTGGTGGCATCCCACAATTGCATCTGCCTGCATGCTCCCACAAAAAGCCCCATTCAACTCGAGGACTACTTGCCCTGAAAGTAGTCATCCCTATAGCTTCTTCTCTTGCACTCATAATTGCTCTATCATGCTTTATTGCTGCTTGTTCAATGGTGAAAAGGTCAAGACGCAAACCTGTGACTTTACGTTCTTATGAGGACTGGAAATCAGGTCTCTCGTACTCTGAACTCTTTGAATCAACTAATGGTTTCTCTATAGACAATCTGATTGGTTCGGGAAGTTTTGGTTCTGTTTACAAAGGAGTACTATCAAGTGATGTAGCAATAGTTGCCGTTAAGGTATTGAACCTTCAACAACCAGGAGCTTCCAAGAGTTTTATTGATGAATGCAAAACTTTGAAAAGTATAAGGCACCGTAATCTCCTCAAGATCATAACTGCATGCTCAAGCATTGACAATCAAGGTAATGACTTCAAAAGTCTAGTTTTTGAGTTCATGGAAAATGGAAGTCTAGATCCGTGGATTCATCCCAAAGGTGATGAGCAATCTCAAACAAAGAGAAAATTGAGCCTTACCGAAAGACTAGATATTGCAATTGATGTTGCTTCTGCATTAGATTATCTACACTACCAATGTGAAACGCCTATTGTTCACTGTGATCTAAAGCCAAGCAATGTGCTTCTTGATGAAGACATGGTAGCCCATGTTGGTGACTTTGGATTAGCAAGGTTCCTTTTGGAAGCTTCAAATTCGAACAATCTTGCCGCAAGTCAAACAATGTCAGCAGGTCTAAAGGGTTCCATAGGCTACATTCCTCCAGAGTATGGCATGGCAGGCCAAGTTTCTATACTTGGAGATACTTATAGCTACGGGATACTGCTACTAGAAATGTTCACAGGAAAAAGCCCTACTGATGATGTGTTTATAGATGGTCAAAGCATTCACCGTTTCACAGCCATGGCGTTGCCAGACCATGTCATGGACGTTGTTGACCGTTCATTGCTCCTTGAAATATATGATCCGGATGCTGATGATGAAGAATACAACAATGAAATACAAGAAGGACCAATTACAAAATATCAAGATCGGAGCTCAGCCCAAGCGAAAAGATTAGAGGAGTGCTTGGTTTCTGTGATGGAAATAGGGCTCGCATGCTCTTCAATATCGCCCGCAGAGCGGATGCCAATGAATGTTGTTGTTAACAAACTGAAGTCAATTAGAGAATCATACCTCAATCGAAGACGAACACGCTACTGA

Protein Analysis

1030

Amino Acids

112.66

Weight (kDa)

5.89

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 18 - 57 4e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 62 - 164 3.2e-08 Leucine-rich repeat region
LRR_8 PF13855 158 - 217 4.1e-08 Leucine rich repeat
LRR_8 PF13855 182 - 241 3.9e-07 Leucine rich repeat
LRR_14 PF23598 365 - 436 3e-07 Leucine-rich repeat region
LRR_8 PF13855 383 - 441 2.7e-07 Leucine rich repeat
LRR_14 PF23598 446 - 586 1.9e-11 Leucine-rich repeat region
LRR_8 PF13855 529 - 587 2e-07 Leucine rich repeat
Pkinase PF00069 696 - 916 2.5e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 697 - 929 2.3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2609
AccB1I GGYRCC 1 cut(s) 2244
AccB7I CCANNNNNTGG 2 cut(s) 2657, 2812
AccBSI CCGCTC 1 cut(s) 3010
AccIII TCCGGA 1 cut(s) 2854
AciI CCGC 4 cut(s) 366, 2598, 3003, 3010
AclWI GGATC 4 cut(s) 95, 1060, 2342, 2846
AcuI CTGAAG 3 cut(s) 620, 1199, 3062
AcyI GRCGYC 1 cut(s) 607
AfaI GTAC 7 cut(s) 40, 397, 997, 1164, 1189, 2054, 2139
AfiI CCNNNNNNNGG 8 cut(s) 242, 526, 746, 1309, 1781, 2657, 2812, 3009
AflIII ACRYGT 1 cut(s) 1455
AjnI CCWGG 3 cut(s) 1048, 1275, 2191
Alw21I GWGCWC 4 cut(s) 8, 122, 414, 2927
Alw26I GTCTC 4 cut(s) 820, 1001, 1464, 2051
AlwI GGATC 4 cut(s) 95, 1060, 2342, 2846
Ama87I CYCGRG 1 cut(s) 1893
Aor13HI TCCGGA 1 cut(s) 2854
AoxI GGCC 3 cut(s) 786, 1259, 2668
ApeKI GCWGC 6 cut(s) 23, 567, 721, 1420, 1696, 1973
Asp700I GAANNNNTTC 2 cut(s) 829, 1322
AspLEI GCGC 2 cut(s) 1429, 1593
AspS9I GGNCC 4 cut(s) 661, 786, 1259, 2897
AsuC2I CCSGG 2 cut(s) 439, 960
AsuII TTCGAA 1 cut(s) 2585
AvaI CYCGRG 1 cut(s) 1893
AvaII GGWCC 2 cut(s) 661, 2897
AxyI CCTNAGG 2 cut(s) 594, 1125
BaeGI GKGCMC 1 cut(s) 880
BanI GGYRCC 1 cut(s) 2244
BanII GRGCYC 3 cut(s) 122, 2927, 2982
BarI GAAGNNNNNNTAC 2 cut(s) 2166, 2198
BbsI GAAGAC 3 cut(s) 381, 2529, 3079
Bbv12I GWGCWC 4 cut(s) 8, 122, 414, 2927
BbvI GCAGC 6 cut(s) 35, 579, 708, 1407, 1708, 1960
BccI CCATC 4 cut(s) 524, 1495, 2756, 2962
BceAI ACGGC 2 cut(s) 301, 2150
BciT130I CCWGG 3 cut(s) 1050, 1277, 2193
BciVI GTATCC 1 cut(s) 2700
BcnI CCSGG 2 cut(s) 439, 960
BcoDI GTCTC 4 cut(s) 820, 1001, 1464, 2051
BfmI CTRYAG 4 cut(s) 21, 1056, 1926, 2088
BfuAI ACCTGC 1 cut(s) 2609
BfuI GTATCC 1 cut(s) 2700
BisI GCNGC 7 cut(s) 24, 568, 722, 1421, 1697, 1974, 2598
BlpI GCTNAGC 1 cut(s) 2926
BlsI GCNGC 7 cut(s) 25, 569, 723, 1422, 1698, 1975, 2599
BmcAI AGTACT 3 cut(s) 40, 1164, 2139
Bme1390I CCNGG 5 cut(s) 439, 960, 1050, 1277, 2193
Bme18I GGWCC 2 cut(s) 661, 2897
BmeT110I CYCGRG 1 cut(s) 1893
BmgT120I GGNCC 4 cut(s) 661, 786, 1259, 2897
BmiI GGNNCC 8 cut(s) 226, 514, 663, 787, 1405, 2246, 2564, 2632
BmrFI CCNGG 5 cut(s) 439, 960, 1050, 1277, 2193
BmrI ACTGGG 2 cut(s) 273, 882
BmsI GCATC 5 cut(s) 1344, 1851, 1864, 2848, 3003
BmuI ACTGGG 2 cut(s) 273, 882
BpiI GAAGAC 3 cut(s) 381, 2529, 3079
BplI GAGNNNNNCTC 2 cut(s) 614, 646
BpmI CTGGAG 2 cut(s) 172, 2634
Bpu1102I GCTNAGC 1 cut(s) 2926
Bpu14I TTCGAA 1 cut(s) 2585
BpuEI CTTGAG 5 cut(s) 291, 860, 1751, 2243, 2263
BpuMI CCSGG 2 cut(s) 439, 960
BsaHI GRCGYC 1 cut(s) 607
BsaI GGTCTC 1 cut(s) 2051
BsaJI CCNNGG 6 cut(s) 292, 883, 1275, 1276, 2351, 2790
BsaWI WCCGGW 2 cut(s) 509, 2854
Bsc4I CCNNNNNNNGG 8 cut(s) 242, 526, 746, 1309, 1781, 2657, 2812, 3009
Bse1I ACTGG 6 cut(s) 69, 268, 877, 1319, 1480, 2039
Bse21I CCTNAGG 2 cut(s) 594, 1125
Bse3DI GCAATG 2 cut(s) 2512, 2831
BseAI TCCGGA 1 cut(s) 2854
BseBI CCWGG 3 cut(s) 1050, 1277, 2193
BseDI CCNNGG 6 cut(s) 292, 883, 1275, 1276, 2351, 2790
BseLI CCNNNNNNNGG 8 cut(s) 242, 526, 746, 1309, 1781, 2657, 2812, 3009
BseMI GCAATG 2 cut(s) 2512, 2831
BseMII CTCAG 5 cut(s) 427, 472, 702, 1116, 2940
BseNI ACTGG 6 cut(s) 69, 268, 877, 1319, 1480, 2039
BseRI GAGGAG 3 cut(s) 1053, 2246, 2963
BseSI GKGCMC 1 cut(s) 880
BseXI GCAGC 6 cut(s) 35, 579, 708, 1407, 1708, 1960
BseYI CCCAGC 1 cut(s) 782
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 3 cut(s) 788, 1261, 2670
BshNI GGYRCC 1 cut(s) 2244
BsiEI CGRYCG 1 cut(s) 319
BsiHKAI GWGCWC 4 cut(s) 8, 122, 414, 2927
BsiHKCI CYCGRG 1 cut(s) 1893
BsiSI CCGG 4 cut(s) 438, 510, 960, 2855
BslFI GGGAC 2 cut(s) 647, 1178
BslI CCNNNNNNNGG 8 cut(s) 242, 526, 746, 1309, 1781, 2657, 2812, 3009
BsmAI GTCTC 4 cut(s) 820, 1001, 1464, 2051
BsmFI GGGAC 2 cut(s) 647, 1178
BsmI GAATGC 2 cut(s) 2225, 2772
BsnI GGCC 3 cut(s) 788, 1261, 2670
Bso31I GGTCTC 1 cut(s) 2051
BsoBI CYCGRG 1 cut(s) 1893
Bsp119I TTCGAA 1 cut(s) 2585
Bsp1286I GDGCHC 6 cut(s) 8, 122, 414, 880, 2927, 2982
Bsp13I TCCGGA 1 cut(s) 2854
Bsp143I GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
Bsp1720I GCTNAGC 1 cut(s) 2926
Bsp19I CCATGG 2 cut(s) 292, 2790
BspACI CCGC 4 cut(s) 366, 2598, 3003, 3010
BspANI GGCC 3 cut(s) 788, 1261, 2670
BspCNI CTCAG 5 cut(s) 426, 471, 703, 1117, 2939
BspEI TCCGGA 1 cut(s) 2854
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 8 cut(s) 226, 514, 663, 787, 1405, 2246, 2564, 2632
BspMAI CTGCAG 1 cut(s) 25
BspMI ACCTGC 1 cut(s) 2609
BspPI GGATC 4 cut(s) 95, 1060, 2342, 2846
BspQI GCTCTTC 1 cut(s) 2995
BspT104I TTCGAA 1 cut(s) 2585
BspT107I GGYRCC 1 cut(s) 2244
BspTNI GGTCTC 1 cut(s) 2051
BsrBI CCGCTC 1 cut(s) 3010
BsrDI GCAATG 2 cut(s) 2512, 2831
BsrI ACTGG 6 cut(s) 69, 268, 877, 1319, 1480, 2039
BssECI CCNNGG 6 cut(s) 292, 883, 1275, 1276, 2351, 2790
BssMI GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
BssNI GRCGYC 1 cut(s) 607
BssT1I CCWWGG 2 cut(s) 292, 2790
Bst2UI CCWGG 3 cut(s) 1050, 1277, 2193
Bst4CI ACNGT 9 cut(s) 38, 556, 887, 1156, 1192, 2249, 2489, 2780, 2828
Bst6I CTCTTC 3 cut(s) 762, 1656, 2995
BstACI GRCGYC 1 cut(s) 607
BstAPI GCANNNNNTGC 1 cut(s) 2162
BstBI TTCGAA 1 cut(s) 2585
BstC8I GCNNGC 9 cut(s) 1425, 1595, 1863, 1867, 2275, 2668, 2982, 2986, 3003
BstDEI CTNAG 7 cut(s) 413, 458, 594, 711, 913, 1125, 2926
BstDSI CCRYGG 4 cut(s) 292, 883, 2351, 2790
BstENI CCTNNNNNAGG 1 cut(s) 1779
BstHHI GCGC 2 cut(s) 1429, 1593
BstKTI GATC 7 cut(s) 103, 1055, 2265, 2350, 2494, 2854, 2920
BstMAI GTCTC 4 cut(s) 820, 1001, 1464, 2051
BstMBI GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 5 cut(s) 909, 1426, 2162, 2667, 3007
BstNI CCWGG 3 cut(s) 1050, 1277, 2193
BstNSI RCATGY 5 cut(s) 168, 1459, 1869, 2277, 2988
BstSCI CCNGG 5 cut(s) 437, 958, 1048, 1275, 2191
BstSFI CTRYAG 4 cut(s) 21, 1056, 1926, 2088
BstSLI GKGCMC 1 cut(s) 880
BstV1I GCAGC 6 cut(s) 35, 579, 708, 1407, 1708, 1960
BstV2I GAAGAC 3 cut(s) 381, 2529, 3079
BstX2I RGATCY 3 cut(s) 100, 1052, 2347
BstXI CCANNNNNNTGG 1 cut(s) 146
BstYI RGATCY 3 cut(s) 100, 1052, 2347
Bsu36I CCTNAGG 2 cut(s) 594, 1125
BsuI GTATCC 1 cut(s) 2700
BsuRI GGCC 3 cut(s) 788, 1261, 2670
BtgI CCRYGG 4 cut(s) 292, 883, 2351, 2790
BtsI GCAGTG 1 cut(s) 68
BtsIMutI CAGTG 3 cut(s) 68, 870, 2485
BveI ACCTGC 1 cut(s) 2609
Cac8I GCNNGC 9 cut(s) 1425, 1595, 1863, 1867, 2275, 2668, 2982, 2986, 3003
CciI TCATGA 1 cut(s) 114
CfoI GCGC 2 cut(s) 1429, 1593
Cfr13I GGNCC 4 cut(s) 661, 786, 1259, 2897
CseI GACGC 2 cut(s) 596, 2010
Csp6I GTAC 7 cut(s) 39, 396, 996, 1163, 1188, 2053, 2138
CspCI CAANNNNNGTGG 2 cut(s) 1165, 1200
CviQI GTAC 7 cut(s) 39, 396, 996, 1163, 1188, 2053, 2138
DdeI CTNAG 7 cut(s) 413, 458, 594, 711, 913, 1125, 2926
DpnI GATC 7 cut(s) 102, 1054, 2264, 2349, 2493, 2853, 2919
DpnII GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
Eam1104I CTCTTC 3 cut(s) 762, 1656, 2995
EarI CTCTTC 3 cut(s) 762, 1656, 2995
EciI GGCGGA 1 cut(s) 381
Ecl136II GAGCTC 2 cut(s) 120, 2925
Eco130I CCWWGG 2 cut(s) 292, 2790
Eco24I GRGCYC 3 cut(s) 122, 2927, 2982
Eco31I GGTCTC 1 cut(s) 2051
Eco32I GATATC 1 cut(s) 1139
Eco47I GGWCC 2 cut(s) 661, 2897
Eco53kI GAGCTC 2 cut(s) 120, 2925
Eco57I CTGAAG 3 cut(s) 620, 1199, 3062
Eco81I CCTNAGG 2 cut(s) 594, 1125
Eco88I CYCGRG 1 cut(s) 1893
EcoICRI GAGCTC 2 cut(s) 120, 2925
EcoNI CCTNNNNNAGG 1 cut(s) 1779
EcoRI GAATTC 1 cut(s) 205
EcoRII CCWGG 3 cut(s) 1048, 1275, 2191
EcoRV GATATC 1 cut(s) 1139
EcoT14I CCWWGG 2 cut(s) 292, 2790
EcoT38I GRGCYC 3 cut(s) 122, 2927, 2982
ErhI CCWWGG 2 cut(s) 292, 2790
FaqI GGGAC 2 cut(s) 647, 1178
FauI CCCGC 1 cut(s) 3010
Fnu4HI GCNGC 7 cut(s) 24, 568, 722, 1421, 1697, 1974, 2598
FriOI GRGCYC 3 cut(s) 122, 2927, 2982
Fsp4HI GCNGC 7 cut(s) 24, 568, 722, 1421, 1697, 1974, 2598
GlaI GCGC 2 cut(s) 1428, 1592
GluI GCNGC 7 cut(s) 24, 568, 722, 1421, 1697, 1974, 2598
GsaI CCCAGC 1 cut(s) 786
GsuI CTGGAG 2 cut(s) 172, 2634
HaeIII GGCC 3 cut(s) 788, 1261, 2670
HapII CCGG 4 cut(s) 438, 510, 960, 2855
HgaI GACGC 2 cut(s) 596, 2010
HhaI GCGC 2 cut(s) 1429, 1593
Hin1I GRCGYC 1 cut(s) 607
Hin6I GCGC 2 cut(s) 1427, 1591
HinP1I GCGC 2 cut(s) 1427, 1591
HincII GTYRAC 3 cut(s) 1071, 2824, 3034
HindII GTYRAC 3 cut(s) 1071, 2824, 3034
HindIII AAGCTT 7 cut(s) 328, 431, 616, 901, 1211, 1654, 2574
HpaI GTTAAC 1 cut(s) 3034
HpaII CCGG 4 cut(s) 438, 510, 960, 2855
Hpy188I TCNGA 9 cut(s) 58, 860, 1218, 1239, 1492, 1534, 2059, 2100, 2922
HpyAV CCTTC 8 cut(s) 246, 370, 675, 1278, 1598, 1775, 2192, 2888
HpyCH4III ACNGT 9 cut(s) 38, 556, 887, 1156, 1192, 2249, 2489, 2780, 2828
HpyCH4IV ACGT 2 cut(s) 2020, 2817
HpyF10VI GCNNNNNNNGC 5 cut(s) 909, 1426, 2162, 2667, 3007
HpyF3I CTNAG 7 cut(s) 413, 458, 594, 711, 913, 1125, 2926
HpySE526I ACGT 2 cut(s) 2020, 2817
Hsp92I GRCGYC 1 cut(s) 607
HspAI GCGC 2 cut(s) 1427, 1591
Kpn2I TCCGGA 1 cut(s) 2854
KspAI GTTAAC 1 cut(s) 3034
Kzo9I GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
LguI GCTCTTC 1 cut(s) 2995
LmnI GCTCC 6 cut(s) 230, 909, 1874, 2195, 2841, 2922
Lsp1109I GCAGC 6 cut(s) 35, 579, 708, 1407, 1708, 1960
LweI GCATC 5 cut(s) 1344, 1851, 1864, 2848, 3003
MaeII ACGT 2 cut(s) 2020, 2817
MaeIII GTNAC 8 cut(s) 160, 706, 962, 1244, 1280, 1607, 2011, 2543
MalI GATC 7 cut(s) 102, 1054, 2264, 2349, 2493, 2853, 2919
MbiI CCGCTC 1 cut(s) 3010
MboI GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
MfeI CAATTG 3 cut(s) 1203, 1850, 2427
MflI RGATCY 3 cut(s) 100, 1052, 2347
MhlI GDGCHC 6 cut(s) 8, 122, 414, 880, 2927, 2982
MlyI GAGTC 2 cut(s) 195, 1125
MmeI TCCRAC 4 cut(s) 81, 201, 401, 450
MroI TCCGGA 1 cut(s) 2854
MroXI GAANNNNTTC 2 cut(s) 829, 1322
MslI CAYNNNNRTG 3 cut(s) 144, 2541, 2789
MspA1I CMGCKG 2 cut(s) 721, 1420
MspI CCGG 4 cut(s) 438, 510, 960, 2855
MspR9I CCNGG 5 cut(s) 439, 960, 1050, 1277, 2193
MunI CAATTG 3 cut(s) 1203, 1850, 2427
Mva1269I GAATGC 2 cut(s) 2225, 2772
MvaI CCWGG 3 cut(s) 1050, 1277, 2193
MwoI GCNNNNNNNGC 5 cut(s) 909, 1426, 2162, 2667, 3007
NciI CCSGG 2 cut(s) 439, 960
NcoI CCATGG 2 cut(s) 292, 2790
NdeII GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
NlaIV GGNNCC 8 cut(s) 226, 514, 663, 787, 1405, 2246, 2564, 2632
NmuCI GTSAC 3 cut(s) 962, 2011, 2543
NspI RCATGY 5 cut(s) 168, 1459, 1869, 2277, 2988
NspV TTCGAA 1 cut(s) 2585
PaeI GCATGC 3 cut(s) 1869, 2277, 2988
PaeR7I CTCGAG 1 cut(s) 1893
PagI TCATGA 1 cut(s) 114
PasI CCCWGGG 1 cut(s) 1276
PciI ACATGT 1 cut(s) 1455
PciSI GCTCTTC 1 cut(s) 2995
PcsI WCGNNNNNNNCGW 1 cut(s) 1803
PctI GAATGC 2 cut(s) 2225, 2772
PdmI GAANNNNTTC 2 cut(s) 829, 1322
PflFI GACNNNGTC 1 cut(s) 2807
PflMI CCANNNNNTGG 2 cut(s) 2657, 2812
PkrI GCNGC 7 cut(s) 25, 569, 723, 1422, 1698, 1975, 2599
PleI GAGTC 2 cut(s) 194, 1124
PpsI GAGTC 2 cut(s) 194, 1124
PscI ACATGT 1 cut(s) 1455
Psp124BI GAGCTC 2 cut(s) 122, 2927
Psp6I CCWGG 3 cut(s) 1048, 1275, 2191
PspFI CCCAGC 1 cut(s) 782
PspGI CCWGG 3 cut(s) 1048, 1275, 2191
PspN4I GGNNCC 8 cut(s) 226, 514, 663, 787, 1405, 2246, 2564, 2632
PspPI GGNCC 4 cut(s) 661, 786, 1259, 2897
PspXI VCTCGAGB 1 cut(s) 1893
PstI CTGCAG 1 cut(s) 25
PsuI RGATCY 3 cut(s) 100, 1052, 2347
PsyI GACNNNGTC 1 cut(s) 2807
PvuII CAGCTG 2 cut(s) 721, 1420
RsaI GTAC 7 cut(s) 40, 397, 997, 1164, 1189, 2054, 2139
RsaNI GTAC 7 cut(s) 39, 396, 996, 1163, 1188, 2053, 2138
RseI CAYNNNNRTG 3 cut(s) 144, 2541, 2789
SacI GAGCTC 2 cut(s) 122, 2927
SapI GCTCTTC 1 cut(s) 2995
SatI GCNGC 7 cut(s) 24, 568, 722, 1421, 1697, 1974, 2598
Sau3AI GATC 7 cut(s) 100, 1052, 2262, 2347, 2491, 2851, 2917
Sau96I GGNCC 4 cut(s) 661, 786, 1259, 2897
ScaI AGTACT 3 cut(s) 40, 1164, 2139
SchI GAGTC 2 cut(s) 195, 1125
ScrFI CCNGG 5 cut(s) 439, 960, 1050, 1277, 2193
SduI GDGCHC 6 cut(s) 8, 122, 414, 880, 2927, 2982
SfaNI GCATC 5 cut(s) 1344, 1851, 1864, 2848, 3003
SfcI CTRYAG 4 cut(s) 21, 1056, 1926, 2088
Sfr274I CTCGAG 1 cut(s) 1893
SfuI TTCGAA 1 cut(s) 2585
SinI GGWCC 2 cut(s) 661, 2897
SlaI CTCGAG 1 cut(s) 1893
SmiMI CAYNNNNRTG 3 cut(s) 144, 2541, 2789
SmlI CTYRAG 6 cut(s) 306, 839, 1730, 1893, 2258, 2278
SmoI CTYRAG 6 cut(s) 306, 839, 1730, 1893, 2258, 2278
SphI GCATGC 3 cut(s) 1869, 2277, 2988
SsiI CCGC 4 cut(s) 366, 2598, 3003, 3010
SspI AATATT 1 cut(s) 682
SstI GAGCTC 2 cut(s) 122, 2927
StyD4I CCNGG 5 cut(s) 437, 958, 1048, 1275, 2191
StyI CCWWGG 2 cut(s) 292, 2790
TaaI ACNGT 9 cut(s) 38, 556, 887, 1156, 1192, 2249, 2489, 2780, 2828
TaiI ACGT 2 cut(s) 2023, 2820
TaqI TCGA 7 cut(s) 319, 443, 702, 1326, 1894, 2585, 3070
TaqII GACCGA 1 cut(s) 305
TatI WGTACW 4 cut(s) 38, 995, 1162, 2137
TauI GCSGC 1 cut(s) 2600
TscAI CASTG 3 cut(s) 75, 877, 2492
TseFI GTSAC 3 cut(s) 962, 2011, 2543
TseI GCWGC 6 cut(s) 23, 567, 721, 1420, 1696, 1973
Tsp45I GTSAC 3 cut(s) 962, 2011, 2543
TspGWI ACGGA 2 cut(s) 922, 2340
TspRI CASTG 3 cut(s) 75, 877, 2492
Tth111I GACNNNGTC 1 cut(s) 2807
Van91I CCANNNNNTGG 2 cut(s) 2657, 2812
VpaK11BI GGWCC 2 cut(s) 661, 2897
XagI CCTNNNNNAGG 1 cut(s) 1779
XbaI TCTAGA 2 cut(s) 833, 2344
XceI RCATGY 5 cut(s) 168, 1459, 1869, 2277, 2988
XhoI CTCGAG 1 cut(s) 1893
XmnI GAANNNNTTC 2 cut(s) 829, 1322
ZrmI AGTACT 3 cut(s) 40, 1164, 2139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.