MD07G1308700.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
36428636 .. 36432045
3410 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1308700.v1.1.491

Sequence Viewer

Length: 3213 bp
ATGGGGCATTCACCTACCAAGGGCAAGCTTGTTTCATTGAAATTCCTGCATGGTTTCATTCTTTTATGGATGGTCACATGTCCGGAATCTGCAGCACTTAACAGCCCTATTTCCAAGCAGTCTCTGCGTGGAAATGAATCTGATCGCTTGGCTTTGCTCGACTTCAAGAAGAAAATCACTGAAGATCCTTTCCATGTCATGAGCTTGTGGAATCAGTCCATCCATTTCTGCAGTTGGGTTGGAGTTTCGTGCCACCGTTCCGCCAAAAGGGTCGTGAGTTTGAACCTGCAAGCTCAACAACTGGTAGGCTCCATACCACCTTCCATTGGAAATCTTACCTTTCTTTCTGCACTAAACCTGATGAGGAACAACTTTCATGGTGAGATTCCCCCAGAAATGGGTCGTTTACGAAGCCTGCAATATCTCAACCTTTCTCAAAATTCCTTCCGTGGGAAAATTCCAGCTAATATGTCACATTGTACACAACTAAGACTTCTTAATCTTGAATCCAATCAGATTACTGGGTCCATTCCAAACCAACTCAGTTCATTGTTGAAACTAAATCATCTATGGCTTTTTTATAACAATCTCAGTGGAAACATCCCAGGTTGGATAGGAAACTTTTCTTCTTTGAAAATTCTTAATCTTGGCCGCAACAATTTCCATGGAACTATAAGCAATGAACTCGGGCACCTAACAGGCTTGGACCTATTCTCAGTTGAGGCTAATAATTTATCTGGTATGGTTCCTTCTTCGGTCTATAATATTTCTTCCATAAAGTTTTTCAGTGTTGTTGAAAATTACGAGTTGCATGGAGAGCTACCACCAAATCTCGGCACAATGCTTCCTAATCTCGTAATATTTTATTGTGCTTTTAACAAATTCACAGGAAATATTCCTGTATCGTTGTCAAATGCTTCTAGACTTCAGAAGCTTGATCTTGCTGGAAATGGCTTTTCTGGGGCAGTCCCCGGTGATACTCTCGGAAGCTTGCAAAGGTTAGATTGGCTAAACTTGGAACAGAATCAACTGGGAAATAGAAAAGCTGGTGAATTGAATTTTCTAAGTCTCTTGGCCAATTGTACTAGTTTAACGGAGTTGGATCTTTCCGATAATCAGTTTGGAGGACGAATCCCGGGGTCCATAGCTAATCTTTCTACCCAACTACAAGATCTTCGCCTGGGGTGGAATTATTTACATGGAAGTCTCCCTAACGGCATTGGAAATCTTTTAAACTTGACTTATCTAGGATTGACACTAAACTATTTGGGTGGTAGTGTCCCGGATGAAATTGGGAAACTTCAGAAGTTAGAGGGATTGGATTTGGAATGTAACAAATTTTCTGGGCGAATCCCATTCTCACTTGGTAACTTGACTTCACTGACAGAGCTCTACATGTGGTCCAATAGCTTTGAGGGTAGTATACCTCCAAGTCTTGGAAACTGCAAAAAGCTAATAAGTCTTGGACTTGATAGTAACAATCTTACGGGCACCATACCTACGAAGCTTATGGAGCTTTCAACCCTCTCAATTTCTTTAGTCCTGTCTTATAATTATTTGACTGGTCAACTGCCCTTTGAGGTGGGTAATCTAGTGCATCTCACGGAGCTAAATGTATTAGACAACAAGTTATCAGGTGAAATCCCTAGCACCCTCGGCAGTTGTACTAGTTTGGAGCGATTGTATTTGCAAGGTAATAAGTTTGAAGGAACAATTCCTCAATCTCTTGAAAATTTAAAAGGCTTGGAAACTCTTGACATTTCAAGCAATAACTTGTCTGGGCAGATTCCTGAATTCATAAGCAAGCTTAGAGCTCTTAAGTATCTCAATCTTTCATACAATGATTTTGAGGGTGAGTTGCCCAAAGAAAGAATTTTTGTAAATGTCAGTGGTGTCTCAGTTCTTGGAAATCATAGGCTTTGTGGTGGCATCCCACAATTACATCTTCCTACATGCCCCCTCAAAAAACAACATTCATCTCGAAGACTACTTTCCCCAAAAGTAGTCATCCCCTTAGCTTGTGCACTTGCATTCATAATTGCTTTATCATGCTACTTTGGTTCTTGTTTAGTGTTGAAAAAGTCAAGAGATAGACCTATAACTTCATGTTCTAATAGTGATTGGACAAGAGTTTCCTACTCAAAACTCGTTGAATATACTAACGGGTTCTCTCTGAATAATCTAATTGGTACTGGAAGTTTTGGTTCTGTTTTTAAAGGGGTAATTCCTGATGACGGAACAATAGTCGCTATTAAGGTAATAAACCTTCAACAAAAAGGAGCTTCAAAGAGTTTCTTTGATGAATGCAAAGCTTTAAGGAACACAAGGCACCGTAATCTTCTCAAGATCATAACTGCGTGCTCAAGCATTGATAATCAGGGAAAAGACTTCAAAAGCTTAGTTTTTGAGTTCATGGAAAATGGAAGCCTAGACTCATGGCTGTATCCAAGAGAGGAGGAGCAATCCCAGATTAAGAGATTGAGCCTTATCCAAAGATTGAATATTGCCATTGACATTGCATCAGCGTTGGATTATCTCCACCACCATTGTGAAACGTCCATTGTTCATTGCGATCTGAAGCCGAGCAATGTACTTCTTGATGAAGATATGGTAGCCCATGTTGGAGACTTTGGTTTAGTAAAGTTCCTCTTCGAAACATCAAATGATCCCTTCTTCAGTCAAACCATATCTGCTCAACTAAAGGGTTCTATAGGATACATTCCCCCAGAGTATGGCACGGGAGGCCAAGTTTCTATGCTGGGAGATGTTTATAGCTATGGGATATTGTTGCTAGAAATGTTTACGGGAAAGAGACCTACCGATGACATGTTCAAAGAGGGTCTTAGCATTTACGAATTCGTAGCCACGGCTTTGCCTGACCACGTGATGGACGTTGTTGACCCTTCATTACAGCTCGACCTCGATGCAGGTGGTGATGTTAACGATGGCAGATACGGCAATGACATACTGCACGAAAGAACTGCACTACAAATACGTGTCAATGGCAGACCGGTCAAAGAAAAAAAGTTAGAGGAATGCTTTTCTGCAGTGATGCGGGTAGGACTCTCTTGCTGTGCAATATCACCAAGGGAGCGGATGCATATGGATGCGGCTGTTGGAAAAATGAGTGCAATTAGAGACTCATACCTCAAAGTTTTAGAAGACTTACGGAGGGCAAAGCAAGGCTGCTCGAAGGAGAATGAACTTTGCTGA

Protein Analysis

1071

Amino Acids

118.04

Weight (kDa)

6.93

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 46 - 84 6.6e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 115 - 173 1.3e-07 Leucine rich repeat
LRR_14 PF23598 133 - 347 1.4e-11 Leucine-rich repeat region
LRR_14 PF23598 405 - 509 8.5e-10 Leucine-rich repeat region
LRR_14 PF23598 520 - 616 7e-09 Leucine-rich repeat region
LRR_4 PF12799 556 - 599 1.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 557 - 616 1.5e-10 Leucine rich repeat
Pkinase PF00069 725 - 941 5.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 725 - 946 1.4e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 582, 1551
AarI CACCTGC 1 cut(s) 2918
Acc36I ACCTGC 2 cut(s) 294, 2918
AccB1I GGYRCC 3 cut(s) 690, 1490, 2328
AccB7I CCANNNNNTGG 3 cut(s) 1436, 2732, 2887
AccBSI CCGCTC 1 cut(s) 3094
AccI GTMKAC 1 cut(s) 1423
AccIII TCCGGA 1 cut(s) 82
AciI CCGC 5 cut(s) 261, 652, 3055, 3094, 3110
AclWI GGATC 3 cut(s) 179, 1110, 2660
AcoI YGGCCR 2 cut(s) 649, 1074
AcuI CTGAAG 5 cut(s) 201, 911, 1286, 2597, 2659
AcvI CACGTG 1 cut(s) 2884
AfaI GTAC 5 cut(s) 481, 1084, 1666, 2191, 2592
AflII CTTAAG 1 cut(s) 1817
AflIII ACRYGT 4 cut(s) 77, 1395, 2826, 2995
AgeI ACCGGT 1 cut(s) 3010
AhlI ACTAGT 2 cut(s) 1085, 1667
AjnI CCWGG 2 cut(s) 604, 1179
AleI CACNNNNGTG 1 cut(s) 2547
Alw21I GWGCWC 4 cut(s) 1392, 1816, 2026, 2363
Alw26I GTCTC 7 cut(s) 126, 1073, 1211, 1900, 2619, 2806, 3132
Alw44I GTGCAC 1 cut(s) 2022
AlwI GGATC 3 cut(s) 179, 1110, 2660
AlwNI CAGNNNCTG 1 cut(s) 124
Ama87I CYCGRG 2 cut(s) 686, 1135
Aor13HI TCCGGA 1 cut(s) 82
AoxI GGCC 3 cut(s) 649, 1074, 2743
ApaLI GTGCAC 1 cut(s) 2022
ApeKI GCWGC 2 cut(s) 92, 3186
AsiGI ACCGGT 1 cut(s) 3010
Asp700I GAANNNNTTC 1 cut(s) 622
AspS9I GGNCC 4 cut(s) 525, 706, 1140, 1401
AsuC2I CCSGG 4 cut(s) 972, 1136, 1137, 1283
AsuHPI GGTGA 8 cut(s) 3, 392, 986, 1061, 1649, 1865, 2945, 3075
AsuII TTCGAA 1 cut(s) 2652
AvaI CYCGRG 2 cut(s) 686, 1135
AvaII GGWCC 4 cut(s) 525, 706, 1140, 1401
BaeGI GKGCMC 3 cut(s) 693, 1493, 2026
BalI TGGCCA 1 cut(s) 1076
BanI GGYRCC 3 cut(s) 690, 1490, 2328
BanII GRGCYC 2 cut(s) 1392, 1816
BarI GAAGNNNNNNTAC 6 cut(s) 733, 765, 1360, 1392, 2250, 2282
BbrPI CACGTG 1 cut(s) 2884
BbsI GAAGAC 2 cut(s) 1990, 3168
Bbv12I GWGCWC 4 cut(s) 1392, 1816, 2026, 2363
BbvI GCAGC 2 cut(s) 104, 3173
BccI CCATC 4 cut(s) 64, 227, 2881, 2939
BceAI ACGGC 3 cut(s) 1231, 2883, 2971
BcgI CGANNNNNNTGC 6 cut(s) 667, 701, 2906, 2940, 2963, 2997
BciT130I CCWGG 2 cut(s) 606, 1181
BciVI GTATCC 2 cut(s) 2454, 2708
BcnI CCSGG 4 cut(s) 972, 1136, 1137, 1283
BcoDI GTCTC 7 cut(s) 126, 1073, 1211, 1900, 2619, 2806, 3132
BcuI ACTAGT 2 cut(s) 1085, 1667
BfaI CTAG 8 cut(s) 921, 1086, 1247, 1592, 1647, 1668, 2429, 2792
BfmI CTRYAG 4 cut(s) 90, 229, 2709, 3045
BfrI CTTAAG 1 cut(s) 1817
BfuAI ACCTGC 2 cut(s) 294, 2918
BfuI GTATCC 2 cut(s) 2454, 2708
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 4 cut(s) 93, 652, 3111, 3187
BlsI GCNGC 4 cut(s) 94, 653, 3112, 3188
Bme1390I CCNGG 6 cut(s) 606, 972, 1136, 1137, 1181, 1283
Bme18I GGWCC 4 cut(s) 525, 706, 1140, 1401
BmeT110I CYCGRG 2 cut(s) 686, 1135
BmgT120I GGNCC 4 cut(s) 525, 706, 1140, 1401
BmiI GGNNCC 7 cut(s) 310, 526, 692, 747, 1141, 1492, 2330
BmrFI CCNGG 6 cut(s) 606, 972, 1136, 1137, 1181, 1283
BmrI ACTGGG 2 cut(s) 531, 1040
BmsI GCATC 7 cut(s) 1606, 1938, 2528, 2914, 3042, 3087, 3097
BmuI ACTGGG 2 cut(s) 531, 1040
BpiI GAAGAC 2 cut(s) 1990, 3168
Bpu10I CCTNAGC 1 cut(s) 2014
Bpu14I TTCGAA 1 cut(s) 2652
BpuEI CTTGAG 2 cut(s) 2327, 2347
BpuMI CCSGG 4 cut(s) 972, 1136, 1137, 1283
BsaAI YACGTR 2 cut(s) 2884, 2996
BsaI GGTCTC 1 cut(s) 2806
BsaWI WCCGGW 2 cut(s) 82, 3010
BsaXI ACNNNNNCTCC 4 cut(s) 1667, 1697, 2733, 2763
Bse118I RCCGGY 1 cut(s) 3010
Bse1I ACTGG 5 cut(s) 306, 526, 1035, 1567, 2197
Bse3DI GCAATG 5 cut(s) 685, 2514, 2566, 2593, 2965
BseAI TCCGGA 1 cut(s) 82
BseBI CCWGG 2 cut(s) 606, 1181
BseGI GGATG 8 cut(s) 75, 219, 600, 1291, 1929, 2007, 3102, 3112
BseMI GCAATG 5 cut(s) 685, 2514, 2566, 2593, 2965
BseMII CTCAG 4 cut(s) 556, 604, 729, 1911
BseNI ACTGG 5 cut(s) 306, 526, 1035, 1567, 2197
BseRI GAGGAG 2 cut(s) 2468, 2471
BseSI GKGCMC 3 cut(s) 693, 1493, 2026
BseXI GCAGC 2 cut(s) 104, 3173
BseYI CCCAGC 1 cut(s) 2758
BsgI GTGCAG 3 cut(s) 333, 2954, 2967
BshFI GGCC 3 cut(s) 651, 1076, 2745
BshNI GGYRCC 3 cut(s) 690, 1490, 2328
BshTI ACCGGT 1 cut(s) 3010
BsiHKAI GWGCWC 4 cut(s) 1392, 1816, 2026, 2363
BsiHKCI CYCGRG 2 cut(s) 686, 1135
BsiSI CCGG 5 cut(s) 83, 972, 1136, 1283, 3011
BslFI GGGAC 2 cut(s) 953, 1265
BsmAI GTCTC 7 cut(s) 126, 1073, 1211, 1900, 2619, 2806, 3132
BsmFI GGGAC 2 cut(s) 953, 1265
BsmI GAATGC 4 cut(s) 7, 2030, 2309, 3041
BsnI GGCC 3 cut(s) 651, 1076, 2745
Bso31I GGTCTC 1 cut(s) 2806
BsoBI CYCGRG 2 cut(s) 686, 1135
Bsp119I TTCGAA 1 cut(s) 2652
Bsp1286I GDGCHC 6 cut(s) 693, 1392, 1493, 1816, 2026, 2363
Bsp13I TCCGGA 1 cut(s) 82
Bsp1407I TGTACA 1 cut(s) 479
Bsp143I GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
Bsp19I CCATGG 1 cut(s) 664
BspACI CCGC 5 cut(s) 261, 652, 3055, 3094, 3110
BspANI GGCC 3 cut(s) 651, 1076, 2745
BspCNI CTCAG 4 cut(s) 555, 603, 728, 1910
BspEI TCCGGA 1 cut(s) 82
BspHI TCATGA 1 cut(s) 198
BspLI GGNNCC 7 cut(s) 310, 526, 692, 747, 1141, 1492, 2330
BspMAI CTGCAG 3 cut(s) 94, 233, 3049
BspMI ACCTGC 2 cut(s) 294, 2918
BspPI GGATC 3 cut(s) 179, 1110, 2660
BspT104I TTCGAA 1 cut(s) 2652
BspT107I GGYRCC 3 cut(s) 690, 1490, 2328
BspTI CTTAAG 1 cut(s) 1817
BspTNI GGTCTC 1 cut(s) 2806
BsrBI CCGCTC 1 cut(s) 3094
BsrDI GCAATG 5 cut(s) 685, 2514, 2566, 2593, 2965
BsrFI RCCGGY 1 cut(s) 3010
BsrGI TGTACA 1 cut(s) 479
BsrI ACTGG 5 cut(s) 306, 526, 1035, 1567, 2197
BssAI RCCGGY 1 cut(s) 3010
BssMI GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
BssNAI GTATAC 1 cut(s) 1424
BssT1I CCWWGG 3 cut(s) 18, 664, 3086
Bst1107I GTATAC 1 cut(s) 1424
Bst2UI CCWGG 2 cut(s) 606, 1181
Bst4CI ACNGT 2 cut(s) 257, 2333
Bst6I CTCTTC 1 cut(s) 2654
BstAFI CTTAAG 1 cut(s) 1817
BstAPI GCANNNNNTGC 1 cut(s) 124
BstAUI TGTACA 1 cut(s) 479
BstBAI YACGTR 2 cut(s) 2884, 2996
BstBI TTCGAA 1 cut(s) 2652
BstC8I GCNNGC 6 cut(s) 26, 291, 416, 992, 1805, 2359
BstDSI CCRYGG 3 cut(s) 448, 664, 2865
BstF5I GGATG 8 cut(s) 75, 219, 600, 1291, 1929, 2007, 3102, 3112
BstKTI GATC 8 cut(s) 145, 187, 940, 1105, 1174, 2349, 2575, 2668
BstMAI GTCTC 7 cut(s) 126, 1073, 1211, 1900, 2619, 2806, 3132
BstMBI GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
BstMWI GCNNNNNNNGC 6 cut(s) 124, 817, 1513, 1656, 2742, 2955
BstNI CCWGG 2 cut(s) 606, 1181
BstNSI RCATGY 4 cut(s) 81, 1399, 1956, 2830
BstSCI CCNGG 6 cut(s) 604, 970, 1134, 1135, 1179, 1281
BstSFI CTRYAG 4 cut(s) 90, 229, 2709, 3045
BstSLI GKGCMC 3 cut(s) 693, 1493, 2026
BstV1I GCAGC 2 cut(s) 104, 3173
BstV2I GAAGAC 2 cut(s) 1990, 3168
BstX2I RGATCY 3 cut(s) 184, 1102, 1171
BstYI RGATCY 3 cut(s) 184, 1102, 1171
BstZ17I GTATAC 1 cut(s) 1424
BsuI GTATCC 2 cut(s) 2454, 2708
BsuRI GGCC 3 cut(s) 651, 1076, 2745
BtgI CCRYGG 3 cut(s) 448, 664, 2865
BtsCI GGATG 8 cut(s) 75, 219, 600, 1291, 1929, 2007, 3102, 3112
BtsI GCAGTG 1 cut(s) 3054
BtsIMutI CAGTG 6 cut(s) 177, 598, 793, 1379, 1894, 3054
BveI ACCTGC 2 cut(s) 294, 2918
Cac8I GCNNGC 6 cut(s) 26, 291, 416, 992, 1805, 2359
CaiI CAGNNNCTG 1 cut(s) 124
CciI TCATGA 1 cut(s) 198
Cfr10I RCCGGY 1 cut(s) 3010
Cfr13I GGNCC 4 cut(s) 525, 706, 1140, 1401
Cfr9I CCCGGG 1 cut(s) 1135
Csp6I GTAC 5 cut(s) 480, 1083, 1665, 2190, 2591
CspAI ACCGGT 1 cut(s) 3010
CspCI CAANNNNNGTGG 4 cut(s) 574, 609, 2528, 2563
CviQI GTAC 5 cut(s) 480, 1083, 1665, 2190, 2591
DpnI GATC 8 cut(s) 144, 186, 939, 1104, 1173, 2348, 2574, 2667
DpnII GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
DraI TTTAAA 3 cut(s) 1233, 1737, 2215
EaeI YGGCCR 2 cut(s) 649, 1074
Eam1104I CTCTTC 1 cut(s) 2654
EarI CTCTTC 1 cut(s) 2654
EciI GGCGGA 1 cut(s) 250
Ecl136II GAGCTC 2 cut(s) 1390, 1814
Eco130I CCWWGG 3 cut(s) 18, 664, 3086
Eco24I GRGCYC 2 cut(s) 1392, 1816
Eco31I GGTCTC 1 cut(s) 2806
Eco47I GGWCC 4 cut(s) 525, 706, 1140, 1401
Eco53kI GAGCTC 2 cut(s) 1390, 1814
Eco57I CTGAAG 5 cut(s) 201, 911, 1286, 2597, 2659
Eco72I CACGTG 1 cut(s) 2884
Eco88I CYCGRG 2 cut(s) 686, 1135
EcoICRI GAGCTC 2 cut(s) 1390, 1814
EcoRI GAATTC 2 cut(s) 1793, 2855
EcoRII CCWGG 2 cut(s) 604, 1179
EcoT14I CCWWGG 3 cut(s) 18, 664, 3086
EcoT22I ATGCAT 1 cut(s) 3102
EcoT38I GRGCYC 2 cut(s) 1392, 1816
ErhI CCWWGG 3 cut(s) 18, 664, 3086
FalI AAGNNNNNCTT 6 cut(s) 2279, 2311, 2633, 2665, 2826, 2858
FaqI GGGAC 2 cut(s) 953, 1265
FauI CCCGC 1 cut(s) 3048
FauNDI CATATG 1 cut(s) 3102
FblI GTMKAC 1 cut(s) 1423
Fnu4HI GCNGC 4 cut(s) 93, 652, 3111, 3187
FokI GGATG 8 cut(s) 82, 206, 587, 1298, 1916, 1994, 3109, 3119
FriOI GRGCYC 2 cut(s) 1392, 1816
Fsp4HI GCNGC 4 cut(s) 93, 652, 3111, 3187
FspBI CTAG 8 cut(s) 921, 1086, 1247, 1592, 1647, 1668, 2429, 2792
GluI GCNGC 4 cut(s) 93, 652, 3111, 3187
GsaI CCCAGC 1 cut(s) 2762
HaeIII GGCC 3 cut(s) 651, 1076, 2745
HapII CCGG 5 cut(s) 83, 972, 1136, 1283, 3011
HincII GTYRAC 3 cut(s) 1568, 2899, 2941
HindII GTYRAC 3 cut(s) 1568, 2899, 2941
HindIII AAGCTT 7 cut(s) 26, 932, 988, 1505, 1805, 2310, 2395
HpaI GTTAAC 1 cut(s) 2941
HpaII CCGG 5 cut(s) 83, 972, 1136, 1283, 3011
HphI GGTGA 8 cut(s) 3, 392, 986, 1061, 1649, 1865, 2945, 3075
Hpy166II GTNNAC 8 cut(s) 407, 482, 1424, 1568, 2024, 2802, 2899, 2941
Hpy188I TCNGA 8 cut(s) 142, 516, 930, 986, 1111, 1305, 2175, 2577
Hpy8I GTNNAC 8 cut(s) 407, 482, 1424, 1568, 2024, 2802, 2899, 2941
HpyAV CCTTC 8 cut(s) 330, 454, 759, 1700, 2276, 2680, 2913, 3187
HpyCH4III ACNGT 2 cut(s) 257, 2333
HpyCH4IV ACGT 4 cut(s) 2555, 2883, 2892, 2995
HpyF10VI GCNNNNNNNGC 6 cut(s) 124, 817, 1513, 1656, 2742, 2955
HpySE526I ACGT 4 cut(s) 2555, 2883, 2892, 2995
Kpn2I TCCGGA 1 cut(s) 82
KspAI GTTAAC 1 cut(s) 2941
Kzo9I GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
LmnI GCTCC 7 cut(s) 314, 1513, 1606, 1675, 2279, 2458, 3091
Lsp1109I GCAGC 2 cut(s) 104, 3173
LweI GCATC 7 cut(s) 1606, 1938, 2528, 2914, 3042, 3087, 3097
MaeI CTAG 8 cut(s) 921, 1086, 1247, 1592, 1647, 1668, 2429, 2792
MaeII ACGT 4 cut(s) 2555, 2883, 2892, 2995
MaeIII GTNAC 5 cut(s) 73, 471, 1331, 1367, 1475
MalI GATC 8 cut(s) 144, 186, 939, 1104, 1173, 2348, 2574, 2667
MbiI CCGCTC 1 cut(s) 3094
MboI GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
MfeI CAATTG 1 cut(s) 1078
MflI RGATCY 3 cut(s) 184, 1102, 1171
MhlI GDGCHC 6 cut(s) 693, 1392, 1493, 1816, 2026, 2363
MlsI TGGCCA 1 cut(s) 1076
MluNI TGGCCA 1 cut(s) 1076
MlyI GAGTC 3 cut(s) 2426, 3057, 3134
MmeI TCCRAC 6 cut(s) 220, 590, 1080, 2508, 2602, 3097
Mox20I TGGCCA 1 cut(s) 1076
Mph1103I ATGCAT 1 cut(s) 3102
MroI TCCGGA 1 cut(s) 82
MroXI GAANNNNTTC 1 cut(s) 622
MscI TGGCCA 1 cut(s) 1076
MslI CAYNNNNRTG 2 cut(s) 2547, 3105
Msp20I TGGCCA 1 cut(s) 1076
MspCI CTTAAG 1 cut(s) 1817
MspI CCGG 5 cut(s) 83, 972, 1136, 1283, 3011
MspR9I CCNGG 6 cut(s) 606, 972, 1136, 1137, 1181, 1283
MunI CAATTG 1 cut(s) 1078
Mva1269I GAATGC 4 cut(s) 7, 2030, 2309, 3041
MvaI CCWGG 2 cut(s) 606, 1181
MwoI GCNNNNNNNGC 6 cut(s) 124, 817, 1513, 1656, 2742, 2955
NciI CCSGG 4 cut(s) 972, 1136, 1137, 1283
NcoI CCATGG 1 cut(s) 664
NdeI CATATG 1 cut(s) 3102
NdeII GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
NlaIV GGNNCC 7 cut(s) 310, 526, 692, 747, 1141, 1492, 2330
NmeAIII GCCGAG 3 cut(s) 813, 1635, 2607
NmuCI GTSAC 2 cut(s) 73, 471
NsiI ATGCAT 1 cut(s) 3102
NspI RCATGY 4 cut(s) 81, 1399, 1956, 2830
NspV TTCGAA 1 cut(s) 2652
OliI CACNNNNGTG 1 cut(s) 2547
PagI TCATGA 1 cut(s) 198
PaqCI CACCTGC 1 cut(s) 2918
PciI ACATGT 3 cut(s) 77, 1395, 2826
PcsI WCGNNNNNNNCGW 1 cut(s) 2889
PctI GAATGC 4 cut(s) 7, 2030, 2309, 3041
PdmI GAANNNNTTC 1 cut(s) 622
PfeI GAWTC 9 cut(s) 86, 137, 211, 385, 506, 1024, 1131, 1350, 1786
PflMI CCANNNNNTGG 3 cut(s) 1436, 2732, 2887
PfoI TCCNGGA 1 cut(s) 1281
PinAI ACCGGT 1 cut(s) 3010
PkrI GCNGC 4 cut(s) 94, 653, 3112, 3188
PleI GAGTC 3 cut(s) 2426, 3057, 3134
PmaCI CACGTG 1 cut(s) 2884
PmlI CACGTG 1 cut(s) 2884
PpsI GAGTC 3 cut(s) 2426, 3057, 3134
Ppu21I YACGTR 2 cut(s) 2884, 2996
PscI ACATGT 3 cut(s) 77, 1395, 2826
PsiI TTATAA 2 cut(s) 582, 1551
Psp124BI GAGCTC 2 cut(s) 1392, 1816
Psp6I CCWGG 2 cut(s) 604, 1179
PspCI CACGTG 1 cut(s) 2884
PspFI CCCAGC 1 cut(s) 2758
PspGI CCWGG 2 cut(s) 604, 1179
PspN4I GGNNCC 7 cut(s) 310, 526, 692, 747, 1141, 1492, 2330
PspPI GGNCC 4 cut(s) 525, 706, 1140, 1401
PstI CTGCAG 3 cut(s) 94, 233, 3049
PstNI CAGNNNCTG 1 cut(s) 124
PsuI RGATCY 3 cut(s) 184, 1102, 1171
RsaI GTAC 5 cut(s) 481, 1084, 1666, 2191, 2592
RsaNI GTAC 5 cut(s) 480, 1083, 1665, 2190, 2591
RseI CAYNNNNRTG 2 cut(s) 2547, 3105
SacI GAGCTC 2 cut(s) 1392, 1816
SatI GCNGC 4 cut(s) 93, 652, 3111, 3187
Sau3AI GATC 8 cut(s) 142, 184, 937, 1102, 1171, 2346, 2572, 2665
Sau96I GGNCC 4 cut(s) 525, 706, 1140, 1401
SchI GAGTC 3 cut(s) 2426, 3057, 3134
ScrFI CCNGG 6 cut(s) 606, 972, 1136, 1137, 1181, 1283
SduI GDGCHC 6 cut(s) 693, 1392, 1493, 1816, 2026, 2363
SfaNI GCATC 7 cut(s) 1606, 1938, 2528, 2914, 3042, 3087, 3097
SfcI CTRYAG 4 cut(s) 90, 229, 2709, 3045
SfuI TTCGAA 1 cut(s) 2652
SinI GGWCC 4 cut(s) 525, 706, 1140, 1401
SmaI CCCGGG 1 cut(s) 1137
SmiMI CAYNNNNRTG 2 cut(s) 2547, 3105
SmlI CTYRAG 3 cut(s) 1817, 2342, 2362
SmoI CTYRAG 3 cut(s) 1817, 2342, 2362
SpeI ACTAGT 2 cut(s) 1085, 1667
SsiI CCGC 5 cut(s) 261, 652, 3055, 3094, 3110
SspI AATATT 4 cut(s) 766, 861, 895, 2503
SspMI CTAG 8 cut(s) 921, 1086, 1247, 1592, 1647, 1668, 2429, 2792
SstI GAGCTC 2 cut(s) 1392, 1816
StyD4I CCNGG 6 cut(s) 604, 970, 1134, 1135, 1179, 1281
StyI CCWWGG 3 cut(s) 18, 664, 3086
TaaI ACNGT 2 cut(s) 257, 2333
TaiI ACGT 4 cut(s) 2558, 2886, 2895, 2998
TaqI TCGA 6 cut(s) 159, 1981, 2652, 2916, 2922, 3191
TaqII GACCGA 1 cut(s) 745
TatI WGTACW 4 cut(s) 479, 1082, 1664, 2590
TauI GCSGC 2 cut(s) 654, 3113
TfiI GAWTC 9 cut(s) 86, 137, 211, 385, 506, 1024, 1131, 1350, 1786
TscAI CASTG 6 cut(s) 184, 598, 793, 1386, 1894, 3054
TseFI GTSAC 2 cut(s) 73, 471
TseI GCWGC 2 cut(s) 92, 3186
Tsp45I GTSAC 2 cut(s) 73, 471
TspGWI ACGGA 5 cut(s) 437, 1109, 1619, 2250, 3184
TspMI CCCGGG 1 cut(s) 1135
TspRI CASTG 6 cut(s) 184, 598, 793, 1386, 1894, 3054
Van91I CCANNNNNTGG 3 cut(s) 1436, 2732, 2887
Vha464I CTTAAG 1 cut(s) 1817
VneI GTGCAC 1 cut(s) 2022
VpaK11BI GGWCC 4 cut(s) 525, 706, 1140, 1401
XbaI TCTAGA 1 cut(s) 920
XceI RCATGY 4 cut(s) 81, 1399, 1956, 2830
XmaI CCCGGG 1 cut(s) 1135
XmiI GTMKAC 1 cut(s) 1423
XmnI GAANNNNTTC 1 cut(s) 622
XspI CTAG 8 cut(s) 921, 1086, 1247, 1592, 1647, 1668, 2429, 2792
Zsp2I ATGCAT 1 cut(s) 3102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.