MD12G1130800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
20587190 .. 20591744
4555 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1130800.v1.1.491

Sequence Viewer

Length: 3264 bp
ATGATACCAACGACTAGACTTGCATTATGCCAGCCTTGTTGTCAGTTTTGCGTCTTCCGAGCTACGCTTCGATGTTTGAGTTTAACTTCCAATGTAACTTATCATTTCAAAGCTTACTGCCAAAAGAGAGAAAAAAAACAGAGTTTCTTATTTGGAATCTATATTTTGGTGAGGATGGAGCATGCACGTACTACTGGAGGCAGGCTGAGTTTGGTTAAACTCTTTCATGGCATCATTCTTTTATGCATGAGCATGCATCTGGGATCTGCGGCACTCTCCAGCACTAGTCTTGGAAATGAAACTGATCGCATGGCACTACTCAACTTCAAGAAAAGCATCACTCAAGATCCCCTCCATGTCATGAGCTCATGGAATGAATCCGTCCATTTCTGCGGTTGGGTAGGCGTTGCGTGCAACCATTACACTAAAAGAGTCCTCATGTTGAACCTGCAAGATCAGAAATTGACAGGCTCTTTACCTCCTTCTATAGGAAATCTTTCCTATCTTGCTAGAATCAACCTAGGAAGCAACAGCTTTCGTGGTGAAATTCCTGAAGAAATTGGTCATCTGCAAAGCCTGCACTTTCTCAACTTGTCTCACAATTCCTTCAGTGGGAAAATGCCAACCAATTTATCCCAGTGTACACAACTAAAGACGATTGAGTTTCGTTACAATGAGCTTATTGGGTCAATTCCAAACCAACTCAGTTCCTTGTTGAAATTAAATCATATGGGGTTCGATCATAACAATCTCACCGGAAACATTCCGATTTGGATAGGGAACTTTTCTTCTCTGCATCACTTTGATCTTAGCTTTAACAACTTGCAAGGAAGCATACCCAAAGAGCTCGGGCGGCTAACAAGACTGCGAAGATTCACACTTCAAGGAGGCAATATCTCTGGTATAATCCCTGCTTCAATCTATAATATTACTTCCATATCAATGTTTGGTGTTGTTCAAAACCAACTGCATGGAGAGCTACCGCCAAATGTTGGCATTACTCTTCCTAATCTCCAAATATTTGCCGGTGGTGACAACAAATTCACAGGAAATATTCCTGTATCATTGTCAAATGCTTCTAGACTACAAGTTTTTTCCTTTCCTAAAAATGGTCTTACTGGAACACTCCCTGCTGAAAATTTTGGATCCTTACAAAGCTTAGTTAAGCTAAACCTTGGTGAAAATAGACTGGGAAGTGGGAAAGCTGGCGACCTTAACTTTCTCAAATTCTTGGCTAATTGTACAAGTCTTGAGTCGTTAATTCTTGCGGAAAATCAATTTGGAGGAGAATTGCCTGTGTCCATTTCCAATCTTTCTACCACATTAAGATCTTTTACTCTGGGGGTAAATTTGATACATGGAAACATCCCTTTGGGTATTGGAAATCTTGTAAACTTGACCACCATCCAAATGCAGTATAACTATTTCAGTGGTAGTCTCCCTGAAGAAATTGGGAGGCTTAAGAAGTTGAAAGGAATATTTTTGGGCGGCAACAATCTTTCTGGGCCAATCCCGTCGTCCCTAGGTAACTTGACTTCATTGTTAAAGCTCCATCTAGAATTCAATAGATTTGCGGGAAATATACCACCAAGTCTAGGAGATTGCCATAATCTACTACAGCTCGACTTTGATGGTAACAGTCTAACAGGCACCATACCTAGAGAGATTTTTGGGCTTTCATCCCTTTCAATTTTTTTGAGAATGTCTGACAATTATTTGATTGGTTCACTACCGTCTGAAGTTGGTCTTTTGGTAAATCTAGTAGAGCTAGATGTATCAGGAAACAATTTATCAGCTGAAATTCCCCCAACCCTTAGCAGTTGTATTATGCTGGTGAGTTTGTATTTGGGAGGTAATGAGTTTCAAGGAATAATTCCTCAATCTCTTAAAAGTTTAAGAAGCCTGGAAGAGATGGATCTTTCGCGCAATAACTTATTCGGGCAGATTCCTGAATTTCTAAGCAAGTTTAGATTTCTTAGGCATCTCAACCTTTCATATAACAATTTCGAGGGTAAAATGCCTGAAGAAGGAATTTTTTCAAATGCAACTGGTCTCTCAATTCTTGGAAATCCTAAGCTCTGTGGTGGCAGCTCGAAATTACATTTACCTGCTTGCCCCAACATAAAGCCTCATTCATCTCGAGGACTACTTGCCCGAAAAGTAGTCATCCCAGTAGCTTGTGCACTTGCCTTCATAATTGCTATGTCTTGCTCCATTGTTGCTTGCTCAATGCTTAAAAAGCGAAGAGGTATACCTACAACTTCACGTTCTTATAAGGATTGGAAATCAGGAGTCTCTTACTCAGAACTTTTTGAATCAACTAACGGGTTCTCTAGGGAAAATCTTATTGGTTCAGGAAGTTTTGGTTCGGTGTACAAAGGAATAGCCCCCGGTAATGGAACTCTAGTTGCAGTAAAGGTATTAAACCTTCAACAACAAGGAGCATCCAAGAGTTTTATGAATGAATGCAAAGCTTTGAGAAGAATAACACACCGTAATCTTCTCAAGGTCATAACTTCATGCTCAAGCATTGACAATCAGGGTCAAGATTTCAAAAGTCTAGTTTTTGAGTACATGGTGAATGGAAGCCTAGATATGTGGTTGCATCCGAGAGATGATGAGCAATCTCAAAGCAAGAGATTGAGCCTTATCCAAAGACTCAATATTGCAATTGATGTTGCTTTAGCATTGGATTATCTCCACCACCGTTGCGAAACTTCAATTGTTCATTGTGATATGAAGCCAAGTAATGTTCTTCTTGACGAAGATATGGTAGCTCACGTTGGTGACTTTGGTTTAGCAAGGTTCCTCTTGGCAGAGTCTGATGATCCATCTCAAAGTCAAACTATGTCAACCGGGTTAAGGGGTTCGATAGGTTACATTCCTCCAGAGTATGGCATGGGAGGTCAAGTTTCCATCTTTGGAGATATTTATAGCTTTGGAATATTGTTGCTAGAAATATTTACAGGAAGAAAACCTACAGATGACATGTTCAATGATGGTCTAAGCATTCGCCAGTTCGCTACCATGGCGATGCCTGACCATGCCATTGACATAGTTGACCCTTCATTGCTCATTGAATGTGGAGATGTAGATGGCAGCCAACTTGAAGCAAGAAGGTTGGAGGAATGCTCAGTTACAGTGATTCAAATCGGACTCTCATGCTCTGCAATATCACCGCCGAAGCGGATGCTTATGGATGTTGTTGTCAACAAATTGAAGAAAATTAGAGAATCATATCTCAATTTAAGAGGTAGAGGCTAG

Protein Analysis

1088

Amino Acids

119.3

Weight (kDa)

8.72

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 100 - 139 7.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 144 - 273 2.3e-07 Leucine-rich repeat region
LRR_14 PF23598 454 - 538 6e-06 Leucine-rich repeat region
LRR_14 PF23598 529 - 670 1.4e-08 Leucine-rich repeat region
LRR_8 PF13855 611 - 669 1.2e-07 Leucine rich repeat
Pkinase PF00069 778 - 1006 9e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 780 - 1002 8.7e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2274
Acc36I ACCTGC 2 cut(s) 456, 2116
AccB1I GGYRCC 1 cut(s) 1649
AccB7I CCANNNNNTGG 2 cut(s) 992, 2894
AccI GTMKAC 1 cut(s) 2251
AccII CGCG 1 cut(s) 1924
AciI CCGC 9 cut(s) 269, 393, 853, 983, 1268, 1488, 1574, 3179, 3187
AclWI GGATC 6 cut(s) 271, 341, 1140, 1153, 1923, 2822
AcsI RAATTY 9 cut(s) 546, 1040, 1138, 1226, 1348, 1559, 1800, 1952, 2031
AcuI CTGAAG 5 cut(s) 573, 592, 1464, 1758, 2043
AfaI GTAC 5 cut(s) 190, 643, 1243, 2375, 2573
AfiI CCNNNNNNNGG 9 cut(s) 488, 612, 992, 1109, 1595, 2027, 2396, 2862, 2894
AflII CTTAAG 1 cut(s) 1460
AflIII ACRYGT 1 cut(s) 2988
AhlI ACTAGT 1 cut(s) 284
AjnI CCWGG 1 cut(s) 1902
AjuI GAANNNNNNNTTGG 4 cut(s) 1263, 1295, 2331, 2363
AleI CACNNNNGTG 1 cut(s) 2784
Alw21I GWGCWC 3 cut(s) 368, 849, 2185
Alw26I GTCTC 4 cut(s) 600, 1442, 2057, 2299
Alw44I GTGCAC 1 cut(s) 2181
AlwI GGATC 6 cut(s) 271, 341, 1140, 1153, 1923, 2822
AlwNI CAGNNNCTG 1 cut(s) 2822
Ama87I CYCGRG 2 cut(s) 848, 2139
AoxI GGCC 1 cut(s) 1505
ApaLI GTGCAC 1 cut(s) 2181
ApeKI GCWGC 2 cut(s) 2088, 3099
ApoI RAATTY 9 cut(s) 546, 1040, 1138, 1226, 1348, 1559, 1800, 1952, 2031
Asp700I GAANNNNTTC 2 cut(s) 496, 2035
AspA2I CCTAGG 2 cut(s) 520, 1522
AspLEI GCGC 1 cut(s) 1926
AspS9I GGNCC 1 cut(s) 1505
AsuC2I CCSGG 2 cut(s) 2391, 2857
AsuHPI GGTGA 9 cut(s) 181, 554, 745, 1043, 1190, 1846, 2590, 2798, 3168
AvaI CYCGRG 2 cut(s) 848, 2139
AvrII CCTAGG 2 cut(s) 520, 1522
BaeGI GKGCMC 1 cut(s) 2185
BamHI GGATCC 1 cut(s) 1145
BanI GGYRCC 1 cut(s) 1649
BanII GRGCYC 2 cut(s) 368, 849
BarI GAAGNNNNNNTAC 6 cut(s) 1519, 1551, 2412, 2444, 2962, 2994
BbsI GAAGAC 1 cut(s) 46
Bbv12I GWGCWC 3 cut(s) 368, 849, 2185
BbvI GCAGC 2 cut(s) 2100, 3111
BccI CCATC 9 cut(s) 169, 1412, 1560, 1625, 1906, 2839, 2924, 2993, 3089
BcgI CGANNNNNNTGC 2 cut(s) 3172, 3206
BciT130I CCWGG 1 cut(s) 1904
BcnI CCSGG 2 cut(s) 2391, 2857
BcoDI GTCTC 4 cut(s) 600, 1442, 2057, 2299
BcuI ACTAGT 1 cut(s) 284
BfmI CTRYAG 3 cut(s) 486, 1616, 2979
BfrI CTTAAG 1 cut(s) 1460
BfuAI ACCTGC 2 cut(s) 456, 2116
BglII AGATCT 1 cut(s) 1328
BisI GCNGC 5 cut(s) 270, 854, 1489, 2089, 3100
BlnI CCTAGG 2 cut(s) 520, 1522
BlsI GCNGC 5 cut(s) 271, 855, 1490, 2090, 3101
Bme1390I CCNGG 3 cut(s) 1904, 2391, 2857
BmeT110I CYCGRG 2 cut(s) 848, 2139
BmgT120I GGNCC 1 cut(s) 1505
BmiI GGNNCC 3 cut(s) 1147, 1651, 2807
BmrFI CCNGG 3 cut(s) 1904, 2391, 2857
BmrI ACTGGG 3 cut(s) 631, 1199, 2165
BmsI GCATC 9 cut(s) 240, 265, 345, 805, 1990, 2453, 2614, 3024, 3180
BmuI ACTGGG 3 cut(s) 631, 1199, 2165
BpiI GAAGAC 1 cut(s) 46
BplI GAGNNNNNCTC 2 cut(s) 3116, 3148
BpmI CTGGAG 3 cut(s) 216, 262, 2871
Bpu10I CCTNAGC 2 cut(s) 1814, 2073
BpuEI CTTGAG 4 cut(s) 327, 1271, 2489, 2509
BpuMI CCSGG 2 cut(s) 2391, 2857
BsaAI YACGTR 1 cut(s) 188
BsaBI GATNNNNATC 1 cut(s) 3149
BsaI GGTCTC 1 cut(s) 2057
BsaJI CCNNGG 5 cut(s) 520, 1174, 1522, 2389, 3027
BsaWI WCCGGW 1 cut(s) 755
BsaXI ACNNNNNCTCC 2 cut(s) 2895, 2925
Bsc4I CCNNNNNNNGG 9 cut(s) 488, 612, 992, 1109, 1595, 2027, 2396, 2862, 2894
Bse118I RCCGGY 1 cut(s) 1025
Bse1I ACTGG 7 cut(s) 199, 637, 1123, 1194, 2053, 2171, 3016
Bse3DI GCAATG 1 cut(s) 3068
Bse8I GATNNNNATC 1 cut(s) 3149
BseBI CCWGG 1 cut(s) 1904
BseDI CCNNGG 5 cut(s) 520, 1174, 1522, 2389, 3027
BseGI GGATG 9 cut(s) 180, 1365, 1404, 1679, 2166, 2444, 2605, 3195, 3205
BseJI GATNNNNATC 1 cut(s) 3149
BseLI CCNNNNNNNGG 9 cut(s) 488, 612, 992, 1109, 1595, 2027, 2396, 2862, 2894
BseMI GCAATG 1 cut(s) 3068
BseMII CTCAG 4 cut(s) 197, 718, 2316, 3147
BseNI ACTGG 7 cut(s) 199, 637, 1123, 1194, 2053, 2171, 3016
BseRI GAGGAG 1 cut(s) 1299
BseSI GKGCMC 1 cut(s) 2185
BseXI GCAGC 2 cut(s) 2100, 3111
BsgI GTGCAG 1 cut(s) 563
Bsh1236I CGCG 1 cut(s) 1924
BshFI GGCC 1 cut(s) 1507
BshNI GGYRCC 1 cut(s) 1649
BsiHKAI GWGCWC 3 cut(s) 368, 849, 2185
BsiHKCI CYCGRG 2 cut(s) 848, 2139
BsiSI CCGG 4 cut(s) 756, 1026, 2391, 2856
BslFI GGGAC 1 cut(s) 1504
BslI CCNNNNNNNGG 9 cut(s) 488, 612, 992, 1109, 1595, 2027, 2396, 2862, 2894
BsmAI GTCTC 4 cut(s) 600, 1442, 2057, 2299
BsmFI GGGAC 1 cut(s) 1504
BsmI GAATGC 3 cut(s) 2471, 3009, 3134
BsnI GGCC 1 cut(s) 1507
Bso31I GGTCTC 1 cut(s) 2057
BsoBI CYCGRG 2 cut(s) 848, 2139
Bsp1286I GDGCHC 3 cut(s) 368, 849, 2185
Bsp1407I TGTACA 3 cut(s) 641, 1241, 2373
Bsp19I CCATGG 1 cut(s) 3027
BspACI CCGC 9 cut(s) 269, 393, 853, 983, 1268, 1488, 1574, 3179, 3187
BspANI GGCC 1 cut(s) 1507
BspCNI CTCAG 4 cut(s) 198, 717, 2315, 3146
BspFNI CGCG 1 cut(s) 1924
BspHI TCATGA 1 cut(s) 360
BspLI GGNNCC 3 cut(s) 1147, 1651, 2807
BspMI ACCTGC 2 cut(s) 456, 2116
BspPI GGATC 6 cut(s) 271, 341, 1140, 1153, 1923, 2822
BspT107I GGYRCC 1 cut(s) 1649
BspTI CTTAAG 1 cut(s) 1460
BspTNI GGTCTC 1 cut(s) 2057
BsrDI GCAATG 1 cut(s) 3068
BsrFI RCCGGY 1 cut(s) 1025
BsrGI TGTACA 3 cut(s) 641, 1241, 2373
BsrI ACTGG 7 cut(s) 199, 637, 1123, 1194, 2053, 2171, 3016
BssAI RCCGGY 1 cut(s) 1025
BssECI CCNNGG 5 cut(s) 520, 1174, 1522, 2389, 3027
BssNAI GTATAC 1 cut(s) 2252
BssT1I CCWWGG 4 cut(s) 520, 1174, 1522, 3027
Bst1107I GTATAC 1 cut(s) 2252
Bst2UI CCWGG 1 cut(s) 1904
Bst4CI ACNGT 5 cut(s) 1640, 1734, 2495, 2708, 3142
Bst6I CTCTTC 3 cut(s) 1008, 1902, 2239
BstAFI CTTAAG 1 cut(s) 1460
BstAPI GCANNNNNTGC 1 cut(s) 577
BstAUI TGTACA 3 cut(s) 641, 1241, 2373
BstBAI YACGTR 1 cut(s) 188
BstC8I GCNNGC 9 cut(s) 32, 183, 203, 254, 412, 578, 1207, 2113, 2224
BstDSI CCRYGG 1 cut(s) 3027
BstENI CCTNNNNNAGG 2 cut(s) 486, 2025
BstF5I GGATG 9 cut(s) 180, 1365, 1404, 1679, 2166, 2444, 2605, 3195, 3205
BstFNI CGCG 1 cut(s) 1924
BstHHI GCGC 1 cut(s) 1926
BstMAI GTCTC 4 cut(s) 600, 1442, 2057, 2299
BstMWI GCNNNNNNNGC 6 cut(s) 411, 577, 853, 976, 2239, 3029
BstNI CCWGG 1 cut(s) 1904
BstNSI RCATGY 3 cut(s) 185, 256, 2992
BstSCI CCNGG 3 cut(s) 1902, 2389, 2855
BstSFI CTRYAG 3 cut(s) 486, 1616, 2979
BstSLI GKGCMC 1 cut(s) 2185
BstUI CGCG 1 cut(s) 1924
BstV1I GCAGC 2 cut(s) 2100, 3111
BstV2I GAAGAC 1 cut(s) 46
BstX2I RGATCY 5 cut(s) 263, 346, 1145, 1328, 1915
BstXI CCANNNNNNTGG 1 cut(s) 971
BstYI RGATCY 5 cut(s) 263, 346, 1145, 1328, 1915
BstZ17I GTATAC 1 cut(s) 2252
BsuRI GGCC 1 cut(s) 1507
BtgI CCRYGG 1 cut(s) 3027
BtgZI GCGATG 1 cut(s) 3047
BtsCI GGATG 9 cut(s) 180, 1365, 1404, 1679, 2166, 2444, 2605, 3195, 3205
BtsIMutI CAGTG 4 cut(s) 616, 644, 1435, 3147
BveI ACCTGC 2 cut(s) 456, 2116
Cac8I GCNNGC 9 cut(s) 32, 183, 203, 254, 412, 578, 1207, 2113, 2224
CaiI CAGNNNCTG 1 cut(s) 2822
CciI TCATGA 1 cut(s) 360
CfoI GCGC 1 cut(s) 1926
Cfr10I RCCGGY 1 cut(s) 1025
Cfr13I GGNCC 1 cut(s) 1505
CseI GACGC 1 cut(s) 40
Csp6I GTAC 5 cut(s) 189, 642, 1242, 2374, 2572
CspCI CAANNNNNGTGG 2 cut(s) 2690, 2725
CviQI GTAC 5 cut(s) 189, 642, 1242, 2374, 2572
Eam1104I CTCTTC 3 cut(s) 1008, 1902, 2239
EarI CTCTTC 3 cut(s) 1008, 1902, 2239
Ecl136II GAGCTC 2 cut(s) 366, 847
Eco130I CCWWGG 4 cut(s) 520, 1174, 1522, 3027
Eco24I GRGCYC 2 cut(s) 368, 849
Eco31I GGTCTC 1 cut(s) 2057
Eco53kI GAGCTC 2 cut(s) 366, 847
Eco57I CTGAAG 5 cut(s) 573, 592, 1464, 1758, 2043
Eco88I CYCGRG 2 cut(s) 848, 2139
EcoICRI GAGCTC 2 cut(s) 366, 847
EcoNI CCTNNNNNAGG 2 cut(s) 486, 2025
EcoRI GAATTC 1 cut(s) 1559
EcoRII CCWGG 1 cut(s) 1902
EcoT14I CCWWGG 4 cut(s) 520, 1174, 1522, 3027
EcoT22I ATGCAT 2 cut(s) 248, 258
EcoT38I GRGCYC 2 cut(s) 368, 849
ErhI CCWWGG 4 cut(s) 520, 1174, 1522, 3027
FalI AAGNNNNNCTT 2 cut(s) 1731, 1763
FaqI GGGAC 1 cut(s) 1504
FauI CCCGC 1 cut(s) 1567
FauNDI CATATG 1 cut(s) 729
FblI GTMKAC 1 cut(s) 2251
Fnu4HI GCNGC 5 cut(s) 270, 854, 1489, 2089, 3100
FokI GGATG 9 cut(s) 187, 1352, 1391, 1666, 2153, 2431, 2592, 3202, 3212
FriOI GRGCYC 2 cut(s) 368, 849
Fsp4HI GCNGC 5 cut(s) 270, 854, 1489, 2089, 3100
GlaI GCGC 1 cut(s) 1925
GluI GCNGC 5 cut(s) 270, 854, 1489, 2089, 3100
GsuI CTGGAG 3 cut(s) 216, 262, 2871
HaeIII GGCC 1 cut(s) 1507
HapII CCGG 4 cut(s) 756, 1026, 2391, 2856
HgaI GACGC 1 cut(s) 40
HhaI GCGC 1 cut(s) 1926
Hin6I GCGC 1 cut(s) 1924
HinP1I GCGC 1 cut(s) 1924
HincII GTYRAC 3 cut(s) 2853, 3061, 3211
HindII GTYRAC 3 cut(s) 2853, 3061, 3211
HindIII AAGCTT 3 cut(s) 111, 1156, 2472
HpaII CCGG 4 cut(s) 756, 1026, 2391, 2856
HphI GGTGA 9 cut(s) 181, 554, 745, 1043, 1190, 1846, 2590, 2798, 3168
Hpy188I TCNGA 9 cut(s) 59, 459, 768, 1708, 1738, 2305, 2610, 2824, 3155
Hpy99I CGWCG 1 cut(s) 1519
HpyAV CCTTC 7 cut(s) 492, 616, 2021, 2200, 2438, 3075, 3111
HpyCH4III ACNGT 5 cut(s) 1640, 1734, 2495, 2708, 3142
HpyCH4IV ACGT 3 cut(s) 187, 2266, 2781
HpyF10VI GCNNNNNNNGC 6 cut(s) 411, 577, 853, 976, 2239, 3029
HpySE526I ACGT 3 cut(s) 187, 2266, 2781
HspAI GCGC 1 cut(s) 1924
LmnI GCTCC 4 cut(s) 178, 1554, 2216, 2441
Lsp1109I GCAGC 2 cut(s) 2100, 3111
LweI GCATC 9 cut(s) 240, 265, 345, 805, 1990, 2453, 2614, 3024, 3180
MaeII ACGT 3 cut(s) 187, 2266, 2781
MaeIII GTNAC 8 cut(s) 94, 668, 1031, 1526, 1634, 2786, 2876, 3136
MfeI CAATTG 2 cut(s) 2670, 2721
MflI RGATCY 5 cut(s) 263, 346, 1145, 1328, 1915
MhlI GDGCHC 3 cut(s) 368, 849, 2185
MlyI GAGTC 6 cut(s) 441, 1262, 2301, 2652, 2828, 3150
MmeI TCCRAC 1 cut(s) 3102
Mph1103I ATGCAT 2 cut(s) 248, 258
MroXI GAANNNNTTC 2 cut(s) 496, 2035
MslI CAYNNNNRTG 5 cut(s) 251, 941, 1409, 2784, 3032
MspA1I CMGCKG 1 cut(s) 1796
MspCI CTTAAG 1 cut(s) 1460
MspI CCGG 4 cut(s) 756, 1026, 2391, 2856
MspR9I CCNGG 3 cut(s) 1904, 2391, 2857
MunI CAATTG 2 cut(s) 2670, 2721
Mva1269I GAATGC 3 cut(s) 2471, 3009, 3134
MvaI CCWGG 1 cut(s) 1904
MvnI CGCG 1 cut(s) 1924
MwoI GCNNNNNNNGC 6 cut(s) 411, 577, 853, 976, 2239, 3029
NciI CCSGG 2 cut(s) 2391, 2857
NcoI CCATGG 1 cut(s) 3027
NdeI CATATG 1 cut(s) 729
NlaIV GGNNCC 3 cut(s) 1147, 1651, 2807
NmuCI GTSAC 2 cut(s) 1031, 2786
NsiI ATGCAT 2 cut(s) 248, 258
NspI RCATGY 3 cut(s) 185, 256, 2992
OliI CACNNNNGTG 1 cut(s) 2784
PaeI GCATGC 2 cut(s) 185, 256
PaeR7I CTCGAG 1 cut(s) 2139
PagI TCATGA 1 cut(s) 360
PciI ACATGT 1 cut(s) 2988
PctI GAATGC 3 cut(s) 2471, 3009, 3134
PdmI GAANNNNTTC 2 cut(s) 496, 2035
PfeI GAWTC 8 cut(s) 156, 377, 513, 873, 1945, 2315, 3145, 3233
PflMI CCANNNNNTGG 2 cut(s) 992, 2894
PkrI GCNGC 5 cut(s) 271, 855, 1490, 2090, 3101
PleI GAGTC 6 cut(s) 440, 1261, 2300, 2652, 2827, 3150
PpsI GAGTC 6 cut(s) 440, 1261, 2300, 2652, 2827, 3150
Ppu21I YACGTR 1 cut(s) 188
PscI ACATGT 1 cut(s) 2988
PsiI TTATAA 1 cut(s) 2274
Psp124BI GAGCTC 2 cut(s) 368, 849
Psp6I CCWGG 1 cut(s) 1902
PspGI CCWGG 1 cut(s) 1902
PspN4I GGNNCC 3 cut(s) 1147, 1651, 2807
PspPI GGNCC 1 cut(s) 1505
PstNI CAGNNNCTG 1 cut(s) 2822
PsuI RGATCY 5 cut(s) 263, 346, 1145, 1328, 1915
PvuII CAGCTG 1 cut(s) 1796
RsaI GTAC 5 cut(s) 190, 643, 1243, 2375, 2573
RsaNI GTAC 5 cut(s) 189, 642, 1242, 2374, 2572
RseI CAYNNNNRTG 5 cut(s) 251, 941, 1409, 2784, 3032
SacI GAGCTC 2 cut(s) 368, 849
SatI GCNGC 5 cut(s) 270, 854, 1489, 2089, 3100
Sau96I GGNCC 1 cut(s) 1505
SchI GAGTC 6 cut(s) 441, 1262, 2301, 2652, 2828, 3150
ScrFI CCNGG 3 cut(s) 1904, 2391, 2857
SduI GDGCHC 3 cut(s) 368, 849, 2185
SfaNI GCATC 9 cut(s) 240, 265, 345, 805, 1990, 2453, 2614, 3024, 3180
SfcI CTRYAG 3 cut(s) 486, 1616, 2979
Sfr274I CTCGAG 1 cut(s) 2139
SlaI CTCGAG 1 cut(s) 2139
SmiMI CAYNNNNRTG 5 cut(s) 251, 941, 1409, 2784, 3032
SmlI CTYRAG 6 cut(s) 342, 1250, 1460, 2139, 2504, 2524
SmoI CTYRAG 6 cut(s) 342, 1250, 1460, 2139, 2504, 2524
SpeI ACTAGT 1 cut(s) 284
SphI GCATGC 2 cut(s) 185, 256
SsiI CCGC 9 cut(s) 269, 393, 853, 983, 1268, 1488, 1574, 3179, 3187
SspI AATATT 7 cut(s) 928, 1020, 1054, 1479, 2665, 2946, 2961
SstI GAGCTC 2 cut(s) 368, 849
StyD4I CCNGG 3 cut(s) 1902, 2389, 2855
StyI CCWWGG 4 cut(s) 520, 1174, 1522, 3027
TaaI ACNGT 5 cut(s) 1640, 1734, 2495, 2708, 3142
TaiI ACGT 3 cut(s) 190, 2269, 2784
TaqI TCGA 7 cut(s) 70, 738, 1623, 2007, 2093, 2140, 2870
TatI WGTACW 4 cut(s) 641, 1241, 2373, 2571
TauI GCSGC 3 cut(s) 272, 856, 1491
TfiI GAWTC 8 cut(s) 156, 377, 513, 873, 1945, 2315, 3145, 3233
TscAI CASTG 4 cut(s) 616, 644, 1435, 3147
TseFI GTSAC 2 cut(s) 1031, 2786
TseI GCWGC 2 cut(s) 2088, 3099
Tsp45I GTSAC 2 cut(s) 1031, 2786
TspGWI ACGGA 1 cut(s) 370
TspRI CASTG 4 cut(s) 616, 644, 1435, 3147
Van91I CCANNNNNTGG 2 cut(s) 992, 2894
Vha464I CTTAAG 1 cut(s) 1460
VneI GTGCAC 1 cut(s) 2181
XagI CCTNNNNNAGG 2 cut(s) 486, 2025
XapI RAATTY 9 cut(s) 546, 1040, 1138, 1226, 1348, 1559, 1800, 1952, 2031
XbaI TCTAGA 2 cut(s) 1079, 1555
XceI RCATGY 3 cut(s) 185, 256, 2992
XhoI CTCGAG 1 cut(s) 2139
XmaJI CCTAGG 2 cut(s) 520, 1522
XmiI GTMKAC 1 cut(s) 2251
XmnI GAANNNNTTC 2 cut(s) 496, 2035
Zsp2I ATGCAT 2 cut(s) 248, 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.