MD04G1156000.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
24369959 .. 24373277
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1156000.v1.1.491

Sequence Viewer

Length: 2805 bp
ATGGAGCATTCACGTACCAATGGAAAGCTTGTTTTATTGAAATTCCTGCATGGTTTCATTCTTTTATGGATGATCACATGTCCGGAATCTGCAGCACTTCACAGCCCTACTCTGCTTGGAAACGAATCTGACCGCTTGGCTTTGCTTGATTTCAAGAAAAGAATAACTGGAGATCCTCTCAATGTCATGAGCTCATGGAATCATTCCACCGATATCTGCAGTTGGTTTGGGGTTTCTTGTCACCGTTCCACCAAAAGAGTCTTGACGTTGAACCTAGAAGCTCAAAAATTGGTAGGCTCCCTACCACCTTCCATTGGAAATCTTACTTACATCACTAGACTCAACCTGGGAAAAAACATGTTTCATGGTGAAATTCCTCAAGAAATAGGTCGTCTAAGAAGCTTGCAATACCTCAACCTGTCTAGCAATTCTTTCAGCGGGAAAATTCCAACTAATATATCGCACTGCGCACAACTAAGAATGCTTAATCTTGAAGTCAATGGGATTACTGGGTCAATTCCAATCCAACTCATTTCATTGTTGCGTTTAACTCATCTGAGGCTTTCAAGTAACAATCTCAGTGGAACCATCCCAGGTTGGATAGGAAACTTTTCTTCTTTGACTAGACTTCATCTTGGCGACAATAATTTGCAAGGAAGCATACCCACTGAGCTTGCGCATATAACAGGCTTGGATAGCCTCATAGTTTCAGAGAATAATCTGTCTGGTATGGTTCCATCTAGAATCTATAATATTTCTTCCATACGTTATATCAGTGTTTCTGTCAACCAGTTGCATGGAGAGCTACCACCAAATCTCGGCACTATGCTTCCTAATCTCGTAGGATTTTACTGCTTTATGAACAAATTCAGAGGAAATATTCCTGCATCATTTTCCAATGCTTCTAGATTTCAATTGCTTGATCTTGGTATGAATTGGCTTACTGGGACACTCCCTGGTGAAAGTCTAGGAAGCTTGCGAAGCTTAGTTAAGTTAAGCGTTGAAGGCAATCAACTAGGAAAAAGGAAGGTTGGTGACTTGAATTTTCTCAGTTTCTTGGCTAATTGCACTAGTTTGGAGCATTTGGGTCTTGGCTTTAATAATTTTGGTGGAGGAATTCCGGGATCCATAGCCAACCTTTCGACCCAACTTCATTATCTTAGTCTGGGGGGAAATGTTATACATGGAAGCCTCCCTAACGGCATTGGAAATCTTATAAACTTGACCTTTCTAGCATTAGAACATAACCATTTGGGCGGTATTGTCCCTGATGAAATTGGGAAGCTAAAGAAGTTAGAGCAACTGTATTTGGATGTTAACCAATTTTCTGGGTCAATCCCATCTTCCCTTGGTAACATGACTTCATTGTTAAACCTCTACATGGAGTCTAACGGGTTTGAGGGAAGTATACCTCCAAGTCTTGGAAACTGCCAAAACCTATTGGATCTTGACCTTTCAAATAACAACCTTACGGGCACCATACCTAAAATGCTTATGAAGCTTTCAACCCTTTCAATTTCTTTAGACCTGTCTGACAATTATTTGACTGGTCCACTGCCCTTTGAAGTGGGTGATTTAGTGCATCTCATGGAGCTAAATGTATTAAGAAACAATTTATCTGGTGAAATCCCGAGCAGCCTCGGCAGTTGTGCTAGTTTGGAGCACTTGTATTTGCAAGGTAATAAGTTTCAAGGAACAATTCCTCAATCTCTTAAAGATTTAAAAGCCTTGGAAAAACTTGATCTTTCAAGCAACAACTTGTCTGGTCAAATTCCTGAATTCATAGGCAAGCTTGGTGCTCTCAAGTATCTCAATCTTTCATATAATGATTTTGAGGGCGAGTTGCCTAAAGAAGGTATTTTTGCAAATGTAAGTGGTGTCTCTGTTCTTGGGAATCATAGGCTTTGTGATGGCATCCCACAATTACATCTACCTCCATGCCCCCCAAAAAAACACCACTCATCTCGAGGATTACATTCCCCAAAAGTAGTCATCCCCATAGCCTGTGTACTTGGAATCATAATTGCTTTATCTTGCTTCTTTGGTGCTTGTTCAAAGCTAAAAAGGTCAAGAGATAGACTTGCAACTTCACGTTCTTATAAGGATTGGAAATTAGGTGTCTATTACTCACAACTTGTTGAATCAACTAACGGGTTCTCTCTGGATAATCTTATTGGTTTGGGAAGTTTTGGTTCTGTTTATAAAGGGGTAATTCCTAGTGATGGAACAGTAGTTGCTGTTAAGCCAAGCAACGTACTTCTTGATGAAGATATGGTAGCTCATGTTGGGGATTTTGGTTTAGCAAGGTTCCTCTTTGAAACATCAGATGACCCCTCATTCAGTCAAACAATGTCATCTCAGCTCAAGGGTTCTATAGGCTACATTCCTCCAGAGTACGGCACAGGAGGCCAAGTTTCCATACTTGGAGATGTTTACAGCTATGGGATACTATTGCTGGAAATGTTCACAAGAAAAAGACCTACCAATGACATGTTTAAAGGTGGTCTAAGCATTTACCAATTTGTACCCATGGCTTTGCCTGACCATGTCATGGACGTTGTTGACCATTCAATTATCCTCGACCTCGAAACAGATGGTGATGTCAACAATGACATAGTGCGAGAACAAACTCCATCCAGACGTAACAATGGTGGCTCGGTGAAAGCAATGAAATTAAAGGAATGCTTGGTTTCAGTGATGCAGATAGGACTCTCTTGTTGTGCAATGTCACCAAGGGAGCGGATGCTGATGGACGTGGTTGTCAGAAAAATGAGCGCAATCAGAGACTCGTACCTTAAAGTTTAA

Protein Analysis

935

Amino Acids

101.81

Weight (kDa)

7.6

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 80 1.8e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 89 - 166 9.4e-06 Leucine-rich repeat region
LRR_8 PF13855 111 - 169 2.1e-06 Leucine rich repeat
LRR_14 PF23598 127 - 339 1.7e-11 Leucine-rich repeat region
LRR_8 PF13855 182 - 241 3.1e-08 Leucine rich repeat
LRR_14 PF23598 382 - 498 3.2e-10 Leucine-rich repeat region
LRR_14 PF23598 470 - 610 2e-09 Leucine-rich repeat region
LRR_4 PF12799 552 - 594 1.7e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 561 - 611 1.1e-06 Leucine rich repeat
Pkinase PF00069 747 - 829 3.2e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 750 - 831 5.8e-11 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1217, 2100, 2202
AasI GACNNNNNNGTC 1 cut(s) 2759
Acc16I TGCGCA 2 cut(s) 469, 678
AccB1I GGYRCC 1 cut(s) 1475
AccB7I CCANNNNNTGG 2 cut(s) 1421, 2551
AccBSI CCGCTC 1 cut(s) 2740
AccI GTMKAC 1 cut(s) 1408
AccIII TCCGGA 1 cut(s) 82
AciI CCGC 4 cut(s) 133, 438, 1257, 2740
AclWI GGATC 4 cut(s) 167, 1119, 1132, 1452
AcsI RAATTY 8 cut(s) 41, 372, 444, 866, 1042, 1116, 1770, 1778
AfaI GTAC 6 cut(s) 16, 2010, 2256, 2396, 2526, 2792
AfiI CCNNNNNNNGG 8 cut(s) 314, 818, 1381, 1421, 1853, 2222, 2396, 2551
AflIII ACRYGT 3 cut(s) 77, 357, 2490
AhlI ACTAGT 1 cut(s) 1070
AjiI CACGTC 1 cut(s) 2755
AjnI CCWGG 3 cut(s) 345, 592, 955
Alw21I GWGCWC 3 cut(s) 194, 1665, 1801
Alw26I GTCTC 2 cut(s) 1885, 2778
AlwI GGATC 4 cut(s) 167, 1119, 1132, 1452
Ama87I CYCGRG 2 cut(s) 1630, 1965
Aor13HI TCCGGA 1 cut(s) 82
AoxI GGCC 1 cut(s) 2407
ApeKI GCWGC 2 cut(s) 92, 1635
ApoI RAATTY 8 cut(s) 41, 372, 444, 866, 1042, 1116, 1770, 1778
Asp700I GAANNNNTTC 2 cut(s) 610, 866
AspLEI GCGC 3 cut(s) 470, 679, 2777
AspS9I GGNCC 1 cut(s) 1550
AsuC2I CCSGG 1 cut(s) 1122
AsuHPI GGTGA 9 cut(s) 233, 380, 971, 1046, 1583, 1634, 2609, 2671, 2721
AvaI CYCGRG 2 cut(s) 1630, 1965
AvaII GGWCC 1 cut(s) 1550
BaeGI GKGCMC 1 cut(s) 1478
BamHI GGATCC 1 cut(s) 1124
BanI GGYRCC 1 cut(s) 1475
BanII GRGCYC 1 cut(s) 194
BarI GAAGNNNNNNTAC 2 cut(s) 1345, 1377
Bbv12I GWGCWC 3 cut(s) 194, 1665, 1801
BbvI GCAGC 2 cut(s) 104, 1647
BccI CCATC 8 cut(s) 596, 745, 1348, 1904, 2216, 2588, 2641, 2743
BceAI ACGGC 2 cut(s) 1216, 2413
BciT130I CCWGG 3 cut(s) 347, 594, 957
BciVI GTATCC 1 cut(s) 2439
BclI TGATCA 1 cut(s) 72
BcnI CCSGG 1 cut(s) 1122
BcoDI GTCTC 2 cut(s) 1885, 2778
BcuI ACTAGT 1 cut(s) 1070
BfmI CTRYAG 3 cut(s) 90, 217, 2373
BfuI GTATCC 1 cut(s) 2439
BisI GCNGC 2 cut(s) 93, 1636
BlsI GCNGC 2 cut(s) 94, 1637
Bme1390I CCNGG 4 cut(s) 347, 594, 957, 1122
Bme18I GGWCC 1 cut(s) 1550
BmeT110I CYCGRG 2 cut(s) 1630, 1965
BmgBI CACGTC 1 cut(s) 2755
BmgT120I GGNCC 1 cut(s) 1550
BmiI GGNNCC 6 cut(s) 298, 586, 735, 1126, 1477, 2309
BmrFI CCNGG 4 cut(s) 347, 594, 957, 1122
BmrI ACTGGG 2 cut(s) 519, 954
BmsI GCATC 5 cut(s) 896, 1591, 1923, 2688, 2733
BmuI ACTGGG 2 cut(s) 519, 954
BplI GAGNNNNNCTC 2 cut(s) 162, 194
BpmI CTGGAG 2 cut(s) 189, 2373
BpuEI CTTGAG 3 cut(s) 363, 1787, 2348
BpuMI CCSGG 1 cut(s) 1122
BsaAI YACGTR 1 cut(s) 14
BsaJI CCNNGG 8 cut(s) 346, 592, 955, 1348, 1639, 1728, 2529, 2732
BsaWI WCCGGW 1 cut(s) 82
BsaXI ACNNNNNCTCC 4 cut(s) 1652, 1682, 2397, 2427
Bsc4I CCNNNNNNNGG 8 cut(s) 314, 818, 1381, 1421, 1853, 2222, 2396, 2551
Bse1I ACTGG 5 cut(s) 172, 514, 790, 949, 1552
Bse3DI GCAATG 2 cut(s) 2673, 2730
BseAI TCCGGA 1 cut(s) 82
BseBI CCWGG 3 cut(s) 347, 594, 957
BseDI CCNNGG 8 cut(s) 346, 592, 955, 1348, 1639, 1728, 2529, 2732
BseGI GGATG 7 cut(s) 75, 588, 1318, 1914, 1992, 2633, 2748
BseLI CCNNNNNNNGG 8 cut(s) 314, 818, 1381, 1421, 1853, 2222, 2396, 2551
BseMI GCAATG 2 cut(s) 2673, 2730
BseMII CTCAG 5 cut(s) 548, 592, 660, 1063, 2372
BseNI ACTGG 5 cut(s) 172, 514, 790, 949, 1552
BseSI GKGCMC 1 cut(s) 1478
BseXI GCAGC 2 cut(s) 104, 1647
BshFI GGCC 1 cut(s) 2409
BshNI GGYRCC 1 cut(s) 1475
BsiHKAI GWGCWC 3 cut(s) 194, 1665, 1801
BsiHKCI CYCGRG 2 cut(s) 1630, 1965
BsiSI CCGG 2 cut(s) 83, 1121
BslFI GGGAC 2 cut(s) 961, 1250
BslI CCNNNNNNNGG 8 cut(s) 314, 818, 1381, 1421, 1853, 2222, 2396, 2551
BsmAI GTCTC 2 cut(s) 1885, 2778
BsmFI GGGAC 2 cut(s) 961, 1250
BsmI GAATGC 3 cut(s) 7, 486, 2687
BsnI GGCC 1 cut(s) 2409
BsoBI CYCGRG 2 cut(s) 1630, 1965
Bsp1286I GDGCHC 4 cut(s) 194, 1478, 1665, 1801
Bsp13I TCCGGA 1 cut(s) 82
Bsp143I GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
Bsp19I CCATGG 1 cut(s) 2529
BspACI CCGC 4 cut(s) 133, 438, 1257, 2740
BspANI GGCC 1 cut(s) 2409
BspCNI CTCAG 5 cut(s) 549, 591, 661, 1062, 2371
BspEI TCCGGA 1 cut(s) 82
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 6 cut(s) 298, 586, 735, 1126, 1477, 2309
BspMAI CTGCAG 2 cut(s) 94, 221
BspPI GGATC 4 cut(s) 167, 1119, 1132, 1452
BspT107I GGYRCC 1 cut(s) 1475
BsrBI CCGCTC 1 cut(s) 2740
BsrDI GCAATG 2 cut(s) 2673, 2730
BsrI ACTGG 5 cut(s) 172, 514, 790, 949, 1552
BssECI CCNNGG 8 cut(s) 346, 592, 955, 1348, 1639, 1728, 2529, 2732
BssMI GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
BssNAI GTATAC 1 cut(s) 1409
BssT1I CCWWGG 4 cut(s) 1348, 1728, 2529, 2732
Bst1107I GTATAC 1 cut(s) 1409
Bst2UI CCWGG 3 cut(s) 347, 594, 957
Bst4CI ACNGT 3 cut(s) 245, 1305, 2230
BstBAI YACGTR 1 cut(s) 14
BstC8I GCNNGC 4 cut(s) 404, 675, 977, 1790
BstDSI CCRYGG 1 cut(s) 2529
BstENI CCTNNNNNAGG 1 cut(s) 1851
BstF5I GGATG 7 cut(s) 75, 588, 1318, 1914, 1992, 2633, 2748
BstHHI GCGC 3 cut(s) 470, 679, 2777
BstKTI GATC 6 cut(s) 75, 175, 925, 1127, 1447, 1744
BstMAI GTCTC 2 cut(s) 1885, 2778
BstMBI GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
BstMWI GCNNNNNNNGC 7 cut(s) 696, 802, 981, 1005, 1498, 1641, 2406
BstNI CCWGG 3 cut(s) 347, 594, 957
BstNSI RCATGY 3 cut(s) 81, 361, 2494
BstSCI CCNGG 4 cut(s) 345, 592, 955, 1120
BstSFI CTRYAG 3 cut(s) 90, 217, 2373
BstSLI GKGCMC 1 cut(s) 1478
BstV1I GCAGC 2 cut(s) 104, 1647
BstX2I RGATCY 3 cut(s) 172, 1124, 1444
BstXI CCANNNNNNTGG 2 cut(s) 797, 1328
BstYI RGATCY 3 cut(s) 172, 1124, 1444
BstZ17I GTATAC 1 cut(s) 1409
BsuI GTATCC 1 cut(s) 2439
BsuRI GGCC 1 cut(s) 2409
BtgI CCRYGG 1 cut(s) 2529
BtrI CACGTC 1 cut(s) 2755
BtsCI GGATG 7 cut(s) 75, 588, 1318, 1914, 1992, 2633, 2748
BtsI GCAGTG 2 cut(s) 463, 1553
BtsIMutI CAGTG 6 cut(s) 463, 586, 666, 781, 1553, 2700
Cac8I GCNNGC 4 cut(s) 404, 675, 977, 1790
CciI TCATGA 1 cut(s) 186
CfoI GCGC 3 cut(s) 470, 679, 2777
Cfr13I GGNCC 1 cut(s) 1550
Csp6I GTAC 6 cut(s) 15, 2009, 2255, 2395, 2525, 2791
CspCI CAANNNNNGTGG 4 cut(s) 562, 597, 655, 690
CviQI GTAC 6 cut(s) 15, 2009, 2255, 2395, 2525, 2791
DpnI GATC 6 cut(s) 74, 174, 924, 1126, 1446, 1743
DpnII GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
DraI TTTAAA 2 cut(s) 1722, 2497
DrdI GACNNNNNNGTC 1 cut(s) 2759
DseDI GACNNNNNNGTC 1 cut(s) 2759
Ecl136II GAGCTC 1 cut(s) 192
Eco130I CCWWGG 4 cut(s) 1348, 1728, 2529, 2732
Eco24I GRGCYC 1 cut(s) 194
Eco32I GATATC 1 cut(s) 214
Eco47I GGWCC 1 cut(s) 1550
Eco53kI GAGCTC 1 cut(s) 192
Eco88I CYCGRG 2 cut(s) 1630, 1965
EcoICRI GAGCTC 1 cut(s) 192
EcoNI CCTNNNNNAGG 1 cut(s) 1851
EcoRI GAATTC 2 cut(s) 1116, 1778
EcoRII CCWGG 3 cut(s) 345, 592, 955
EcoRV GATATC 1 cut(s) 214
EcoT14I CCWWGG 4 cut(s) 1348, 1728, 2529, 2732
EcoT38I GRGCYC 1 cut(s) 194
ErhI CCWWGG 4 cut(s) 1348, 1728, 2529, 2732
FalI AAGNNNNNCTT 2 cut(s) 2669, 2701
FaqI GGGAC 2 cut(s) 961, 1250
FauI CCCGC 1 cut(s) 431
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1408
Fnu4HI GCNGC 2 cut(s) 93, 1636
FokI GGATG 7 cut(s) 82, 575, 1325, 1901, 1979, 2620, 2755
FriOI GRGCYC 1 cut(s) 194
Fsp4HI GCNGC 2 cut(s) 93, 1636
FspI TGCGCA 2 cut(s) 469, 678
GlaI GCGC 3 cut(s) 469, 678, 2776
GluI GCNGC 2 cut(s) 93, 1636
GsuI CTGGAG 2 cut(s) 189, 2373
HaeIII GGCC 1 cut(s) 2409
HapII CCGG 2 cut(s) 83, 1121
HhaI GCGC 3 cut(s) 470, 679, 2777
Hin6I GCGC 3 cut(s) 468, 677, 2775
HinP1I GCGC 3 cut(s) 468, 677, 2775
HincII GTYRAC 4 cut(s) 787, 1318, 2563, 2605
HindII GTYRAC 4 cut(s) 787, 1318, 2563, 2605
HindIII AAGCTT 6 cut(s) 26, 400, 973, 982, 1499, 1790
HpaI GTTAAC 1 cut(s) 1318
HpaII CCGG 2 cut(s) 83, 1121
HphI GGTGA 9 cut(s) 233, 380, 971, 1046, 1583, 1634, 2609, 2671, 2721
Hpy166II GTNNAC 9 cut(s) 787, 1318, 1409, 1553, 2009, 2434, 2466, 2563, 2605
Hpy188I TCNGA 8 cut(s) 130, 558, 712, 872, 1534, 2326, 2765, 2783
Hpy8I GTNNAC 9 cut(s) 787, 1318, 1409, 1553, 2009, 2434, 2466, 2563, 2605
HpyAV CCTTC 4 cut(s) 318, 998, 1021, 1847
HpyCH4III ACNGT 3 cut(s) 245, 1305, 2230
HpyCH4IV ACGT 8 cut(s) 13, 266, 766, 2092, 2253, 2556, 2641, 2754
HpyF10VI GCNNNNNNNGC 7 cut(s) 696, 802, 981, 1005, 1498, 1641, 2406
HpySE526I ACGT 8 cut(s) 13, 266, 766, 2092, 2253, 2556, 2641, 2754
HspAI GCGC 3 cut(s) 468, 677, 2775
Kpn2I TCCGGA 1 cut(s) 82
Ksp22I TGATCA 1 cut(s) 72
KspAI GTTAAC 1 cut(s) 1318
Kzo9I GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
LmnI GCTCC 6 cut(s) 4, 302, 1078, 1591, 1660, 2737
Lsp1109I GCAGC 2 cut(s) 104, 1647
LweI GCATC 5 cut(s) 896, 1591, 1923, 2688, 2733
MaeII ACGT 8 cut(s) 13, 266, 766, 2092, 2253, 2556, 2641, 2754
MaeIII GTNAC 6 cut(s) 239, 569, 1034, 1352, 2642, 2727
MalI GATC 6 cut(s) 74, 174, 924, 1126, 1446, 1743
MbiI CCGCTC 1 cut(s) 2740
MboI GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
MboII GAAGA 4 cut(s) 606, 750, 1335, 2279
MfeI CAATTG 1 cut(s) 914
MflI RGATCY 3 cut(s) 172, 1124, 1444
MhlI GDGCHC 4 cut(s) 194, 1478, 1665, 1801
MlyI GAGTC 5 cut(s) 267, 333, 1394, 2703, 2780
MmeI TCCRAC 3 cut(s) 473, 550, 578
MroI TCCGGA 1 cut(s) 82
MroXI GAANNNNTTC 2 cut(s) 610, 866
MspA1I CMGCKG 1 cut(s) 438
MspI CCGG 2 cut(s) 83, 1121
MspR9I CCNGG 4 cut(s) 347, 594, 957, 1122
MunI CAATTG 1 cut(s) 914
Mva1269I GAATGC 3 cut(s) 7, 486, 2687
MvaI CCWGG 3 cut(s) 347, 594, 957
MwoI GCNNNNNNNGC 7 cut(s) 696, 802, 981, 1005, 1498, 1641, 2406
NciI CCSGG 1 cut(s) 1122
NcoI CCATGG 1 cut(s) 2529
NdeII GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
NlaIV GGNNCC 6 cut(s) 298, 586, 735, 1126, 1477, 2309
NmeAIII GCCGAG 2 cut(s) 798, 1620
NmuCI GTSAC 3 cut(s) 239, 1034, 2727
NsbI TGCGCA 2 cut(s) 469, 678
NspI RCATGY 3 cut(s) 81, 361, 2494
PaeR7I CTCGAG 1 cut(s) 1965
PagI TCATGA 1 cut(s) 186
PciI ACATGT 3 cut(s) 77, 357, 2490
PctI GAATGC 3 cut(s) 7, 486, 2687
PdmI GAANNNNTTC 2 cut(s) 610, 866
PfeI GAWTC 7 cut(s) 86, 125, 199, 744, 1894, 2016, 2141
PflFI GACNNNGTC 1 cut(s) 2546
PflMI CCANNNNNTGG 2 cut(s) 1421, 2551
PfoI TCCNGGA 1 cut(s) 1120
PkrI GCNGC 2 cut(s) 94, 1637
PleI GAGTC 5 cut(s) 266, 333, 1393, 2703, 2780
PpsI GAGTC 5 cut(s) 266, 333, 1393, 2703, 2780
Ppu21I YACGTR 1 cut(s) 14
PscI ACATGT 3 cut(s) 77, 357, 2490
PsiI TTATAA 3 cut(s) 1217, 2100, 2202
Psp124BI GAGCTC 1 cut(s) 194
Psp6I CCWGG 3 cut(s) 345, 592, 955
PspGI CCWGG 3 cut(s) 345, 592, 955
PspN4I GGNNCC 6 cut(s) 298, 586, 735, 1126, 1477, 2309
PspPI GGNCC 1 cut(s) 1550
PstI CTGCAG 2 cut(s) 94, 221
PsuI RGATCY 3 cut(s) 172, 1124, 1444
PsyI GACNNNGTC 1 cut(s) 2546
RsaI GTAC 6 cut(s) 16, 2010, 2256, 2396, 2526, 2792
RsaNI GTAC 6 cut(s) 15, 2009, 2255, 2395, 2525, 2791
SacI GAGCTC 1 cut(s) 194
SatI GCNGC 2 cut(s) 93, 1636
Sau3AI GATC 6 cut(s) 72, 172, 922, 1124, 1444, 1741
Sau96I GGNCC 1 cut(s) 1550
SchI GAGTC 5 cut(s) 267, 333, 1394, 2703, 2780
ScrFI CCNGG 4 cut(s) 347, 594, 957, 1122
SduI GDGCHC 4 cut(s) 194, 1478, 1665, 1801
SfaNI GCATC 5 cut(s) 896, 1591, 1923, 2688, 2733
SfcI CTRYAG 3 cut(s) 90, 217, 2373
Sfr274I CTCGAG 1 cut(s) 1965
SinI GGWCC 1 cut(s) 1550
SlaI CTCGAG 1 cut(s) 1965
SmlI CTYRAG 4 cut(s) 378, 1802, 1965, 2363
SmoI CTYRAG 4 cut(s) 378, 1802, 1965, 2363
SpeI ACTAGT 1 cut(s) 1070
SsiI CCGC 4 cut(s) 133, 438, 1257, 2740
SspI AATATT 2 cut(s) 754, 880
SstI GAGCTC 1 cut(s) 194
StyD4I CCNGG 4 cut(s) 345, 592, 955, 1120
StyI CCWWGG 4 cut(s) 1348, 1728, 2529, 2732
TaaI ACNGT 3 cut(s) 245, 1305, 2230
TaiI ACGT 8 cut(s) 16, 269, 769, 2095, 2256, 2559, 2644, 2757
TaqI TCGA 4 cut(s) 1142, 1966, 2580, 2586
TatI WGTACW 1 cut(s) 2008
TfiI GAWTC 7 cut(s) 86, 125, 199, 744, 1894, 2016, 2141
TscAI CASTG 6 cut(s) 470, 586, 673, 781, 1560, 2700
TseFI GTSAC 3 cut(s) 239, 1034, 2727
TseI GCWGC 2 cut(s) 92, 1635
Tsp45I GTSAC 3 cut(s) 239, 1034, 2727
TspRI CASTG 6 cut(s) 470, 586, 673, 781, 1560, 2700
Tth111I GACNNNGTC 1 cut(s) 2546
Van91I CCANNNNNTGG 2 cut(s) 1421, 2551
VpaK11BI GGWCC 1 cut(s) 1550
XagI CCTNNNNNAGG 1 cut(s) 1851
XapI RAATTY 8 cut(s) 41, 372, 444, 866, 1042, 1116, 1770, 1778
XbaI TCTAGA 2 cut(s) 740, 905
XceI RCATGY 3 cut(s) 81, 361, 2494
XhoI CTCGAG 1 cut(s) 1965
XmiI GTMKAC 1 cut(s) 1408
XmnI GAANNNNTTC 2 cut(s) 610, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.