LRR receptor-like serine threonine-protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 38 - 77 | 6.2e-13 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 104 - 233 | 4.8e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 371 - 455 | 1.7e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 380 - 482 | 5.7e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 466 - 601 | 2.6e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 548 - 607 | 1.6e-10 | Leucine rich repeat |
| Pkinase | PF00069 | 716 - 879 | 2.2e-29 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 717 - 877 | 8.7e-29 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1812 |
| AarI | CACCTGC | 1 cut(s) | 789 |
| Acc36I | ACCTGC | 2 cut(s) | 789, 1930 |
| AccB1I | GGYRCC | 1 cut(s) | 2304 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 806, 1409 |
| AccI | GTMKAC | 3 cut(s) | 382, 1396, 2187 |
| AciI | CCGC | 6 cut(s) | 95, 424, 1400, 1487, 1968, 2308 |
| AclWI | GGATC | 3 cut(s) | 155, 2061, 2636 |
| AcoI | YGGCCR | 1 cut(s) | 411 |
| AcsI | RAATTY | 9 cut(s) | 347, 360, 854, 1030, 1162, 1310, 1673, 1766, 1998 |
| AcuI | CTGAAG | 2 cut(s) | 1259, 1278 |
| AcyI | GRCGYC | 1 cut(s) | 846 |
| AfaI | GTAC | 6 cut(s) | 693, 718, 1057, 1170, 1962, 2083 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 302, 426, 806, 969, 1409, 1660, 1822, 1841 |
| AflII | CTTAAG | 2 cut(s) | 1790, 2318 |
| AjnI | CCWGG | 3 cut(s) | 123, 261, 1044 |
| Alw21I | GWGCWC | 3 cut(s) | 74, 182, 474 |
| Alw26I | GTCTC | 3 cut(s) | 1224, 2055, 2113 |
| AlwI | GGATC | 3 cut(s) | 155, 2061, 2636 |
| Ama87I | CYCGRG | 1 cut(s) | 1820 |
| AoxI | GGCC | 4 cut(s) | 376, 411, 500, 1319 |
| ApeKI | GCWGC | 3 cut(s) | 1416, 2025, 2416 |
| ApoI | RAATTY | 9 cut(s) | 347, 360, 854, 1030, 1162, 1310, 1673, 1766, 1998 |
| AseI | ATTAAT | 1 cut(s) | 2006 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 598, 1126, 1653, 1914, 2124, 2267 |
| AspLEI | GCGC | 1 cut(s) | 390 |
| AspS9I | GGNCC | 3 cut(s) | 376, 500, 1319 |
| AsuHPI | GGTGA | 7 cut(s) | 3, 494, 1034, 1622, 1838, 2219, 2612 |
| AsuII | TTCGAA | 1 cut(s) | 958 |
| AvaI | CYCGRG | 1 cut(s) | 1820 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1851, 1884 |
| BalI | TGGCCA | 1 cut(s) | 413 |
| BanI | GGYRCC | 1 cut(s) | 2304 |
| BanII | GRGCYC | 1 cut(s) | 182 |
| BarI | GAAGNNNNNNTAC | 8 cut(s) | 273, 305, 709, 741, 1333, 1365, 2226, 2258 |
| BbsI | GAAGAC | 1 cut(s) | 1244 |
| Bbv12I | GWGCWC | 3 cut(s) | 74, 182, 474 |
| BbvI | GCAGC | 3 cut(s) | 1403, 2012, 2403 |
| BccI | CCATC | 7 cut(s) | 203, 403, 1336, 1785, 1824, 2492, 2539 |
| BceAI | ACGGC | 1 cut(s) | 363 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 818, 852, 1168, 1202 |
| BciT130I | CCWGG | 3 cut(s) | 125, 263, 1046 |
| BcoDI | GTCTC | 3 cut(s) | 1224, 2055, 2113 |
| BfmI | CTRYAG | 1 cut(s) | 205 |
| BfrI | CTTAAG | 2 cut(s) | 1790, 2318 |
| BfuAI | ACCTGC | 2 cut(s) | 789, 1930 |
| BisI | GCNGC | 4 cut(s) | 1417, 1968, 2026, 2417 |
| BlsI | GCNGC | 4 cut(s) | 1418, 1969, 2027, 2418 |
| BmcAI | AGTACT | 1 cut(s) | 1962 |
| Bme1390I | CCNGG | 3 cut(s) | 125, 263, 1046 |
| BmeT110I | CYCGRG | 1 cut(s) | 1820 |
| BmgT120I | GGNCC | 3 cut(s) | 376, 500, 1319 |
| BmiI | GGNNCC | 3 cut(s) | 1761, 2306, 2683 |
| BmrFI | CCNGG | 3 cut(s) | 125, 263, 1046 |
| BmrI | ACTGGG | 3 cut(s) | 507, 648, 1013 |
| BmsI | GCATC | 7 cut(s) | 159, 1188, 1911, 2084, 2267, 2428, 2642 |
| BmuI | ACTGGG | 3 cut(s) | 507, 648, 1013 |
| BpiI | GAAGAC | 1 cut(s) | 1244 |
| BpmI | CTGGAG | 1 cut(s) | 284 |
| Bpu14I | TTCGAA | 1 cut(s) | 958 |
| BpuEI | CTTGAG | 6 cut(s) | 255, 351, 1085, 2323, 2427, 2685 |
| Bsa29I | ATCGAT | 1 cut(s) | 2487 |
| BsaAI | YACGTR | 1 cut(s) | 2081 |
| BsaBI | GATNNNNATC | 1 cut(s) | 705 |
| BsaHI | GRCGYC | 1 cut(s) | 846 |
| BsaJI | CCNNGG | 4 cut(s) | 640, 963, 1335, 1627 |
| BsaWI | WCCGGW | 1 cut(s) | 932 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 302, 426, 806, 969, 1409, 1660, 1822, 1841 |
| Bse1I | ACTGG | 7 cut(s) | 282, 502, 654, 1008, 1446, 1540, 1867 |
| Bse3DI | GCAATG | 2 cut(s) | 2028, 2569 |
| Bse8I | GATNNNNATC | 1 cut(s) | 705 |
| BseBI | CCWGG | 3 cut(s) | 125, 263, 1046 |
| BseCI | ATCGAT | 1 cut(s) | 2487 |
| BseDI | CCNNGG | 4 cut(s) | 640, 963, 1335, 1627 |
| BseGI | GGATG | 9 cut(s) | 195, 1179, 1328, 1493, 1902, 2419, 2463, 2531, 2644 |
| BseJI | GATNNNNATC | 1 cut(s) | 705 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 302, 426, 806, 969, 1409, 1660, 1822, 1841 |
| BseMI | GCAATG | 2 cut(s) | 2028, 2569 |
| BseMII | CTCAG | 4 cut(s) | 532, 939, 1130, 2215 |
| BseNI | ACTGG | 7 cut(s) | 282, 502, 654, 1008, 1446, 1540, 1867 |
| BseRI | GAGGAG | 1 cut(s) | 1113 |
| BseXI | GCAGC | 3 cut(s) | 1403, 2012, 2403 |
| BseYI | CCCAGC | 3 cut(s) | 580, 1219, 2558 |
| BshFI | GGCC | 4 cut(s) | 378, 413, 502, 1321 |
| BshNI | GGYRCC | 1 cut(s) | 2304 |
| BshVI | ATCGAT | 1 cut(s) | 2487 |
| BsiHKAI | GWGCWC | 3 cut(s) | 74, 182, 474 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1820 |
| BsiSI | CCGG | 2 cut(s) | 901, 933 |
| BslFI | GGGAC | 3 cut(s) | 563, 1236, 1302 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 302, 426, 806, 969, 1409, 1660, 1822, 1841 |
| BsmAI | GTCTC | 3 cut(s) | 1224, 2055, 2113 |
| BsmFI | GGGAC | 3 cut(s) | 563, 1236, 1302 |
| BsmI | GAATGC | 1 cut(s) | 2285 |
| BsnI | GGCC | 4 cut(s) | 378, 413, 502, 1321 |
| BsoBI | CYCGRG | 1 cut(s) | 1820 |
| Bsp119I | TTCGAA | 1 cut(s) | 958 |
| Bsp1286I | GDGCHC | 3 cut(s) | 74, 182, 474 |
| Bsp143I | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| BspACI | CCGC | 6 cut(s) | 95, 424, 1400, 1487, 1968, 2308 |
| BspANI | GGCC | 4 cut(s) | 378, 413, 502, 1321 |
| BspCNI | CTCAG | 4 cut(s) | 531, 940, 1131, 2214 |
| BspDI | ATCGAT | 1 cut(s) | 2487 |
| BspHI | TCATGA | 1 cut(s) | 174 |
| BspLI | GGNNCC | 3 cut(s) | 1761, 2306, 2683 |
| BspMAI | CTGCAG | 1 cut(s) | 209 |
| BspMI | ACCTGC | 2 cut(s) | 789, 1930 |
| BspPI | GGATC | 3 cut(s) | 155, 2061, 2636 |
| BspT104I | TTCGAA | 1 cut(s) | 958 |
| BspT107I | GGYRCC | 1 cut(s) | 2304 |
| BspTI | CTTAAG | 2 cut(s) | 1790, 2318 |
| BsrDI | GCAATG | 2 cut(s) | 2028, 2569 |
| BsrI | ACTGG | 7 cut(s) | 282, 502, 654, 1008, 1446, 1540, 1867 |
| BssECI | CCNNGG | 4 cut(s) | 640, 963, 1335, 1627 |
| BssMI | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| BssNAI | GTATAC | 2 cut(s) | 1397, 2188 |
| BssNI | GRCGYC | 1 cut(s) | 846 |
| BssT1I | CCWWGG | 4 cut(s) | 640, 963, 1335, 1627 |
| Bst1107I | GTATAC | 2 cut(s) | 1397, 2188 |
| Bst2UI | CCWGG | 3 cut(s) | 125, 263, 1046 |
| Bst4CI | ACNGT | 7 cut(s) | 76, 455, 528, 721, 766, 1454, 1518 |
| Bst6I | CTCTTC | 3 cut(s) | 822, 2258, 2444 |
| BstACI | GRCGYC | 1 cut(s) | 846 |
| BstAFI | CTTAAG | 2 cut(s) | 1790, 2318 |
| BstBAI | YACGTR | 1 cut(s) | 2081 |
| BstBI | TTCGAA | 1 cut(s) | 958 |
| BstC8I | GCNNGC | 4 cut(s) | 217, 392, 2335, 2617 |
| BstDEI | CTNAG | 5 cut(s) | 464, 518, 948, 1139, 2201 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 300, 967 |
| BstF5I | GGATG | 9 cut(s) | 195, 1179, 1328, 1493, 1902, 2419, 2463, 2531, 2644 |
| BstHHI | GCGC | 1 cut(s) | 390 |
| BstKTI | GATC | 7 cut(s) | 121, 163, 478, 2069, 2325, 2551, 2644 |
| BstMAI | GTCTC | 3 cut(s) | 1224, 2055, 2113 |
| BstMBI | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 225, 1650 |
| BstNI | CCWGG | 3 cut(s) | 125, 263, 1046 |
| BstNSI | RCATGY | 2 cut(s) | 228, 1929 |
| BstSCI | CCNGG | 3 cut(s) | 123, 261, 1044 |
| BstSFI | CTRYAG | 1 cut(s) | 205 |
| BstV1I | GCAGC | 3 cut(s) | 1403, 2012, 2403 |
| BstV2I | GAAGAC | 1 cut(s) | 1244 |
| BstX2I | RGATCY | 2 cut(s) | 160, 2066 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 785, 2491 |
| BstYI | RGATCY | 2 cut(s) | 160, 2066 |
| BstZ17I | GTATAC | 2 cut(s) | 1397, 2188 |
| Bsu15I | ATCGAT | 1 cut(s) | 2487 |
| BsuRI | GGCC | 4 cut(s) | 378, 413, 502, 1321 |
| BsuTUI | ATCGAT | 1 cut(s) | 2487 |
| BtsCI | GGATG | 9 cut(s) | 195, 1179, 1328, 1493, 1902, 2419, 2463, 2531, 2644 |
| BtsIMutI | CAGTG | 7 cut(s) | 451, 524, 661, 762, 1001, 1514, 2209 |
| BveI | ACCTGC | 2 cut(s) | 789, 1930 |
| Cac8I | GCNNGC | 4 cut(s) | 217, 392, 2335, 2617 |
| CciI | TCATGA | 1 cut(s) | 174 |
| CfoI | GCGC | 1 cut(s) | 390 |
| Cfr13I | GGNCC | 3 cut(s) | 376, 500, 1319 |
| ClaI | ATCGAT | 1 cut(s) | 2487 |
| CseI | GACGC | 1 cut(s) | 835 |
| Csp6I | GTAC | 6 cut(s) | 692, 717, 1056, 1169, 1961, 2082 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 334, 369, 1225, 1260, 1609, 1644, 2504, 2539 |
| CviQI | GTAC | 6 cut(s) | 692, 717, 1056, 1169, 1961, 2082 |
| DdeI | CTNAG | 5 cut(s) | 464, 518, 948, 1139, 2201 |
| DpnI | GATC | 7 cut(s) | 120, 162, 477, 2068, 2324, 2550, 2643 |
| DpnII | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| DraI | TTTAAA | 2 cut(s) | 40, 1702 |
| EaeI | YGGCCR | 1 cut(s) | 411 |
| Eam1104I | CTCTTC | 3 cut(s) | 822, 2258, 2444 |
| EarI | CTCTTC | 3 cut(s) | 822, 2258, 2444 |
| Ecl136II | GAGCTC | 1 cut(s) | 180 |
| Eco130I | CCWWGG | 4 cut(s) | 640, 963, 1335, 1627 |
| Eco24I | GRGCYC | 1 cut(s) | 182 |
| Eco32I | GATATC | 1 cut(s) | 2724 |
| Eco53kI | GAGCTC | 1 cut(s) | 180 |
| Eco57I | CTGAAG | 2 cut(s) | 1259, 1278 |
| Eco88I | CYCGRG | 1 cut(s) | 1820 |
| EcoICRI | GAGCTC | 1 cut(s) | 180 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 300, 967 |
| EcoRI | GAATTC | 2 cut(s) | 360, 1030 |
| EcoRII | CCWGG | 3 cut(s) | 123, 261, 1044 |
| EcoRV | GATATC | 1 cut(s) | 2724 |
| EcoT14I | CCWWGG | 4 cut(s) | 640, 963, 1335, 1627 |
| EcoT22I | ATGCAT | 2 cut(s) | 68, 616 |
| EcoT38I | GRGCYC | 1 cut(s) | 182 |
| ErhI | CCWWGG | 4 cut(s) | 640, 963, 1335, 1627 |
| FaqI | GGGAC | 3 cut(s) | 563, 1236, 1302 |
| FauI | CCCGC | 1 cut(s) | 417 |
| FblI | GTMKAC | 3 cut(s) | 382, 1396, 2187 |
| Fnu4HI | GCNGC | 4 cut(s) | 1417, 1968, 2026, 2417 |
| FokI | GGATG | 9 cut(s) | 182, 1166, 1315, 1480, 1889, 2406, 2450, 2518, 2651 |
| FriOI | GRGCYC | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 4 cut(s) | 1417, 1968, 2026, 2417 |
| GlaI | GCGC | 1 cut(s) | 389 |
| GluI | GCNGC | 4 cut(s) | 1417, 1968, 2026, 2417 |
| GsaI | CCCAGC | 3 cut(s) | 584, 1223, 2562 |
| GsuI | CTGGAG | 1 cut(s) | 284 |
| HaeIII | GGCC | 4 cut(s) | 378, 413, 502, 1321 |
| HapII | CCGG | 2 cut(s) | 901, 933 |
| HgaI | GACGC | 1 cut(s) | 835 |
| HhaI | GCGC | 1 cut(s) | 390 |
| Hin1I | GRCGYC | 1 cut(s) | 846 |
| Hin6I | GCGC | 1 cut(s) | 388 |
| HinP1I | GCGC | 1 cut(s) | 388 |
| HincII | GTYRAC | 2 cut(s) | 537, 850 |
| HindII | GTYRAC | 2 cut(s) | 537, 850 |
| HindIII | AAGCTT | 2 cut(s) | 1271, 2617 |
| HpaII | CCGG | 2 cut(s) | 901, 933 |
| HphI | GGTGA | 7 cut(s) | 3, 494, 1034, 1622, 1838, 2219, 2612 |
| Hpy166II | GTNNAC | 9 cut(s) | 383, 524, 537, 850, 1171, 1207, 1397, 1541, 2188 |
| Hpy188I | TCNGA | 8 cut(s) | 107, 118, 258, 1278, 1880, 2160, 2638, 2650 |
| Hpy8I | GTNNAC | 9 cut(s) | 383, 524, 537, 850, 1171, 1207, 1397, 1541, 2188 |
| HpyAV | CCTTC | 9 cut(s) | 243, 275, 306, 735, 963, 1664, 1673, 1835, 2252 |
| HpyCH4III | ACNGT | 7 cut(s) | 76, 455, 528, 721, 766, 1454, 1518 |
| HpyCH4IV | ACGT | 3 cut(s) | 32, 2038, 2080 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 225, 1650 |
| HpyF3I | CTNAG | 5 cut(s) | 464, 518, 948, 1139, 2201 |
| HpySE526I | ACGT | 3 cut(s) | 32, 2038, 2080 |
| Hsp92I | GRCGYC | 1 cut(s) | 846 |
| HspAI | GCGC | 1 cut(s) | 388 |
| Kzo9I | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| LmnI | GCTCC | 3 cut(s) | 945, 1413, 2255 |
| Lsp1109I | GCAGC | 3 cut(s) | 1403, 2012, 2403 |
| LweI | GCATC | 7 cut(s) | 159, 1188, 1911, 2084, 2267, 2428, 2642 |
| MaeII | ACGT | 3 cut(s) | 32, 2038, 2080 |
| MaeIII | GTNAC | 6 cut(s) | 220, 766, 1022, 1340, 1448, 2600 |
| MalI | GATC | 7 cut(s) | 120, 162, 477, 2068, 2324, 2550, 2643 |
| MboI | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| MfeI | CAATTG | 1 cut(s) | 1633 |
| MflI | RGATCY | 2 cut(s) | 160, 2066 |
| MhlI | GDGCHC | 3 cut(s) | 74, 182, 474 |
| MlsI | TGGCCA | 1 cut(s) | 413 |
| MluNI | TGGCCA | 1 cut(s) | 413 |
| MlyI | GAGTC | 3 cut(s) | 532, 891, 2402 |
| MmeI | TCCRAC | 3 cut(s) | 261, 798, 2650 |
| Mox20I | TGGCCA | 1 cut(s) | 413 |
| Mph1103I | ATGCAT | 2 cut(s) | 68, 616 |
| MroXI | GAANNNNTTC | 6 cut(s) | 598, 1126, 1653, 1914, 2124, 2267 |
| MscI | TGGCCA | 1 cut(s) | 413 |
| MslI | CAYNNNNRTG | 3 cut(s) | 783, 2489, 2598 |
| Msp20I | TGGCCA | 1 cut(s) | 413 |
| MspCI | CTTAAG | 2 cut(s) | 1790, 2318 |
| MspI | CCGG | 2 cut(s) | 901, 933 |
| MspR9I | CCNGG | 3 cut(s) | 125, 263, 1046 |
| MssI | GTTTAAAC | 1 cut(s) | 40 |
| MunI | CAATTG | 1 cut(s) | 1633 |
| Mva1269I | GAATGC | 1 cut(s) | 2285 |
| MvaI | CCWGG | 3 cut(s) | 125, 263, 1046 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 225, 1650 |
| NdeII | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| NlaIV | GGNNCC | 3 cut(s) | 1761, 2306, 2683 |
| NmuCI | GTSAC | 3 cut(s) | 766, 1022, 2600 |
| NsiI | ATGCAT | 2 cut(s) | 68, 616 |
| NspI | RCATGY | 2 cut(s) | 228, 1929 |
| NspV | TTCGAA | 1 cut(s) | 958 |
| PaeR7I | CTCGAG | 1 cut(s) | 1820 |
| PagI | TCATGA | 1 cut(s) | 174 |
| PaqCI | CACCTGC | 1 cut(s) | 789 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 696 |
| PctI | GAATGC | 1 cut(s) | 2285 |
| PdmI | GAANNNNTTC | 6 cut(s) | 598, 1126, 1653, 1914, 2124, 2267 |
| PfeI | GAWTC | 8 cut(s) | 83, 113, 687, 1112, 1300, 1490, 1615, 2653 |
| PflFI | GACNNNGTC | 1 cut(s) | 1516 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 806, 1409 |
| PkrI | GCNGC | 4 cut(s) | 1418, 1969, 2027, 2418 |
| PleI | GAGTC | 3 cut(s) | 532, 891, 2402 |
| PmeI | GTTTAAAC | 1 cut(s) | 40 |
| PpsI | GAGTC | 3 cut(s) | 532, 891, 2402 |
| Ppu21I | YACGTR | 1 cut(s) | 2081 |
| PshBI | ATTAAT | 1 cut(s) | 2006 |
| PsiI | TTATAA | 1 cut(s) | 1812 |
| Psp124BI | GAGCTC | 1 cut(s) | 182 |
| Psp6I | CCWGG | 3 cut(s) | 123, 261, 1044 |
| PspFI | CCCAGC | 3 cut(s) | 580, 1219, 2558 |
| PspGI | CCWGG | 3 cut(s) | 123, 261, 1044 |
| PspN4I | GGNNCC | 3 cut(s) | 1761, 2306, 2683 |
| PspPI | GGNCC | 3 cut(s) | 376, 500, 1319 |
| PstI | CTGCAG | 1 cut(s) | 209 |
| PsuI | RGATCY | 2 cut(s) | 160, 2066 |
| PsyI | GACNNNGTC | 1 cut(s) | 1516 |
| RsaI | GTAC | 6 cut(s) | 693, 718, 1057, 1170, 1962, 2083 |
| RsaNI | GTAC | 6 cut(s) | 692, 717, 1056, 1169, 1961, 2082 |
| RseI | CAYNNNNRTG | 3 cut(s) | 783, 2489, 2598 |
| SacI | GAGCTC | 1 cut(s) | 182 |
| SatI | GCNGC | 4 cut(s) | 1417, 1968, 2026, 2417 |
| Sau3AI | GATC | 7 cut(s) | 118, 160, 475, 2066, 2322, 2548, 2641 |
| Sau96I | GGNCC | 3 cut(s) | 376, 500, 1319 |
| ScaI | AGTACT | 1 cut(s) | 1962 |
| SchI | GAGTC | 3 cut(s) | 532, 891, 2402 |
| ScrFI | CCNGG | 3 cut(s) | 125, 263, 1046 |
| SduI | GDGCHC | 3 cut(s) | 74, 182, 474 |
| SfaNI | GCATC | 7 cut(s) | 159, 1188, 1911, 2084, 2267, 2428, 2642 |
| SfcI | CTRYAG | 1 cut(s) | 205 |
| Sfr274I | CTCGAG | 1 cut(s) | 1820 |
| SfuI | TTCGAA | 1 cut(s) | 958 |
| SlaI | CTCGAG | 1 cut(s) | 1820 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 783, 2489, 2598 |
| SmlI | CTYRAG | 9 cut(s) | 270, 366, 1064, 1790, 1820, 2318, 2338, 2442, 2700 |
| SmoI | CTYRAG | 9 cut(s) | 270, 366, 1064, 1790, 1820, 2318, 2338, 2442, 2700 |
| SsiI | CCGC | 6 cut(s) | 95, 424, 1400, 1487, 1968, 2308 |
| SspI | AATATT | 3 cut(s) | 433, 742, 2479 |
| SstI | GAGCTC | 1 cut(s) | 182 |
| StyD4I | CCNGG | 3 cut(s) | 123, 261, 1044 |
| StyI | CCWWGG | 4 cut(s) | 640, 963, 1335, 1627 |
| TaaI | ACNGT | 7 cut(s) | 76, 455, 528, 721, 766, 1454, 1518 |
| TaiI | ACGT | 3 cut(s) | 35, 2041, 2083 |
| TaqI | TCGA | 9 cut(s) | 244, 474, 828, 958, 1130, 1821, 2261, 2382, 2487 |
| TatI | WGTACW | 2 cut(s) | 1055, 1960 |
| TauI | GCSGC | 1 cut(s) | 1970 |
| TfiI | GAWTC | 8 cut(s) | 83, 113, 687, 1112, 1300, 1490, 1615, 2653 |
| TscAI | CASTG | 7 cut(s) | 458, 531, 661, 769, 1008, 1521, 2209 |
| TseFI | GTSAC | 3 cut(s) | 766, 1022, 2600 |
| TseI | GCWGC | 3 cut(s) | 1416, 2025, 2416 |
| Tsp45I | GTSAC | 3 cut(s) | 766, 1022, 2600 |
| TspGWI | ACGGA | 2 cut(s) | 1188, 2059 |
| TspRI | CASTG | 7 cut(s) | 458, 531, 661, 769, 1008, 1521, 2209 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1516 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 806, 1409 |
| Vha464I | CTTAAG | 2 cut(s) | 1790, 2318 |
| VspI | ATTAAT | 1 cut(s) | 2006 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 300, 967 |
| XapI | RAATTY | 9 cut(s) | 347, 360, 854, 1030, 1162, 1310, 1673, 1766, 1998 |
| XbaI | TCTAGA | 2 cut(s) | 893, 2404 |
| XceI | RCATGY | 2 cut(s) | 228, 1929 |
| XhoI | CTCGAG | 1 cut(s) | 1820 |
| XmiI | GTMKAC | 3 cut(s) | 382, 1396, 2187 |
| XmnI | GAANNNNTTC | 6 cut(s) | 598, 1126, 1653, 1914, 2124, 2267 |
| ZrmI | AGTACT | 1 cut(s) | 1962 |
| Zsp2I | ATGCAT | 2 cut(s) | 68, 616 |