Prupe.7G044700_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
8103732 .. 8104899
1168 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G044700.1

Sequence Viewer

Length: 894 bp
ATGTTTAACAATTCTTTGATTGGTTCACTACCATATGAAGTGGGTGATTTGGTAAATCTCGCGGAGCTAGATGTATCAGGAAACAAGTTATCAGGTGATACACCCATGACCCGTAGCAAATGTACTAGTTTGCTTCCTGAATTTCTTGGCAAATTTCGAGTTCGTAAGCTTCTCAATCTTTCTCGTAATGATTTCGAGGGTGAAATGCCTAGAGAAGGGATTTTTACAAATGCAAGCGGTGTCTCCATTTTCGGAAATGTAAAGCCCCATTCATCTCAAAGACCATTTTCCCAAAGAGTAGTCATCGTTATAGCTTGTGCATTTGCATTCATAATTGCTATGTCATGTTCCATTGCTATATATTCAAAGGTGAAAATGTCACGAGGAAGTTTTGGTTCTCTTTACAAAGGAGTAATCCCTAGAGATGGAACAATAGTTTCTGTTAAGGTATTGAACCTTCAACAACAAGGATCTTTCAAGAGTTTCATTGATGAACGCAAAGCTTTAAGAAGTATAAGGCATCGTAATCTTCTAAAGATCCTAACTGCCTGCTCAGGCATCGATAATCTGGGTAATGAGTTCAGAAGTCTAGTCTTCAAGTACATGGAAAATGGAAGTCTAGACTCATGGTTGTATCCAAGAGATGAGGAGCAATGGAAAATTAAGACCTTGGGTGTTGTCCAAAGAATGAACATTGCTATTGATGTTGCTTCTGCTTTAGATTATCTCCATCACCATTGTGAAGGGGCCATTGTTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTTGATGAGGATATGGTAGCCCATGTTGGTGACTTTGGTGTAGCAAGGTTCCTTTTGGAAACATCAAATGATCCCTCCCAGAGTCAAACAATATGTCAACTGGGTTAA

Protein Analysis

298

Amino Acids

32.98

Weight (kDa)

8.43

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 62
AciI CCGC 2 cut(s) 62, 237
AclWI GGATC 3 cut(s) 478, 532, 851
AcsI RAATTY 2 cut(s) 140, 152
AfaI GTAC 2 cut(s) 124, 602
AfiI CCNNNNNNNGG 2 cut(s) 215, 425
AgsI TTSAA 5 cut(s) 366, 454, 461, 478, 598
AhlI ACTAGT 1 cut(s) 125
AleI CACNNNNGTG 1 cut(s) 738
AluBI AGCT 4 cut(s) 67, 169, 314, 503
AluI AGCT 4 cut(s) 67, 169, 314, 503
Alw26I GTCTC 1 cut(s) 247
AlwI GGATC 3 cut(s) 478, 532, 851
AoxI GGCC 1 cut(s) 747
ApoI RAATTY 2 cut(s) 140, 152
ArsI GACNNNNNNTTYG 1 cut(s) 865
AspS9I GGNCC 1 cut(s) 747
AsuHPI GGTGA 6 cut(s) 56, 107, 212, 382, 725, 827
BarI GAAGNNNNNNTAC 2 cut(s) 441, 473
BauI CACGAG 1 cut(s) 381
BbsI GAAGAC 1 cut(s) 586
BccI CCATC 2 cut(s) 419, 738
BciVI GTATCC 1 cut(s) 645
BcoDI GTCTC 1 cut(s) 247
BcuI ACTAGT 1 cut(s) 125
BfaI CTAG 6 cut(s) 68, 126, 210, 420, 590, 620
BfuI GTATCC 1 cut(s) 645
BmgT120I GGNCC 1 cut(s) 747
BmiI GGNNCC 2 cut(s) 748, 836
BmsI GCATC 2 cut(s) 529, 567
BpiI GAAGAC 1 cut(s) 586
Bpu10I CCTNAGC 1 cut(s) 553
Bsa29I ATCGAT 1 cut(s) 561
BsaJI CCNNGG 1 cut(s) 669
Bsc4I CCNNNNNNNGG 2 cut(s) 215, 425
Bse1I ACTGG 1 cut(s) 891
Bse3DI GCAATG 4 cut(s) 351, 659, 693, 784
BseCI ATCGAT 1 cut(s) 561
BseDI CCNNGG 1 cut(s) 669
BseLI CCNNNNNNNGG 2 cut(s) 215, 425
BseMI GCAATG 4 cut(s) 351, 659, 693, 784
BseMII CTCAG 1 cut(s) 567
BseNI ACTGG 1 cut(s) 891
BseRI GAGGAG 1 cut(s) 662
Bsh1236I CGCG 1 cut(s) 62
BshFI GGCC 1 cut(s) 749
BshVI ATCGAT 1 cut(s) 561
BslI CCNNNNNNNGG 2 cut(s) 215, 425
BsmAI GTCTC 1 cut(s) 247
BsmI GAATGC 1 cut(s) 326
BsnI GGCC 1 cut(s) 749
Bsp143I GATC 4 cut(s) 470, 537, 763, 856
BspACI CCGC 2 cut(s) 62, 237
BspANI GGCC 1 cut(s) 749
BspCNI CTCAG 1 cut(s) 566
BspDI ATCGAT 1 cut(s) 561
BspFNI CGCG 1 cut(s) 62
BspLI GGNNCC 2 cut(s) 748, 836
BspPI GGATC 3 cut(s) 478, 532, 851
BsrDI GCAATG 4 cut(s) 351, 659, 693, 784
BsrI ACTGG 1 cut(s) 891
BssECI CCNNGG 1 cut(s) 669
BssMI GATC 4 cut(s) 470, 537, 763, 856
BssSI CACGAG 1 cut(s) 381
BssT1I CCWWGG 1 cut(s) 669
Bst2BI CACGAG 1 cut(s) 381
BstC8I GCNNGC 2 cut(s) 235, 550
BstDEI CTNAG 1 cut(s) 553
BstENI CCTNNNNNAGG 1 cut(s) 213
BstFNI CGCG 1 cut(s) 62
BstKTI GATC 4 cut(s) 473, 540, 766, 859
BstMAI GTCTC 1 cut(s) 247
BstMBI GATC 4 cut(s) 470, 537, 763, 856
BstUI CGCG 1 cut(s) 62
BstV2I GAAGAC 1 cut(s) 586
BstX2I RGATCY 2 cut(s) 470, 537
BstYI RGATCY 2 cut(s) 470, 537
Bsu15I ATCGAT 1 cut(s) 561
BsuI GTATCC 1 cut(s) 645
BsuRI GGCC 1 cut(s) 749
BsuTUI ATCGAT 1 cut(s) 561
Cac8I GCNNGC 2 cut(s) 235, 550
Cfr13I GGNCC 1 cut(s) 747
ClaI ATCGAT 1 cut(s) 561
Csp6I GTAC 2 cut(s) 123, 601
CviAII CATG 5 cut(s) 106, 345, 604, 627, 809
CviJI RGCY 8 cut(s) 67, 169, 265, 314, 503, 749, 772, 806
CviKI_1 RGCY 8 cut(s) 67, 169, 265, 314, 503, 749, 772, 806
CviQI GTAC 2 cut(s) 123, 601
DdeI CTNAG 1 cut(s) 553
DpnI GATC 4 cut(s) 472, 539, 765, 858
DpnII GATC 4 cut(s) 470, 537, 763, 856
Eco130I CCWWGG 1 cut(s) 669
EcoNI CCTNNNNNAGG 1 cut(s) 213
EcoT14I CCWWGG 1 cut(s) 669
ErhI CCWWGG 1 cut(s) 669
FaeI CATG 5 cut(s) 109, 348, 607, 630, 812
FatI CATG 5 cut(s) 105, 344, 603, 626, 808
FauNDI CATATG 1 cut(s) 34
FspBI CTAG 6 cut(s) 68, 126, 210, 420, 590, 620
HaeIII GGCC 1 cut(s) 749
Hin1II CATG 5 cut(s) 109, 348, 607, 630, 812
HincII GTYRAC 1 cut(s) 884
HindII GTYRAC 1 cut(s) 884
HindIII AAGCTT 2 cut(s) 167, 501
HinfI GANTC 2 cut(s) 623, 868
HphI GGTGA 6 cut(s) 56, 107, 212, 382, 725, 827
Hpy166II GTNNAC 2 cut(s) 26, 884
Hpy188I TCNGA 2 cut(s) 254, 584
Hpy188III TCNNGA 6 cut(s) 78, 137, 381, 478, 620, 788
Hpy8I GTNNAC 2 cut(s) 26, 884
HpyAV CCTTC 3 cut(s) 209, 467, 737
HpyCH4V TGCA 3 cut(s) 233, 320, 326
HpyF3I CTNAG 1 cut(s) 553
Hsp92II CATG 5 cut(s) 109, 348, 607, 630, 812
Kzo9I GATC 4 cut(s) 470, 537, 763, 856
LmnI GCTCC 2 cut(s) 64, 649
LpnPI CCDG 8 cut(s) 63, 78, 150, 540, 554, 562, 872, 878
LweI GCATC 2 cut(s) 529, 567
MaeI CTAG 6 cut(s) 68, 126, 210, 420, 590, 620
MaeIII GTNAC 2 cut(s) 378, 815
MalI GATC 4 cut(s) 472, 539, 765, 858
MboI GATC 4 cut(s) 470, 537, 763, 856
MboII GAAGA 3 cut(s) 521, 586, 776
MflI RGATCY 2 cut(s) 470, 537
MluCI AATT 5 cut(s) 10, 140, 152, 333, 660
MlyI GAGTC 2 cut(s) 617, 877
MnlI CCTC 5 cut(s) 190, 377, 640, 787, 871
MseI TTAA 5 cut(s) 6, 444, 506, 663, 892
MslI CAYNNNNRTG 2 cut(s) 738, 813
Mva1269I GAATGC 1 cut(s) 326
MvnI CGCG 1 cut(s) 62
NdeI CATATG 1 cut(s) 34
NdeII GATC 4 cut(s) 470, 537, 763, 856
NlaIII CATG 5 cut(s) 109, 348, 607, 630, 812
NlaIV GGNNCC 2 cut(s) 748, 836
NmuCI GTSAC 2 cut(s) 378, 815
OliI CACNNNNGTG 1 cut(s) 738
PctI GAATGC 1 cut(s) 326
PleI GAGTC 2 cut(s) 617, 876
PpsI GAGTC 2 cut(s) 617, 876
PspN4I GGNNCC 2 cut(s) 748, 836
PspPI GGNCC 1 cut(s) 747
PsuI RGATCY 2 cut(s) 470, 537
RsaI GTAC 2 cut(s) 124, 602
RsaNI GTAC 2 cut(s) 123, 601
RseI CAYNNNNRTG 2 cut(s) 738, 813
SaqAI TTAA 5 cut(s) 6, 444, 506, 663, 892
Sau3AI GATC 4 cut(s) 470, 537, 763, 856
Sau96I GGNCC 1 cut(s) 747
SchI GAGTC 2 cut(s) 617, 877
SfaNI GCATC 2 cut(s) 529, 567
SmiMI CAYNNNNRTG 2 cut(s) 738, 813
SpeI ACTAGT 1 cut(s) 125
Sse9I AATT 5 cut(s) 10, 140, 152, 333, 660
SsiI CCGC 2 cut(s) 62, 237
SspMI CTAG 6 cut(s) 68, 126, 210, 420, 590, 620
StyI CCWWGG 1 cut(s) 669
TaqI TCGA 3 cut(s) 157, 195, 561
TasI AATT 5 cut(s) 10, 140, 152, 333, 660
TatI WGTACW 2 cut(s) 122, 600
Tru1I TTAA 5 cut(s) 6, 444, 506, 663, 892
Tru9I TTAA 5 cut(s) 6, 444, 506, 663, 892
TseFI GTSAC 2 cut(s) 378, 815
Tsp45I GTSAC 2 cut(s) 378, 815
TspDTI ATGAA 7 cut(s) 51, 261, 319, 475, 507, 704, 746
XagI CCTNNNNNAGG 1 cut(s) 213
XapI RAATTY 2 cut(s) 140, 152
XbaI TCTAGA 1 cut(s) 619
XspI CTAG 6 cut(s) 68, 126, 210, 420, 590, 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.