Rroxscaffold_6G00416560

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
38558353 .. 38561151
2799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00416560.1

Sequence Viewer

Length: 2799 bp
ATGAAGGGGCATTCACTATCAAATTGTAGGTGGTTTTTACACAAATTCCTTCCTGTGTTCATTGTTTTATGCATGAGCACAGGTCTAGAATCTGCAACACTACCAAATTTTGGAAATGAATCTGATCGTCTGGCACTGCTAGACTTCAAGAAAAGAATCACTGAAGATCCTCTCCATATCATGAGCTCATGGAATGAATCCATGCATTTCTGCAGTTGGATAGGCGTCACATGCAACAATTCCACCAGAAGAGTCGTGACTTTGAACTTGCAAGCTCAAAAGTTGGCTGGCTCCATACCACCTTCCATAGGGAATCTTACTCATCTCACTGGAATCAACTTGATAAACAACAACTTTTATGGTGAAATTCCTCAGGAAATGGGTCGTCTCTTGCGCCTGCAATATCTCAACATGTCTCAAAACTCCTTCAGTGGGAAAATTCCGACTAATATATCTCACTGTACGCAGCTGACAATGATTGATGTTTTTTCCAATAAACTCATTGGGACAATTCCTGACCAACTCAGTTCATTGTTGAAATTAACTGTGTTATGGATTGGTCGGAACAATCTCACTGGAACCATCCCACGTTGGATTGGGAACTTTTCTTCATTGTTTGCACTTTCTCTTGGTGAAAACAACTTGCAAGGAAGCATACCCGATGAGCTGGGGCGTCTAACTGCTTTGCAGAGATTCATACTTACCTCAAATAATCTTTCTGGTATGATTCCTTCTTCGATATATAACATTTCCTCCATATACTATTTCACTGTTACTCAGAATCAACTGCATGGGGAAATCCCACAAAACATTGGCATTACTCTTCCTAATCTGGAGGTATTTGCCGGAGGTGCCAACAAGTTCACAGGAACTATTCCTGTGTCCTTGTCAAATGCTTCTCAGCTATCCATTCTTGAATTTTCCCGAAATAGTTTTACTGGGAAACTCCCCGCTGAAAGTCTTGGGCGTTTGAAAAGGTTAGTTAGACTATACTTTGACTTGAACAGACTGGGAAGTGGTCAAGCTGGTGGCCTGAATTTTCTCAATTTCCTGACTAATTGTACTAGTCTTGAGGTGTTGGGTCTTAGCTATAATCGCTTTGGAGGAGAATTACCAGCATCCATAGCCAACCTTTCTACCCAGCTAAAAGTTCTTACTCTGGGGGGAAATTTGATACATGGAAGCCTCCCTACTGGTATTGGAAATCTGGTAAACTTGACACTTCTGGGAATTGAACAAAACTACATTGGTGGTCGTCTCCCTGATGTAATTGGGAAGCTTCACAAGTTAGAAGGACTGCATTTGAATCTGAACAGATTTTCAGGGCCAATCCCATTCTCCCTAGGTAACTTGACTTCAGTGACAAGGCTCTTCATGGAGGGGAATAGGTTTCAGGGAAGCATACCTCCAAGTCTTGGGAACTGCAAAAATCTATTGATACTCAACCTTTCTAGTAACAATCTAAACGGCACAATACCTAGAGAGGTAGTGGCGATTAAATCCCTTTCGATTTCTTTGACAATGTCTAACAACTCTTTGACTGGTTCACTACCATCTGAAGTGGGTGGTTTGGTAAATCTCGCAGAGCTAGACATATCAGGAAACAAATTATCGGGTGAAATCCCCGAAACCCTTGGCAGTTGTATTAGTTTGGAGAGCCTGCTTTTGAAAGGTAATGAATTCAGTGGACATATTCCTCAGTCTATGGAAAAGCTGAGAGGCTTGGAAGAGTTGGATATTTCACACAATAACTTATCTGGCCAGGTTCCTGAATTTGTAGGCAAGTTTCGAGCTCTCAAGTATCTCAATCTTTCTCACAATGATTTTGAGGGTGAATTGCCAAAAGAAGGAATCTTTTCAAATGCAACTGGTATCTCAGTGCTCGGAAATGATAAGCTCTGTGGTGGAATTCCAGAATTAGTTCTACCTGCATGTTCCAGCAGAAAGCCTCCTTCATCGAGAGGACTACTTGCCCCAAAAGTGATAATCCCTCTAACTAGTGCAATTGCATTAATATTTGCTCTTTCCTGCTTGGTTGCTGCACGTTCAATGATGAAAAAGCCAAGAGACAGACCTCTGACTTCATCTTCTCATAATGATTCATATCCAAGTATCTCTTACTCGGAACTTGTTCAGTCAACTAATGGGTTTTCTGTGGACAATTTGATTGGTTCAGGAAGCTTTGGCTCTGTATACAAAGGATTACTCAGTAGTACTGGAATGGTAGTTGCTGTTAAGGTATTAAACCTTCAACAACAAGGAGCTTCAAAGAGTTTCATTGATGAATGCAGAGCTCTAAGAAGTATAAGGCACCGCAATCTTCTGAAGATCATAACTACCTGCTCAAGCACCGATAATCAGGGTAACAACTTCAAAAGTCTAGTTTTCAATTTCATGGCAAATGGAAGTCTAGATCCTTGGCTGCACGCTAGAGAAGACGACGGATCTCAAAGTAAGAGATTGAGCCTTATCCAAAGGCTCAATATTGCCATTGATGTTGCTTGCGCATTAGATTACCTACACAACGATTGTGAAACATCCATTGTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGAGTATATGGTAGCCCATGTTGGTGACTTTGGTTTAGCAAGCTTCCTCTTCGAAGCATCAAATAATCATTCCAAAAGTCAGACCATGTCAGCTAGGCTAAAGGGTTCCATAGGCTACATTCCTCCTGGTATAATTTTTAGAATTATTAATTTTTCTTTTCCTAATACCTTATTGATCACAAAGACAACTGCCTGTATATTGCTGGAAGCGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

932

Amino Acids

101.33

Weight (kDa)

8.82

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 79 1.6e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 125 - 333 2.3e-12 Leucine-rich repeat region
LRR_8 PF13855 180 - 239 2.2e-07 Leucine rich repeat
LRR_14 PF23598 351 - 485 1.7e-09 Leucine-rich repeat region
LRR_14 PF23598 470 - 607 4.6e-08 Leucine-rich repeat region
LRR_8 PF13855 550 - 609 5.3e-08 Leucine rich repeat
Pkinase PF00069 718 - 906 3.1e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 719 - 889 7.3e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2506
Acc36I ACCTGC 2 cut(s) 1936, 2348
AccB1I GGYRCC 2 cut(s) 851, 2310
AccB7I CCANNNNNTGG 2 cut(s) 110, 1415
AccI GTMKAC 1 cut(s) 2193
AciI CCGC 2 cut(s) 951, 2314
AclWI GGATC 3 cut(s) 161, 2408, 2452
AcoI YGGCCR 1 cut(s) 1759
AcuI CTGAAG 5 cut(s) 183, 412, 1341, 1578, 2345
AcyI GRCGYC 2 cut(s) 225, 673
AfaI GTAC 3 cut(s) 463, 1063, 2215
AfiI CCNNNNNNNGG 5 cut(s) 110, 308, 432, 1415, 1847
AflIII ACRYGT 1 cut(s) 411
AhlI ACTAGT 2 cut(s) 1064, 1997
AjnI CCWGG 2 cut(s) 1761, 2707
Alw21I GWGCWC 5 cut(s) 80, 188, 1795, 1884, 2296
Alw26I GTCTC 4 cut(s) 392, 420, 1262, 2061
AlwI GGATC 3 cut(s) 161, 2408, 2452
AoxI GGCC 3 cut(s) 1030, 1325, 1759
ApeKI GCWGC 3 cut(s) 466, 2039, 2422
AseI ATTAAT 2 cut(s) 2012, 2730
Asp700I GAANNNNTTC 3 cut(s) 1855, 1920, 2130
AspA2I CCTAGG 1 cut(s) 1342
AspLEI GCGC 2 cut(s) 396, 2507
AspS9I GGNCC 1 cut(s) 1325
AsuHPI GGTGA 5 cut(s) 374, 644, 1628, 1844, 2618
AsuII TTCGAA 1 cut(s) 2634
AvrII CCTAGG 1 cut(s) 1342
AxyI CCTNAGG 1 cut(s) 372
BalI TGGCCA 1 cut(s) 1761
BanI GGYRCC 2 cut(s) 851, 2310
BanII GRGCYC 3 cut(s) 188, 1795, 2296
BarI GAAGNNNNNNTAC 8 cut(s) 715, 747, 1174, 1206, 1339, 1371, 2232, 2264
BbsI GAAGAC 1 cut(s) 2442
Bbv12I GWGCWC 5 cut(s) 80, 188, 1795, 1884, 2296
BbvI GCAGC 3 cut(s) 478, 2026, 2409
BccI CCATC 2 cut(s) 590, 1561
BceAI ACGGC 1 cut(s) 1483
BciT130I CCWGG 2 cut(s) 1763, 2709
BclI TGATCA 1 cut(s) 2757
BcoDI GTCTC 4 cut(s) 392, 420, 1262, 2061
BcuI ACTAGT 2 cut(s) 1064, 1997
BfmI CTRYAG 1 cut(s) 211
BfuAI ACCTGC 2 cut(s) 1936, 2348
BisI GCNGC 3 cut(s) 467, 2040, 2423
BlnI CCTAGG 1 cut(s) 1342
BlsI GCNGC 3 cut(s) 468, 2041, 2424
BmcAI AGTACT 1 cut(s) 2215
Bme1390I CCNGG 2 cut(s) 1763, 2709
BmgT120I GGNCC 1 cut(s) 1325
BmiI GGNNCC 6 cut(s) 292, 580, 853, 1767, 2312, 2689
BmrFI CCNGG 2 cut(s) 1763, 2709
BmrI ACTGGG 2 cut(s) 948, 1019
BmsI GCATC 2 cut(s) 1127, 2648
BmuI ACTGGG 2 cut(s) 948, 1019
BpiI GAAGAC 1 cut(s) 2442
BpmI CTGGAG 1 cut(s) 854
Bpu14I TTCGAA 1 cut(s) 2634
BpuEI CTTGAG 3 cut(s) 1091, 1781, 2329
BsaBI GATNNNNATC 1 cut(s) 2103
BsaHI GRCGYC 2 cut(s) 225, 673
BsaJI CCNNGG 3 cut(s) 1342, 1633, 2417
BsaXI ACNNNNNCTCC 2 cut(s) 737, 767
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 308, 432, 1415, 1847
Bse1I ACTGG 8 cut(s) 334, 580, 943, 1014, 1198, 1546, 1873, 2221
Bse21I CCTNAGG 1 cut(s) 372
Bse3DI GCAATG 1 cut(s) 2575
Bse8I GATNNNNATC 1 cut(s) 2103
BseBI CCWGG 2 cut(s) 1763, 2709
BseDI CCNNGG 3 cut(s) 1342, 1633, 2417
BseGI GGATG 3 cut(s) 582, 1118, 2537
BseJI GATNNNNATC 1 cut(s) 2103
BseLI CCNNNNNNNGG 5 cut(s) 110, 308, 432, 1415, 1847
BseMI GCAATG 1 cut(s) 2575
BseMII CTCAG 8 cut(s) 386, 538, 791, 914, 1706, 1712, 1890, 2221
BseNI ACTGG 8 cut(s) 334, 580, 943, 1014, 1198, 1546, 1873, 2221
BseRI GAGGAG 1 cut(s) 1119
BseXI GCAGC 3 cut(s) 478, 2026, 2409
BseYI CCCAGC 2 cut(s) 667, 1140
BsgI GTGCAG 2 cut(s) 2025, 2408
BshFI GGCC 3 cut(s) 1032, 1327, 1761
BshNI GGYRCC 2 cut(s) 851, 2310
BsiHKAI GWGCWC 5 cut(s) 80, 188, 1795, 1884, 2296
BsiSI CCGG 1 cut(s) 846
BslFI GGGAC 1 cut(s) 520
BslI CCNNNNNNNGG 5 cut(s) 110, 308, 432, 1415, 1847
BsmAI GTCTC 4 cut(s) 392, 420, 1262, 2061
BsmBI CGTCTC 2 cut(s) 392, 1262
BsmFI GGGAC 1 cut(s) 520
BsmI GAATGC 2 cut(s) 10, 2291
BsnI GGCC 3 cut(s) 1032, 1327, 1761
Bsp119I TTCGAA 1 cut(s) 2634
Bsp1286I GDGCHC 5 cut(s) 80, 188, 1795, 1884, 2296
Bsp143I GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
BspACI CCGC 2 cut(s) 951, 2314
BspANI GGCC 3 cut(s) 1032, 1327, 1761
BspCNI CTCAG 8 cut(s) 385, 537, 790, 913, 1707, 1711, 1889, 2220
BspHI TCATGA 1 cut(s) 180
BspLI GGNNCC 6 cut(s) 292, 580, 853, 1767, 2312, 2689
BspMAI CTGCAG 1 cut(s) 215
BspMI ACCTGC 2 cut(s) 1936, 2348
BspPI GGATC 3 cut(s) 161, 2408, 2452
BspQI GCTCTTC 1 cut(s) 1376
BspT104I TTCGAA 1 cut(s) 2634
BspT107I GGYRCC 2 cut(s) 851, 2310
BsrDI GCAATG 1 cut(s) 2575
BsrI ACTGG 8 cut(s) 334, 580, 943, 1014, 1198, 1546, 1873, 2221
BssECI CCNNGG 3 cut(s) 1342, 1633, 2417
BssMI GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
BssNAI GTATAC 1 cut(s) 2194
BssNI GRCGYC 2 cut(s) 225, 673
BssT1I CCWWGG 3 cut(s) 1342, 1633, 2417
Bst1107I GTATAC 1 cut(s) 2194
Bst2UI CCWGG 2 cut(s) 1763, 2709
Bst4CI ACNGT 3 cut(s) 461, 547, 772
Bst6I CTCTTC 5 cut(s) 244, 828, 1376, 1722, 2636
BstACI GRCGYC 2 cut(s) 225, 673
BstBI TTCGAA 1 cut(s) 2634
BstC8I GCNNGC 7 cut(s) 273, 289, 398, 1661, 2427, 2503, 2623
BstENI CCTNNNNNAGG 1 cut(s) 306
BstF5I GGATG 3 cut(s) 582, 1118, 2537
BstHHI GCGC 2 cut(s) 396, 2507
BstKTI GATC 7 cut(s) 127, 169, 2331, 2416, 2447, 2557, 2760
BstMAI GTCTC 4 cut(s) 392, 420, 1262, 2061
BstMBI GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
BstMWI GCNNNNNNNGC 4 cut(s) 231, 851, 1095, 1124
BstNI CCWGG 2 cut(s) 1763, 2709
BstNSI RCATGY 3 cut(s) 234, 415, 1935
BstSCI CCNGG 2 cut(s) 1761, 2707
BstSFI CTRYAG 1 cut(s) 211
BstV1I GCAGC 3 cut(s) 478, 2026, 2409
BstV2I GAAGAC 1 cut(s) 2442
BstX2I RGATCY 3 cut(s) 166, 2413, 2444
BstYI RGATCY 3 cut(s) 166, 2413, 2444
BstZ17I GTATAC 1 cut(s) 2194
Bsu36I CCTNAGG 1 cut(s) 372
BsuRI GGCC 3 cut(s) 1032, 1327, 1761
BtsCI GGATG 3 cut(s) 582, 1118, 2537
BtsI GCAGTG 1 cut(s) 134
BveI ACCTGC 2 cut(s) 1936, 2348
Cac8I GCNNGC 7 cut(s) 273, 289, 398, 1661, 2427, 2503, 2623
CciI TCATGA 1 cut(s) 180
CfoI GCGC 2 cut(s) 396, 2507
Cfr13I GGNCC 1 cut(s) 1325
CseI GACGC 2 cut(s) 214, 662
Csp6I GTAC 3 cut(s) 462, 1062, 2214
CviQI GTAC 3 cut(s) 462, 1062, 2214
DpnI GATC 7 cut(s) 126, 168, 2330, 2415, 2446, 2556, 2759
DpnII GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
EaeI YGGCCR 1 cut(s) 1759
Eam1104I CTCTTC 5 cut(s) 244, 828, 1376, 1722, 2636
EarI CTCTTC 5 cut(s) 244, 828, 1376, 1722, 2636
Ecl136II GAGCTC 3 cut(s) 186, 1793, 2294
Eco130I CCWWGG 3 cut(s) 1342, 1633, 2417
Eco24I GRGCYC 3 cut(s) 188, 1795, 2296
Eco53kI GAGCTC 3 cut(s) 186, 1793, 2294
Eco57I CTGAAG 5 cut(s) 183, 412, 1341, 1578, 2345
Eco81I CCTNAGG 1 cut(s) 372
EcoICRI GAGCTC 3 cut(s) 186, 1793, 2294
EcoNI CCTNNNNNAGG 1 cut(s) 306
EcoRI GAATTC 2 cut(s) 1679, 1908
EcoRII CCWGG 2 cut(s) 1761, 2707
EcoT14I CCWWGG 3 cut(s) 1342, 1633, 2417
EcoT22I ATGCAT 2 cut(s) 74, 207
EcoT38I GRGCYC 3 cut(s) 188, 1795, 2296
ErhI CCWWGG 3 cut(s) 1342, 1633, 2417
Esp3I CGTCTC 2 cut(s) 392, 1262
FalI AAGNNNNNCTT 2 cut(s) 2101, 2133
FaqI GGGAC 1 cut(s) 520
FauI CCCGC 1 cut(s) 958
FbaI TGATCA 1 cut(s) 2757
FblI GTMKAC 1 cut(s) 2193
Fnu4HI GCNGC 3 cut(s) 467, 2040, 2423
FokI GGATG 3 cut(s) 569, 1105, 2524
FriOI GRGCYC 3 cut(s) 188, 1795, 2296
Fsp4HI GCNGC 3 cut(s) 467, 2040, 2423
FspI TGCGCA 1 cut(s) 2506
GlaI GCGC 2 cut(s) 395, 2506
GluI GCNGC 3 cut(s) 467, 2040, 2423
GsaI CCCAGC 2 cut(s) 671, 1144
GsuI CTGGAG 1 cut(s) 854
HaeIII GGCC 3 cut(s) 1032, 1327, 1761
HapII CCGG 1 cut(s) 846
HgaI GACGC 2 cut(s) 214, 662
HhaI GCGC 2 cut(s) 396, 2507
Hin1I GRCGYC 2 cut(s) 225, 673
Hin6I GCGC 2 cut(s) 394, 2505
HinP1I GCGC 2 cut(s) 394, 2505
HincII GTYRAC 1 cut(s) 2139
HindII GTYRAC 1 cut(s) 2139
HindIII AAGCTT 3 cut(s) 1277, 2179, 2623
HpaII CCGG 1 cut(s) 846
HphI GGTGA 5 cut(s) 374, 644, 1628, 1844, 2618
Hpy166II GTNNAC 7 cut(s) 864, 1213, 1547, 1688, 2139, 2158, 2194
Hpy8I GTNNAC 7 cut(s) 864, 1213, 1547, 1688, 2139, 2158, 2194
Hpy99I CGWCG 1 cut(s) 2444
HpyAV CCTTC 9 cut(s) 59, 312, 436, 741, 1286, 1841, 1962, 2258, 2585
HpyCH4III ACNGT 3 cut(s) 461, 547, 772
HpyCH4IV ACGT 2 cut(s) 589, 2044
HpyF10VI GCNNNNNNNGC 4 cut(s) 231, 851, 1095, 1124
HpySE526I ACGT 2 cut(s) 589, 2044
Hsp92I GRCGYC 2 cut(s) 225, 673
HspAI GCGC 2 cut(s) 394, 2505
Ksp22I TGATCA 1 cut(s) 2757
Kzo9I GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
LguI GCTCTTC 1 cut(s) 1376
LmnI GCTCC 2 cut(s) 296, 2261
Lsp1109I GCAGC 3 cut(s) 478, 2026, 2409
LweI GCATC 2 cut(s) 1127, 2648
MaeII ACGT 2 cut(s) 589, 2044
MaeIII GTNAC 8 cut(s) 226, 256, 772, 1346, 1360, 1454, 2363, 2606
MalI GATC 7 cut(s) 126, 168, 2330, 2415, 2446, 2556, 2759
MboI GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
MfeI CAATTG 1 cut(s) 2004
MflI RGATCY 3 cut(s) 166, 2413, 2444
MhlI GDGCHC 5 cut(s) 80, 188, 1795, 1884, 2296
MlsI TGGCCA 1 cut(s) 1761
MluNI TGGCCA 1 cut(s) 1761
MlyI GAGTC 1 cut(s) 261
MmeI TCCRAC 5 cut(s) 197, 467, 542, 572, 1713
Mox20I TGGCCA 1 cut(s) 1761
Mph1103I ATGCAT 2 cut(s) 74, 207
MroXI GAANNNNTTC 3 cut(s) 1855, 1920, 2130
MscI TGGCCA 1 cut(s) 1761
MseI TTAA 6 cut(s) 542, 1497, 2012, 2235, 2243, 2730
MslI CAYNNNNRTG 1 cut(s) 2604
Msp20I TGGCCA 1 cut(s) 1761
MspA1I CMGCKG 2 cut(s) 469, 953
MspI CCGG 1 cut(s) 846
MspR9I CCNGG 2 cut(s) 1763, 2709
MunI CAATTG 1 cut(s) 2004
Mva1269I GAATGC 2 cut(s) 10, 2291
MvaI CCWGG 2 cut(s) 1763, 2709
MwoI GCNNNNNNNGC 4 cut(s) 231, 851, 1095, 1124
NdeII GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
NlaIV GGNNCC 6 cut(s) 292, 580, 853, 1767, 2312, 2689
NmuCI GTSAC 4 cut(s) 226, 256, 1360, 2606
NsbI TGCGCA 1 cut(s) 2506
NsiI ATGCAT 2 cut(s) 74, 207
NspI RCATGY 3 cut(s) 234, 415, 1935
NspV TTCGAA 1 cut(s) 2634
PagI TCATGA 1 cut(s) 180
PciI ACATGT 1 cut(s) 411
PciSI GCTCTTC 1 cut(s) 1376
PctI GAATGC 2 cut(s) 10, 2291
PdmI GAANNNNTTC 3 cut(s) 1855, 1920, 2130
PflFI GACNNNGTC 2 cut(s) 1522, 2668
PflMI CCANNNNNTGG 2 cut(s) 110, 1415
PkrI GCNGC 3 cut(s) 468, 2041, 2424
PleI GAGTC 1 cut(s) 260
PpsI GAGTC 1 cut(s) 260
PscI ACATGT 1 cut(s) 411
PshBI ATTAAT 2 cut(s) 2012, 2730
Psp124BI GAGCTC 3 cut(s) 188, 1795, 2296
Psp6I CCWGG 2 cut(s) 1761, 2707
PspFI CCCAGC 2 cut(s) 667, 1140
PspGI CCWGG 2 cut(s) 1761, 2707
PspN4I GGNNCC 6 cut(s) 292, 580, 853, 1767, 2312, 2689
PspPI GGNCC 1 cut(s) 1325
PstI CTGCAG 1 cut(s) 215
PsuI RGATCY 3 cut(s) 166, 2413, 2444
PsyI GACNNNGTC 2 cut(s) 1522, 2668
PvuII CAGCTG 1 cut(s) 469
RsaI GTAC 3 cut(s) 463, 1063, 2215
RsaNI GTAC 3 cut(s) 462, 1062, 2214
RseI CAYNNNNRTG 1 cut(s) 2604
SacI GAGCTC 3 cut(s) 188, 1795, 2296
SapI GCTCTTC 1 cut(s) 1376
SaqAI TTAA 6 cut(s) 542, 1497, 2012, 2235, 2243, 2730
SatI GCNGC 3 cut(s) 467, 2040, 2423
Sau3AI GATC 7 cut(s) 124, 166, 2328, 2413, 2444, 2554, 2757
Sau96I GGNCC 1 cut(s) 1325
ScaI AGTACT 1 cut(s) 2215
SchI GAGTC 1 cut(s) 261
ScrFI CCNGG 2 cut(s) 1763, 2709
SduI GDGCHC 5 cut(s) 80, 188, 1795, 1884, 2296
SfaNI GCATC 2 cut(s) 1127, 2648
SfcI CTRYAG 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 2634
SmiMI CAYNNNNRTG 1 cut(s) 2604
SmlI CTYRAG 3 cut(s) 1070, 1796, 2344
SmoI CTYRAG 3 cut(s) 1070, 1796, 2344
SpeI ACTAGT 2 cut(s) 1064, 1997
SsiI CCGC 2 cut(s) 951, 2314
SspI AATATT 2 cut(s) 2016, 2485
SstI GAGCTC 3 cut(s) 188, 1795, 2296
StyD4I CCNGG 2 cut(s) 1761, 2707
StyI CCWWGG 3 cut(s) 1342, 1633, 2417
TaaI ACNGT 3 cut(s) 461, 547, 772
TaiI ACGT 2 cut(s) 592, 2047
TaqI TCGA 5 cut(s) 737, 1508, 1789, 1958, 2634
TatI WGTACW 2 cut(s) 1061, 2213
Tru1I TTAA 6 cut(s) 542, 1497, 2012, 2235, 2243, 2730
Tru9I TTAA 6 cut(s) 542, 1497, 2012, 2235, 2243, 2730
TseFI GTSAC 4 cut(s) 226, 256, 1360, 2606
TseI GCWGC 3 cut(s) 466, 2039, 2422
Tsp45I GTSAC 4 cut(s) 226, 256, 1360, 2606
TspGWI ACGGA 1 cut(s) 2457
Tth111I GACNNNGTC 2 cut(s) 1522, 2668
Van91I CCANNNNNTGG 2 cut(s) 110, 1415
VspI ATTAAT 2 cut(s) 2012, 2730
XagI CCTNNNNNAGG 1 cut(s) 306
XbaI TCTAGA 2 cut(s) 85, 2410
XceI RCATGY 3 cut(s) 234, 415, 1935
XmaJI CCTAGG 1 cut(s) 1342
XmiI GTMKAC 1 cut(s) 2193
XmnI GAANNNNTTC 3 cut(s) 1855, 1920, 2130
ZrmI AGTACT 1 cut(s) 2215
Zsp2I ATGCAT 2 cut(s) 74, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.