pycom16g21060

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
19219292 .. 19222644
3353 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g21060.1

Sequence Viewer

Length: 3153 bp
ATGATGGAGCATTCACGTACTATTCGTAATTTGGTTTTGTTGAAATTCCTGCATGGCTTCTTTCTCTTAGTCTTATGCATGATGAGCACATGTCCGGAATCTGCAGCATTTCCCAGCTCTACCTTGCTTGGAAACGAATCTGATCGCTTGGCTTTGCTAGACTTCAAGAAAAGAATAACTGAAGATCCCCTCAGTGTCATGAGCTCGTGGAATCATTCCATCCACTTCTGCAGTTGGGTAGGCATTACATGCCACCGTGCCACCCAAAGAGTCTTGATTCTGGACCTGCAAGATAAACAATTGGTAGGCTCCATTCCACATTCCATTGGGAATCTTACTCGTCTAATTGAAATAAGCTTGGGAATCAACAAGTTTCATGGTGAAATTCCTCAAGAATTGGGTCGACTGCGGACCTTGGGAAGTCTCAACCTGTCTTTCAATTCTTTAGGCGGGAAACTTCCGACTAATATGTCCCACTGTACACAACTCAGATTTTTGGATCTTTTATCCAATAAGATTATTGGGTCAATTCCACGCCAACTCAGTTCATGGTTGAGTTTGACTGTTCTACAACTTGGAAAAAATAATCTCAGTGGAACCATCCCAGGTTGGATAGGAAATTTTTCTTCTTTGAGGAGTCTTAGACTTGGCGCCAACAATTTTCAAGGAAGCATACCAAATGAGCTCGGGCATATAACAACCTTGGAATTATTCATAGTTGCGGACAATAATTTGTCTGGTATGCTCCCTTCTTCAATTTATAATATTTCTTCCATATACATAGTCAGTGTTGTTATGAACCATTTCCATGGAGAGCTACCACCAAATCTCGGCATCTTGCTTCCTAATCTCGTAAAATTTTACTGCGGTATAAACAATTTCACAGGAAATATTCCTGTATCATTGTCAAATGCTTCTAGACTTCAATTGATTGATTTTTCTTGTAATGACTTCACGGGGACAATCCCTGGAGAAAGTCTCGGAAGCTTGCGAAGCTTACTTGTGCTAAACCTTTTAGACAATCGACTGGGAAATGGAAAACTTGGTGATATGAGTTTTCTCCATTTCTTGACTAATTGTACTAGTCTTCAATATCTGAGTCTTAGCTTTAATCGTTTTGGGGGAGAAATCCCGAGATCCATAGCCAACCTTTCGACCCAACTACAAACTCTTTATCTATGGGGTAATTTGTTACATGGAAGCCTCCCAAACGGCATTGGAAATCTTATAAACCTTGGGACCGATCTAGTTATGACTGGTAACTATTTGGCGGGTGTTGTCCCCGAAGAAATTGGGAAGCTCAAGAAGATGCAGAGACTAGTTTTGAGTGATAACAAATTTTCCGGGCCAATTCCATCTTCCCTGGGTAATATGACTTCATTGATAGAGCTCTACGTGGACGGAAACAGTTTTGAGGGAAGTATACCTCCAAGTCTTGGAAACTGCCAAAAACTGTTAAAACTTTTACTTAATAATAACAATCTAACGGGCATCATACCTAAAAAGCTTATGGAGCTTTCAACCCTTTCAGGTCGTTTAGACCTGTCTGGAAATTATTTGACTGGTTCATTGCCAAGTGAAGTGGGTGATTTGGTGCATCTCACAGTGCTAAATATATCAAACAACAAGTTATCAGGGGAAATCCCCAGCACCATCGGCCGTTGTAACAGTTTGGGGGGCTTGTACTTGGACGACAACAAATTTGAAGGAACAATTCCTCAGTCTCTTAAAGATTTAAAGGGCTTGGAAGAACTTGACATTTCAAGCAATAACTTATCCGGGCAGATTCCTGAATTCATAGGCAAGCTTGGAGCACTTCAGTATCTCAATCTTTCGCATAATGATTTTGAAGGCGAGTTGCCCAAAGAAGGAATTTTTTCAAATGTCAACGGTGTCTCAGTTCTTGGAAATCATAGGCTCTGTGGTGGTATCCCAGAATTACATCAACCTACATGCCCCAAAAATAAACACCATTCATCTCGAGGACTACTTTCCCCAAAAGTAGTCATCCCTATATCTTGTGCACTTGCATTCATAATTGCTCTATCATGCTTCTTTGGTGCTCGTTCAATGCTGAAAAAGTCAAGAGATGGACTTGTAACTTCACGTTCTTATAAGGATTGGAAATTAGGTGTTTCCTACTCACAGCTTGTTGAATCGACTAACGGTTTCTCTGTGGATAATTTGATCGGTTCGGGAAGTTTTGGTTCTGTTTTTAAAGGGGTAATTCCTAGCGATGGAACGGTAGTTGCTGTTAAGGTATTAAACCTTCAACAACAAGGAGCGTCCAAGAGTTTCAATGATGAATGCAAAGCTTTAAGAAGTGTCAGGCACCGAAATCTTGTCAAGATCATAACTGCATGCTCAAGCATTGATAATCATGGTAGAGACTTCAAAAGTCTAGTCTTCGAGTTCATGCCAAATGGAAGTCTTGACTTGTGGTTGCATCCTAGAGATGAGGAGCAATCTCCAAGTAAGAGATTGAATTTTATGCAAAGATTGAACATAGCCATTGATGTTGCTTCTGTGTTAGATTATCTCCACAACCATTGTGAAACGTCCATTGTTCATTGTGATCTAAAGCCGAGCAATGTACTTCTTGATGAAGACATGGTAGCCCATGTTGGGGACTTTGGTTTAGCAAGGTTCCTCTTGGAAGCATCAACTGATCATTCCCTCAGTCAAACAATGTCATCGCAACTAAAGGGTTCTGTAGGTTACATTCCTCCAGAGTACGGCATGGGAGGCCAAGTTTCCATACTGGGAGATGTTTATAGCTACGGGATACTCTTGCTAGAAATGTTCACAGGAAAAACACCTACTGATGACATGTTCATTGAAGGTCTAAGCATTTACAAATTTGCAGCCATGGCTTTGCCTGACCATGTCATGGACGTTGTTGACCCTTCATTGCTCCTAGACCTCGAAGCTGATGGTAGTGTTAACGATGACAGATATGAAAGGACTGCGCTGCCCAGACGTAACAATCGTAGAGTGGTGAAAGCAAAAAAGGTAGAGGAATGCTTGTTTGCTGTGATGCAGATAGGACTGTCCTGCTGTGCAGTATCACCAAGAGAGCGTATGCTTTTGAATATGGTTGTCGGAAAAATGAGTGCAATTAGAGACTCGTACCTCAAAGTTCAAGAAGGCTAA

Protein Analysis

1051

Amino Acids

114.97

Weight (kDa)

6.98

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 46 - 84 1.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 514 - 613 3.8e-10 Leucine-rich repeat region
LRR_8 PF13855 561 - 616 1.8e-09 Leucine rich repeat
Pkinase PF00069 725 - 942 6.4e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 726 - 944 1.2e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 762, 1229, 2115
AasI GACNNNNNNGTC 1 cut(s) 469
Acc36I ACCTGC 1 cut(s) 294
AccB1I GGYRCC 2 cut(s) 650, 2331
AccB7I CCANNNNNTGG 2 cut(s) 1436, 2890
AccI GTMKAC 2 cut(s) 403, 1423
AccIII TCCGGA 1 cut(s) 94
AciI CCGC 5 cut(s) 409, 450, 722, 867, 1271
AclWI GGATC 3 cut(s) 179, 507, 1131
AcoI YGGCCR 1 cut(s) 1657
AcuI CTGAAG 2 cut(s) 201, 1802
AcyI GRCGYC 1 cut(s) 651
AfaI GTAC 7 cut(s) 19, 481, 1081, 1685, 2595, 2735, 3131
AfiI CCNNNNNNNGG 8 cut(s) 830, 1436, 1868, 2237, 2625, 2626, 2735, 2890
AflIII ACRYGT 2 cut(s) 89, 2829
AhlI ACTAGT 2 cut(s) 1082, 1318
AjnI CCWGG 3 cut(s) 604, 967, 1362
AjuI GAANNNNNNNTTGG 2 cut(s) 1342, 1374
Alw21I GWGCWC 7 cut(s) 89, 206, 687, 1392, 1816, 2026, 2065
Alw26I GTCTC 7 cut(s) 428, 983, 1309, 1728, 1900, 2382, 3117
Alw44I GTGCAC 1 cut(s) 2022
AlwI GGATC 3 cut(s) 179, 507, 1131
Ama87I CYCGRG 3 cut(s) 686, 1132, 1980
Aor13HI TCCGGA 1 cut(s) 94
AoxI GGCC 3 cut(s) 1346, 1657, 2746
ApaLI GTGCAC 1 cut(s) 2022
ApeKI GCWGC 3 cut(s) 104, 2864, 2971
ArsI GACNNNNNNTTYG 4 cut(s) 1685, 1717, 2388, 2420
Asp700I GAANNNNTTC 3 cut(s) 622, 803, 1876
AspLEI GCGC 2 cut(s) 653, 2971
AspS9I GGNCC 4 cut(s) 283, 411, 1239, 1346
AsuC2I CCSGG 2 cut(s) 1345, 1780
AsuHPI GGTGA 5 cut(s) 392, 1058, 1598, 3010, 3060
AvaI CYCGRG 3 cut(s) 686, 1132, 1980
AvaII GGWCC 3 cut(s) 283, 411, 1239
BaeGI GKGCMC 1 cut(s) 2026
BaeI ACNNNNGTAYC 2 cut(s) 1805, 1838
BanI GGYRCC 2 cut(s) 650, 2331
BanII GRGCYC 3 cut(s) 206, 687, 1392
BarI GAAGNNNNNNTAC 6 cut(s) 733, 765, 1360, 1392, 2253, 2285
BauI CACGAG 1 cut(s) 205
BbsI GAAGAC 3 cut(s) 1079, 2398, 2613
Bbv12I GWGCWC 7 cut(s) 89, 206, 687, 1392, 1816, 2026, 2065
BbvI GCAGC 3 cut(s) 116, 2876, 2958
BccI CCATC 7 cut(s) 227, 608, 1363, 1661, 2084, 2231, 2927
BceAI ACGGC 3 cut(s) 1228, 1644, 2752
BciT130I CCWGG 3 cut(s) 606, 969, 1364
BciVI GTATCC 2 cut(s) 1940, 2778
BclI TGATCA 1 cut(s) 2668
BcnI CCSGG 2 cut(s) 1345, 1780
BcoDI GTCTC 7 cut(s) 428, 983, 1309, 1728, 1900, 2382, 3117
BcuI ACTAGT 2 cut(s) 1082, 1318
BfmI CTRYAG 3 cut(s) 102, 229, 2712
BfoI RGCGCY 1 cut(s) 654
BfuAI ACCTGC 1 cut(s) 294
BfuI GTATCC 2 cut(s) 1940, 2778
BisI GCNGC 3 cut(s) 105, 2865, 2972
BlsI GCNGC 3 cut(s) 106, 2866, 2973
Bme1390I CCNGG 5 cut(s) 606, 969, 1345, 1364, 1780
Bme18I GGWCC 3 cut(s) 283, 411, 1239
BmeT110I CYCGRG 3 cut(s) 686, 1132, 1980
BmgT120I GGNCC 4 cut(s) 283, 411, 1239, 1346
BmiI GGNNCC 6 cut(s) 310, 598, 652, 1240, 2333, 2648
BmrFI CCNGG 5 cut(s) 606, 969, 1345, 1364, 1780
BmrI ACTGGG 2 cut(s) 1037, 2771
BmsI GCATC 7 cut(s) 843, 1299, 1500, 1606, 2455, 2669, 3027
BmuI ACTGGG 2 cut(s) 1037, 2771
BpiI GAAGAC 3 cut(s) 1079, 2398, 2613
BplI GAGNNNNNCTC 2 cut(s) 963, 995
BpmI CTGGAG 2 cut(s) 990, 2712
BpuEI CTTGAG 3 cut(s) 375, 1286, 2350
BpuMI CCSGG 2 cut(s) 1345, 1780
BsaAI YACGTR 2 cut(s) 17, 1396
BsaHI GRCGYC 1 cut(s) 651
BsaJI CCNNGG 9 cut(s) 414, 604, 702, 808, 967, 1234, 1362, 1363, 2868
BsaWI WCCGGW 1 cut(s) 94
BsaXI ACNNNNNCTCC 2 cut(s) 2736, 2766
Bsc4I CCNNNNNNNGG 8 cut(s) 830, 1436, 1868, 2237, 2625, 2626, 2735, 2890
Bse1I ACTGG 4 cut(s) 1032, 1261, 1567, 2766
Bse3DI GCAATG 3 cut(s) 1568, 2596, 2909
BseAI TCCGGA 1 cut(s) 94
BseBI CCWGG 3 cut(s) 606, 969, 1364
BseDI CCNNGG 9 cut(s) 414, 604, 702, 808, 967, 1234, 1362, 1363, 2868
BseGI GGATG 4 cut(s) 219, 600, 2007, 2446
BseLI CCNNNNNNNGG 8 cut(s) 830, 1436, 1868, 2237, 2625, 2626, 2735, 2890
BseMI GCAATG 3 cut(s) 1568, 2596, 2909
BseMII CTCAG 8 cut(s) 205, 502, 556, 604, 1088, 1733, 1911, 2692
BseNI ACTGG 4 cut(s) 1032, 1261, 1567, 2766
BseRI GAGGAG 2 cut(s) 649, 2474
BseSI GKGCMC 1 cut(s) 2026
BseX3I CGGCCG 1 cut(s) 1657
BseXI GCAGC 3 cut(s) 116, 2876, 2958
BseYI CCCAGC 2 cut(s) 113, 1646
BsgI GTGCAG 1 cut(s) 3081
Bsh1285I CGRYCG 1 cut(s) 1660
BshFI GGCC 3 cut(s) 1348, 1659, 2748
BshNI GGYRCC 2 cut(s) 650, 2331
BsiEI CGRYCG 1 cut(s) 1660
BsiHKAI GWGCWC 7 cut(s) 89, 206, 687, 1392, 1816, 2026, 2065
BsiHKCI CYCGRG 3 cut(s) 686, 1132, 1980
BsiSI CCGG 3 cut(s) 95, 1344, 1779
BslFI GGGAC 5 cut(s) 457, 973, 1252, 1265, 2642
BslI CCNNNNNNNGG 8 cut(s) 830, 1436, 1868, 2237, 2625, 2626, 2735, 2890
BsmAI GTCTC 7 cut(s) 428, 983, 1309, 1728, 1900, 2382, 3117
BsmFI GGGAC 5 cut(s) 457, 973, 1252, 1265, 2642
BsmI GAATGC 4 cut(s) 10, 2030, 2312, 3026
BsnI GGCC 3 cut(s) 1348, 1659, 2748
BsoBI CYCGRG 3 cut(s) 686, 1132, 1980
Bsp1286I GDGCHC 7 cut(s) 89, 206, 687, 1392, 1816, 2026, 2065
Bsp13I TCCGGA 1 cut(s) 94
Bsp1407I TGTACA 1 cut(s) 479
Bsp143I GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
Bsp19I CCATGG 2 cut(s) 808, 2868
BspACI CCGC 5 cut(s) 409, 450, 722, 867, 1271
BspANI GGCC 3 cut(s) 1348, 1659, 2748
BspCNI CTCAG 8 cut(s) 204, 501, 555, 603, 1089, 1732, 1910, 2691
BspEI TCCGGA 1 cut(s) 94
BspHI TCATGA 1 cut(s) 198
BspLI GGNNCC 6 cut(s) 310, 598, 652, 1240, 2333, 2648
BspMAI CTGCAG 2 cut(s) 106, 233
BspMI ACCTGC 1 cut(s) 294
BspPI GGATC 3 cut(s) 179, 507, 1131
BspT107I GGYRCC 2 cut(s) 650, 2331
BsrDI GCAATG 3 cut(s) 1568, 2596, 2909
BsrGI TGTACA 1 cut(s) 479
BsrI ACTGG 4 cut(s) 1032, 1261, 1567, 2766
BssECI CCNNGG 9 cut(s) 414, 604, 702, 808, 967, 1234, 1362, 1363, 2868
BssMI GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
BssNAI GTATAC 1 cut(s) 1424
BssNI GRCGYC 1 cut(s) 651
BssSI CACGAG 1 cut(s) 205
BssT1I CCWWGG 5 cut(s) 414, 702, 808, 1234, 2868
Bst1107I GTATAC 1 cut(s) 1424
Bst2BI CACGAG 1 cut(s) 205
Bst2UI CCWGG 3 cut(s) 606, 969, 1364
BstACI GRCGYC 1 cut(s) 651
BstAPI GCANNNNNTGC 1 cut(s) 249
BstAUI TGTACA 1 cut(s) 479
BstBAI YACGTR 2 cut(s) 17, 1396
BstC8I GCNNGC 3 cut(s) 989, 1805, 2362
BstDSI CCRYGG 2 cut(s) 808, 2868
BstF5I GGATG 4 cut(s) 219, 600, 2007, 2446
BstH2I RGCGCY 1 cut(s) 654
BstHHI GCGC 2 cut(s) 653, 2971
BstKTI GATC 9 cut(s) 145, 187, 502, 1139, 1246, 2190, 2352, 2578, 2671
BstMAI GTCTC 7 cut(s) 428, 983, 1309, 1728, 1900, 2382, 3117
BstMBI GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
BstMCI CGRYCG 1 cut(s) 1660
BstMWI GCNNNNNNNGC 7 cut(s) 84, 249, 993, 1513, 1656, 2745, 2870
BstNI CCWGG 3 cut(s) 606, 969, 1364
BstNSI RCATGY 5 cut(s) 93, 252, 1956, 2364, 2833
BstSCI CCNGG 5 cut(s) 604, 967, 1343, 1362, 1778
BstSFI CTRYAG 3 cut(s) 102, 229, 2712
BstSLI GKGCMC 1 cut(s) 2026
BstV1I GCAGC 3 cut(s) 116, 2876, 2958
BstV2I GAAGAC 3 cut(s) 1079, 2398, 2613
BstX2I RGATCY 3 cut(s) 184, 499, 1136
BstXI CCANNNNNNTGG 1 cut(s) 809
BstYI RGATCY 3 cut(s) 184, 499, 1136
BstZ17I GTATAC 1 cut(s) 1424
BstZI CGGCCG 1 cut(s) 1657
BsuI GTATCC 2 cut(s) 1940, 2778
BsuRI GGCC 3 cut(s) 1348, 1659, 2748
BtgI CCRYGG 2 cut(s) 808, 2868
BtgZI GCGATG 2 cut(s) 2250, 2679
BtsCI GGATG 4 cut(s) 219, 600, 2007, 2446
BtsIMutI CAGTG 5 cut(s) 199, 475, 598, 793, 1611
BveI ACCTGC 1 cut(s) 294
Cac8I GCNNGC 3 cut(s) 989, 1805, 2362
CciI TCATGA 1 cut(s) 198
CfoI GCGC 2 cut(s) 653, 2971
Cfr13I GGNCC 4 cut(s) 283, 411, 1239, 1346
CseI GACGC 1 cut(s) 2274
Csp6I GTAC 7 cut(s) 18, 480, 1080, 1684, 2594, 2734, 3130
CspCI CAANNNNNGTGG 4 cut(s) 1563, 1598, 2531, 2566
CviQI GTAC 7 cut(s) 18, 480, 1080, 1684, 2594, 2734, 3130
DinI GGCGCC 1 cut(s) 652
DpnI GATC 9 cut(s) 144, 186, 501, 1138, 1245, 2189, 2351, 2577, 2670
DpnII GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
DraI TTTAAA 2 cut(s) 1737, 2218
DrdI GACNNNNNNGTC 1 cut(s) 469
DseDI GACNNNNNNGTC 1 cut(s) 469
EaeI YGGCCR 1 cut(s) 1657
EagI CGGCCG 1 cut(s) 1657
Ecl136II GAGCTC 3 cut(s) 204, 685, 1390
EclXI CGGCCG 1 cut(s) 1657
Eco130I CCWWGG 5 cut(s) 414, 702, 808, 1234, 2868
Eco24I GRGCYC 3 cut(s) 206, 687, 1392
Eco47I GGWCC 3 cut(s) 283, 411, 1239
Eco52I CGGCCG 1 cut(s) 1657
Eco53kI GAGCTC 3 cut(s) 204, 685, 1390
Eco57I CTGAAG 2 cut(s) 201, 1802
Eco88I CYCGRG 3 cut(s) 686, 1132, 1980
EcoICRI GAGCTC 3 cut(s) 204, 685, 1390
EcoRI GAATTC 1 cut(s) 1793
EcoRII CCWGG 3 cut(s) 604, 967, 1362
EcoT14I CCWWGG 5 cut(s) 414, 702, 808, 1234, 2868
EcoT22I ATGCAT 1 cut(s) 80
EcoT38I GRGCYC 3 cut(s) 206, 687, 1392
EgeI GGCGCC 1 cut(s) 652
EheI GGCGCC 1 cut(s) 652
ErhI CCWWGG 5 cut(s) 414, 702, 808, 1234, 2868
FaqI GGGAC 5 cut(s) 457, 973, 1252, 1265, 2642
FauI CCCGC 2 cut(s) 443, 1264
FbaI TGATCA 1 cut(s) 2668
FblI GTMKAC 2 cut(s) 403, 1423
Fnu4HI GCNGC 3 cut(s) 105, 2865, 2972
FokI GGATG 4 cut(s) 206, 587, 1994, 2433
FriOI GRGCYC 3 cut(s) 206, 687, 1392
Fsp4HI GCNGC 3 cut(s) 105, 2865, 2972
GlaI GCGC 2 cut(s) 652, 2970
GluI GCNGC 3 cut(s) 105, 2865, 2972
GsaI CCCAGC 2 cut(s) 117, 1650
GsuI CTGGAG 2 cut(s) 990, 2712
HaeII RGCGCY 1 cut(s) 654
HaeIII GGCC 3 cut(s) 1348, 1659, 2748
HapII CCGG 3 cut(s) 95, 1344, 1779
HgaI GACGC 1 cut(s) 2274
HhaI GCGC 2 cut(s) 653, 2971
Hin1I GRCGYC 1 cut(s) 651
Hin6I GCGC 2 cut(s) 651, 2969
HinP1I GCGC 2 cut(s) 651, 2969
HincII GTYRAC 4 cut(s) 404, 1888, 2902, 2944
HindII GTYRAC 4 cut(s) 404, 1888, 2902, 2944
HindIII AAGCTT 6 cut(s) 355, 985, 994, 1505, 1805, 2313
HpaI GTTAAC 1 cut(s) 2944
HpaII CCGG 3 cut(s) 95, 1344, 1779
HphI GGTGA 5 cut(s) 392, 1058, 1598, 3010, 3060
Hpy166II GTNNAC 9 cut(s) 404, 482, 1399, 1424, 1888, 2024, 2805, 2902, 2944
Hpy188I TCNGA 6 cut(s) 142, 462, 491, 983, 1098, 3104
Hpy8I GTNNAC 9 cut(s) 404, 482, 1399, 1424, 1888, 2024, 2805, 2902, 2944
HpyAV CCTTC 8 cut(s) 759, 1700, 1844, 1862, 2279, 2834, 2916, 3140
HpyCH4IV ACGT 6 cut(s) 16, 1395, 2107, 2558, 2895, 2980
HpyF10VI GCNNNNNNNGC 7 cut(s) 84, 249, 993, 1513, 1656, 2745, 2870
HpySE526I ACGT 6 cut(s) 16, 1395, 2107, 2558, 2895, 2980
Hsp92I GRCGYC 1 cut(s) 651
HspAI GCGC 2 cut(s) 651, 2969
KasI GGCGCC 1 cut(s) 650
Kpn2I TCCGGA 1 cut(s) 94
Ksp22I TGATCA 1 cut(s) 2668
KspAI GTTAAC 1 cut(s) 2944
Kzo9I GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
LmnI GCTCC 8 cut(s) 7, 314, 750, 1513, 1811, 2282, 2461, 2919
Lsp1109I GCAGC 3 cut(s) 116, 2876, 2958
LweI GCATC 7 cut(s) 843, 1299, 1500, 1606, 2455, 2669, 3027
MaeII ACGT 6 cut(s) 16, 1395, 2107, 2558, 2895, 2980
MaeIII GTNAC 6 cut(s) 1191, 1259, 1664, 2098, 2717, 2981
MalI GATC 9 cut(s) 144, 186, 501, 1138, 1245, 2189, 2351, 2577, 2670
MboI GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
MfeI CAATTG 2 cut(s) 299, 926
MflI RGATCY 3 cut(s) 184, 499, 1136
MhlI GDGCHC 7 cut(s) 89, 206, 687, 1392, 1816, 2026, 2065
Mly113I GGCGCC 1 cut(s) 651
MlyI GAGTC 4 cut(s) 279, 646, 1108, 3119
MmeI TCCRAC 3 cut(s) 485, 590, 3082
Mph1103I ATGCAT 1 cut(s) 80
MroI TCCGGA 1 cut(s) 94
MroXI GAANNNNTTC 3 cut(s) 622, 803, 1876
MslI CAYNNNNRTG 1 cut(s) 807
MspI CCGG 3 cut(s) 95, 1344, 1779
MspR9I CCNGG 5 cut(s) 606, 969, 1345, 1364, 1780
MunI CAATTG 2 cut(s) 299, 926
Mva1269I GAATGC 4 cut(s) 10, 2030, 2312, 3026
MvaI CCWGG 3 cut(s) 606, 969, 1364
MwoI GCNNNNNNNGC 7 cut(s) 84, 249, 993, 1513, 1656, 2745, 2870
NarI GGCGCC 1 cut(s) 651
NciI CCSGG 2 cut(s) 1345, 1780
NcoI CCATGG 2 cut(s) 808, 2868
NdeII GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
NlaIV GGNNCC 6 cut(s) 310, 598, 652, 1240, 2333, 2648
NmeAIII GCCGAG 2 cut(s) 810, 2610
NsiI ATGCAT 1 cut(s) 80
NspI RCATGY 5 cut(s) 93, 252, 1956, 2364, 2833
PaeI GCATGC 1 cut(s) 2364
PaeR7I CTCGAG 1 cut(s) 1980
PagI TCATGA 1 cut(s) 198
PasI CCCWGGG 1 cut(s) 1363
PciI ACATGT 2 cut(s) 89, 2829
PcsI WCGNNNNNNNCGW 2 cut(s) 22, 2986
PctI GAATGC 4 cut(s) 10, 2030, 2312, 3026
PdmI GAANNNNTTC 3 cut(s) 622, 803, 1876
PfeI GAWTC 8 cut(s) 98, 137, 211, 277, 331, 363, 1786, 2156
PflFI GACNNNGTC 1 cut(s) 2885
PflMI CCANNNNNTGG 2 cut(s) 1436, 2890
PkrI GCNGC 3 cut(s) 106, 2866, 2973
PleI GAGTC 4 cut(s) 278, 645, 1107, 3119
PluTI GGCGCC 1 cut(s) 654
PpsI GAGTC 4 cut(s) 278, 645, 1107, 3119
Ppu21I YACGTR 2 cut(s) 17, 1396
PscI ACATGT 2 cut(s) 89, 2829
PsiI TTATAA 3 cut(s) 762, 1229, 2115
Psp124BI GAGCTC 3 cut(s) 206, 687, 1392
Psp6I CCWGG 3 cut(s) 604, 967, 1362
PspFI CCCAGC 2 cut(s) 113, 1646
PspGI CCWGG 3 cut(s) 604, 967, 1362
PspN4I GGNNCC 6 cut(s) 310, 598, 652, 1240, 2333, 2648
PspPI GGNCC 4 cut(s) 283, 411, 1239, 1346
PstI CTGCAG 2 cut(s) 106, 233
PsuI RGATCY 3 cut(s) 184, 499, 1136
PsyI GACNNNGTC 1 cut(s) 2885
RsaI GTAC 7 cut(s) 19, 481, 1081, 1685, 2595, 2735, 3131
RsaNI GTAC 7 cut(s) 18, 480, 1080, 1684, 2594, 2734, 3130
RseI CAYNNNNRTG 1 cut(s) 807
SacI GAGCTC 3 cut(s) 206, 687, 1392
SalI GTCGAC 1 cut(s) 402
SatI GCNGC 3 cut(s) 105, 2865, 2972
Sau3AI GATC 9 cut(s) 142, 184, 499, 1136, 1243, 2187, 2349, 2575, 2668
Sau96I GGNCC 4 cut(s) 283, 411, 1239, 1346
SchI GAGTC 4 cut(s) 279, 646, 1108, 3119
ScrFI CCNGG 5 cut(s) 606, 969, 1345, 1364, 1780
SduI GDGCHC 7 cut(s) 89, 206, 687, 1392, 1816, 2026, 2065
SfaNI GCATC 7 cut(s) 843, 1299, 1500, 1606, 2455, 2669, 3027
SfcI CTRYAG 3 cut(s) 102, 229, 2712
SfoI GGCGCC 1 cut(s) 652
Sfr274I CTCGAG 1 cut(s) 1980
SinI GGWCC 3 cut(s) 283, 411, 1239
SlaI CTCGAG 1 cut(s) 1980
SmiMI CAYNNNNRTG 1 cut(s) 807
SmlI CTYRAG 4 cut(s) 390, 1301, 1980, 2365
SmoI CTYRAG 4 cut(s) 390, 1301, 1980, 2365
SpeI ACTAGT 2 cut(s) 1082, 1318
SphI GCATGC 1 cut(s) 2364
SsiI CCGC 5 cut(s) 409, 450, 722, 867, 1271
SspDI GGCGCC 1 cut(s) 650
SspI AATATT 2 cut(s) 766, 892
SstI GAGCTC 3 cut(s) 206, 687, 1392
StyD4I CCNGG 5 cut(s) 604, 967, 1343, 1362, 1778
StyI CCWWGG 5 cut(s) 414, 702, 808, 1234, 2868
TaiI ACGT 6 cut(s) 19, 1398, 2110, 2561, 2898, 2983
TaqI TCGA 7 cut(s) 403, 1024, 1154, 1981, 2159, 2409, 2925
TaqII GACCGA 1 cut(s) 1256
TatI WGTACW 4 cut(s) 479, 1079, 1683, 2593
TfiI GAWTC 8 cut(s) 98, 137, 211, 277, 331, 363, 1786, 2156
TscAI CASTG 5 cut(s) 199, 482, 598, 793, 1611
TseI GCWGC 3 cut(s) 104, 2864, 2971
TspGWI ACGGA 1 cut(s) 1416
TspRI CASTG 5 cut(s) 199, 482, 598, 793, 1611
Tth111I GACNNNGTC 1 cut(s) 2885
Van91I CCANNNNNTGG 2 cut(s) 1436, 2890
VneI GTGCAC 1 cut(s) 2022
VpaK11BI GGWCC 3 cut(s) 283, 411, 1239
XbaI TCTAGA 1 cut(s) 917
XceI RCATGY 5 cut(s) 93, 252, 1956, 2364, 2833
XhoI CTCGAG 1 cut(s) 1980
XmiI GTMKAC 2 cut(s) 403, 1423
XmnI GAANNNNTTC 3 cut(s) 622, 803, 1876
Zsp2I ATGCAT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.