pycom04g10490

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
13213222 .. 13216406
3185 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g10490.1

Sequence Viewer

Length: 3096 bp
ATGGAGCATTCACGTCGAACTCATGGCAGGCTGATTTTGTTTAAACTCTTTCATGGCTTCATTCTTTTATGCATGACCACACGTCTGGAATCTGCAGCACTGTCCAGCACTAGTCTTGGAAATGAAACTGATCGCCTGGTGCTGCTCGACTTCAAGAAACACATCACTCAAGATGCTCTCCGTGTCATGAGCTCATGGAATGATTCCGTCCATTTCTGCAGTTGGGTTGGTGTTACATGCAACCATTCCACCAAGAGAGTCTTGAATTTGAACCTGCCAGATCAAAACTTGGCAGGCTCTTTACCTCCTTCTATAGGAAATCTTTCCTATCTTACTAGTATCAACCTAGGAAGCAACAGCTTTCGTGGTGAAATTCCTCAGGAAATTGGTCGTCTGCAAAGCCTACACGTTCTCAACTTGTCTCACAATTCCTTCAGTGGGAAAATTCCAACCAATTTATCGCAGTGTACACAACTAAAGACGCTTGAGTTTCGTTACAATGAACTTATTGGCTCGATTCCAAAACAACTCAGTTCATTGTCGAAATTAAAGCATCTGGTGCTTTATAACAACAGTCTGACTGGAACCATCCCGAGTTGGATAGGAAACTTTTCTTCTCTGCGTTTGTTAGATTTTGCCGCAAACAATTTTCAAGGAAGCATACCCAATGCGCTCGGGCGGCTAACAAGATTGCAAGAATTCGCACTTGAAGGAAACAAGCTCTCTGGTATAATCCCTGCTTCAATCTATAATATTTCTTCCATATACTTGTTTGGTGTTGCTTCAAACCAATTGCATGGAGAGCTACCAACAAATCTCGGCCTTACTCTTCCTAATCTCCAAGAATTTGTCTGTGGCGACAACCAATTCACAGGAAATATTCCTGTATCATTGTCAAATGCTTCTAGACTACAACGTATTGACTTGGCTAAAAATGGTCTTACTGGCACAATCCCAGGTGAAAATCTTGGAAACTTGCGAAGCTTAGTTATACTAAACCTTAATAACAATAGATTGGGAAGTGGGAAAGCTAACGACCTGAATTTTCTCAAATTCTTGGCTAATTGTACTAGTCTGGAGTGGTTGTCTCTTTCCAGAAATCAATTTGGAGGAGAATTGCCTGTATCCATGTCCAACCTTTCAACCACACTAAGAAATCTTTACCTGGGGATAAATTTGATACATGGAAGCATCCCTTTGGGTATTGGAAATCTAGTAAACTTGGCCCTTGTTGGAATGGATAATAACTATTTCAGTGGTAGTCTCCCTGAAGAAATCGGGAGGCTTCAGAAATTAAATGAACTATATTTGGACGGCAACACTTTTTCTGGGCCAATCCCGTCATCCCTGGGTAACATGACTTCATTGACAAAACTCTTCCTAGAAGGGAATAGATTTCTGGGAAATATACCACCAAGTCTAGGAGACTGCCACCATCTTCTACTGCTTAACCTTTCCGTCAACAATCTAACAGGCACCATACCTAAAGAGATTTTTGGGCTTTCATCCCTTTCAATTTCTTTGACAATGTCTGACAATCAGTTGACAGGTCCATTGCCATCTGAAGTTGGTCTTTTGGTACATCTAGTAGAGCTAGATTTATCAAGAAACAATTTATCAGCTGAAATTCCCACAAGCCTTGGCAGTTGTATTATGTTGGTGCGTTTAAAATTGGGAGGTAATGAGCTTCAAGGAATAATTCCTCAATCTCTTAAAAGTTTAAGAAGCTTGGAAGAAATTGATCGATCAAGCAATAACTTATCTGGGCAGGTTCCTGAGTTTCTAAGCAAGTTTAGATTTCTTAGGCATCTCAATCTCTCGTATAATAAGTTTGAGGGTAAAATGCATGAAGAAGGGATCTTTTCAAATGCAACTGGTCTCTCAATTCTTGGAAATGCTAATCTATGTGGTGGTAGCTCGAAATTACATTTACCTGCATGCCCCAACATAAAGCCTCACTCATCTCGAGGACTGCTTGCTCGAAAAGTAGTCATCTCTGTAGCTTGTGCACTTGCCATCATAATTGGTATGTCATGCCTTATTGTTGCTCGTTCAATGCTTAAAAGGCCAAGGAGTATATCTGTAAGCTCACGTTCTTATAAGGATTGGAAAGCAGGTGTCTCTTACTCAGAACTTGTTCAATCAACAGACGGGTTCTCTACAGATAATTTGATTGGTTCTGGAAGTTTTGGTTCTGTTTACAAAGGAGTAGTCCCCGGTGATGGAACTCTAGTTGCAGTTAAGGTGTTAAACCTTCAACAACAAGGAGCATCCAAGAGTTTTATGGATGAATGCAAAGCTTTGAGAAGCGTAAGGCATCGTAATCTTCTGAAGATCATAACTGCATGCTCAAGCATTGACAACCAGGGTCAAGATTTCAAAAGTCTAGTTTTTGAGTACATGGTAAATGGAAGCCTAGAAATGTGGCTACATCCGAGAAATGACGAGCACACTCAGAGTAAGAGATTGAGCCTTGTCCAAAGACTCAATATTGTAATCGATGTTGCTTCTGCATTGGATTATCTGCACCACCATTGTGAAACTTCAATTGTTCATTGTGATATGAAGCCAAATAATGTTCTTCTAGACGAAGATATGGTAGCTCATGTTGGTGACTTTGGTTTAGCAAGGTTCCTCTTGGAGGCATCTAATGATCCCGCTCAAAGTCAAACCATATCAACCGGGTTAAAGGGTTCAATAGGCTACATTCCTCCAGAGTATGGCATGGGAGGCCAAGTTTCCGTCCTTGGAGATGTTTATAGTTTTGGAATACTATTGCTAGAAATGTTCACAGGAAGACGACCTACAGATGACATGTTCAAAGATGGTCTGAGCATTCACCAGTTCACTGCCATGGCGATGCCTGACCATGCCATGGACATAGTTGACCCATTGCTGCTCGTTGAATGTGACGATGCAGATGTTGATGGAAGCCCAATTCAAGCAAGAAGGTTGGTGGAATGCTCAGTTTCAGTGATGCAAATTGGACTCTCATGCTCTGCCACATCACCGCCAGAGCGAATGCTTATGGGTGCTGTTGTGAACAAATTAAAGACAATTAGAGATTCATATCTCAATTTAAGAGGTAGAGGCTAG

Protein Analysis

1032

Amino Acids

112.45

Weight (kDa)

8.01

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 81 1.9e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 189 6.9e-09 Leucine-rich repeat region
LRR_14 PF23598 148 - 338 1.5e-08 Leucine-rich repeat region
LRR_8 PF13855 182 - 241 3.1e-07 Leucine rich repeat
LRR_14 PF23598 375 - 459 2.7e-07 Leucine-rich repeat region
LRR_14 PF23598 472 - 618 2.4e-08 Leucine-rich repeat region
LRR_8 PF13855 553 - 611 2.4e-06 Leucine rich repeat
Pkinase PF00069 720 - 942 9.8e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 721 - 957 2.3e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 567, 2100
AarI CACCTGC 1 cut(s) 2105
Acc36I ACCTGC 4 cut(s) 282, 1759, 1942, 2105
AccB1I GGYRCC 1 cut(s) 1475
AccB7I CCANNNNNTGG 2 cut(s) 2720, 2875
AccBSI CCGCTC 1 cut(s) 2660
AciI CCGC 4 cut(s) 639, 679, 2658, 3011
AclWI GGATC 2 cut(s) 1865, 2648
AcsI RAATTY 9 cut(s) 265, 372, 444, 698, 845, 1042, 1052, 1174, 1626
AcuI CTGAAG 5 cut(s) 418, 1271, 1290, 1584, 2351
AfaI GTAC 4 cut(s) 469, 1069, 1581, 2399
AfiI CCNNNNNNNGG 7 cut(s) 314, 438, 1421, 2222, 2641, 2720, 2875
AflIII ACRYGT 3 cut(s) 80, 406, 2814
AhdI GACNNNNNGTC 1 cut(s) 81
AhlI ACTAGT 3 cut(s) 110, 335, 1070
AjiI CACGTC 2 cut(s) 14, 83
AjnI CCWGG 5 cut(s) 135, 955, 1164, 1347, 2364
AleI CACNNNNGTG 1 cut(s) 2535
Alw21I GWGCWC 3 cut(s) 194, 2011, 2451
Alw26I GTCTC 6 cut(s) 426, 1092, 1268, 1419, 1883, 2125
Alw44I GTGCAC 1 cut(s) 2007
AlwI GGATC 2 cut(s) 1865, 2648
Ama87I CYCGRG 3 cut(s) 592, 674, 1965
AoxI GGCC 5 cut(s) 820, 1224, 1331, 2066, 2731
ApaLI GTGCAC 1 cut(s) 2007
ApeKI GCWGC 3 cut(s) 95, 142, 2896
ApoI RAATTY 9 cut(s) 265, 372, 444, 698, 845, 1042, 1052, 1174, 1626
ArsI GACNNNNNNTTYG 2 cut(s) 2196, 2228
Asp700I GAANNNNTTC 3 cut(s) 322, 610, 2136
AspA2I CCTAGG 1 cut(s) 346
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 3 cut(s) 1225, 1331, 1550
AsuC2I CCSGG 2 cut(s) 2217, 2683
AsuHPI GGTGA 6 cut(s) 380, 971, 2231, 2624, 2831, 3000
AvaI CYCGRG 3 cut(s) 592, 674, 1965
AvaII GGWCC 1 cut(s) 1550
AvrII CCTAGG 1 cut(s) 346
AxyI CCTNAGG 1 cut(s) 378
BaeGI GKGCMC 1 cut(s) 2011
BanI GGYRCC 1 cut(s) 1475
BanII GRGCYC 1 cut(s) 194
BarI GAAGNNNNNNTAC 4 cut(s) 1345, 1377, 2788, 2820
BbsI GAAGAC 1 cut(s) 2803
Bbv12I GWGCWC 3 cut(s) 194, 2011, 2451
BbvI GCAGC 3 cut(s) 107, 129, 2883
BccI CCATC 7 cut(s) 596, 1443, 1567, 2024, 2216, 2819, 2921
BceAI ACGGC 1 cut(s) 1330
BcgI CGANNNNNNTGC 1 cut(s) 30
BciT130I CCWGG 5 cut(s) 137, 957, 1166, 1349, 2366
BciVI GTATCC 1 cut(s) 1135
BcnI CCSGG 2 cut(s) 2217, 2683
BcoDI GTCTC 6 cut(s) 426, 1092, 1268, 1419, 1883, 2125
BcuI ACTAGT 3 cut(s) 110, 335, 1070
BfmI CTRYAG 6 cut(s) 93, 217, 312, 1998, 2160, 2805
BfuAI ACCTGC 4 cut(s) 282, 1759, 1942, 2105
BfuI GTATCC 1 cut(s) 1135
BisI GCNGC 5 cut(s) 96, 143, 639, 680, 2897
BlnI CCTAGG 1 cut(s) 346
BlsI GCNGC 5 cut(s) 97, 144, 640, 681, 2898
Bme1390I CCNGG 7 cut(s) 137, 957, 1166, 1349, 2217, 2366, 2683
Bme18I GGWCC 1 cut(s) 1550
BmeRI GACNNNNNGTC 1 cut(s) 81
BmeT110I CYCGRG 3 cut(s) 592, 674, 1965
BmgBI CACGTC 2 cut(s) 14, 83
BmgT120I GGNCC 3 cut(s) 1225, 1331, 1550
BmiI GGNNCC 4 cut(s) 586, 1477, 1773, 2633
BmrFI CCNGG 7 cut(s) 137, 957, 1166, 1349, 2217, 2366, 2683
BpiI GAAGAC 1 cut(s) 2803
BpmI CTGGAG 2 cut(s) 1097, 2697
BpuEI CTTGAG 3 cut(s) 153, 506, 2335
BpuMI CCSGG 2 cut(s) 2217, 2683
Bsa29I ATCGAT 2 cut(s) 1744, 2499
BsaBI GATNNNNATC 1 cut(s) 3069
BsaI GGTCTC 1 cut(s) 1883
BsaXI ACNNNNNCTCC 4 cut(s) 1070, 1100, 2721, 2751
Bsc4I CCNNNNNNNGG 7 cut(s) 314, 438, 1421, 2222, 2641, 2720, 2875
Bse1I ACTGG 4 cut(s) 586, 949, 1879, 2842
Bse21I CCTNAGG 1 cut(s) 378
Bse3DI GCAATG 2 cut(s) 1553, 2891
Bse8I GATNNNNATC 1 cut(s) 3069
BseBI CCWGG 5 cut(s) 137, 957, 1166, 1349, 2366
BseCI ATCGAT 2 cut(s) 1744, 2499
BseGI GGATG 7 cut(s) 588, 1191, 1343, 1505, 2270, 2293, 2431
BseJI GATNNNNATC 1 cut(s) 3069
BseLI CCNNNNNNNGG 7 cut(s) 314, 438, 1421, 2222, 2641, 2720, 2875
BseMI GCAATG 2 cut(s) 1553, 2891
BseMII CTCAG 7 cut(s) 392, 544, 1767, 2142, 2468, 2822, 2979
BseNI ACTGG 4 cut(s) 586, 949, 1879, 2842
BseRI GAGGAG 1 cut(s) 1125
BseSI GKGCMC 1 cut(s) 2011
BseXI GCAGC 3 cut(s) 107, 129, 2883
BsgI GTGCAG 1 cut(s) 2510
BshFI GGCC 5 cut(s) 822, 1226, 1333, 2068, 2733
BshNI GGYRCC 1 cut(s) 1475
BshVI ATCGAT 2 cut(s) 1744, 2499
BsiHKAI GWGCWC 3 cut(s) 194, 2011, 2451
BsiHKCI CYCGRG 3 cut(s) 592, 674, 1965
BsiSI CCGG 2 cut(s) 2217, 2682
BslFI GGGAC 1 cut(s) 2198
BslI CCNNNNNNNGG 7 cut(s) 314, 438, 1421, 2222, 2641, 2720, 2875
BsmAI GTCTC 6 cut(s) 426, 1092, 1268, 1419, 1883, 2125
BsmFI GGGAC 1 cut(s) 2198
BsmI GAATGC 5 cut(s) 7, 2297, 2835, 2966, 3027
BsnI GGCC 5 cut(s) 822, 1226, 1333, 2068, 2733
Bso31I GGTCTC 1 cut(s) 1883
BsoBI CYCGRG 3 cut(s) 592, 674, 1965
Bsp1286I GDGCHC 3 cut(s) 194, 2011, 2451
Bsp1407I TGTACA 1 cut(s) 467
Bsp143I GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
Bsp19I CCATGG 2 cut(s) 2853, 2874
BspACI CCGC 4 cut(s) 639, 679, 2658, 3011
BspANI GGCC 5 cut(s) 822, 1226, 1333, 2068, 2733
BspCNI CTCAG 7 cut(s) 391, 543, 1768, 2141, 2467, 2823, 2978
BspDI ATCGAT 2 cut(s) 1744, 2499
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 4 cut(s) 586, 1477, 1773, 2633
BspMAI CTGCAG 2 cut(s) 97, 221
BspMI ACCTGC 4 cut(s) 282, 1759, 1942, 2105
BspPI GGATC 2 cut(s) 1865, 2648
BspT107I GGYRCC 1 cut(s) 1475
BspTNI GGTCTC 1 cut(s) 1883
BsrBI CCGCTC 1 cut(s) 2660
BsrDI GCAATG 2 cut(s) 1553, 2891
BsrGI TGTACA 1 cut(s) 467
BsrI ACTGG 4 cut(s) 586, 949, 1879, 2842
BssMI GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
BssT1I CCWWGG 6 cut(s) 346, 1639, 2069, 2746, 2853, 2874
Bst2UI CCWGG 5 cut(s) 137, 957, 1166, 1349, 2366
Bst4CI ACNGT 2 cut(s) 102, 575
Bst6I CTCTTC 2 cut(s) 834, 1382
BstAPI GCANNNNNTGC 1 cut(s) 559
BstAUI TGTACA 1 cut(s) 467
BstC8I GCNNGC 5 cut(s) 29, 295, 1939, 1977, 2347
BstDSI CCRYGG 2 cut(s) 2853, 2874
BstENI CCTNNNNNAGG 2 cut(s) 312, 2639
BstF5I GGATG 7 cut(s) 588, 1191, 1343, 1505, 2270, 2293, 2431
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 7 cut(s) 133, 283, 1744, 1748, 1860, 2337, 2656
BstMAI GTCTC 6 cut(s) 426, 1092, 1268, 1419, 1883, 2125
BstMBI GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
BstMWI GCNNNNNNNGC 5 cut(s) 559, 679, 802, 2065, 2730
BstNI CCWGG 5 cut(s) 137, 957, 1166, 1349, 2366
BstNSI RCATGY 4 cut(s) 240, 1941, 2349, 2818
BstSCI CCNGG 7 cut(s) 135, 955, 1164, 1347, 2215, 2364, 2681
BstSFI CTRYAG 6 cut(s) 93, 217, 312, 1998, 2160, 2805
BstSLI GKGCMC 1 cut(s) 2011
BstV1I GCAGC 3 cut(s) 107, 129, 2883
BstV2I GAAGAC 1 cut(s) 2803
BstX2I RGATCY 1 cut(s) 1857
BstXI CCANNNNNNTGG 2 cut(s) 85, 797
BstYI RGATCY 1 cut(s) 1857
Bsu15I ATCGAT 2 cut(s) 1744, 2499
Bsu36I CCTNAGG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 1135
BsuRI GGCC 5 cut(s) 822, 1226, 1333, 2068, 2733
BsuTUI ATCGAT 2 cut(s) 1744, 2499
BtgI CCRYGG 2 cut(s) 2853, 2874
BtgZI GCGATG 1 cut(s) 2873
BtrI CACGTC 2 cut(s) 14, 83
BtsCI GGATG 7 cut(s) 588, 1191, 1343, 1505, 2270, 2293, 2431
BtsI GCAGTG 2 cut(s) 470, 2847
BtsIMutI CAGTG 6 cut(s) 98, 442, 470, 1261, 2847, 2979
BveI ACCTGC 4 cut(s) 282, 1759, 1942, 2105
Cac8I GCNNGC 5 cut(s) 29, 295, 1939, 1977, 2347
CciI TCATGA 1 cut(s) 186
CfoI GCGC 1 cut(s) 673
Cfr13I GGNCC 3 cut(s) 1225, 1331, 1550
ClaI ATCGAT 2 cut(s) 1744, 2499
CseI GACGC 1 cut(s) 490
Csp6I GTAC 4 cut(s) 468, 1068, 1580, 2398
CspCI CAANNNNNGTGG 2 cut(s) 1621, 1656
CviQI GTAC 4 cut(s) 468, 1068, 1580, 2398
DpnI GATC 7 cut(s) 132, 282, 1743, 1747, 1859, 2336, 2655
DpnII GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
DraI TTTAAA 2 cut(s) 43, 1668
DriI GACNNNNNGTC 1 cut(s) 81
Eam1104I CTCTTC 2 cut(s) 834, 1382
Eam1105I GACNNNNNGTC 1 cut(s) 81
EarI CTCTTC 2 cut(s) 834, 1382
Ecl136II GAGCTC 1 cut(s) 192
Eco130I CCWWGG 6 cut(s) 346, 1639, 2069, 2746, 2853, 2874
Eco24I GRGCYC 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 1883
Eco47I GGWCC 1 cut(s) 1550
Eco53kI GAGCTC 1 cut(s) 192
Eco57I CTGAAG 5 cut(s) 418, 1271, 1290, 1584, 2351
Eco81I CCTNAGG 1 cut(s) 378
Eco88I CYCGRG 3 cut(s) 592, 674, 1965
EcoICRI GAGCTC 1 cut(s) 192
EcoNI CCTNNNNNAGG 2 cut(s) 312, 2639
EcoRI GAATTC 1 cut(s) 698
EcoRII CCWGG 5 cut(s) 135, 955, 1164, 1347, 2364
EcoT14I CCWWGG 6 cut(s) 346, 1639, 2069, 2746, 2853, 2874
EcoT22I ATGCAT 2 cut(s) 74, 1848
EcoT38I GRGCYC 1 cut(s) 194
ErhI CCWWGG 6 cut(s) 346, 1639, 2069, 2746, 2853, 2874
FalI AAGNNNNNCTT 6 cut(s) 245, 277, 1180, 1212, 1557, 1589
FaqI GGGAC 1 cut(s) 2198
FauI CCCGC 1 cut(s) 2665
Fnu4HI GCNGC 5 cut(s) 96, 143, 639, 680, 2897
FokI GGATG 7 cut(s) 575, 1178, 1330, 1492, 2257, 2300, 2418
FriOI GRGCYC 1 cut(s) 194
Fsp4HI GCNGC 5 cut(s) 96, 143, 639, 680, 2897
GlaI GCGC 1 cut(s) 672
GluI GCNGC 5 cut(s) 96, 143, 639, 680, 2897
GsuI CTGGAG 2 cut(s) 1097, 2697
HaeIII GGCC 5 cut(s) 822, 1226, 1333, 2068, 2733
HapII CCGG 2 cut(s) 2217, 2682
HgaI GACGC 1 cut(s) 490
HhaI GCGC 1 cut(s) 673
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 3 cut(s) 1462, 1545, 2887
HindII GTYRAC 3 cut(s) 1462, 1545, 2887
HindIII AAGCTT 3 cut(s) 982, 1726, 2298
HinfI GANTC 7 cut(s) 89, 203, 258, 517, 2484, 2988, 3065
HpaII CCGG 2 cut(s) 2217, 2682
HphI GGTGA 6 cut(s) 380, 971, 2231, 2624, 2831, 3000
Hpy188I TCNGA 9 cut(s) 579, 1290, 1534, 1564, 2131, 2331, 2436, 2457, 2832
Hpy99I CGWCG 1 cut(s) 18
HpyAV CCTTC 7 cut(s) 318, 442, 704, 1379, 1847, 2264, 2943
HpyCH4III ACNGT 2 cut(s) 102, 575
HpyCH4IV ACGT 5 cut(s) 13, 82, 408, 916, 2092
HpyF10VI GCNNNNNNNGC 5 cut(s) 559, 679, 802, 2065, 2730
HpySE526I ACGT 5 cut(s) 13, 82, 408, 916, 2092
HspAI GCGC 1 cut(s) 671
Kzo9I GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
LmnI GCTCC 2 cut(s) 4, 2267
Lsp1109I GCAGC 3 cut(s) 107, 129, 2883
MaeII ACGT 5 cut(s) 13, 82, 408, 916, 2092
MaeIII GTNAC 5 cut(s) 232, 494, 1352, 2612, 2909
MalI GATC 7 cut(s) 132, 282, 1743, 1747, 1859, 2336, 2655
MbiI CCGCTC 1 cut(s) 2660
MboI GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
MfeI CAATTG 2 cut(s) 791, 2547
MflI RGATCY 1 cut(s) 1857
MhlI GDGCHC 3 cut(s) 194, 2011, 2451
MlyI GAGTC 3 cut(s) 267, 2478, 2982
MmeI TCCRAC 4 cut(s) 473, 578, 1158, 1213
Mph1103I ATGCAT 2 cut(s) 74, 1848
MroXI GAANNNNTTC 3 cut(s) 322, 610, 2136
MslI CAYNNNNRTG 4 cut(s) 2535, 2610, 2852, 2858
MspA1I CMGCKG 1 cut(s) 1622
MspI CCGG 2 cut(s) 2217, 2682
MspR9I CCNGG 7 cut(s) 137, 957, 1166, 1349, 2217, 2366, 2683
MssI GTTTAAAC 1 cut(s) 43
MunI CAATTG 2 cut(s) 791, 2547
Mva1269I GAATGC 5 cut(s) 7, 2297, 2835, 2966, 3027
MvaI CCWGG 5 cut(s) 137, 957, 1166, 1349, 2366
MwoI GCNNNNNNNGC 5 cut(s) 559, 679, 802, 2065, 2730
NciI CCSGG 2 cut(s) 2217, 2683
NcoI CCATGG 2 cut(s) 2853, 2874
NdeII GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
NlaIV GGNNCC 4 cut(s) 586, 1477, 1773, 2633
NmeAIII GCCGAG 1 cut(s) 798
NmuCI GTSAC 2 cut(s) 2612, 2909
NsiI ATGCAT 2 cut(s) 74, 1848
NspI RCATGY 4 cut(s) 240, 1941, 2349, 2818
OliI CACNNNNGTG 1 cut(s) 2535
PaeI GCATGC 2 cut(s) 1941, 2349
PaeR7I CTCGAG 1 cut(s) 1965
PagI TCATGA 1 cut(s) 186
PaqCI CACCTGC 1 cut(s) 2105
PasI CCCWGGG 1 cut(s) 1348
PciI ACATGT 1 cut(s) 2814
PctI GAATGC 5 cut(s) 7, 2297, 2835, 2966, 3027
PdmI GAANNNNTTC 3 cut(s) 322, 610, 2136
PfeI GAWTC 4 cut(s) 89, 203, 517, 3065
PflFI GACNNNGTC 1 cut(s) 1528
PflMI CCANNNNNTGG 2 cut(s) 2720, 2875
PkrI GCNGC 5 cut(s) 97, 144, 640, 681, 2898
PleI GAGTC 3 cut(s) 266, 2478, 2982
PmeI GTTTAAAC 1 cut(s) 43
PpsI GAGTC 3 cut(s) 266, 2478, 2982
PscI ACATGT 1 cut(s) 2814
PsiI TTATAA 2 cut(s) 567, 2100
Psp124BI GAGCTC 1 cut(s) 194
Psp6I CCWGG 5 cut(s) 135, 955, 1164, 1347, 2364
PspGI CCWGG 5 cut(s) 135, 955, 1164, 1347, 2364
PspN4I GGNNCC 4 cut(s) 586, 1477, 1773, 2633
PspPI GGNCC 3 cut(s) 1225, 1331, 1550
PstI CTGCAG 2 cut(s) 97, 221
PsuI RGATCY 1 cut(s) 1857
PsyI GACNNNGTC 1 cut(s) 1528
PvuII CAGCTG 1 cut(s) 1622
RsaI GTAC 4 cut(s) 469, 1069, 1581, 2399
RsaNI GTAC 4 cut(s) 468, 1068, 1580, 2398
RseI CAYNNNNRTG 4 cut(s) 2535, 2610, 2852, 2858
SacI GAGCTC 1 cut(s) 194
SatI GCNGC 5 cut(s) 96, 143, 639, 680, 2897
Sau3AI GATC 7 cut(s) 130, 280, 1741, 1745, 1857, 2334, 2653
Sau96I GGNCC 3 cut(s) 1225, 1331, 1550
SchI GAGTC 3 cut(s) 267, 2478, 2982
ScrFI CCNGG 7 cut(s) 137, 957, 1166, 1349, 2217, 2366, 2683
SduI GDGCHC 3 cut(s) 194, 2011, 2451
SfcI CTRYAG 6 cut(s) 93, 217, 312, 1998, 2160, 2805
Sfr274I CTCGAG 1 cut(s) 1965
SinI GGWCC 1 cut(s) 1550
SlaI CTCGAG 1 cut(s) 1965
SmiMI CAYNNNNRTG 4 cut(s) 2535, 2610, 2852, 2858
SmlI CTYRAG 4 cut(s) 168, 485, 1965, 2350
SmoI CTYRAG 4 cut(s) 168, 485, 1965, 2350
SpeI ACTAGT 3 cut(s) 110, 335, 1070
SphI GCATGC 2 cut(s) 1941, 2349
SsiI CCGC 4 cut(s) 639, 679, 2658, 3011
SspI AATATT 3 cut(s) 754, 880, 2491
SstI GAGCTC 1 cut(s) 194
StyD4I CCNGG 7 cut(s) 135, 955, 1164, 1347, 2215, 2364, 2681
StyI CCWWGG 6 cut(s) 346, 1639, 2069, 2746, 2853, 2874
TaaI ACNGT 2 cut(s) 102, 575
TaiI ACGT 5 cut(s) 16, 85, 411, 919, 2095
TaqI TCGA 9 cut(s) 16, 147, 515, 542, 1744, 1919, 1966, 1981, 2499
TatI WGTACW 3 cut(s) 467, 1067, 2397
TauI GCSGC 2 cut(s) 641, 682
TfiI GAWTC 4 cut(s) 89, 203, 517, 3065
TscAI CASTG 6 cut(s) 105, 442, 470, 1261, 2854, 2979
TseFI GTSAC 2 cut(s) 2612, 2909
TseI GCWGC 3 cut(s) 95, 142, 2896
Tsp45I GTSAC 2 cut(s) 2612, 2909
TspGWI ACGGA 4 cut(s) 170, 196, 1447, 2731
TspRI CASTG 6 cut(s) 105, 442, 470, 1261, 2854, 2979
Tth111I GACNNNGTC 1 cut(s) 1528
Van91I CCANNNNNTGG 2 cut(s) 2720, 2875
VneI GTGCAC 1 cut(s) 2007
VpaK11BI GGWCC 1 cut(s) 1550
XagI CCTNNNNNAGG 2 cut(s) 312, 2639
XapI RAATTY 9 cut(s) 265, 372, 444, 698, 845, 1042, 1052, 1174, 1626
XbaI TCTAGA 2 cut(s) 905, 2584
XceI RCATGY 4 cut(s) 240, 1941, 2349, 2818
XcmI CCANNNNNNNNNTGG 1 cut(s) 2281
XhoI CTCGAG 1 cut(s) 1965
XmaJI CCTAGG 1 cut(s) 346
XmnI GAANNNNTTC 3 cut(s) 322, 610, 2136
Zsp2I ATGCAT 2 cut(s) 74, 1848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.