Prupe.6G248100_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
24418315 .. 24422233
3919 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G248100.1

Sequence Viewer

Length: 3288 bp
ATGAGTATAGTAGGGTTTCTTCTTTCTTATGCATGCATTTGTGTAAACAAAACACTTTCGATCCACACAAAAAAAAAAAAAACACTTGGTTTCTTATTTGCTCTGTTTTTACAAAAAGGGATGGAGCACTCACGCACTACTCATAGTAGGATGATTTTGTTTACATTCCTTCATGGGTTCATCATTTTATGTATGAGCACACCTTTGGAATCTGCAACTCTACCCAGTGCCAGTGCTAATGCTTCTGGAAATGAAACTGATTGCGTGGCGCTGCTGGACTTGAAGAAAAGAATCACTCAAGATCCTCTCCACGTCATGAGCTCATGGAATGATTCAATTCATTTCTGCAGTTGGGTTGGCGTTACGTGCAACCCTTCCACCAAAAGAGTCTTGATTTTGGACTTGAGTTCTTATAAATTGGCAGGCTCTCTACCACCTTCCATTGGAAATCTTACTCATCTTACTGGACTCAGCCTCAGAAACAACAGGTTCCATGGTGAAATTCCTCAAGAAATGGGTCGTCTACGAAGCCTGCAAGCTCTTAACCTGTCTGAAAATTCCTTGGGCGGGAAAATTCCAACTAACATATCGCACTGTACCCAACTAAGGGTGCTGGATCTTCGATTCAATGCGATTACTGGGTCGATTCCCGACGACCTCAGATCATTGATGAGTTTAAATCACCTAGAACTTTATAGCAACAAACTGACTGGAACTATCCCAAGTTGGATTGGAAATTTTTCATCTCTAAAAGGCCTTCGTCTGACTCGCAACAATTTTCATGGGAACATACCCAGTGAGCTCGGTCGTCTGACAAGCTTGGAGGTGTTCTCGCTAGCAGCGAATAATCTGTATGGTATTATTCCTTCTTCAATCTATAATATTTCTTCCATAAAGAATTTTAGTGTTTCTGCCAACCAGCTCCATGGAGAGGTACCACGAAATCTCGGCATTAATCTTCCTAATCTCGAAAGTTTTATGTGTGGTAGCAACAAATTCACGGGAACTGTTCCCGCATCGTTGTTCAATTCTTCTAGAATTCAGATCCTTGATTTTCCTTCTAATGGTTTCACGGGGACAGTCCCTGCTGAAAATCTTGGAACCTTGCGAAGCTTAGTTAGCCTAAGCTTTGCTGACAATAGTTTGGGAAACAAGAAAACTGACGATTTGAATTTCCTCAGCTTCTTGGCTAATTGTACTAGCCTAAAGGCATTGGATCTTTCTAGTAATCAATTTGGAGGAGAATTTCCACGATCCATAGCCAACCTTTCCACCCAACTAAGATCTCTTTATTTGGGGGGCAATTTAATCCACGGAAGCATTCCTGACGACATTGGAAATCTTGTAAACTTAACCTTGTTAGCAATGGAGCTTAACCATCTAACTGGTACAGTCCCAGATGGAATTGGGAAGCTTCAAAAGTTAGCGGGACTGTATTTGAATGATAACCAATTTTCTGGACCAATAGCGTCCTCTCTGGGTAATTTGACTTCAGTGACACAACTGTACATGTTCAACAACAGGTTTGAGGGAAGTATACCTCCAAGTCTTGGGAATTGCCGAAGTCTACTCGAACTCAAACTTTCTTATAACAATATAACAGGCACCATACCTAGAGAGCTTTTCGAAGTTTCATCCCTTTCAATTTCTTTGGAAATTTCTCAAAATTATTTAACTGGTTCGTTACCATATGAAGTGGGTGATTTGGTAAATCTTGTGGAGCTGGATGTATCAGGAAATAAGTTATCAGGTGAAATTCCAACAACTCTTGGCAGTTGTATTATGTTGATGCGCCTGTATTTGGAAGGTAATGAATTTGAAGGAACAATTCCTCAATCTCTTAAAAGTTTAAGAAGTCTGGAAGAAATAGATATTTCACGCAACAACTTATCAGGGCAGATTCCTGAAATTTTAGGCATGTTAACGCATCTTAACCGTCTCAATCTTTCTTATAATGATTTTGAGGGTGAATTGCCTAAAGAAGGGATCTTTTCAAATGCAAGTGGTCTCTCAGTTATTGGAAACAATAGGCTTTGTGGTGGCCTCCCAAAATTACGTCTACATGCCTGCTCCATCAAAAAGTCCCATTCATCTCAACGACTACTTGCCCCGAAGGTAATCATTCCTGTAGCTTGTGCACTTGCATTCATAATCGCTTTGTCATGCTTCCTCATTGCTCGTTCAAAGGTGAAAAAGTCAAGAGGTGGACCTGCAGCTTCACATTCTTATAAGGGTTGGAAATCAATCTCTTACTCAGAACTTGTTCAATCAACTGGCGGGTTCTCTGTGGACAATCTGATTGGTTCGGGAAGTTTTGGTTCTGTTTACAAAGGAGTACTTCCTGCTGATGGGAGGGCAGTTGCTGTTAAGGTACTAAACCTTCAACAACAAGGAGCTTCCAAGAGTTTCATTGATGAATGCAAAGTTTTAAGAAGCATACGACACCGTAATCTTCTCAAGATCATAAGTGCATGCTCGAGCGTTGATAATCAGGGTAATGACTTCATGAGTCTAATTTTCGAGTTCATGGCCAATGGAAGTCTAGACTCATGGTTGCATCCGAGAGATGATGATGAATCTCAAAGTAAGAGATTGAGCCTTATCCAAAGGCTCAATATTGCAATTGATGTTGCTTCTGCATTAGATTATCTCCACCGCCATTGTGAAACAACCATTGTTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTTGGTGATGATATGGTTGCCCATGTTGGTGACTTTGGTTTAGCAAAGTTCCTCTTCGAAGCATCAGATAGTTCCTCCCAAAGTCAAACCATTTCTGCTGGGCTAAGGGGTTCCATCGGTTACATTCCTCCGGAGTATGGCATGGGCGGCCAAGTTTCCATCTTGGGAGATATTTATAGCTTTGGAATACTATTGCTAGAAATGTTCACAGGAAAAAGCCCTACAGATGACATGTTCACAGAAGGTCTAAGCATTCACCAATTCACAGCCATGGCAATGCCTGACCATGCCATGGACATTATTGACCCTTCATTGCTCACTGAGAGAGATGATGCAGATGTTGATGATGAAAGATACAACAATGACATAAAAGCAAGGCCAATTACAAGTTATCAGGATGGCAGCCCTATTCGTGCAACAAGATTGGAAGAGTGTTTGGTTTCGGTAATGGAGATAGGACTCTCATGCTCTGCAATATTACCATCTGAGCGGATACAAATGGATGTTGTTATGAACAAAATGAAGGCAGCTAGAGACTCATATCTCTATTTGAGAAGAAGAAGGAGAATAAGAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1096

Amino Acids

119.63

Weight (kDa)

7.31

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 414, 1590, 1953, 2229
Acc36I ACCTGC 1 cut(s) 2218
Acc65I GGTACC 1 cut(s) 934
AccB1I GGYRCC 2 cut(s) 934, 1604
AccB7I CCANNNNNTGG 2 cut(s) 1550, 3001
AccBSI CCGCTC 1 cut(s) 3199
AccI GTMKAC 4 cut(s) 523, 1537, 1567, 2059
AccIII TCCGGA 1 cut(s) 2839
AciI CCGC 7 cut(s) 567, 1014, 1427, 2277, 2656, 2856, 3199
AclWI GGATC 7 cut(s) 55, 296, 624, 1039, 1224, 1248, 1994
AcoI YGGCCR 2 cut(s) 2529, 2857
AcuI CTGAAG 1 cut(s) 1476
AfaI GTAC 7 cut(s) 598, 936, 1198, 1390, 1508, 2337, 2373
AflIII ACRYGT 2 cut(s) 1509, 2940
AjiI CACGTC 1 cut(s) 313
Alw21I GWGCWC 5 cut(s) 129, 200, 323, 804, 2140
Alw26I GTCTC 3 cut(s) 1943, 2012, 3237
Alw44I GTGCAC 1 cut(s) 2136
AlwI GGATC 7 cut(s) 55, 296, 624, 1039, 1224, 1248, 1994
AlwNI CAGNNNCTG 2 cut(s) 1085, 2363
Ama87I CYCGRG 1 cut(s) 2476
Aor13HI TCCGGA 1 cut(s) 2839
AoxI GGCC 5 cut(s) 754, 2041, 2529, 2857, 3086
ApaLI GTGCAC 1 cut(s) 2136
ApeKI GCWGC 5 cut(s) 271, 839, 2213, 3111, 3236
AseI ATTAAT 1 cut(s) 954
Asp700I GAANNNNTTC 2 cut(s) 739, 2262
Asp718I GGTACC 1 cut(s) 934
AspLEI GCGC 2 cut(s) 271, 1794
AspS9I GGNCC 2 cut(s) 1460, 2207
AsuHPI GGTGA 9 cut(s) 509, 674, 1712, 1763, 1979, 2200, 2726, 2750, 2957
AsuII TTCGAA 2 cut(s) 1626, 2766
AsuNHI GCTAGC 1 cut(s) 835
AvaI CYCGRG 1 cut(s) 2476
AvaII GGWCC 2 cut(s) 1460, 2207
BaeGI GKGCMC 1 cut(s) 2140
BalI TGGCCA 1 cut(s) 2531
BanI GGYRCC 2 cut(s) 934, 1604
BanII GRGCYC 2 cut(s) 323, 804
BarI GAAGNNNNNNTAC 7 cut(s) 35, 850, 882, 1474, 1506, 2364, 2396
Bbv12I GWGCWC 5 cut(s) 129, 200, 323, 804, 2140
BbvCI CCTCAGC 1 cut(s) 1178
BbvI GCAGC 5 cut(s) 258, 851, 2225, 3123, 3248
BccI CCATC 9 cut(s) 115, 1386, 1394, 2081, 2342, 2831, 2876, 3101, 3199
BciVI GTATCC 1 cut(s) 3195
BcoDI GTCTC 3 cut(s) 1943, 2012, 3237
BfmI CTRYAG 4 cut(s) 346, 2127, 2211, 2931
BfoI RGCGCY 1 cut(s) 272
BfuAI ACCTGC 1 cut(s) 2218
BfuI GTATCC 1 cut(s) 3195
BglII AGATCT 1 cut(s) 1283
BisI GCNGC 6 cut(s) 272, 840, 2214, 2857, 3112, 3237
BlsI GCNGC 6 cut(s) 273, 841, 2215, 2858, 3113, 3238
BmcAI AGTACT 1 cut(s) 2337
Bme18I GGWCC 2 cut(s) 1460, 2207
BmeT110I CYCGRG 1 cut(s) 2476
BmgBI CACGTC 1 cut(s) 313
BmgT120I GGNCC 2 cut(s) 1460, 2207
BmiI GGNNCC 5 cut(s) 491, 936, 1102, 1606, 2821
BmrI ACTGGG 3 cut(s) 219, 648, 789
BmsI GCATC 6 cut(s) 1025, 1779, 1936, 2566, 2780, 3031
BmtI GCTAGC 1 cut(s) 839
BmuI ACTGGG 3 cut(s) 219, 648, 789
BplI GAGNNNNNCTC 2 cut(s) 815, 847
Bpu10I CCTNAGC 3 cut(s) 1124, 1178, 2813
Bpu14I TTCGAA 2 cut(s) 1626, 2766
BpuEI CTTGAG 4 cut(s) 282, 424, 492, 2441
BsaAI YACGTR 1 cut(s) 366
BsaI GGTCTC 1 cut(s) 2012
BsaJI CCNNGG 6 cut(s) 493, 561, 925, 1312, 2979, 3000
BsaWI WCCGGW 1 cut(s) 2839
Bse1I ACTGG 9 cut(s) 225, 231, 469, 643, 715, 795, 1390, 1681, 2278
Bse3DI GCAATG 5 cut(s) 1371, 2172, 2707, 2991, 3020
BseAI TCCGGA 1 cut(s) 2839
BseDI CCNNGG 6 cut(s) 493, 561, 925, 1312, 2979, 3000
BseGI GGATG 7 cut(s) 126, 156, 1634, 1732, 2557, 3112, 3217
BseMI GCAATG 5 cut(s) 1371, 2172, 2707, 2991, 3020
BseMII CTCAG 8 cut(s) 484, 490, 673, 1192, 2025, 2268, 3021, 3186
BseNI ACTGG 9 cut(s) 225, 231, 469, 643, 715, 795, 1390, 1681, 2278
BseRI GAGGAG 1 cut(s) 1254
BseSI GKGCMC 1 cut(s) 2140
BseXI GCAGC 5 cut(s) 258, 851, 2225, 3123, 3248
BseYI CCCAGC 1 cut(s) 2807
Bsh1285I CGRYCG 1 cut(s) 808
BshFI GGCC 5 cut(s) 756, 2043, 2531, 2859, 3088
BshNI GGYRCC 2 cut(s) 934, 1604
BsiEI CGRYCG 1 cut(s) 808
BsiHKAI GWGCWC 5 cut(s) 129, 200, 323, 804, 2140
BsiHKCI CYCGRG 1 cut(s) 2476
BsiSI CCGG 1 cut(s) 2840
BslFI GGGAC 5 cut(s) 1067, 1090, 1379, 1443, 2068
BsmAI GTCTC 3 cut(s) 1943, 2012, 3237
BsmBI CGTCTC 1 cut(s) 1943
BsmFI GGGAC 5 cut(s) 1067, 1090, 1379, 1443, 2068
BsmI GAATGC 4 cut(s) 1320, 2144, 2423, 2961
BsnI GGCC 5 cut(s) 756, 2043, 2531, 2859, 3088
Bso31I GGTCTC 1 cut(s) 2012
BsoBI CYCGRG 1 cut(s) 2476
Bsp119I TTCGAA 2 cut(s) 1626, 2766
Bsp1286I GDGCHC 5 cut(s) 129, 200, 323, 804, 2140
Bsp13I TCCGGA 1 cut(s) 2839
Bsp1407I TGTACA 1 cut(s) 1506
Bsp19I CCATGG 4 cut(s) 493, 925, 2979, 3000
BspACI CCGC 7 cut(s) 567, 1014, 1427, 2277, 2656, 2856, 3199
BspANI GGCC 5 cut(s) 756, 2043, 2531, 2859, 3088
BspCNI CTCAG 8 cut(s) 483, 489, 672, 1191, 2024, 2267, 3022, 3187
BspEI TCCGGA 1 cut(s) 2839
BspHI TCATGA 2 cut(s) 315, 2505
BspLI GGNNCC 5 cut(s) 491, 936, 1102, 1606, 2821
BspMAI CTGCAG 2 cut(s) 350, 2215
BspMI ACCTGC 1 cut(s) 2218
BspOI GCTAGC 1 cut(s) 839
BspPI GGATC 7 cut(s) 55, 296, 624, 1039, 1224, 1248, 1994
BspT104I TTCGAA 2 cut(s) 1626, 2766
BspT107I GGYRCC 2 cut(s) 934, 1604
BspTNI GGTCTC 1 cut(s) 2012
BsrBI CCGCTC 1 cut(s) 3199
BsrDI GCAATG 5 cut(s) 1371, 2172, 2707, 2991, 3020
BsrGI TGTACA 1 cut(s) 1506
BsrI ACTGG 9 cut(s) 225, 231, 469, 643, 715, 795, 1390, 1681, 2278
BssECI CCNNGG 6 cut(s) 493, 561, 925, 1312, 2979, 3000
BssNAI GTATAC 1 cut(s) 1538
BssT1I CCWWGG 5 cut(s) 493, 561, 925, 2979, 3000
Bst1107I GTATAC 1 cut(s) 1538
Bst4CI ACNGT 8 cut(s) 596, 1009, 1081, 1393, 1434, 1506, 1937, 2447
Bst6I CTCTTC 2 cut(s) 2768, 3132
BstAUI TGTACA 1 cut(s) 1506
BstBAI YACGTR 1 cut(s) 366
BstBI TTCGAA 2 cut(s) 1626, 2766
BstC8I GCNNGC 7 cut(s) 34, 424, 533, 537, 837, 2068, 2473
BstDSI CCRYGG 5 cut(s) 493, 925, 1312, 2979, 3000
BstENI CCTNNNNNAGG 1 cut(s) 1980
BstF5I GGATG 7 cut(s) 126, 156, 1634, 1732, 2557, 3112, 3217
BstH2I RGCGCY 1 cut(s) 272
BstHHI GCGC 2 cut(s) 271, 1794
BstMAI GTCTC 3 cut(s) 1943, 2012, 3237
BstMCI CGRYCG 1 cut(s) 808
BstMWI GCNNNNNNNGC 3 cut(s) 366, 1119, 2856
BstNSI RCATGY 6 cut(s) 36, 1513, 1921, 2066, 2475, 2944
BstSFI CTRYAG 4 cut(s) 346, 2127, 2211, 2931
BstSLI GKGCMC 1 cut(s) 2140
BstV1I GCAGC 5 cut(s) 258, 851, 2225, 3123, 3248
BstX2I RGATCY 6 cut(s) 301, 616, 1044, 1216, 1283, 1986
BstXI CCANNNNNNTGG 3 cut(s) 926, 1385, 1457
BstYI RGATCY 6 cut(s) 301, 616, 1044, 1216, 1283, 1986
BstZ17I GTATAC 1 cut(s) 1538
BsuI GTATCC 1 cut(s) 3195
BsuRI GGCC 5 cut(s) 756, 2043, 2531, 2859, 3088
BtgI CCRYGG 5 cut(s) 493, 925, 1312, 2979, 3000
BtrI CACGTC 1 cut(s) 313
BtsCI GGATG 7 cut(s) 126, 156, 1634, 1732, 2557, 3112, 3217
BtsIMutI CAGTG 6 cut(s) 232, 238, 592, 802, 1500, 3027
BveI ACCTGC 1 cut(s) 2218
Cac8I GCNNGC 7 cut(s) 34, 424, 533, 537, 837, 2068, 2473
CaiI CAGNNNCTG 2 cut(s) 1085, 2363
CciI TCATGA 2 cut(s) 315, 2505
CfoI GCGC 2 cut(s) 271, 1794
Cfr13I GGNCC 2 cut(s) 1460, 2207
CseI GACGC 1 cut(s) 1458
Csp6I GTAC 7 cut(s) 597, 935, 1197, 1389, 1507, 2336, 2372
CspCI CAANNNNNGTGG 2 cut(s) 2642, 2677
CviQI GTAC 7 cut(s) 597, 935, 1197, 1389, 1507, 2336, 2372
DraI TTTAAA 1 cut(s) 678
EaeI YGGCCR 2 cut(s) 2529, 2857
Eam1104I CTCTTC 2 cut(s) 2768, 3132
EarI CTCTTC 2 cut(s) 2768, 3132
Ecl136II GAGCTC 2 cut(s) 321, 802
Eco130I CCWWGG 5 cut(s) 493, 561, 925, 2979, 3000
Eco147I AGGCCT 1 cut(s) 756
Eco24I GRGCYC 2 cut(s) 323, 804
Eco31I GGTCTC 1 cut(s) 2012
Eco47I GGWCC 2 cut(s) 1460, 2207
Eco53kI GAGCTC 2 cut(s) 321, 802
Eco57I CTGAAG 1 cut(s) 1476
Eco88I CYCGRG 1 cut(s) 2476
EcoICRI GAGCTC 2 cut(s) 321, 802
EcoNI CCTNNNNNAGG 1 cut(s) 1980
EcoRI GAATTC 1 cut(s) 1038
EcoT14I CCWWGG 5 cut(s) 493, 561, 925, 2979, 3000
EcoT22I ATGCAT 2 cut(s) 34, 38
EcoT38I GRGCYC 2 cut(s) 323, 804
ErhI CCWWGG 5 cut(s) 493, 561, 925, 2979, 3000
Esp3I CGTCTC 1 cut(s) 1943
FalI AAGNNNNNCTT 4 cut(s) 2322, 2354, 2747, 2779
FaqI GGGAC 5 cut(s) 1067, 1090, 1379, 1443, 2068
FauI CCCGC 4 cut(s) 560, 1021, 1420, 2270
FauNDI CATATG 1 cut(s) 1690
FblI GTMKAC 4 cut(s) 523, 1537, 1567, 2059
Fnu4HI GCNGC 6 cut(s) 272, 840, 2214, 2857, 3112, 3237
FokI GGATG 7 cut(s) 133, 163, 1621, 1739, 2544, 3119, 3224
FriOI GRGCYC 2 cut(s) 323, 804
Fsp4HI GCNGC 6 cut(s) 272, 840, 2214, 2857, 3112, 3237
GlaI GCGC 2 cut(s) 270, 1793
GluI GCNGC 6 cut(s) 272, 840, 2214, 2857, 3112, 3237
GsaI CCCAGC 1 cut(s) 2811
HaeII RGCGCY 1 cut(s) 272
HaeIII GGCC 5 cut(s) 756, 2043, 2531, 2859, 3088
HapII CCGG 1 cut(s) 2840
HgaI GACGC 1 cut(s) 1458
HhaI GCGC 2 cut(s) 271, 1794
Hin6I GCGC 2 cut(s) 269, 1792
HinP1I GCGC 2 cut(s) 269, 1792
HincII GTYRAC 1 cut(s) 1923
HindII GTYRAC 1 cut(s) 1923
HindIII AAGCTT 4 cut(s) 817, 1111, 1126, 1412
HpaI GTTAAC 1 cut(s) 1923
HpaII CCGG 1 cut(s) 2840
HphI GGTGA 9 cut(s) 509, 674, 1712, 1763, 1979, 2200, 2726, 2750, 2957
Hpy99I CGWCG 1 cut(s) 656
HpyCH4III ACNGT 8 cut(s) 596, 1009, 1081, 1393, 1434, 1506, 1937, 2447
HpyCH4IV ACGT 3 cut(s) 312, 365, 2056
HpyF10VI GCNNNNNNNGC 3 cut(s) 366, 1119, 2856
HpySE526I ACGT 3 cut(s) 312, 365, 2056
HspAI GCGC 2 cut(s) 269, 1792
Kpn2I TCCGGA 1 cut(s) 2839
KpnI GGTACC 1 cut(s) 938
KspAI GTTAAC 1 cut(s) 1923
LmnI GCTCC 6 cut(s) 124, 927, 1369, 1720, 2075, 2393
Lsp1109I GCAGC 5 cut(s) 258, 851, 2225, 3123, 3248
LweI GCATC 6 cut(s) 1025, 1779, 1936, 2566, 2780, 3031
MaeII ACGT 3 cut(s) 312, 365, 2056
MaeIII GTNAC 5 cut(s) 361, 1495, 1683, 2738, 2828
MbiI CCGCTC 1 cut(s) 3199
MfeI CAATTG 1 cut(s) 2622
MflI RGATCY 6 cut(s) 301, 616, 1044, 1216, 1283, 1986
MhlI GDGCHC 5 cut(s) 129, 200, 323, 804, 2140
MlsI TGGCCA 1 cut(s) 2531
MluNI TGGCCA 1 cut(s) 2531
MlyI GAGTC 7 cut(s) 396, 462, 760, 2518, 2540, 3162, 3239
MmeI TCCRAC 4 cut(s) 602, 707, 1784, 2216
Mox20I TGGCCA 1 cut(s) 2531
Mph1103I ATGCAT 2 cut(s) 34, 38
MroI TCCGGA 1 cut(s) 2839
MroXI GAANNNNTTC 2 cut(s) 739, 2262
MscI TGGCCA 1 cut(s) 2531
MslI CAYNNNNRTG 3 cut(s) 2736, 2978, 2984
Msp20I TGGCCA 1 cut(s) 2531
MspI CCGG 1 cut(s) 2840
MunI CAATTG 1 cut(s) 2622
Mva1269I GAATGC 4 cut(s) 1320, 2144, 2423, 2961
MwoI GCNNNNNNNGC 3 cut(s) 366, 1119, 2856
NcoI CCATGG 4 cut(s) 493, 925, 2979, 3000
NdeI CATATG 1 cut(s) 1690
NheI GCTAGC 1 cut(s) 835
NlaIV GGNNCC 5 cut(s) 491, 936, 1102, 1606, 2821
NmeAIII GCCGAG 1 cut(s) 927
NmuCI GTSAC 2 cut(s) 1495, 2738
NsiI ATGCAT 2 cut(s) 34, 38
NspI RCATGY 6 cut(s) 36, 1513, 1921, 2066, 2475, 2944
NspV TTCGAA 2 cut(s) 1626, 2766
PaeI GCATGC 2 cut(s) 36, 2475
PaeR7I CTCGAG 1 cut(s) 2476
PagI TCATGA 2 cut(s) 315, 2505
PceI AGGCCT 1 cut(s) 756
PciI ACATGT 2 cut(s) 1509, 2940
PcsI WCGNNNNNNNCGW 1 cut(s) 839
PctI GAATGC 4 cut(s) 1320, 2144, 2423, 2961
PdmI GAANNNNTTC 2 cut(s) 739, 2262
PfeI GAWTC 7 cut(s) 209, 291, 332, 624, 646, 1900, 2576
PflMI CCANNNNNTGG 2 cut(s) 1550, 3001
PkrI GCNGC 6 cut(s) 273, 841, 2215, 2858, 3113, 3238
PleI GAGTC 7 cut(s) 395, 462, 760, 2517, 2540, 3162, 3239
PpsI GAGTC 7 cut(s) 395, 462, 760, 2517, 2540, 3162, 3239
Ppu21I YACGTR 1 cut(s) 366
PscI ACATGT 2 cut(s) 1509, 2940
PshBI ATTAAT 1 cut(s) 954
PsiI TTATAA 4 cut(s) 414, 1590, 1953, 2229
Psp124BI GAGCTC 2 cut(s) 323, 804
PspFI CCCAGC 1 cut(s) 2807
PspN4I GGNNCC 5 cut(s) 491, 936, 1102, 1606, 2821
PspPI GGNCC 2 cut(s) 1460, 2207
PspXI VCTCGAGB 1 cut(s) 2476
PstI CTGCAG 2 cut(s) 350, 2215
PstNI CAGNNNCTG 2 cut(s) 1085, 2363
PsuI RGATCY 6 cut(s) 301, 616, 1044, 1216, 1283, 1986
RsaI GTAC 7 cut(s) 598, 936, 1198, 1390, 1508, 2337, 2373
RsaNI GTAC 7 cut(s) 597, 935, 1197, 1389, 1507, 2336, 2372
RseI CAYNNNNRTG 3 cut(s) 2736, 2978, 2984
SacI GAGCTC 2 cut(s) 323, 804
SatI GCNGC 6 cut(s) 272, 840, 2214, 2857, 3112, 3237
Sau96I GGNCC 2 cut(s) 1460, 2207
ScaI AGTACT 1 cut(s) 2337
SchI GAGTC 7 cut(s) 396, 462, 760, 2518, 2540, 3162, 3239
SduI GDGCHC 5 cut(s) 129, 200, 323, 804, 2140
SfaNI GCATC 6 cut(s) 1025, 1779, 1936, 2566, 2780, 3031
SfcI CTRYAG 4 cut(s) 346, 2127, 2211, 2931
Sfr274I CTCGAG 1 cut(s) 2476
SfuI TTCGAA 2 cut(s) 1626, 2766
SinI GGWCC 2 cut(s) 1460, 2207
SlaI CTCGAG 1 cut(s) 2476
SmiMI CAYNNNNRTG 3 cut(s) 2736, 2978, 2984
SmlI CTYRAG 5 cut(s) 297, 403, 507, 2456, 2476
SmoI CTYRAG 5 cut(s) 297, 403, 507, 2456, 2476
SphI GCATGC 2 cut(s) 36, 2475
SseBI AGGCCT 1 cut(s) 756
SsiI CCGC 7 cut(s) 567, 1014, 1427, 2277, 2656, 2856, 3199
SspI AATATT 3 cut(s) 883, 2617, 3186
SstI GAGCTC 2 cut(s) 323, 804
StuI AGGCCT 1 cut(s) 756
StyI CCWWGG 5 cut(s) 493, 561, 925, 2979, 3000
TaaI ACNGT 8 cut(s) 596, 1009, 1081, 1393, 1434, 1506, 1937, 2447
TaiI ACGT 3 cut(s) 315, 368, 2059
TaqI TCGA 9 cut(s) 59, 622, 644, 969, 1572, 1626, 2477, 2520, 2766
TaqII GACCGA 1 cut(s) 794
TatI WGTACW 3 cut(s) 1196, 1506, 2335
TauI GCSGC 1 cut(s) 2859
TfiI GAWTC 7 cut(s) 209, 291, 332, 624, 646, 1900, 2576
TscAI CASTG 6 cut(s) 232, 238, 599, 802, 1500, 3034
TseFI GTSAC 2 cut(s) 1495, 2738
TseI GCWGC 5 cut(s) 271, 839, 2213, 3111, 3236
Tsp45I GTSAC 2 cut(s) 1495, 2738
TspGWI ACGGA 1 cut(s) 1329
TspRI CASTG 6 cut(s) 232, 238, 599, 802, 1500, 3034
Van91I CCANNNNNTGG 2 cut(s) 1550, 3001
VneI GTGCAC 1 cut(s) 2136
VpaK11BI GGWCC 2 cut(s) 1460, 2207
VspI ATTAAT 1 cut(s) 954
XagI CCTNNNNNAGG 1 cut(s) 1980
XbaI TCTAGA 2 cut(s) 1034, 2542
XceI RCATGY 6 cut(s) 36, 1513, 1921, 2066, 2475, 2944
XhoI CTCGAG 1 cut(s) 2476
XmiI GTMKAC 4 cut(s) 523, 1537, 1567, 2059
XmnI GAANNNNTTC 2 cut(s) 739, 2262
ZrmI AGTACT 1 cut(s) 2337
Zsp2I ATGCAT 2 cut(s) 34, 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.