Rmu_sc0000923.1_g000018

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000923.1
OG0000262
Physical Location & Seq
Reverse (-)
72129 .. 75434
3306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000923.1_g000018.1.cds

Sequence Viewer

Length: 3075 bp
atgcatgagcacagttctggaatctgcaacaccgcccactttcggaaatgcatccgatctcctggcattactagatttcaagagaagcatatcactaaagatcctggccatatcatgagctcatggaacaattccatccctttctgcagttgggcaggcgttacatgcaacccttccaacaatcgagtcatcattctgaacctggaggctcaagaactggaaggcttcataccaccttcaataggaaatcttacttatcttactcaactcaacctcacagacaacaaatttcgtggtggaattcctcaagaattgggccgtctactgcgcttgcaacagctcaacctgatggccaattccttgtgggggaatgttccaactaatatatctcactgttcccaactaagagtgctcgatcttggtgacaatggacttactgggtcaattccagaccaactcagttcactgtttgagttgactcatctgtggcttgatacaaacattctcacaggaagtgttccagcatggttaggaaacttttcttctttgtatgcattttcttttggtgagaacaatctccaaggaagcatacccagtgagctagggggtctaacaagtttgagaagattcgtacttgccgataataatctttctggtacagttccttcttcaatctacaatatttcctcattatactacttcactgtcacttccaaccacctgcatggagagttgccgccaaatgttggcataactcttcctaatctcgaagtttttgctggtggcgtcaacaaattcacaggaaacattcctgtatcattgtcaaatgcttctagactccggcttcttgattttgctgaaaatggtcttaccggaaagctccctgctgagtattttggaaccttgggaaggttagtgagaataaactttgatgacaattcactgggaagtgggaaaatcggtgacttgaattctctcactttcctggctaattgtactagacttgaggtgttgagttttatcaataatcgttttggaggagaattaccagaatccataggaaacctttcgaccaaactgagagtgtttagtatgtcaggaaatttggtacacggaagcatccctatcggcattggaaatcttgtaaacttgaccaagctggaactaggagacaacaatttgggtggtagtcttcctgaagaaattgggaagcttcagaagttagagggactgcttttgaatcttaacaaattttctgggccaatcccatcctccttgggtaacttgacttcactaacaaagctattcatggagggcaataggtttgagggaagtataccgccaagtcttggaagctgcaaaaatctactaatacttgacctttccagtaacagtctaaatggcacgatacctaaagaggtaattgcggattcatccctttcaatttcattgacactgtctaacaattacttgactggttcactcccagatgaagtgggtaagttggtgcaacttacagagctagatgtatcaggaaacaagttatcaggtgagattcccacaacccttggcaattgtgttagcttggaacgccttcatttggaagataatgaatttgaaggaacaattccacattcttttaaagatttaagaggcttggaggaaatagatgtatcgggaaatcacttatttggtaaggttcctgaattttttgtccatcttggaaatcttaagaatctcaatctttcttataaccatctcgagggtgaattgccgaaagaaggggttttttcaaatgcaactggtgtatcagttctcggaaatgataagctctgtggtggcatcccagagttacttctacctgcatgttccagcagaaagcctcaatcatctctaggagtacttgcctcagaagtgataatccctgtaagttgtggaatttcattaataattgccttttgttgctgcattgctggacgttcaatggcgaaaaggtcaagagacagatccgtagcatcacgtacttatgaggattggaaatcaggtgtctcttacacagaactcgttcaatcaactgacgggttctctacaaacaatctgattggttcaggaagtttcggttcggtatgcaaaggattactcagtggtgagggaatggtggttgctgttaaggtattaaaccttcaacaacatggagcatcgaagagtttcattgatgaatgcaaagcattaagaagtataaggcaccgcaatcttcttaagatcataactgcctgctcaagcattgataatcagggaaatgacttcaaaagtctagttttcgagttcatggaaaatggaagtctagactcttggctgcatcccagagatgatgagcaatctcaagggaagagattgagcctcatccaaagattgaatattgccatcgatgtggcttctgcaatagagtatctccaccactattgcgaaccatccattgtccattgtgatctaaagcccagcaatgttcttcttgatgaagatatggtagctcatgttggtgactttggtttagcaagcttcctcttggaagcatcggatgatccctccgagattcaaagcatatcaattggactaaagggttccataggctacattcctcaagagtacagcatgggagccaaagtttccatactaggagatatttatagctatgggatactgttgctagaaatgttcacagggagaagacctaccgatgacatgttcaaagatggtctaagcattcaccagtttacagctatggctttgcctgaccatgttatggacgttgttgaccctttgttgctcacagaaagagatgaagaaaatgatgatggtggcagaggcagaaacgatgtccaagaaagaccaacaagacatcaggatcctgacctagtcaaacgaagaggagaggagtgcttggtttcagttatgcatataggagtcttatgctcgtcaatatcaccaagagaacggatatttatggatgtcattgtcaacaaaatgaaggctattagagagtcctatctcaaagtaacaggaagaaggagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1024

Amino Acids

111.58

Weight (kDa)

5.59

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1752
AarI CACCTGC 1 cut(s) 729
Acc36I ACCTGC 2 cut(s) 729, 1870
AccB1I GGYRCC 1 cut(s) 2244
AccB7I CCANNNNNTGG 3 cut(s) 746, 1349, 2803
AccI GTMKAC 2 cut(s) 322, 1336
AciI CCGC 5 cut(s) 33, 737, 1340, 1427, 2248
AclWI GGATC 5 cut(s) 95, 2001, 2576, 2900, 2913
AcoI YGGCCR 2 cut(s) 106, 351
AcsI RAATTY 9 cut(s) 287, 300, 794, 970, 1102, 1250, 1613, 1706, 1938
AcuI CTGAAG 2 cut(s) 1199, 1218
AcyI GRCGYC 1 cut(s) 786
AfaI GTAC 7 cut(s) 633, 658, 997, 1110, 1902, 2023, 2648
AflII CTTAAG 2 cut(s) 1730, 2258
AflIII ACRYGT 1 cut(s) 2742
AjnI CCWGG 4 cut(s) 61, 103, 201, 984
Alw21I GWGCWC 3 cut(s) 12, 122, 414
Alw26I GTCTC 3 cut(s) 1164, 1995, 2053
AlwI GGATC 5 cut(s) 95, 2001, 2576, 2900, 2913
Ama87I CYCGRG 1 cut(s) 1760
AoxI GGCC 4 cut(s) 106, 316, 351, 1259
ApeKI GCWGC 3 cut(s) 1356, 1965, 2356
ApoI RAATTY 9 cut(s) 287, 300, 794, 970, 1102, 1250, 1613, 1706, 1938
AseI ATTAAT 1 cut(s) 1946
Asp700I GAANNNNTTC 5 cut(s) 538, 1066, 1593, 2064, 2207
AspLEI GCGC 1 cut(s) 330
AspS9I GGNCC 2 cut(s) 316, 1259
AsuHPI GGTGA 9 cut(s) 434, 578, 974, 1562, 1778, 2159, 2552, 2759, 2976
AvaI CYCGRG 1 cut(s) 1760
BaeI ACNNNNGTAYC 2 cut(s) 1791, 1824
BalI TGGCCA 2 cut(s) 108, 353
BamHI GGATCC 1 cut(s) 2905
BanI GGYRCC 1 cut(s) 2244
BanII GRGCYC 1 cut(s) 122
BarI GAAGNNNNNNTAC 8 cut(s) 213, 245, 649, 681, 1273, 1305, 2166, 2198
BbsI GAAGAC 2 cut(s) 1184, 2734
Bbv12I GWGCWC 3 cut(s) 12, 122, 414
BbvI GCAGC 3 cut(s) 1343, 1952, 2343
BccI CCATC 9 cut(s) 143, 343, 1276, 1725, 1764, 2432, 2479, 2747, 2849
BceAI ACGGC 1 cut(s) 303
BcgI CGANNNNNNTGC 4 cut(s) 758, 792, 1108, 1142
BciT130I CCWGG 4 cut(s) 63, 105, 203, 986
BciVI GTATCC 1 cut(s) 2691
BcoDI GTCTC 3 cut(s) 1164, 1995, 2053
BfmI CTRYAG 1 cut(s) 145
BfrI CTTAAG 2 cut(s) 1730, 2258
BfuAI ACCTGC 2 cut(s) 729, 1870
BfuI GTATCC 1 cut(s) 2691
BisI GCNGC 4 cut(s) 737, 1357, 1966, 2357
BlsI GCNGC 4 cut(s) 738, 1358, 1967, 2358
BmcAI AGTACT 1 cut(s) 1902
Bme1390I CCNGG 4 cut(s) 63, 105, 203, 986
BmeT110I CYCGRG 1 cut(s) 1760
BmgT120I GGNCC 2 cut(s) 316, 1259
BmiI GGNNCC 6 cut(s) 901, 1701, 2246, 2623, 2659, 2907
BmrFI CCNGG 4 cut(s) 63, 105, 203, 986
BmrI ACTGGG 3 cut(s) 447, 588, 953
BmsI GCATC 7 cut(s) 60, 1128, 1851, 2024, 2207, 2368, 2582
BmuI ACTGGG 3 cut(s) 447, 588, 953
BpiI GAAGAC 2 cut(s) 1184, 2734
BpmI CTGGAG 1 cut(s) 224
BpuEI CTTGAG 6 cut(s) 195, 291, 1025, 2263, 2367, 2625
Bsa29I ATCGAT 1 cut(s) 2427
BsaAI YACGTR 1 cut(s) 2021
BsaBI GATNNNNATC 1 cut(s) 645
BsaHI GRCGYC 1 cut(s) 786
BsaJI CCNNGG 4 cut(s) 580, 903, 1275, 1567
BsaWI WCCGGW 1 cut(s) 872
BsaXI ACNNNNNCTCC 2 cut(s) 2649, 2679
Bse1I ACTGG 8 cut(s) 222, 442, 594, 948, 1386, 1480, 1807, 2770
Bse3DI GCAATG 2 cut(s) 1968, 2509
Bse8I GATNNNNATC 1 cut(s) 645
BseBI CCWGG 4 cut(s) 63, 105, 203, 986
BseCI ATCGAT 1 cut(s) 2427
BseDI CCNNGG 4 cut(s) 580, 903, 1275, 1567
BseJI GATNNNNATC 1 cut(s) 645
BseMI GCAATG 2 cut(s) 1968, 2509
BseMII CTCAG 5 cut(s) 472, 879, 1070, 1923, 2155
BseNI ACTGG 8 cut(s) 222, 442, 594, 948, 1386, 1480, 1807, 2770
BseRI GAGGAG 3 cut(s) 1053, 2943, 2948
BseXI GCAGC 3 cut(s) 1343, 1952, 2343
BseYI CCCAGC 1 cut(s) 2498
BshFI GGCC 4 cut(s) 108, 318, 353, 1261
BshNI GGYRCC 1 cut(s) 2244
BshVI ATCGAT 1 cut(s) 2427
BsiHKAI GWGCWC 3 cut(s) 12, 122, 414
BsiHKCI CYCGRG 1 cut(s) 1760
BsiSI CCGG 2 cut(s) 841, 873
BslFI GGGAC 1 cut(s) 1242
BsmAI GTCTC 3 cut(s) 1164, 1995, 2053
BsmFI GGGAC 1 cut(s) 1242
BsmI GAATGC 2 cut(s) 2225, 2763
BsnI GGCC 4 cut(s) 108, 318, 353, 1261
BsoBI CYCGRG 1 cut(s) 1760
Bsp1286I GDGCHC 3 cut(s) 12, 122, 414
Bsp143I GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
BspACI CCGC 5 cut(s) 33, 737, 1340, 1427, 2248
BspANI GGCC 4 cut(s) 108, 318, 353, 1261
BspCNI CTCAG 5 cut(s) 471, 880, 1071, 1922, 2154
BspDI ATCGAT 1 cut(s) 2427
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 6 cut(s) 901, 1701, 2246, 2623, 2659, 2907
BspMAI CTGCAG 1 cut(s) 149
BspMI ACCTGC 2 cut(s) 729, 1870
BspPI GGATC 5 cut(s) 95, 2001, 2576, 2900, 2913
BspT107I GGYRCC 1 cut(s) 2244
BspTI CTTAAG 2 cut(s) 1730, 2258
BsrDI GCAATG 2 cut(s) 1968, 2509
BsrI ACTGG 8 cut(s) 222, 442, 594, 948, 1386, 1480, 1807, 2770
BssECI CCNNGG 4 cut(s) 580, 903, 1275, 1567
BssMI GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
BssNAI GTATAC 1 cut(s) 1337
BssNI GRCGYC 1 cut(s) 786
BssT1I CCWWGG 4 cut(s) 580, 903, 1275, 1567
Bst1107I GTATAC 1 cut(s) 1337
Bst2UI CCWGG 4 cut(s) 63, 105, 203, 986
Bst4CI ACNGT 8 cut(s) 14, 395, 468, 661, 706, 1394, 1458, 2703
Bst6I CTCTTC 4 cut(s) 762, 2198, 2384, 2920
BstACI GRCGYC 1 cut(s) 786
BstAFI CTTAAG 2 cut(s) 1730, 2258
BstBAI YACGTR 1 cut(s) 2021
BstC8I GCNNGC 4 cut(s) 157, 332, 2275, 2557
BstDEI CTNAG 7 cut(s) 404, 458, 888, 1079, 1909, 2141, 2759
BstENI CCTNNNNNAGG 2 cut(s) 240, 907
BstHHI GCGC 1 cut(s) 330
BstKTI GATC 8 cut(s) 59, 103, 418, 2009, 2265, 2491, 2584, 2908
BstMAI GTCTC 3 cut(s) 1164, 1995, 2053
BstMBI GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
BstMWI GCNNNNNNNGC 2 cut(s) 165, 1590
BstNI CCWGG 4 cut(s) 63, 105, 203, 986
BstNSI RCATGY 3 cut(s) 168, 1869, 2746
BstSCI CCNGG 4 cut(s) 61, 103, 201, 984
BstSFI CTRYAG 1 cut(s) 145
BstV1I GCAGC 3 cut(s) 1343, 1952, 2343
BstV2I GAAGAC 2 cut(s) 1184, 2734
BstX2I RGATCY 3 cut(s) 100, 2006, 2905
BstXI CCANNNNNNTGG 2 cut(s) 725, 2431
BstYI RGATCY 3 cut(s) 100, 2006, 2905
BstZ17I GTATAC 1 cut(s) 1337
Bsu15I ATCGAT 1 cut(s) 2427
BsuI GTATCC 1 cut(s) 2691
BsuRI GGCC 4 cut(s) 108, 318, 353, 1261
BsuTUI ATCGAT 1 cut(s) 2427
BtsIMutI CAGTG 7 cut(s) 391, 464, 601, 702, 941, 1454, 2149
BveI ACCTGC 2 cut(s) 729, 1870
Cac8I GCNNGC 4 cut(s) 157, 332, 2275, 2557
CciI TCATGA 1 cut(s) 114
CfoI GCGC 1 cut(s) 330
Cfr13I GGNCC 2 cut(s) 316, 1259
ClaI ATCGAT 1 cut(s) 2427
CseI GACGC 1 cut(s) 775
Csp6I GTAC 7 cut(s) 632, 657, 996, 1109, 1901, 2022, 2647
CspCI CAANNNNNGTGG 8 cut(s) 274, 309, 1165, 1200, 1549, 1584, 2444, 2479
CviQI GTAC 7 cut(s) 632, 657, 996, 1109, 1901, 2022, 2647
DdeI CTNAG 7 cut(s) 404, 458, 888, 1079, 1909, 2141, 2759
DpnI GATC 8 cut(s) 58, 102, 417, 2008, 2264, 2490, 2583, 2907
DpnII GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
DraI TTTAAA 1 cut(s) 1642
EaeI YGGCCR 2 cut(s) 106, 351
Eam1104I CTCTTC 4 cut(s) 762, 2198, 2384, 2920
EarI CTCTTC 4 cut(s) 762, 2198, 2384, 2920
Ecl136II GAGCTC 1 cut(s) 120
Eco130I CCWWGG 4 cut(s) 580, 903, 1275, 1567
Eco24I GRGCYC 1 cut(s) 122
Eco53kI GAGCTC 1 cut(s) 120
Eco57I CTGAAG 2 cut(s) 1199, 1218
Eco88I CYCGRG 1 cut(s) 1760
EcoICRI GAGCTC 1 cut(s) 120
EcoNI CCTNNNNNAGG 2 cut(s) 240, 907
EcoRI GAATTC 2 cut(s) 300, 970
EcoRII CCWGG 4 cut(s) 61, 103, 201, 984
EcoT14I CCWWGG 4 cut(s) 580, 903, 1275, 1567
EcoT22I ATGCAT 4 cut(s) 6, 53, 556, 2958
EcoT38I GRGCYC 1 cut(s) 122
ErhI CCWWGG 4 cut(s) 580, 903, 1275, 1567
FaqI GGGAC 1 cut(s) 1242
FblI GTMKAC 2 cut(s) 322, 1336
Fnu4HI GCNGC 4 cut(s) 737, 1357, 1966, 2357
FriOI GRGCYC 1 cut(s) 122
Fsp4HI GCNGC 4 cut(s) 737, 1357, 1966, 2357
GlaI GCGC 1 cut(s) 329
GluI GCNGC 4 cut(s) 737, 1357, 1966, 2357
GsaI CCCAGC 1 cut(s) 2502
GsuI CTGGAG 1 cut(s) 224
HaeIII GGCC 4 cut(s) 108, 318, 353, 1261
HapII CCGG 2 cut(s) 841, 873
HgaI GACGC 1 cut(s) 775
HhaI GCGC 1 cut(s) 330
Hin1I GRCGYC 1 cut(s) 786
Hin6I GCGC 1 cut(s) 328
HinP1I GCGC 1 cut(s) 328
HincII GTYRAC 4 cut(s) 477, 790, 2815, 3019
HindII GTYRAC 4 cut(s) 477, 790, 2815, 3019
HindIII AAGCTT 2 cut(s) 1211, 2557
HpaII CCGG 2 cut(s) 841, 873
HphI GGTGA 9 cut(s) 434, 578, 974, 1562, 1778, 2159, 2552, 2759, 2976
Hpy188I TCNGA 9 cut(s) 45, 56, 198, 1218, 1820, 1912, 2100, 2578, 2590
HpyCH4III ACNGT 8 cut(s) 14, 395, 468, 661, 706, 1394, 1458, 2703
HpyCH4IV ACGT 3 cut(s) 1978, 2020, 2808
HpyF10VI GCNNNNNNNGC 2 cut(s) 165, 1590
HpyF3I CTNAG 7 cut(s) 404, 458, 888, 1079, 1909, 2141, 2759
HpySE526I ACGT 3 cut(s) 1978, 2020, 2808
Hsp92I GRCGYC 1 cut(s) 786
HspAI GCGC 1 cut(s) 328
Kzo9I GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
LmnI GCTCC 4 cut(s) 885, 2195, 2657, 3069
Lsp1109I GCAGC 3 cut(s) 1343, 1952, 2343
LweI GCATC 7 cut(s) 60, 1128, 1851, 2024, 2207, 2368, 2582
MaeII ACGT 3 cut(s) 1978, 2020, 2808
MaeIII GTNAC 9 cut(s) 160, 422, 706, 962, 1280, 1388, 1851, 2540, 3055
MalI GATC 8 cut(s) 58, 102, 417, 2008, 2264, 2490, 2583, 2907
MboI GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
MfeI CAATTG 2 cut(s) 1573, 2607
MflI RGATCY 3 cut(s) 100, 2006, 2905
MhlI GDGCHC 3 cut(s) 12, 122, 414
MlsI TGGCCA 2 cut(s) 108, 353
MluNI TGGCCA 2 cut(s) 108, 353
MlyI GAGTC 6 cut(s) 195, 472, 831, 2342, 2973, 3050
MmeI TCCRAC 3 cut(s) 201, 401, 738
Mox20I TGGCCA 2 cut(s) 108, 353
Mph1103I ATGCAT 4 cut(s) 6, 53, 556, 2958
MroXI GAANNNNTTC 5 cut(s) 538, 1066, 1593, 2064, 2207
MscI TGGCCA 2 cut(s) 108, 353
MseI TTAA 9 cut(s) 1245, 1641, 1649, 1731, 1946, 2169, 2177, 2231, 2259
MslI CAYNNNNRTG 3 cut(s) 723, 2429, 2538
Msp20I TGGCCA 2 cut(s) 108, 353
MspCI CTTAAG 2 cut(s) 1730, 2258
MspI CCGG 2 cut(s) 841, 873
MspR9I CCNGG 4 cut(s) 63, 105, 203, 986
MunI CAATTG 2 cut(s) 1573, 2607
Mva1269I GAATGC 2 cut(s) 2225, 2763
MvaI CCWGG 4 cut(s) 63, 105, 203, 986
MwoI GCNNNNNNNGC 2 cut(s) 165, 1590
NdeII GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
NlaIV GGNNCC 6 cut(s) 901, 1701, 2246, 2623, 2659, 2907
NmuCI GTSAC 4 cut(s) 422, 706, 962, 2540
NsiI ATGCAT 4 cut(s) 6, 53, 556, 2958
NspI RCATGY 3 cut(s) 168, 1869, 2746
PaeR7I CTCGAG 1 cut(s) 1760
PagI TCATGA 1 cut(s) 114
PaqCI CACCTGC 1 cut(s) 729
PciI ACATGT 1 cut(s) 2742
PcsI WCGNNNNNNNCGW 1 cut(s) 636
PctI GAATGC 2 cut(s) 2225, 2763
PdmI GAANNNNTTC 5 cut(s) 538, 1066, 1593, 2064, 2207
PfeI GAWTC 8 cut(s) 21, 627, 1052, 1240, 1430, 1555, 1735, 2593
PflFI GACNNNGTC 2 cut(s) 1456, 2915
PflMI CCANNNNNTGG 3 cut(s) 746, 1349, 2803
PkrI GCNGC 4 cut(s) 738, 1358, 1967, 2358
PleI GAGTC 6 cut(s) 194, 472, 831, 2342, 2972, 3049
PpsI GAGTC 6 cut(s) 194, 472, 831, 2342, 2972, 3049
Ppu21I YACGTR 1 cut(s) 2021
PscI ACATGT 1 cut(s) 2742
PshBI ATTAAT 1 cut(s) 1946
PsiI TTATAA 1 cut(s) 1752
Psp124BI GAGCTC 1 cut(s) 122
Psp6I CCWGG 4 cut(s) 61, 103, 201, 984
PspFI CCCAGC 1 cut(s) 2498
PspGI CCWGG 4 cut(s) 61, 103, 201, 984
PspN4I GGNNCC 6 cut(s) 901, 1701, 2246, 2623, 2659, 2907
PspPI GGNCC 2 cut(s) 316, 1259
PstI CTGCAG 1 cut(s) 149
PsuI RGATCY 3 cut(s) 100, 2006, 2905
PsyI GACNNNGTC 2 cut(s) 1456, 2915
RsaI GTAC 7 cut(s) 633, 658, 997, 1110, 1902, 2023, 2648
RsaNI GTAC 7 cut(s) 632, 657, 996, 1109, 1901, 2022, 2647
RseI CAYNNNNRTG 3 cut(s) 723, 2429, 2538
SacI GAGCTC 1 cut(s) 122
SaqAI TTAA 9 cut(s) 1245, 1641, 1649, 1731, 1946, 2169, 2177, 2231, 2259
SatI GCNGC 4 cut(s) 737, 1357, 1966, 2357
Sau3AI GATC 8 cut(s) 56, 100, 415, 2006, 2262, 2488, 2581, 2905
Sau96I GGNCC 2 cut(s) 316, 1259
ScaI AGTACT 1 cut(s) 1902
SchI GAGTC 6 cut(s) 195, 472, 831, 2342, 2973, 3050
ScrFI CCNGG 4 cut(s) 63, 105, 203, 986
SduI GDGCHC 3 cut(s) 12, 122, 414
SfaNI GCATC 7 cut(s) 60, 1128, 1851, 2024, 2207, 2368, 2582
SfcI CTRYAG 1 cut(s) 145
Sfr274I CTCGAG 1 cut(s) 1760
SlaI CTCGAG 1 cut(s) 1760
SmiMI CAYNNNNRTG 3 cut(s) 723, 2429, 2538
SmlI CTYRAG 9 cut(s) 210, 306, 1004, 1730, 1760, 2258, 2278, 2382, 2640
SmoI CTYRAG 9 cut(s) 210, 306, 1004, 1730, 1760, 2258, 2278, 2382, 2640
SsiI CCGC 5 cut(s) 33, 737, 1340, 1427, 2248
SspI AATATT 2 cut(s) 682, 2419
SstI GAGCTC 1 cut(s) 122
StyD4I CCNGG 4 cut(s) 61, 103, 201, 984
StyI CCWWGG 4 cut(s) 580, 903, 1275, 1567
TaaI ACNGT 8 cut(s) 14, 395, 468, 661, 706, 1394, 1458, 2703
TaiI ACGT 3 cut(s) 1981, 2023, 2811
TaqI TCGA 8 cut(s) 184, 414, 768, 1070, 1761, 2201, 2322, 2427
TatI WGTACW 3 cut(s) 995, 1900, 2646
TauI GCSGC 1 cut(s) 739
TfiI GAWTC 8 cut(s) 21, 627, 1052, 1240, 1430, 1555, 1735, 2593
Tru1I TTAA 9 cut(s) 1245, 1641, 1649, 1731, 1946, 2169, 2177, 2231, 2259
Tru9I TTAA 9 cut(s) 1245, 1641, 1649, 1731, 1946, 2169, 2177, 2231, 2259
TscAI CASTG 7 cut(s) 398, 471, 601, 709, 948, 1461, 2149
TseFI GTSAC 4 cut(s) 422, 706, 962, 2540
TseI GCWGC 3 cut(s) 1356, 1965, 2356
Tsp45I GTSAC 4 cut(s) 422, 706, 962, 2540
TspGWI ACGGA 3 cut(s) 1128, 1999, 3010
TspRI CASTG 7 cut(s) 398, 471, 601, 709, 948, 1461, 2149
Tth111I GACNNNGTC 2 cut(s) 1456, 2915
Van91I CCANNNNNTGG 3 cut(s) 746, 1349, 2803
Vha464I CTTAAG 2 cut(s) 1730, 2258
VspI ATTAAT 1 cut(s) 1946
XagI CCTNNNNNAGG 2 cut(s) 240, 907
XapI RAATTY 9 cut(s) 287, 300, 794, 970, 1102, 1250, 1613, 1706, 1938
XbaI TCTAGA 2 cut(s) 833, 2344
XceI RCATGY 3 cut(s) 168, 1869, 2746
XhoI CTCGAG 1 cut(s) 1760
XmiI GTMKAC 2 cut(s) 322, 1336
XmnI GAANNNNTTC 5 cut(s) 538, 1066, 1593, 2064, 2207
ZrmI AGTACT 1 cut(s) 1902
Zsp2I ATGCAT 4 cut(s) 6, 53, 556, 2958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.