Prupe.6G274800_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000262
Physical Location & Seq
Forward (+)
25923515 .. 25927349
3835 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G274800.1

Sequence Viewer

Length: 3198 bp
ATGGAAATAGAGTTCTCATGCAAGACTGCATTCAACAAAATCACAATAAAAAATTACATGCAAACCTGTATTTTCAACAAGATGAGGCAGATCTATTTTAAATTCCTTCACGGGTTCTTTCTCTTGTGCATGAGCTCGAGCACCTTTGGAGATGAATCTGATCACCTGGCTCTGCTAGACTTGAAGAAAAGAATAACTGAAGATCCTCTGCGTATCATGAGCACATGGAATAGTTCCATCAATTTTTGCAGCTGGGTTGGCGTTACATGCAACCATTCCAACAAAAGAGTCGTGATTTTGAACCTGGAAGCTCAAAAATTGGCAGGCTCCCTACCACCTTCTATAGGAAATCTTACTTATCTCACTGGAATTAACTTGATAGACAACAACTTTCATGGTGAAATTCCTCAAGAAATGGGACGTCTACTGCGCCTGCAATATCTCAACCTGACTTCCAATTCCTTCGGTGGGAAAATCCCAAGTAACATATCTCACTGTACACAGCTGAGAGTGCTTGATGTTGGTTCCAATAAGCTTATTGGGTCCCTTCCGGATCAACTCAGTTCATTGTTGAATTTAACTCATCTATGGGTTGATGAAAACAATCTCACTGGAACTTTCCCAGATTGGATAGGAAACTTTTCTTCTTTGTATGCTATTTCTCTTGCCCACAACAATTTTCAAGGAAACATACCGAATGAGCTCGGGCGCTTAACAAGGTTGGGAAGATTTGTAATTCCAGGGAACAAATTTTCTGGTATGGTTCCTTCTTCAATCTATAATATATCCTCCATATACTATATCACTGTTACTGACAACCAGCTGCATGGAGAGCTGCCAAAAGATGTGGGGATCACTCTTCCTTATCTCGAGATATTTGCTGGTGGTGTCAACAAATTCACAGGTAGTATTCCTGTATCCTTGTCAAATGCTTCTAGACTTCGAAAGCTTGATTTTGCTGAAAATGGTCTCACTGGGAAACTCCCAGCTGAAAATTTTGGAAGCTTGCAAAGCTTATCTAGACTGAACTTTGATGACAATAGACTGGGAAGTGGAAAAACTGGTGACCTGAGTTCTCTCAGTTTCCTTGCTAATTGTACTAATCTTGAGGTGTTGAGTTTTAGCCGCAATCGTCTTGGAGGAGAATTGCCAGAGTCCATATCCAACCTCTCAACAAAAATTAGAATTTTTACAATGGGGGGTAATTTAATACAGGGAAGCATTCCTATCGGCATTGCAAATCTTGTAAACTTGACCAATCTAGGAATGGAACAAAACTACTTTGGTGGCAGTCTCCCTGATGCAATTGGCAAGCTTCAGAAGTTACAGGGACTGTATCTGTATCTTAACAAGTTTTCTGGGCCAATCCCATCCTCCCTAGGTAACTTGACTTCAGTAACAACGCTCTTAATGGAGGGTAATAGGTTTGAGGGAAGTATACCTCCAAGCCTGGGAAACTGCCAAAGCTTATTGATACTTAACCTTTCTAGTAACCAACTAAGTGGCACCATACCTAAAGAGGTTGTTGGGATTTCATCCCTTTCAATTTCTTTGTCCATGTCCAACAATTCTTTGACTGGTCCACTACCATCAGAAGTGGGTGAGTTGGTAAATCTCTCGGAGCTAGATGTATCAGGAAACAACTTATCAGGTGAAATCCCCATAACCCTTGGCAGCTGCACTAGTTTGGTGAGCCTGCATTTGGAAGGTAATGAATTTGAAGGAAATATTCCTGAAACTCTGACAAAATTAAGAGGCGTGGAAGAAATAGATATTTCACGCAATCACTTATCTGGGAAAATTCCTGAATTTCTAGGTAAGTTTAGAGCTCTTAAGCAACTGAATCTTTCTTATAATGATTTTGAGAGTGCATTGCCTGAAGAAGGAATATTTTCAAATGCAAGTGGTGTCTCAGTTCATGGAAATAATAAACTGTGTGGTGGCATCCCAGAATTACTTCTACCTGTATGCTCTAACAAAAAGCCTCATTCATCTCAAGGATTACTTTCCCCAAAAGTAGTAATTCCTGTAACTTTTGCAATTGCATTCATTGCCCTATCATGCTTTATTGCTGCTTGTAGAATGGTGAAAAGGTCAAGAGGTCCACTTTTAACTTCACATTCTTATGGGGATTGGAAATTAGCTGTCTCTTACTTAGAACTCGCTCAATCAACCAACGGGTTCTCTCTTGACAATATCATTGGTTCAGGAAGTTTCGGTTCTGTGTACAGAGGAGTACTCTCTAGTAATGGCATGGTAGTTGCTGTTAAGGTATTAAACCTTAACCAAGAAGGAGCTTCCAAGAGTTTCATTGATGAATGCAAAGCTTTAAGAAGTATAAGGCACCGCAATCTTCTCAAGATCATAACCGCATGCTCAAGCATTGACAACCAAGGTAATGAGTTCAAAAGTCTAGTTTCTGAGTTCATGGAAAATGGAAGTCTAGACCAGTGGCTGCATCCAAGAGATGATGAACAATCTCAAAGTAAGAGATTGAGCCTGATCCAAAGACTAAATGTTGCCATAGATGTTGCTTCTGCATTAGATTATCTACACCACAATTGTGAAACATGCATTGTTCATTGTGACTTAAAGCCAAGCAACGTTCTTCTTGATGAAGATATGGTAGCCCATGTTGGTGACTTTGGTCTAGCAAGGTTCCTTTTGGAAGCATCAAATAATCCCACCAAAACTCAAACCATGTCAGTTGGGCTAAAGGGTTCCATAGGCTATATTGCTCCAGAGTATGGCATGGGAGGCCAAGTTTCCACACTTGGAGATGTTTATAGCTATGGGATACTGTTGCTAGAAATGTTCACAGGAAAAAGACCAACTGATGACATGTTCAAAGATGGTCTAAGCATTCACCAATTCACAGCCATGGCTTGTCCTGACCATGTCATGGACATAGTTGAGCCTTCATTGCTCCTTGAAACGGATGACGAGAATGATGAAGATGACAAATATGGAAATCGCATAGAAGAAAGACCAGTAGCAGGATATAAAGATCCTGGCCCAGTCAAAGCAAAAAGATTGGAGGAATGCTTGGATTCATTGATGCAAATAGGACTCTCATGCTCTGCAACATCACCAAGAGACCGGATGTCTATGGATGTCGTTGTCAACAAAATGAATGCAATTAGAGCCTCATATCTCAATATAAGAAGAAGAAGAAGAAGATTGAAAAGTACAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1066

Amino Acids

116.61

Weight (kDa)

6.35

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000262)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11680 FvH4_6g11681 FvH4_6g11682 FvH4_6g11683
malus_domestica MD00G1079100.v1.1 MD00G1080000.v1.1 MD01G1100900.v1.1 MD03G1225200.v1.1 MD04G1041600.v1.1 MD04G1110500.v1.1 MD04G1118700.v1.1 MD04G1150300.v1.1 MD04G1150400.v1.1 MD04G1156000.v1.1 MD04G1156200.v1.1 MD04G1156700.v1.1 MD04G1157400.v1.1 MD04G1157500.v1.1 MD04G1157700.v1.1 MD04G1158000.v1.1 MD04G1158200.v1.1 MD04G1158600.v1.1 MD04G1159000.v1.1 MD04G1159100.v1.1 MD05G1061600.v1.1 MD05G1075800.v1.1 MD06G1129300.v1.1 MD07G1217800.v1.1 MD07G1218000.v1.1 MD07G1308700.v1.1 MD12G1130700.v1.1 MD12G1130800.v1.1 MD12G1134500.v1.1 MD12G1134700.v1.1 MD12G1135000.v1.1 MD12G1135200.v1.1 MD12G1135800.v1.1 MD12G1164300.v1.1 MD12G1164400.v1.1 MD12G1169100.v1.1 MD12G1169700.v1.1 MD12G1170200.v1.1 MD12G1170400.v1.1 MD13G1275300.v1.1
prunus_persica Prupe.1G072900_v2.0.a1 Prupe.1G194200_v2.0.a1 Prupe.1G201100_v2.0.a1 Prupe.6G248000_v2.0.a1 Prupe.6G248100_v2.0.a1 Prupe.6G248500_v2.0.a1 Prupe.6G274800_v2.0.a1 Prupe.6G274900_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.6G275100_v2.0.a1 Prupe.7G044200_v2.0.a1 Prupe.7G044300_v2.0.a1 Prupe.7G044700_v2.0.a1
pyrus_communis pycom04g03530 pycom04g10490 pycom04g10500 pycom04g10510 pycom04g10560 pycom04g13580 pycom04g13600 pycom04g14080 pycom12g10580 pycom12g11020 pycom12g12650 pycom12g12680 pycom12g15730 pycom12g15740 pycom12g16060 pycom12g16100 pycom12g16200 pycom12g16240 pycom16g21060
rosa_chinensis RchiOBHm_Chr3g0463401 RchiOBHm_Chr3g0463411 RchiOBHm_Chr3g0463481 RchiOBHm_Chr4g0408571 RchiOBHm_Chr4g0408641
rosa_laevigata RLG00000019546 RLG00000019547 RLG00000019552 RLG00000019553 RLG00000019554 RLG00000019578 RLG00000024784 RLG00000024785 RLG00000024786
rosa_multiflora Rmu_sc0000923.1_g000013 Rmu_sc0000923.1_g000017 Rmu_sc0000923.1_g000018 Rmu_sc0001053.1_g000005 Rmu_sc0001053.1_g000012 Rmu_sc0001053.1_g000013 Rmu_sc0001053.1_g000014 Rmu_sc0031971.1_g000001
rosa_roxburghii Rroxscaffold_2G00107980 Rroxscaffold_6G00416540 Rroxscaffold_6G00416560
rosa_rugosa Rorug02G0333800 Rorug02G0333900 Rorug03G0064500 Rorug03G0064600 Rorug03G0064800 Rorug03G0064900 Rorug03G0065000 Rorug03G0065000
rosa_samantha Rh2CG370900 Rh3AG122100 Rh3BG126500 Rh3BG126800 Rh3BG126900 Rh3CG128600 Rh3CG128700 Rh3DG127400 Rh3DG127500 Rh3DG127700 Rh4CG158500 Rh4CG158600
rosa_wichuraiana Rw0G010610 Rw0G010620 Rw3G010370 Rw3G010380 Rw3G010400 Rw3G010410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1854
AatII GACGTC 1 cut(s) 424
AccB1I GGYRCC 2 cut(s) 1505, 2343
AccB7I CCANNNNNTGG 2 cut(s) 2747, 2902
AccI GTMKAC 2 cut(s) 424, 1438
AccIII TCCGGA 1 cut(s) 550
AciI CCGC 3 cut(s) 1126, 2347, 2370
AclI AACGTT 1 cut(s) 2604
AclWI GGATC 5 cut(s) 197, 561, 860, 2497, 3002
AcuI CTGAAG 4 cut(s) 219, 1301, 1377, 1899
AcyI GRCGYC 1 cut(s) 421
AfaI GTAC 5 cut(s) 499, 1099, 2228, 2238, 3190
AfiI CCNNNNNNNGG 9 cut(s) 344, 468, 1451, 1702, 1883, 2747, 2902, 2935, 2996
AflII CTTAAG 1 cut(s) 1832
AflIII ACRYGT 1 cut(s) 2841
AhdI GACNNNNNGTC 1 cut(s) 3103
AhlI ACTAGT 1 cut(s) 1682
AjnI CCWGG 5 cut(s) 165, 303, 739, 1449, 3010
AleI CACNNNNGTG 1 cut(s) 2562
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 5 cut(s) 137, 143, 224, 705, 1831
Alw26I GTCTC 5 cut(s) 974, 1298, 1915, 2152, 3090
AlwI GGATC 5 cut(s) 197, 561, 860, 2497, 3002
AlwNI CAGNNNCTG 2 cut(s) 1333, 2455
Ama87I CYCGRG 3 cut(s) 136, 704, 869
Aor13HI TCCGGA 1 cut(s) 550
AoxI GGCC 3 cut(s) 1361, 2758, 3013
ApeKI GCWGC 7 cut(s) 249, 823, 835, 1674, 1677, 2072, 2455
Asp700I GAANNNNTTC 3 cut(s) 640, 1891, 1956
AspA2I CCTAGG 1 cut(s) 1378
AspLEI GCGC 2 cut(s) 432, 711
AspS9I GGNCC 5 cut(s) 543, 1361, 1580, 2102, 3014
AsuII TTCGAA 1 cut(s) 943
AvaI CYCGRG 3 cut(s) 136, 704, 869
AvaII GGWCC 3 cut(s) 543, 1580, 2102
AvrII CCTAGG 1 cut(s) 1378
BanI GGYRCC 2 cut(s) 1505, 2343
BanII GRGCYC 3 cut(s) 137, 705, 1831
BarI GAAGNNNNNNTAC 4 cut(s) 751, 783, 1375, 1407
Bbv12I GWGCWC 5 cut(s) 137, 143, 224, 705, 1831
BbvI GCAGC 7 cut(s) 261, 810, 822, 1664, 1686, 2059, 2442
BccI CCATC 4 cut(s) 245, 1378, 1597, 2846
BcgI CGANNNNNNTGC 4 cut(s) 860, 894, 1210, 1244
BciT130I CCWGG 5 cut(s) 167, 305, 741, 1451, 3012
BciVI GTATCC 2 cut(s) 928, 2790
BclI TGATCA 1 cut(s) 160
BcoDI GTCTC 5 cut(s) 974, 1298, 1915, 2152, 3090
BcuI ACTAGT 1 cut(s) 1682
BfmI CTRYAG 1 cut(s) 342
BfoI RGCGCY 1 cut(s) 712
BfrI CTTAAG 1 cut(s) 1832
BfuI GTATCC 2 cut(s) 928, 2790
BglII AGATCT 1 cut(s) 90
BisI GCNGC 8 cut(s) 250, 824, 836, 1126, 1675, 1678, 2073, 2456
BlnI CCTAGG 1 cut(s) 1378
BlsI GCNGC 8 cut(s) 251, 825, 837, 1127, 1676, 1679, 2074, 2457
BmcAI AGTACT 1 cut(s) 2238
Bme1390I CCNGG 5 cut(s) 167, 305, 741, 1451, 3012
Bme18I GGWCC 3 cut(s) 543, 1580, 2102
BmeRI GACNNNNNGTC 1 cut(s) 3103
BmeT110I CYCGRG 3 cut(s) 136, 704, 869
BmgT120I GGNCC 5 cut(s) 543, 1361, 1580, 2102, 3014
BmiI GGNNCC 9 cut(s) 328, 526, 544, 545, 765, 1507, 2345, 2660, 2722
BmrFI CCNGG 5 cut(s) 167, 305, 741, 1451, 3012
BmrI ACTGGG 3 cut(s) 984, 1055, 3011
BmsI GCATC 5 cut(s) 1291, 1953, 2467, 2681, 3048
BmuI ACTGGG 3 cut(s) 984, 1055, 3011
BoxI GACNNNNGTC 1 cut(s) 2646
BplI GAGNNNNNCTC 2 cut(s) 2223, 2255
BpmI CTGGAG 1 cut(s) 2724
Bpu14I TTCGAA 1 cut(s) 943
BpuEI CTTGAG 5 cut(s) 393, 1127, 1980, 2342, 2362
BsaHI GRCGYC 1 cut(s) 421
BsaI GGTCTC 2 cut(s) 974, 3090
BsaJI CCNNGG 6 cut(s) 740, 1378, 1450, 1669, 2392, 2880
BsaWI WCCGGW 2 cut(s) 550, 3099
BsaXI ACNNNNNCTCC 2 cut(s) 2748, 2778
Bsc4I CCNNNNNNNGG 9 cut(s) 344, 468, 1451, 1702, 1883, 2747, 2902, 2935, 2996
Bse1I ACTGG 9 cut(s) 370, 616, 979, 1050, 1066, 1582, 2449, 2990, 3017
Bse3DI GCAATG 4 cut(s) 1233, 1871, 2049, 2921
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 5 cut(s) 167, 305, 741, 1451, 3012
BseDI CCNNGG 6 cut(s) 740, 1378, 1450, 1669, 2392, 2880
BseGI GGATG 7 cut(s) 1370, 1535, 1944, 2458, 2944, 3108, 3118
BseLI CCNNNNNNNGG 9 cut(s) 344, 468, 1451, 1702, 1883, 2747, 2902, 2935, 2996
BseMI GCAATG 4 cut(s) 1233, 1871, 2049, 2921
BseMII CTCAG 6 cut(s) 497, 574, 1061, 1093, 1926, 2412
BseNI ACTGG 9 cut(s) 370, 616, 979, 1050, 1066, 1582, 2449, 2990, 3017
BseRI GAGGAG 2 cut(s) 1155, 2247
BseXI GCAGC 7 cut(s) 261, 810, 822, 1664, 1686, 2059, 2442
BseYI CCCAGC 2 cut(s) 252, 985
BsgI GTGCAG 1 cut(s) 1663
BshFI GGCC 3 cut(s) 1363, 2760, 3015
BshNI GGYRCC 2 cut(s) 1505, 2343
BsiHKAI GWGCWC 5 cut(s) 137, 143, 224, 705, 1831
BsiHKCI CYCGRG 3 cut(s) 136, 704, 869
BsiSI CCGG 2 cut(s) 551, 3100
BslFI GGGAC 3 cut(s) 432, 529, 1344
BslI CCNNNNNNNGG 9 cut(s) 344, 468, 1451, 1702, 1883, 2747, 2902, 2935, 2996
BsmAI GTCTC 5 cut(s) 974, 1298, 1915, 2152, 3090
BsmFI GGGAC 3 cut(s) 432, 529, 1344
BsmI GAATGC 7 cut(s) 29, 1221, 2045, 2324, 2862, 3047, 3139
BsnI GGCC 3 cut(s) 1363, 2760, 3015
Bso31I GGTCTC 2 cut(s) 974, 3090
BsoBI CYCGRG 3 cut(s) 136, 704, 869
Bsp119I TTCGAA 1 cut(s) 943
Bsp1286I GDGCHC 5 cut(s) 137, 143, 224, 705, 1831
Bsp13I TCCGGA 1 cut(s) 550
Bsp1407I TGTACA 2 cut(s) 497, 2226
Bsp143I GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
Bsp19I CCATGG 1 cut(s) 2880
BspACI CCGC 3 cut(s) 1126, 2347, 2370
BspANI GGCC 3 cut(s) 1363, 2760, 3015
BspCNI CTCAG 6 cut(s) 498, 573, 1062, 1092, 1925, 2413
BspEI TCCGGA 1 cut(s) 550
BspHI TCATGA 1 cut(s) 216
BspLI GGNNCC 9 cut(s) 328, 526, 544, 545, 765, 1507, 2345, 2660, 2722
BspPI GGATC 5 cut(s) 197, 561, 860, 2497, 3002
BspT104I TTCGAA 1 cut(s) 943
BspT107I GGYRCC 2 cut(s) 1505, 2343
BspTI CTTAAG 1 cut(s) 1832
BspTNI GGTCTC 2 cut(s) 974, 3090
BsrDI GCAATG 4 cut(s) 1233, 1871, 2049, 2921
BsrGI TGTACA 2 cut(s) 497, 2226
BsrI ACTGG 9 cut(s) 370, 616, 979, 1050, 1066, 1582, 2449, 2990, 3017
BssECI CCNNGG 6 cut(s) 740, 1378, 1450, 1669, 2392, 2880
BssMI GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
BssNAI GTATAC 1 cut(s) 1439
BssNI GRCGYC 1 cut(s) 421
BssT1I CCWWGG 4 cut(s) 1378, 1669, 2392, 2880
Bst1107I GTATAC 1 cut(s) 1439
Bst2UI CCWGG 5 cut(s) 167, 305, 741, 1451, 3012
Bst4CI ACNGT 5 cut(s) 497, 808, 1335, 1935, 2802
Bst6I CTCTTC 1 cut(s) 864
BstACI GRCGYC 1 cut(s) 421
BstAFI CTTAAG 1 cut(s) 1832
BstAPI GCANNNNNTGC 1 cut(s) 2051
BstAUI TGTACA 2 cut(s) 497, 2226
BstBI TTCGAA 1 cut(s) 943
BstC8I GCNNGC 6 cut(s) 325, 434, 1007, 1313, 1697, 2374
BstDEI CTNAG 9 cut(s) 506, 560, 1070, 1079, 1499, 1912, 2155, 2421, 2858
BstDSI CCRYGG 1 cut(s) 2880
BstEII GGTNACC 1 cut(s) 1064
BstENI CCTNNNNNAGG 2 cut(s) 342, 1881
BstF5I GGATG 7 cut(s) 1370, 1535, 1944, 2458, 2944, 3108, 3118
BstH2I RGCGCY 1 cut(s) 712
BstHHI GCGC 2 cut(s) 432, 711
BstKTI GATC 8 cut(s) 93, 163, 205, 556, 855, 2364, 2505, 3010
BstMAI GTCTC 5 cut(s) 974, 1298, 1915, 2152, 3090
BstMBI GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
BstMWI GCNNNNNNNGC 9 cut(s) 258, 267, 511, 832, 1011, 2051, 2757, 2923, 3143
BstNI CCWGG 5 cut(s) 167, 305, 741, 1451, 3012
BstNSI RCATGY 5 cut(s) 61, 270, 2376, 2574, 2845
BstPAI GACNNNNGTC 1 cut(s) 2646
BstPI GGTNACC 1 cut(s) 1064
BstSCI CCNGG 5 cut(s) 165, 303, 739, 1449, 3010
BstSFI CTRYAG 1 cut(s) 342
BstV1I GCAGC 7 cut(s) 261, 810, 822, 1664, 1686, 2059, 2442
BstX2I RGATCY 3 cut(s) 90, 202, 3007
BstXI CCANNNNNNTGG 2 cut(s) 827, 1502
BstYI RGATCY 3 cut(s) 90, 202, 3007
BstZ17I GTATAC 1 cut(s) 1439
BsuI GTATCC 2 cut(s) 928, 2790
BsuRI GGCC 3 cut(s) 1363, 2760, 3015
BtgI CCRYGG 1 cut(s) 2880
BtsCI GGATG 7 cut(s) 1370, 1535, 1944, 2458, 2944, 3108, 3118
BtsIMutI CAGTG 6 cut(s) 363, 493, 609, 804, 972, 2456
Cac8I GCNNGC 6 cut(s) 325, 434, 1007, 1313, 1697, 2374
CaiI CAGNNNCTG 2 cut(s) 1333, 2455
CciI TCATGA 1 cut(s) 216
CfoI GCGC 2 cut(s) 432, 711
Cfr13I GGNCC 5 cut(s) 543, 1361, 1580, 2102, 3014
Csp6I GTAC 5 cut(s) 498, 1098, 2227, 2237, 3189
CspCI CAANNNNNGTGG 2 cut(s) 828, 863
CviQI GTAC 5 cut(s) 498, 1098, 2227, 2237, 3189
DdeI CTNAG 9 cut(s) 506, 560, 1070, 1079, 1499, 1912, 2155, 2421, 2858
DpnI GATC 8 cut(s) 92, 162, 204, 555, 854, 2363, 2504, 3009
DpnII GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
DraI TTTAAA 1 cut(s) 100
DriI GACNNNNNGTC 1 cut(s) 3103
Eam1104I CTCTTC 1 cut(s) 864
Eam1105I GACNNNNNGTC 1 cut(s) 3103
EarI CTCTTC 1 cut(s) 864
Ecl136II GAGCTC 3 cut(s) 135, 703, 1829
Eco130I CCWWGG 4 cut(s) 1378, 1669, 2392, 2880
Eco24I GRGCYC 3 cut(s) 137, 705, 1831
Eco31I GGTCTC 2 cut(s) 974, 3090
Eco47I GGWCC 3 cut(s) 543, 1580, 2102
Eco53kI GAGCTC 3 cut(s) 135, 703, 1829
Eco57I CTGAAG 4 cut(s) 219, 1301, 1377, 1899
Eco88I CYCGRG 3 cut(s) 136, 704, 869
Eco91I GGTNACC 1 cut(s) 1064
EcoICRI GAGCTC 3 cut(s) 135, 703, 1829
EcoNI CCTNNNNNAGG 2 cut(s) 342, 1881
EcoO109I RGGNCCY 1 cut(s) 543
EcoO65I GGTNACC 1 cut(s) 1064
EcoRII CCWGG 5 cut(s) 165, 303, 739, 1449, 3010
EcoT14I CCWWGG 4 cut(s) 1378, 1669, 2392, 2880
EcoT22I ATGCAT 1 cut(s) 2576
EcoT38I GRGCYC 3 cut(s) 137, 705, 1831
ErhI CCWWGG 4 cut(s) 1378, 1669, 2392, 2880
FalI AAGNNNNNCTT 2 cut(s) 1989, 2021
FaqI GGGAC 3 cut(s) 432, 529, 1344
FbaI TGATCA 1 cut(s) 160
FblI GTMKAC 2 cut(s) 424, 1438
Fnu4HI GCNGC 8 cut(s) 250, 824, 836, 1126, 1675, 1678, 2073, 2456
FokI GGATG 7 cut(s) 1357, 1522, 1931, 2445, 2951, 3115, 3125
FriOI GRGCYC 3 cut(s) 137, 705, 1831
Fsp4HI GCNGC 8 cut(s) 250, 824, 836, 1126, 1675, 1678, 2073, 2456
GlaI GCGC 2 cut(s) 431, 710
GluI GCNGC 8 cut(s) 250, 824, 836, 1126, 1675, 1678, 2073, 2456
GsaI CCCAGC 2 cut(s) 256, 989
GsuI CTGGAG 1 cut(s) 2724
HaeII RGCGCY 1 cut(s) 712
HaeIII GGCC 3 cut(s) 1363, 2760, 3015
HapII CCGG 2 cut(s) 551, 3100
HhaI GCGC 2 cut(s) 432, 711
Hin1I GRCGYC 1 cut(s) 421
Hin6I GCGC 2 cut(s) 430, 709
HinP1I GCGC 2 cut(s) 430, 709
HincII GTYRAC 2 cut(s) 892, 3124
HindII GTYRAC 2 cut(s) 892, 3124
HindIII AAGCTT 7 cut(s) 533, 947, 1003, 1012, 1313, 1465, 2325
HinfI GANTC 6 cut(s) 155, 288, 1154, 1843, 3050, 3069
HpaII CCGG 2 cut(s) 551, 3100
Hpy188I TCNGA 6 cut(s) 160, 1320, 1594, 1621, 1743, 2422
HpyCH4III ACNGT 5 cut(s) 497, 808, 1335, 1935, 2802
HpyCH4IV ACGT 2 cut(s) 421, 2604
HpyF10VI GCNNNNNNNGC 9 cut(s) 258, 267, 511, 832, 1011, 2051, 2757, 2923, 3143
HpyF3I CTNAG 9 cut(s) 506, 560, 1070, 1079, 1499, 1912, 2155, 2421, 2858
HpySE526I ACGT 2 cut(s) 421, 2604
Hsp92I GRCGYC 1 cut(s) 421
HspAI GCGC 2 cut(s) 430, 709
KflI GGGWCCC 1 cut(s) 543
Kpn2I TCCGGA 1 cut(s) 550
Ksp22I TGATCA 1 cut(s) 160
Kzo9I GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
LmnI GCTCC 5 cut(s) 332, 1621, 2294, 2743, 2931
Lsp1109I GCAGC 7 cut(s) 261, 810, 822, 1664, 1686, 2059, 2442
LweI GCATC 5 cut(s) 1291, 1953, 2467, 2681, 3048
MaeII ACGT 2 cut(s) 421, 2604
MalI GATC 8 cut(s) 92, 162, 204, 555, 854, 2363, 2504, 3009
MboI GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
MfeI CAATTG 3 cut(s) 1305, 2040, 2560
MflI RGATCY 3 cut(s) 90, 202, 3007
MhlI GDGCHC 5 cut(s) 137, 143, 224, 705, 1831
MlyI GAGTC 3 cut(s) 297, 1163, 3063
MmeI TCCRAC 3 cut(s) 303, 1188, 1587
Mph1103I ATGCAT 1 cut(s) 2576
MroI TCCGGA 1 cut(s) 550
MroXI GAANNNNTTC 3 cut(s) 640, 1891, 1956
MslI CAYNNNNRTG 4 cut(s) 2124, 2562, 2637, 2879
MspA1I CMGCKG 5 cut(s) 252, 505, 823, 989, 1677
MspCI CTTAAG 1 cut(s) 1832
MspI CCGG 2 cut(s) 551, 3100
MspR9I CCNGG 5 cut(s) 167, 305, 741, 1451, 3012
MunI CAATTG 3 cut(s) 1305, 2040, 2560
Mva1269I GAATGC 7 cut(s) 29, 1221, 2045, 2324, 2862, 3047, 3139
MvaI CCWGG 5 cut(s) 167, 305, 741, 1451, 3012
MwoI GCNNNNNNNGC 9 cut(s) 258, 267, 511, 832, 1011, 2051, 2757, 2923, 3143
NcoI CCATGG 1 cut(s) 2880
NdeII GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
NlaIV GGNNCC 9 cut(s) 328, 526, 544, 545, 765, 1507, 2345, 2660, 2722
NmuCI GTSAC 3 cut(s) 1064, 2585, 2639
NsiI ATGCAT 1 cut(s) 2576
NspI RCATGY 5 cut(s) 61, 270, 2376, 2574, 2845
NspV TTCGAA 1 cut(s) 943
OliI CACNNNNGTG 1 cut(s) 2562
PaeI GCATGC 1 cut(s) 2376
PaeR7I CTCGAG 2 cut(s) 136, 869
PagI TCATGA 1 cut(s) 216
PciI ACATGT 1 cut(s) 2841
PctI GAATGC 7 cut(s) 29, 1221, 2045, 2324, 2862, 3047, 3139
PdmI GAANNNNTTC 3 cut(s) 640, 1891, 1956
PfeI GAWTC 3 cut(s) 155, 1843, 3050
PflFI GACNNNGTC 1 cut(s) 2897
PflMI CCANNNNNTGG 2 cut(s) 2747, 2902
PkrI GCNGC 8 cut(s) 251, 825, 837, 1127, 1676, 1679, 2074, 2457
PleI GAGTC 3 cut(s) 296, 1162, 3063
PpsI GAGTC 3 cut(s) 296, 1162, 3063
PpuMI RGGWCCY 1 cut(s) 543
PscI ACATGT 1 cut(s) 2841
PshAI GACNNNNGTC 1 cut(s) 2646
PsiI TTATAA 1 cut(s) 1854
Psp124BI GAGCTC 3 cut(s) 137, 705, 1831
Psp1406I AACGTT 1 cut(s) 2604
Psp5II RGGWCCY 1 cut(s) 543
Psp6I CCWGG 5 cut(s) 165, 303, 739, 1449, 3010
PspEI GGTNACC 1 cut(s) 1064
PspFI CCCAGC 2 cut(s) 252, 985
PspGI CCWGG 5 cut(s) 165, 303, 739, 1449, 3010
PspN4I GGNNCC 9 cut(s) 328, 526, 544, 545, 765, 1507, 2345, 2660, 2722
PspPI GGNCC 5 cut(s) 543, 1361, 1580, 2102, 3014
PspPPI RGGWCCY 1 cut(s) 543
PspXI VCTCGAGB 1 cut(s) 136
PstNI CAGNNNCTG 2 cut(s) 1333, 2455
PsuI RGATCY 3 cut(s) 90, 202, 3007
PsyI GACNNNGTC 1 cut(s) 2897
PvuII CAGCTG 5 cut(s) 252, 505, 823, 989, 1677
RsaI GTAC 5 cut(s) 499, 1099, 2228, 2238, 3190
RsaNI GTAC 5 cut(s) 498, 1098, 2227, 2237, 3189
RseI CAYNNNNRTG 4 cut(s) 2124, 2562, 2637, 2879
SacI GAGCTC 3 cut(s) 137, 705, 1831
SatI GCNGC 8 cut(s) 250, 824, 836, 1126, 1675, 1678, 2073, 2456
Sau3AI GATC 8 cut(s) 90, 160, 202, 553, 852, 2361, 2502, 3007
Sau96I GGNCC 5 cut(s) 543, 1361, 1580, 2102, 3014
ScaI AGTACT 1 cut(s) 2238
SchI GAGTC 3 cut(s) 297, 1163, 3063
ScrFI CCNGG 5 cut(s) 167, 305, 741, 1451, 3012
SduI GDGCHC 5 cut(s) 137, 143, 224, 705, 1831
SfaNI GCATC 5 cut(s) 1291, 1953, 2467, 2681, 3048
SfcI CTRYAG 1 cut(s) 342
Sfr274I CTCGAG 2 cut(s) 136, 869
SfuI TTCGAA 1 cut(s) 943
SinI GGWCC 3 cut(s) 543, 1580, 2102
SlaI CTCGAG 2 cut(s) 136, 869
SmiMI CAYNNNNRTG 4 cut(s) 2124, 2562, 2637, 2879
SmlI CTYRAG 8 cut(s) 136, 408, 869, 1106, 1832, 1995, 2357, 2377
SmoI CTYRAG 8 cut(s) 136, 408, 869, 1106, 1832, 1995, 2357, 2377
SpeI ACTAGT 1 cut(s) 1682
SphI GCATGC 1 cut(s) 2376
SsiI CCGC 3 cut(s) 1126, 2347, 2370
SspI AATATT 2 cut(s) 1729, 1890
SstI GAGCTC 3 cut(s) 137, 705, 1831
StyD4I CCNGG 5 cut(s) 165, 303, 739, 1449, 3010
StyI CCWWGG 4 cut(s) 1378, 1669, 2392, 2880
TaaI ACNGT 5 cut(s) 497, 808, 1335, 1935, 2802
TaiI ACGT 2 cut(s) 424, 2607
TaqI TCGA 3 cut(s) 137, 870, 943
TatI WGTACW 5 cut(s) 497, 1097, 2226, 2236, 3188
TauI GCSGC 1 cut(s) 1128
TfiI GAWTC 3 cut(s) 155, 1843, 3050
TscAI CASTG 6 cut(s) 370, 500, 616, 811, 979, 2456
TseFI GTSAC 3 cut(s) 1064, 2585, 2639
TseI GCWGC 7 cut(s) 249, 823, 835, 1674, 1677, 2072, 2455
Tsp45I GTSAC 3 cut(s) 1064, 2585, 2639
TspGWI ACGGA 1 cut(s) 2951
TspRI CASTG 6 cut(s) 370, 500, 616, 811, 979, 2456
Tth111I GACNNNGTC 1 cut(s) 2897
Van91I CCANNNNNTGG 2 cut(s) 2747, 2902
Vha464I CTTAAG 1 cut(s) 1832
VpaK11BI GGWCC 3 cut(s) 543, 1580, 2102
XagI CCTNNNNNAGG 2 cut(s) 342, 1881
XbaI TCTAGA 3 cut(s) 935, 1019, 2443
XceI RCATGY 5 cut(s) 61, 270, 2376, 2574, 2845
XcmI CCANNNNNNNNNTGG 1 cut(s) 1264
XhoI CTCGAG 2 cut(s) 136, 869
XmaJI CCTAGG 1 cut(s) 1378
XmiI GTMKAC 2 cut(s) 424, 1438
XmnI GAANNNNTTC 3 cut(s) 640, 1891, 1956
ZraI GACGTC 1 cut(s) 422
ZrmI AGTACT 1 cut(s) 2238
Zsp2I ATGCAT 1 cut(s) 2576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.