strictosidine synthase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotrans_gag | PF03732 | 156 - 248 | 7.4e-21 | Retrotransposon gag protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1051 |
| Acc36I | ACCTGC | 2 cut(s) | 113, 1051 |
| AccI | GTMKAC | 1 cut(s) | 359 |
| AccII | CGCG | 1 cut(s) | 27 |
| AciI | CCGC | 2 cut(s) | 267, 1073 |
| AclWI | GGATC | 4 cut(s) | 319, 533, 1091, 1228 |
| AcsI | RAATTY | 2 cut(s) | 436, 616 |
| AcuI | CTGAAG | 1 cut(s) | 468 |
| AfaI | GTAC | 1 cut(s) | 1115 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 449, 695, 1184 |
| AflII | CTTAAG | 2 cut(s) | 455, 1289 |
| AflIII | ACRYGT | 2 cut(s) | 945, 1110 |
| AgeI | ACCGGT | 1 cut(s) | 800 |
| AgsI | TTSAA | 8 cut(s) | 73, 110, 183, 247, 484, 722, 1214, 1266 |
| AjnI | CCWGG | 2 cut(s) | 1120, 1204 |
| AluBI | AGCT | 6 cut(s) | 233, 673, 773, 1247, 1262, 1297 |
| AluI | AGCT | 6 cut(s) | 233, 673, 773, 1247, 1262, 1297 |
| Alw26I | GTCTC | 2 cut(s) | 1278, 1372 |
| AlwI | GGATC | 4 cut(s) | 319, 533, 1091, 1228 |
| AoxI | GGCC | 1 cut(s) | 880 |
| ApeKI | GCWGC | 1 cut(s) | 1228 |
| ApoI | RAATTY | 2 cut(s) | 436, 616 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 670, 702 |
| AsiGI | ACCGGT | 1 cut(s) | 800 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 569 |
| AspS9I | GGNCC | 2 cut(s) | 379, 1199 |
| AsuC2I | CCSGG | 1 cut(s) | 306 |
| AsuHPI | GGTGA | 5 cut(s) | 162, 360, 647, 1075, 1242 |
| AvaII | GGWCC | 2 cut(s) | 379, 1199 |
| AxyI | CCTNAGG | 1 cut(s) | 987 |
| BauI | CACGAG | 2 cut(s) | 152, 745 |
| BbsI | GAAGAC | 2 cut(s) | 117, 1035 |
| BbvI | GCAGC | 1 cut(s) | 1240 |
| BccI | CCATC | 8 cut(s) | 172, 232, 289, 379, 536, 626, 699, 728 |
| BceAI | ACGGC | 2 cut(s) | 867, 1416 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 313, 347 |
| BciT130I | CCWGG | 2 cut(s) | 1122, 1206 |
| BcnI | CCSGG | 1 cut(s) | 306 |
| BcoDI | GTCTC | 2 cut(s) | 1278, 1372 |
| BfaI | CTAG | 1 cut(s) | 1362 |
| BfmI | CTRYAG | 2 cut(s) | 429, 519 |
| BfrI | CTTAAG | 2 cut(s) | 455, 1289 |
| BfuAI | ACCTGC | 2 cut(s) | 113, 1051 |
| BisI | GCNGC | 1 cut(s) | 1229 |
| BlsI | GCNGC | 1 cut(s) | 1230 |
| Bme1390I | CCNGG | 3 cut(s) | 306, 1122, 1206 |
| Bme18I | GGWCC | 2 cut(s) | 379, 1199 |
| BmgT120I | GGNCC | 2 cut(s) | 379, 1199 |
| BmiI | GGNNCC | 2 cut(s) | 222, 381 |
| BmrFI | CCNGG | 3 cut(s) | 306, 1122, 1206 |
| BmsI | GCATC | 5 cut(s) | 297, 481, 770, 989, 1273 |
| BpiI | GAAGAC | 2 cut(s) | 117, 1035 |
| BpmI | CTGGAG | 1 cut(s) | 1298 |
| BpuEI | CTTGAG | 1 cut(s) | 1167 |
| BpuMI | CCSGG | 1 cut(s) | 306 |
| Bsa29I | ATCGAT | 1 cut(s) | 291 |
| BsaAI | YACGTR | 1 cut(s) | 1113 |
| BsaJI | CCNNGG | 2 cut(s) | 883, 1332 |
| BsaWI | WCCGGW | 1 cut(s) | 800 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 262, 292 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 449, 695, 1184 |
| Bse118I | RCCGGY | 1 cut(s) | 800 |
| Bse1I | ACTGG | 1 cut(s) | 744 |
| Bse21I | CCTNAGG | 1 cut(s) | 987 |
| Bse3DI | GCAATG | 1 cut(s) | 933 |
| BseBI | CCWGG | 2 cut(s) | 1122, 1206 |
| BseCI | ATCGAT | 1 cut(s) | 291 |
| BseDI | CCNNGG | 2 cut(s) | 883, 1332 |
| BseGI | GGATG | 5 cut(s) | 547, 715, 785, 1135, 1288 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 449, 695, 1184 |
| BseMI | GCAATG | 1 cut(s) | 933 |
| BseMII | CTCAG | 6 cut(s) | 389, 590, 638, 783, 1001, 1044 |
| BseNI | ACTGG | 1 cut(s) | 744 |
| BseRI | GAGGAG | 5 cut(s) | 158, 616, 674, 975, 1070 |
| BseXI | GCAGC | 1 cut(s) | 1240 |
| BsgI | GTGCAG | 1 cut(s) | 353 |
| Bsh1236I | CGCG | 1 cut(s) | 27 |
| BshFI | GGCC | 1 cut(s) | 882 |
| BshTI | ACCGGT | 1 cut(s) | 800 |
| BshVI | ATCGAT | 1 cut(s) | 291 |
| BsiSI | CCGG | 2 cut(s) | 305, 801 |
| BslFI | GGGAC | 3 cut(s) | 245, 672, 878 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 449, 695, 1184 |
| BsmAI | GTCTC | 2 cut(s) | 1278, 1372 |
| BsmFI | GGGAC | 3 cut(s) | 245, 672, 878 |
| BsnI | GGCC | 1 cut(s) | 882 |
| Bsp143I | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| BspACI | CCGC | 2 cut(s) | 267, 1073 |
| BspANI | GGCC | 1 cut(s) | 882 |
| BspCNI | CTCAG | 6 cut(s) | 388, 591, 637, 782, 1000, 1045 |
| BspDI | ATCGAT | 1 cut(s) | 291 |
| BspFNI | CGCG | 1 cut(s) | 27 |
| BspHI | TCATGA | 1 cut(s) | 789 |
| BspLI | GGNNCC | 2 cut(s) | 222, 381 |
| BspMAI | CTGCAG | 1 cut(s) | 523 |
| BspMI | ACCTGC | 2 cut(s) | 113, 1051 |
| BspPI | GGATC | 4 cut(s) | 319, 533, 1091, 1228 |
| BspQI | GCTCTTC | 1 cut(s) | 201 |
| BspTI | CTTAAG | 2 cut(s) | 455, 1289 |
| BsrDI | GCAATG | 1 cut(s) | 933 |
| BsrFI | RCCGGY | 1 cut(s) | 800 |
| BsrI | ACTGG | 1 cut(s) | 744 |
| BssAI | RCCGGY | 1 cut(s) | 800 |
| BssECI | CCNNGG | 2 cut(s) | 883, 1332 |
| BssMI | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| BssNAI | GTATAC | 1 cut(s) | 360 |
| BssSI | CACGAG | 2 cut(s) | 152, 745 |
| BssT1I | CCWWGG | 1 cut(s) | 1332 |
| Bst1107I | GTATAC | 1 cut(s) | 360 |
| Bst2BI | CACGAG | 2 cut(s) | 152, 745 |
| Bst2UI | CCWGG | 2 cut(s) | 1122, 1206 |
| Bst4CI | ACNGT | 2 cut(s) | 19, 225 |
| Bst6I | CTCTTC | 1 cut(s) | 201 |
| BstAFI | CTTAAG | 2 cut(s) | 455, 1289 |
| BstBAI | YACGTR | 1 cut(s) | 1113 |
| BstC8I | GCNNGC | 2 cut(s) | 519, 1299 |
| BstDEI | CTNAG | 7 cut(s) | 234, 375, 599, 624, 769, 987, 1053 |
| BstDSI | CCRYGG | 1 cut(s) | 883 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 447 |
| BstF5I | GGATG | 5 cut(s) | 547, 715, 785, 1135, 1288 |
| BstFNI | CGCG | 1 cut(s) | 27 |
| BstKTI | GATC | 5 cut(s) | 327, 528, 1099, 1135, 1223 |
| BstMAI | GTCTC | 2 cut(s) | 1278, 1372 |
| BstMBI | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 239, 460, 1307 |
| BstNI | CCWGG | 2 cut(s) | 1122, 1206 |
| BstNSI | RCATGY | 1 cut(s) | 949 |
| BstSCI | CCNGG | 3 cut(s) | 304, 1120, 1204 |
| BstSFI | CTRYAG | 2 cut(s) | 429, 519 |
| BstUI | CGCG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 1 cut(s) | 1240 |
| BstV2I | GAAGAC | 2 cut(s) | 117, 1035 |
| BstZ17I | GTATAC | 1 cut(s) | 360 |
| Bsu15I | ATCGAT | 1 cut(s) | 291 |
| Bsu36I | CCTNAGG | 1 cut(s) | 987 |
| BsuRI | GGCC | 1 cut(s) | 882 |
| BsuTUI | ATCGAT | 1 cut(s) | 291 |
| BtgI | CCRYGG | 1 cut(s) | 883 |
| BtsCI | GGATG | 5 cut(s) | 547, 715, 785, 1135, 1288 |
| BveI | ACCTGC | 2 cut(s) | 113, 1051 |
| Cac8I | GCNNGC | 2 cut(s) | 519, 1299 |
| CciI | TCATGA | 1 cut(s) | 789 |
| Cfr10I | RCCGGY | 1 cut(s) | 800 |
| Cfr13I | GGNCC | 2 cut(s) | 379, 1199 |
| ClaI | ATCGAT | 1 cut(s) | 291 |
| Csp6I | GTAC | 1 cut(s) | 1114 |
| CspAI | ACCGGT | 1 cut(s) | 800 |
| CviAII | CATG | 8 cut(s) | 285, 537, 654, 695, 760, 790, 909, 946 |
| CviQI | GTAC | 1 cut(s) | 1114 |
| DdeI | CTNAG | 7 cut(s) | 234, 375, 599, 624, 769, 987, 1053 |
| DpnI | GATC | 5 cut(s) | 326, 527, 1098, 1134, 1222 |
| DpnII | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| Eam1104I | CTCTTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 201 |
| Eco130I | CCWWGG | 1 cut(s) | 1332 |
| Eco47I | GGWCC | 2 cut(s) | 379, 1199 |
| Eco57I | CTGAAG | 1 cut(s) | 468 |
| Eco81I | CCTNAGG | 1 cut(s) | 987 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 447 |
| EcoO109I | RGGNCCY | 1 cut(s) | 379 |
| EcoRII | CCWGG | 2 cut(s) | 1120, 1204 |
| EcoT14I | CCWWGG | 1 cut(s) | 1332 |
| EcoT22I | ATGCAT | 1 cut(s) | 290 |
| ErhI | CCWWGG | 1 cut(s) | 1332 |
| FaeI | CATG | 8 cut(s) | 288, 540, 657, 698, 763, 793, 912, 949 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 239, 271 |
| FaqI | GGGAC | 3 cut(s) | 245, 672, 878 |
| FatI | CATG | 8 cut(s) | 284, 536, 653, 694, 759, 789, 908, 945 |
| FauI | CCCGC | 1 cut(s) | 1066 |
| FauNDI | CATATG | 1 cut(s) | 413 |
| FblI | GTMKAC | 1 cut(s) | 359 |
| Fnu4HI | GCNGC | 1 cut(s) | 1229 |
| FokI | GGATG | 5 cut(s) | 554, 722, 792, 1122, 1295 |
| Fsp4HI | GCNGC | 1 cut(s) | 1229 |
| FspBI | CTAG | 1 cut(s) | 1362 |
| GluI | GCNGC | 1 cut(s) | 1229 |
| GsuI | CTGGAG | 1 cut(s) | 1298 |
| HaeIII | GGCC | 1 cut(s) | 882 |
| HapII | CCGG | 2 cut(s) | 305, 801 |
| Hin1II | CATG | 8 cut(s) | 288, 540, 657, 698, 763, 793, 912, 949 |
| HindIII | AAGCTT | 2 cut(s) | 1245, 1260 |
| HinfI | GANTC | 7 cut(s) | 92, 251, 275, 610, 767, 913, 1171 |
| HpaII | CCGG | 2 cut(s) | 305, 801 |
| HphI | GGTGA | 5 cut(s) | 162, 360, 647, 1075, 1242 |
| Hpy166II | GTNNAC | 3 cut(s) | 360, 368, 766 |
| Hpy188I | TCNGA | 4 cut(s) | 615, 627, 1015, 1054 |
| Hpy188III | TCNNGA | 7 cut(s) | 377, 446, 553, 562, 790, 806, 1277 |
| Hpy8I | GTNNAC | 3 cut(s) | 360, 368, 766 |
| HpyAV | CCTTC | 3 cut(s) | 6, 241, 443 |
| HpyCH4III | ACNGT | 2 cut(s) | 19, 225 |
| HpyCH4IV | ACGT | 2 cut(s) | 1112, 1167 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 239, 460, 1307 |
| HpyF3I | CTNAG | 7 cut(s) | 234, 375, 599, 624, 769, 987, 1053 |
| HpySE526I | ACGT | 2 cut(s) | 1112, 1167 |
| Hsp92II | CATG | 8 cut(s) | 288, 540, 657, 698, 763, 793, 912, 949 |
| Kzo9I | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| LguI | GCTCTTC | 1 cut(s) | 201 |
| LmnI | GCTCC | 3 cut(s) | 1057, 1294, 1348 |
| Lsp1109I | GCAGC | 1 cut(s) | 1240 |
| LweI | GCATC | 5 cut(s) | 297, 481, 770, 989, 1273 |
| MaeI | CTAG | 1 cut(s) | 1362 |
| MaeII | ACGT | 2 cut(s) | 1112, 1167 |
| MaeIII | GTNAC | 2 cut(s) | 336, 635 |
| MalI | GATC | 5 cut(s) | 326, 527, 1098, 1134, 1222 |
| MboI | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| MboII | GAAGA | 4 cut(s) | 122, 126, 218, 1035 |
| MfeI | CAATTG | 2 cut(s) | 105, 347 |
| MlyI | GAGTC | 3 cut(s) | 86, 269, 761 |
| MmeI | TCCRAC | 1 cut(s) | 1130 |
| Mph1103I | ATGCAT | 1 cut(s) | 290 |
| MroXI | GAANNNNTTC | 1 cut(s) | 569 |
| MseI | TTAA | 7 cut(s) | 227, 456, 954, 1290, 1305, 1344, 1420 |
| MslI | CAYNNNNRTG | 3 cut(s) | 699, 788, 907 |
| MspCI | CTTAAG | 2 cut(s) | 455, 1289 |
| MspI | CCGG | 2 cut(s) | 305, 801 |
| MspR9I | CCNGG | 3 cut(s) | 306, 1122, 1206 |
| MunI | CAATTG | 2 cut(s) | 105, 347 |
| MvaI | CCWGG | 2 cut(s) | 1122, 1206 |
| MvnI | CGCG | 1 cut(s) | 27 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 239, 460, 1307 |
| NciI | CCSGG | 1 cut(s) | 306 |
| NdeI | CATATG | 1 cut(s) | 413 |
| NdeII | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| NlaIII | CATG | 8 cut(s) | 288, 540, 657, 698, 763, 793, 912, 949 |
| NlaIV | GGNNCC | 2 cut(s) | 222, 381 |
| NmuCI | GTSAC | 1 cut(s) | 635 |
| NsiI | ATGCAT | 1 cut(s) | 290 |
| NspI | RCATGY | 1 cut(s) | 949 |
| PagI | TCATGA | 1 cut(s) | 789 |
| PaqCI | CACCTGC | 1 cut(s) | 1051 |
| PciI | ACATGT | 1 cut(s) | 945 |
| PciSI | GCTCTTC | 1 cut(s) | 201 |
| PdmI | GAANNNNTTC | 1 cut(s) | 569 |
| PfeI | GAWTC | 4 cut(s) | 251, 610, 913, 1171 |
| PfoI | TCCNGGA | 1 cut(s) | 1120 |
| PinAI | ACCGGT | 1 cut(s) | 800 |
| PkrI | GCNGC | 1 cut(s) | 1230 |
| PleI | GAGTC | 3 cut(s) | 86, 269, 761 |
| PpsI | GAGTC | 3 cut(s) | 86, 269, 761 |
| Ppu21I | YACGTR | 1 cut(s) | 1113 |
| PpuMI | RGGWCCY | 1 cut(s) | 379 |
| PscI | ACATGT | 1 cut(s) | 945 |
| Psp5II | RGGWCCY | 1 cut(s) | 379 |
| Psp6I | CCWGG | 2 cut(s) | 1120, 1204 |
| PspGI | CCWGG | 2 cut(s) | 1120, 1204 |
| PspN4I | GGNNCC | 2 cut(s) | 222, 381 |
| PspPI | GGNCC | 2 cut(s) | 379, 1199 |
| PspPPI | RGGWCCY | 1 cut(s) | 379 |
| PstI | CTGCAG | 1 cut(s) | 523 |
| RsaI | GTAC | 1 cut(s) | 1115 |
| RsaNI | GTAC | 1 cut(s) | 1114 |
| RseI | CAYNNNNRTG | 3 cut(s) | 699, 788, 907 |
| SapI | GCTCTTC | 1 cut(s) | 201 |
| SaqAI | TTAA | 7 cut(s) | 227, 456, 954, 1290, 1305, 1344, 1420 |
| SatI | GCNGC | 1 cut(s) | 1229 |
| Sau3AI | GATC | 5 cut(s) | 324, 525, 1096, 1132, 1220 |
| Sau96I | GGNCC | 2 cut(s) | 379, 1199 |
| SbfI | CCTGCAGG | 1 cut(s) | 523 |
| SchI | GAGTC | 3 cut(s) | 86, 269, 761 |
| ScrFI | CCNGG | 3 cut(s) | 306, 1122, 1206 |
| SdaI | CCTGCAGG | 1 cut(s) | 523 |
| SfaNI | GCATC | 5 cut(s) | 297, 481, 770, 989, 1273 |
| SfcI | CTRYAG | 2 cut(s) | 429, 519 |
| SinI | GGWCC | 2 cut(s) | 379, 1199 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 699, 788, 907 |
| SmlI | CTYRAG | 3 cut(s) | 455, 1182, 1289 |
| SmoI | CTYRAG | 3 cut(s) | 455, 1182, 1289 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 523 |
| SsiI | CCGC | 2 cut(s) | 267, 1073 |
| SspMI | CTAG | 1 cut(s) | 1362 |
| StyD4I | CCNGG | 3 cut(s) | 304, 1120, 1204 |
| StyI | CCWWGG | 1 cut(s) | 1332 |
| TaaI | ACNGT | 2 cut(s) | 19, 225 |
| TaiI | ACGT | 2 cut(s) | 1115, 1170 |
| TaqI | TCGA | 5 cut(s) | 10, 291, 323, 1106, 1174 |
| TfiI | GAWTC | 4 cut(s) | 251, 610, 913, 1171 |
| Tru1I | TTAA | 7 cut(s) | 227, 456, 954, 1290, 1305, 1344, 1420 |
| Tru9I | TTAA | 7 cut(s) | 227, 456, 954, 1290, 1305, 1344, 1420 |
| TseFI | GTSAC | 1 cut(s) | 635 |
| TseI | GCWGC | 1 cut(s) | 1228 |
| Tsp45I | GTSAC | 1 cut(s) | 635 |
| TspDTI | ATGAA | 5 cut(s) | 380, 778, 806, 891, 1302 |
| TspGWI | ACGGA | 1 cut(s) | 287 |
| Vha464I | CTTAAG | 2 cut(s) | 455, 1289 |
| VpaK11BI | GGWCC | 2 cut(s) | 379, 1199 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 447 |
| XapI | RAATTY | 2 cut(s) | 436, 616 |
| XceI | RCATGY | 1 cut(s) | 949 |
| XmiI | GTMKAC | 1 cut(s) | 359 |
| XmnI | GAANNNNTTC | 1 cut(s) | 569 |
| XspI | CTAG | 1 cut(s) | 1362 |
| Zsp2I | ATGCAT | 1 cut(s) | 290 |