pycom1341g00030

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00001341
OG0000437
Physical Location & Seq
Forward (+)
75256 .. 76728
1473 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom1341g00030.1

Sequence Viewer

Length: 1050 bp
ATGCAATTGGAAATCATTTTATTATGCAAGTATAACATGTATGGAGATGAACCCCTTAGCCATTCTATCATCCATTCATTCCATTCCATCAAATTCGTTTTACAATCTGTTCTTTTAATTATCATTTTATTTCCCAATTTCGTCCAAATTCACCAAAGTGCTCAAAACTGCCCAGAAAGTGATTTTAAGGCAGTTTTGAGTGTTTTGGGTGATTGTTTTATATTGTGTTTTTACGTTCTTGAGTCAAGTTATTACTTAATTTCGTCCAATTTGTGTTTGTGCTCAAATCTACCCAGAAAGTGGTTTTTAGGCAGATTTGAGTGTGTTTGTGTTGTTTTGAGTCTTTTGGTTTGTCTTAGTGTTTTAAAGTTTAGTTTTGCATTCTTTGAGTCTAGTATATGGTTAACAATCCCTCCTAATCCCCGGTCTAGAACGATCGATCCCTACTTGCATACTTACTACAATTTGACAAAAAGAGGGTTTAATTTGTGTTTAATTATTTTCGCATCAGTAAGTTACGTTCTAAGTGGATTGGACCATTTGTTATTACTAATGTTTTTGTTCATGGTGAACGGGCATCGTTTGAAGCCCTATTATGACACCTTTGTGGAGCATGCCGTGGATGACATACCCTTGGAAGCCGTGGGCCTTAGTAAGGACGCTACTTGGGAGGCAACCCATGCATTCAACAAAGGAAGACCTAGAAAGCACTCCAATTCCAGATTTGCTTGTTTTACTTGCTGTTTGTGTGTTTCTTTGTGTGATTCTATGCTTAAAACATTGAGGACAATGTTTGATTTAAGTTTTATCACCCATTATTTCAAAACTTGTTCCTTGCTGTTTTTAAGTGTTTTTAAGCAGTTTTGGTGTGTTTTAGTATGTTTTGAAGTAAAAATCCGAAAATCAAAGAAAAATTTGAAAAATTTGGTACCTTCCAACACAATGATGAGGATTTGGTTTTTAAATACATGCCTGTTAAAGAGAGTGATTAACATGGATGAAAGTTTGATTTACTCGATGTTTATGCTTGGTTGTGGTTATAACTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Asp_protease_2 RVT_1 Retrotrans_gag rve

Protein Analysis

350

Amino Acids

40.44

Weight (kDa)

8.68

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000437)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G06105
fragaria_vesca FvH4_1g09709 FvH4_4g02101 FvH4_4g08975 FvH4_6g23372 FvH4_6g39851 FvH4_c1g00300
malus_domestica MD01G1176100.v1.1 MD09G1284900.v1.1 MD15G1306600.v1.1
prunus_persica Prupe.1G227700_v2.0.a1
pyrus_communis pycom01g00630 pycom01g01020 pycom01g01690 pycom01g01760 pycom01g04190 pycom01g04400 pycom02g18130 pycom03g10160 pycom05g06370 pycom05g08930 pycom06g05590 pycom10g06320 pycom11g14330 pycom11g15320 pycom11g16240 pycom12416g00050 pycom12420g00010 pycom12420g00120 pycom12426g00180 pycom12426g00710 pycom12531g00010 pycom1256g00020 pycom1256g00050 pycom1341g00030 pycom1353g00030 pycom13g23070 pycom13g23210 pycom13g26260 pycom13g26370 pycom13g26470 pycom13g26980 pycom14g08550 pycom14g08850 pycom1534g00040 pycom15g28760 pycom15g31230 pycom1604g00040 pycom16g21900 pycom16g26030 pycom1739g00020 pycom1739g00050 pycom17g12970 pycom17g17960 pycom17g18300 pycom17g18650 pycom2172g00020 pycom2438g00020 pycom436g00370 pycom436g00390 pycom576g00050 pycom76g00020
rosa_chinensis RchiOBHm_Chr1g0320811 RchiOBHm_Chr2g0135321 RchiOBHm_Chr3g0485721 RchiOBHm_Chr7g0236571
rosa_multiflora Rmu_sc0000185.1_g000007 Rmu_sc0002094.1_g000030 Rmu_sc0002764.1_g000007 Rmu_sc0002809.1_g000014 Rmu_sc0003005.1_g000007 Rmu_sc0003798.1_g000005 Rmu_sc0004646.1_g000027 Rmu_sc0004665.1_g000009 Rmu_sc0004818.1_g000001 Rmu_sc0004988.1_g000031 Rmu_sc0006373.1_g000007 Rmu_sc0007142.1_g000015 Rmu_sc0009930.1_g000001 Rmu_sc0011451.1_g000001 Rmu_sc0020424.1_g000001 Rmu_sc0036944.1_g000001 Rmu_ssc0000062.1_g000010
rosa_roxburghii Rroxscaffold_2G00123930 Rroxscaffold_3G00231480 Rroxscaffold_6G00413880
rosa_rugosa Rorug04G0084800
rosa_samantha Rh3BG150500 Rh6DG232400
rosa_wichuraiana Rw2G018400 Rw3G027860 Rw4G021220 Rw6G020670 Rw6G037970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1041
Acc65I GGTACC 1 cut(s) 928
AccB1I GGYRCC 1 cut(s) 928
AccB7I CCANNNNNTGG 1 cut(s) 300
AclWI GGATC 1 cut(s) 434
AcsI RAATTY 4 cut(s) 92, 147, 913, 922
AfaI GTAC 1 cut(s) 930
AfiI CCNNNNNNNGG 2 cut(s) 300, 655
AflIII ACRYGT 1 cut(s) 36
AgsI TTSAA 5 cut(s) 586, 688, 823, 887, 919
AleI CACNNNNGTG 2 cut(s) 156, 605
AloI GAACNNNNNNTCC 2 cut(s) 424, 456
Alw21I GWGCWC 2 cut(s) 163, 284
AlwI GGATC 1 cut(s) 434
AoxI GGCC 1 cut(s) 646
ApoI RAATTY 4 cut(s) 92, 147, 913, 922
Asp718I GGTACC 1 cut(s) 928
AspS9I GGNCC 2 cut(s) 535, 646
AsuC2I CCSGG 1 cut(s) 424
AsuHPI GGTGA 4 cut(s) 143, 221, 580, 802
AvaII GGWCC 1 cut(s) 535
BanI GGYRCC 1 cut(s) 928
BbsI GAAGAC 1 cut(s) 703
Bbv12I GWGCWC 2 cut(s) 163, 284
BccI CCATC 1 cut(s) 95
BceAI ACGGC 2 cut(s) 602, 626
BcgI CGANNNNNNTGC 2 cut(s) 1006, 1040
BcnI CCSGG 1 cut(s) 424
BfaI CTAG 3 cut(s) 393, 429, 702
Bme1390I CCNGG 1 cut(s) 424
Bme18I GGWCC 1 cut(s) 535
BmgT120I GGNCC 2 cut(s) 535, 646
BmiI GGNNCC 1 cut(s) 930
BmrFI CCNGG 1 cut(s) 424
BmsI GCATC 2 cut(s) 515, 586
BpiI GAAGAC 1 cut(s) 703
Bpu10I CCTNAGC 1 cut(s) 56
BpuEI CTTGAG 1 cut(s) 260
BpuMI CCSGG 1 cut(s) 424
Bsa29I ATCGAT 1 cut(s) 438
BsaJI CCNNGG 4 cut(s) 422, 618, 633, 642
BsaXI ACNNNNNCTCC 2 cut(s) 397, 427
Bsc4I CCNNNNNNNGG 2 cut(s) 300, 655
BseCI ATCGAT 1 cut(s) 438
BseDI CCNNGG 4 cut(s) 422, 618, 633, 642
BseGI GGATG 3 cut(s) 69, 628, 1003
BseLI CCNNNNNNNGG 2 cut(s) 300, 655
Bsh1285I CGRYCG 1 cut(s) 438
BshFI GGCC 1 cut(s) 648
BshNI GGYRCC 1 cut(s) 928
BshVI ATCGAT 1 cut(s) 438
BsiEI CGRYCG 1 cut(s) 438
BsiHKAI GWGCWC 2 cut(s) 163, 284
BsiSI CCGG 1 cut(s) 424
BslI CCNNNNNNNGG 2 cut(s) 300, 655
BsmI GAATGC 2 cut(s) 380, 683
BsnI GGCC 1 cut(s) 648
Bsp1286I GDGCHC 2 cut(s) 163, 284
Bsp143I GATC 2 cut(s) 435, 439
BspANI GGCC 1 cut(s) 648
BspDI ATCGAT 1 cut(s) 438
BspLI GGNNCC 1 cut(s) 930
BspPI GGATC 1 cut(s) 434
BspT107I GGYRCC 1 cut(s) 928
BssECI CCNNGG 4 cut(s) 422, 618, 633, 642
BssMI GATC 2 cut(s) 435, 439
BssT1I CCWWGG 1 cut(s) 633
BstAPI GCANNNNNTGC 1 cut(s) 680
BstC8I GCNNGC 1 cut(s) 615
BstDEI CTNAG 4 cut(s) 56, 356, 524, 650
BstDSI CCRYGG 2 cut(s) 618, 642
BstENI CCTNNNNNAGG 1 cut(s) 653
BstF5I GGATG 3 cut(s) 69, 628, 1003
BstKTI GATC 2 cut(s) 438, 442
BstMBI GATC 2 cut(s) 435, 439
BstMCI CGRYCG 1 cut(s) 438
BstMWI GCNNNNNNNGC 1 cut(s) 680
BstNSI RCATGY 3 cut(s) 40, 617, 972
BstSCI CCNGG 1 cut(s) 422
BstV2I GAAGAC 1 cut(s) 703
Bsu15I ATCGAT 1 cut(s) 438
BsuRI GGCC 1 cut(s) 648
BsuTUI ATCGAT 1 cut(s) 438
BtgI CCRYGG 2 cut(s) 618, 642
BtsCI GGATG 3 cut(s) 69, 628, 1003
Cac8I GCNNGC 1 cut(s) 615
Cfr13I GGNCC 2 cut(s) 535, 646
ClaI ATCGAT 1 cut(s) 438
CseI GACGC 1 cut(s) 668
Csp6I GTAC 1 cut(s) 929
CviAII CATG 6 cut(s) 37, 565, 614, 680, 969, 994
CviJI RGCY 4 cut(s) 60, 589, 641, 648
CviKI_1 RGCY 4 cut(s) 60, 589, 641, 648
CviQI GTAC 1 cut(s) 929
DdeI CTNAG 4 cut(s) 56, 356, 524, 650
DpnI GATC 2 cut(s) 437, 441
DpnII GATC 2 cut(s) 435, 439
DraI TTTAAA 2 cut(s) 366, 963
Eco130I CCWWGG 1 cut(s) 633
Eco47I GGWCC 1 cut(s) 535
EcoNI CCTNNNNNAGG 1 cut(s) 653
EcoT14I CCWWGG 1 cut(s) 633
EcoT22I ATGCAT 1 cut(s) 685
ErhI CCWWGG 1 cut(s) 633
FaeI CATG 6 cut(s) 40, 568, 617, 683, 972, 997
FatI CATG 6 cut(s) 36, 564, 613, 679, 968, 993
FokI GGATG 3 cut(s) 56, 635, 1010
FspBI CTAG 3 cut(s) 393, 429, 702
HaeIII GGCC 1 cut(s) 648
HapII CCGG 1 cut(s) 424
HgaI GACGC 1 cut(s) 668
Hin1II CATG 6 cut(s) 40, 568, 617, 683, 972, 997
HincII GTYRAC 1 cut(s) 405
HindII GTYRAC 1 cut(s) 405
HinfI GANTC 4 cut(s) 242, 340, 389, 764
HpaI GTTAAC 1 cut(s) 405
HpaII CCGG 1 cut(s) 424
HphI GGTGA 4 cut(s) 143, 221, 580, 802
Hpy166II GTNNAC 2 cut(s) 405, 571
Hpy188I TCNGA 1 cut(s) 899
Hpy188III TCNNGA 3 cut(s) 239, 429, 720
Hpy8I GTNNAC 2 cut(s) 405, 571
HpyAV CCTTC 1 cut(s) 942
HpyCH4IV ACGT 2 cut(s) 234, 519
HpyCH4V TGCA 5 cut(s) 4, 27, 380, 451, 683
HpyF10VI GCNNNNNNNGC 1 cut(s) 680
HpyF3I CTNAG 4 cut(s) 56, 356, 524, 650
HpySE526I ACGT 2 cut(s) 234, 519
Hsp92II CATG 6 cut(s) 40, 568, 617, 683, 972, 997
KpnI GGTACC 1 cut(s) 932
KspAI GTTAAC 1 cut(s) 405
Kzo9I GATC 2 cut(s) 435, 439
LmnI GCTCC 1 cut(s) 610
LpnPI CCDG 5 cut(s) 186, 307, 437, 733, 986
LweI GCATC 2 cut(s) 515, 586
MaeI CTAG 3 cut(s) 393, 429, 702
MaeII ACGT 2 cut(s) 234, 519
MaeIII GTNAC 1 cut(s) 515
MalI GATC 2 cut(s) 437, 441
MboI GATC 2 cut(s) 435, 439
MboII GAAGA 1 cut(s) 708
MfeI CAATTG 1 cut(s) 5
MhlI GDGCHC 2 cut(s) 163, 284
MlyI GAGTC 3 cut(s) 251, 349, 398
MmeI TCCRAC 1 cut(s) 960
MnlI CCTC 5 cut(s) 423, 470, 664, 777, 942
Mph1103I ATGCAT 1 cut(s) 685
MslI CAYNNNNRTG 3 cut(s) 156, 605, 944
MspI CCGG 1 cut(s) 424
MspR9I CCNGG 1 cut(s) 424
MunI CAATTG 1 cut(s) 5
Mva1269I GAATGC 2 cut(s) 380, 683
MwoI GCNNNNNNNGC 1 cut(s) 680
NciI CCSGG 1 cut(s) 424
NdeII GATC 2 cut(s) 435, 439
NlaIII CATG 6 cut(s) 40, 568, 617, 683, 972, 997
NlaIV GGNNCC 1 cut(s) 930
NsiI ATGCAT 1 cut(s) 685
NspI RCATGY 3 cut(s) 40, 617, 972
OliI CACNNNNGTG 2 cut(s) 156, 605
PaeI GCATGC 1 cut(s) 617
PciI ACATGT 1 cut(s) 36
PctI GAATGC 2 cut(s) 380, 683
PfeI GAWTC 1 cut(s) 764
PflMI CCANNNNNTGG 1 cut(s) 300
Ple19I CGATCG 1 cut(s) 438
PleI GAGTC 3 cut(s) 250, 348, 397
PpsI GAGTC 3 cut(s) 250, 348, 397
PscI ACATGT 1 cut(s) 36
PsiI TTATAA 1 cut(s) 1041
PspN4I GGNNCC 1 cut(s) 930
PspPI GGNCC 2 cut(s) 535, 646
PsrI GAACNNNNNNTAC 2 cut(s) 504, 536
PvuI CGATCG 1 cut(s) 438
RsaI GTAC 1 cut(s) 930
RsaNI GTAC 1 cut(s) 929
RseI CAYNNNNRTG 3 cut(s) 156, 605, 944
Sau3AI GATC 2 cut(s) 435, 439
Sau96I GGNCC 2 cut(s) 535, 646
SchI GAGTC 3 cut(s) 251, 349, 398
ScrFI CCNGG 1 cut(s) 424
SduI GDGCHC 2 cut(s) 163, 284
SetI ASST 5 cut(s) 237, 522, 605, 703, 934
SfaNI GCATC 2 cut(s) 515, 586
SinI GGWCC 1 cut(s) 535
SmiMI CAYNNNNRTG 3 cut(s) 156, 605, 944
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
SphI GCATGC 1 cut(s) 617
SspMI CTAG 3 cut(s) 393, 429, 702
StyD4I CCNGG 1 cut(s) 422
StyI CCWWGG 1 cut(s) 633
TaiI ACGT 2 cut(s) 237, 522
TaqI TCGA 2 cut(s) 438, 1016
TfiI GAWTC 1 cut(s) 764
TspDTI ATGAA 4 cut(s) 63, 66, 553, 1014
Van91I CCANNNNNTGG 1 cut(s) 300
VpaK11BI GGWCC 1 cut(s) 535
XagI CCTNNNNNAGG 1 cut(s) 653
XapI RAATTY 4 cut(s) 92, 147, 913, 922
XbaI TCTAGA 1 cut(s) 428
XceI RCATGY 3 cut(s) 40, 617, 972
XspI CTAG 3 cut(s) 393, 429, 702
Zsp2I ATGCAT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.