RNA splicing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 477 |
| AciI | CCGC | 1 cut(s) | 194 |
| AcoI | YGGCCR | 1 cut(s) | 234 |
| AcsI | RAATTY | 1 cut(s) | 293 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 162, 477 |
| AgeI | ACCGGT | 1 cut(s) | 406 |
| AgsI | TTSAA | 5 cut(s) | 119, 146, 170, 304, 433 |
| AluBI | AGCT | 3 cut(s) | 12, 217, 312 |
| AluI | AGCT | 3 cut(s) | 12, 217, 312 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 278 |
| Ama87I | CYCGRG | 1 cut(s) | 226 |
| AoxI | GGCC | 3 cut(s) | 153, 234, 468 |
| ApeKI | GCWGC | 3 cut(s) | 191, 242, 272 |
| ApoI | RAATTY | 1 cut(s) | 293 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 38, 70 |
| AsiGI | ACCGGT | 1 cut(s) | 406 |
| AspA2I | CCTAGG | 1 cut(s) | 266 |
| AspS9I | GGNCC | 1 cut(s) | 355 |
| AsuHPI | GGTGA | 1 cut(s) | 421 |
| AsuII | TTCGAA | 1 cut(s) | 381 |
| AvaI | CYCGRG | 1 cut(s) | 226 |
| AvaII | GGWCC | 1 cut(s) | 355 |
| AvrII | CCTAGG | 1 cut(s) | 266 |
| BalI | TGGCCA | 1 cut(s) | 236 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 162, 194 |
| BbsI | GAAGAC | 1 cut(s) | 290 |
| BbvI | GCAGC | 3 cut(s) | 203, 254, 284 |
| BccI | CCATC | 1 cut(s) | 215 |
| BceAI | ACGGC | 2 cut(s) | 64, 174 |
| BfaI | CTAG | 2 cut(s) | 105, 267 |
| BisI | GCNGC | 3 cut(s) | 192, 243, 273 |
| BlnI | CCTAGG | 1 cut(s) | 266 |
| BlsI | GCNGC | 3 cut(s) | 193, 244, 274 |
| Bme18I | GGWCC | 1 cut(s) | 355 |
| BmeT110I | CYCGRG | 1 cut(s) | 226 |
| BmgT120I | GGNCC | 1 cut(s) | 355 |
| BmiI | GGNNCC | 1 cut(s) | 357 |
| BmsI | GCATC | 1 cut(s) | 264 |
| BpiI | GAAGAC | 1 cut(s) | 290 |
| Bpu14I | TTCGAA | 1 cut(s) | 381 |
| BpuEI | CTTGAG | 1 cut(s) | 379 |
| BsaJI | CCNNGG | 6 cut(s) | 156, 186, 225, 266, 337, 471 |
| BsaWI | WCCGGW | 1 cut(s) | 406 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 162, 477 |
| Bse118I | RCCGGY | 1 cut(s) | 406 |
| BseDI | CCNNGG | 6 cut(s) | 156, 186, 225, 266, 337, 471 |
| BseGI | GGATG | 1 cut(s) | 255 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 162, 477 |
| BseMII | CTCAG | 1 cut(s) | 270 |
| BseRI | GAGGAG | 1 cut(s) | 164 |
| BseXI | GCAGC | 3 cut(s) | 203, 254, 284 |
| BshFI | GGCC | 3 cut(s) | 155, 236, 470 |
| BshTI | ACCGGT | 1 cut(s) | 406 |
| BsiHKCI | CYCGRG | 1 cut(s) | 226 |
| BsiSI | CCGG | 1 cut(s) | 407 |
| BslFI | GGGAC | 1 cut(s) | 93 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 162, 477 |
| BsmFI | GGGAC | 1 cut(s) | 93 |
| BsnI | GGCC | 3 cut(s) | 155, 236, 470 |
| BsoBI | CYCGRG | 1 cut(s) | 226 |
| Bsp119I | TTCGAA | 1 cut(s) | 381 |
| Bsp19I | CCATGG | 2 cut(s) | 186, 337 |
| BspACI | CCGC | 1 cut(s) | 194 |
| BspANI | GGCC | 3 cut(s) | 155, 236, 470 |
| BspCNI | CTCAG | 1 cut(s) | 271 |
| BspLI | GGNNCC | 1 cut(s) | 357 |
| BspT104I | TTCGAA | 1 cut(s) | 381 |
| BsrFI | RCCGGY | 1 cut(s) | 406 |
| BssAI | RCCGGY | 1 cut(s) | 406 |
| BssECI | CCNNGG | 6 cut(s) | 156, 186, 225, 266, 337, 471 |
| BssT1I | CCWWGG | 4 cut(s) | 186, 266, 337, 471 |
| Bst6I | CTCTTC | 2 cut(s) | 141, 165 |
| BstBI | TTCGAA | 1 cut(s) | 381 |
| BstC8I | GCNNGC | 1 cut(s) | 314 |
| BstDEI | CTNAG | 1 cut(s) | 279 |
| BstDSI | CCRYGG | 3 cut(s) | 156, 186, 337 |
| BstF5I | GGATG | 1 cut(s) | 255 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 242 |
| BstV1I | GCAGC | 3 cut(s) | 203, 254, 284 |
| BstV2I | GAAGAC | 1 cut(s) | 290 |
| BsuRI | GGCC | 3 cut(s) | 155, 236, 470 |
| BtgI | CCRYGG | 3 cut(s) | 156, 186, 337 |
| BtsCI | GGATG | 1 cut(s) | 255 |
| Cac8I | GCNNGC | 1 cut(s) | 314 |
| CaiI | CAGNNNCTG | 1 cut(s) | 278 |
| Cfr10I | RCCGGY | 1 cut(s) | 406 |
| Cfr13I | GGNCC | 1 cut(s) | 355 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CspAI | ACCGGT | 1 cut(s) | 406 |
| CviAII | CATG | 2 cut(s) | 187, 338 |
| CviJI | RGCY | 9 cut(s) | 12, 155, 217, 236, 245, 275, 312, 443, 470 |
| CviKI_1 | RGCY | 9 cut(s) | 12, 155, 217, 236, 245, 275, 312, 443, 470 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 1 cut(s) | 279 |
| DraI | TTTAAA | 1 cut(s) | 372 |
| EaeI | YGGCCR | 1 cut(s) | 234 |
| Eam1104I | CTCTTC | 2 cut(s) | 141, 165 |
| EarI | CTCTTC | 2 cut(s) | 141, 165 |
| Eco130I | CCWWGG | 4 cut(s) | 186, 266, 337, 471 |
| Eco47I | GGWCC | 1 cut(s) | 355 |
| Eco88I | CYCGRG | 1 cut(s) | 226 |
| EcoO109I | RGGNCCY | 1 cut(s) | 355 |
| EcoT14I | CCWWGG | 4 cut(s) | 186, 266, 337, 471 |
| ErhI | CCWWGG | 4 cut(s) | 186, 266, 337, 471 |
| FaeI | CATG | 2 cut(s) | 190, 341 |
| FaiI | YATR | 8 cut(s) | 33, 188, 324, 326, 339, 391, 401, 428 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 296, 328 |
| FaqI | GGGAC | 1 cut(s) | 93 |
| FatI | CATG | 2 cut(s) | 186, 337 |
| Fnu4HI | GCNGC | 3 cut(s) | 192, 243, 273 |
| FokI | GGATG | 1 cut(s) | 242 |
| Fsp4HI | GCNGC | 3 cut(s) | 192, 243, 273 |
| FspBI | CTAG | 2 cut(s) | 105, 267 |
| GluI | GCNGC | 3 cut(s) | 192, 243, 273 |
| HaeIII | GGCC | 3 cut(s) | 155, 236, 470 |
| HapII | CCGG | 1 cut(s) | 407 |
| Hin1II | CATG | 2 cut(s) | 190, 341 |
| HinfI | GANTC | 1 cut(s) | 92 |
| HpaII | CCGG | 1 cut(s) | 407 |
| HphI | GGTGA | 1 cut(s) | 421 |
| Hpy166II | GTNNAC | 2 cut(s) | 412, 418 |
| Hpy188III | TCNNGA | 3 cut(s) | 26, 58, 110 |
| Hpy8I | GTNNAC | 2 cut(s) | 412, 418 |
| HpyAV | CCTTC | 2 cut(s) | 66, 433 |
| HpyCH4IV | ACGT | 1 cut(s) | 414 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 242, 255 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 242 |
| HpyF3I | CTNAG | 1 cut(s) | 279 |
| HpySE526I | ACGT | 1 cut(s) | 414 |
| Hsp92II | CATG | 2 cut(s) | 190, 341 |
| LmnI | GCTCC | 1 cut(s) | 214 |
| LpnPI | CCDG | 4 cut(s) | 33, 291, 322, 420 |
| Lsp1109I | GCAGC | 3 cut(s) | 203, 254, 284 |
| LweI | GCATC | 1 cut(s) | 264 |
| MaeI | CTAG | 2 cut(s) | 105, 267 |
| MaeII | ACGT | 1 cut(s) | 414 |
| MboII | GAAGA | 5 cut(s) | 28, 158, 182, 295, 445 |
| MlsI | TGGCCA | 1 cut(s) | 236 |
| MluCI | AATT | 2 cut(s) | 83, 293 |
| MluNI | TGGCCA | 1 cut(s) | 236 |
| MlyI | GAGTC | 1 cut(s) | 101 |
| MmeI | TCCRAC | 1 cut(s) | 441 |
| MnlI | CCTC | 9 cut(s) | 54, 111, 133, 142, 145, 166, 235, 258, 346 |
| Mox20I | TGGCCA | 1 cut(s) | 236 |
| MscI | TGGCCA | 1 cut(s) | 236 |
| MseI | TTAA | 1 cut(s) | 371 |
| Msp20I | TGGCCA | 1 cut(s) | 236 |
| MspA1I | CMGCKG | 1 cut(s) | 194 |
| MspI | CCGG | 1 cut(s) | 407 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 242 |
| NcoI | CCATGG | 2 cut(s) | 186, 337 |
| NlaIII | CATG | 2 cut(s) | 190, 341 |
| NlaIV | GGNNCC | 1 cut(s) | 357 |
| NspV | TTCGAA | 1 cut(s) | 381 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 54 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 477 |
| PinAI | ACCGGT | 1 cut(s) | 406 |
| PkrI | GCNGC | 3 cut(s) | 193, 244, 274 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PpuMI | RGGWCCY | 1 cut(s) | 355 |
| Psp5II | RGGWCCY | 1 cut(s) | 355 |
| PspN4I | GGNNCC | 1 cut(s) | 357 |
| PspPI | GGNCC | 1 cut(s) | 355 |
| PspPPI | RGGWCCY | 1 cut(s) | 355 |
| PstNI | CAGNNNCTG | 1 cut(s) | 278 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| SaqAI | TTAA | 1 cut(s) | 371 |
| SatI | GCNGC | 3 cut(s) | 192, 243, 273 |
| Sau96I | GGNCC | 1 cut(s) | 355 |
| SchI | GAGTC | 1 cut(s) | 101 |
| SetI | ASST | 7 cut(s) | 14, 22, 144, 167, 219, 314, 417 |
| SfaNI | GCATC | 1 cut(s) | 264 |
| SfuI | TTCGAA | 1 cut(s) | 381 |
| SgrAI | CRCCGGYG | 1 cut(s) | 406 |
| SinI | GGWCC | 1 cut(s) | 355 |
| SmlI | CTYRAG | 1 cut(s) | 394 |
| SmoI | CTYRAG | 1 cut(s) | 394 |
| Sse9I | AATT | 2 cut(s) | 83, 293 |
| SsiI | CCGC | 1 cut(s) | 194 |
| SspMI | CTAG | 2 cut(s) | 105, 267 |
| StyI | CCWWGG | 4 cut(s) | 186, 266, 337, 471 |
| TaiI | ACGT | 1 cut(s) | 417 |
| TaqI | TCGA | 4 cut(s) | 39, 57, 202, 381 |
| TaqII | GACCGA | 1 cut(s) | 302 |
| TasI | AATT | 2 cut(s) | 83, 293 |
| Tru1I | TTAA | 1 cut(s) | 371 |
| Tru9I | TTAA | 1 cut(s) | 371 |
| TseI | GCWGC | 3 cut(s) | 191, 242, 272 |
| TspDTI | ATGAA | 2 cut(s) | 306, 452 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 477 |
| VpaK11BI | GGWCC | 1 cut(s) | 355 |
| XapI | RAATTY | 1 cut(s) | 293 |
| XmaJI | CCTAGG | 1 cut(s) | 266 |
| XspI | CTAG | 2 cut(s) | 105, 267 |