RNA splicing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AgeI | ACCGGT | 1 cut(s) | 220 |
| AgsI | TTSAA | 2 cut(s) | 118, 247 |
| AluBI | AGCT | 1 cut(s) | 31 |
| AluI | AGCT | 1 cut(s) | 31 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 92 |
| Ama87I | CYCGRG | 1 cut(s) | 40 |
| AoxI | GGCC | 1 cut(s) | 48 |
| ApeKI | GCWGC | 3 cut(s) | 5, 56, 86 |
| AsiGI | ACCGGT | 1 cut(s) | 220 |
| AspA2I | CCTAGG | 1 cut(s) | 80 |
| AspS9I | GGNCC | 1 cut(s) | 169 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| AsuII | TTCGAA | 1 cut(s) | 195 |
| AvaI | CYCGRG | 1 cut(s) | 40 |
| AvaII | GGWCC | 1 cut(s) | 169 |
| AvrII | CCTAGG | 1 cut(s) | 80 |
| BalI | TGGCCA | 1 cut(s) | 50 |
| BbsI | GAAGAC | 1 cut(s) | 104 |
| BbvI | GCAGC | 3 cut(s) | 17, 68, 98 |
| BccI | CCATC | 1 cut(s) | 29 |
| BfaI | CTAG | 1 cut(s) | 81 |
| BisI | GCNGC | 3 cut(s) | 6, 57, 87 |
| BlnI | CCTAGG | 1 cut(s) | 80 |
| BlsI | GCNGC | 3 cut(s) | 7, 58, 88 |
| Bme18I | GGWCC | 1 cut(s) | 169 |
| BmeT110I | CYCGRG | 1 cut(s) | 40 |
| BmgT120I | GGNCC | 1 cut(s) | 169 |
| BmiI | GGNNCC | 1 cut(s) | 171 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BpiI | GAAGAC | 1 cut(s) | 104 |
| Bpu14I | TTCGAA | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 1 cut(s) | 193 |
| BsaJI | CCNNGG | 2 cut(s) | 39, 80 |
| BsaWI | WCCGGW | 1 cut(s) | 220 |
| Bse118I | RCCGGY | 1 cut(s) | 220 |
| Bse1I | ACTGG | 1 cut(s) | 123 |
| BseDI | CCNNGG | 2 cut(s) | 39, 80 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseNI | ACTGG | 1 cut(s) | 123 |
| BseXI | GCAGC | 3 cut(s) | 17, 68, 98 |
| BshFI | GGCC | 1 cut(s) | 50 |
| BshTI | ACCGGT | 1 cut(s) | 220 |
| BsiHKCI | CYCGRG | 1 cut(s) | 40 |
| BsiSI | CCGG | 1 cut(s) | 221 |
| BsnI | GGCC | 1 cut(s) | 50 |
| BsoBI | CYCGRG | 1 cut(s) | 40 |
| Bsp119I | TTCGAA | 1 cut(s) | 195 |
| BspANI | GGCC | 1 cut(s) | 50 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspLI | GGNNCC | 1 cut(s) | 171 |
| BspT104I | TTCGAA | 1 cut(s) | 195 |
| BsrFI | RCCGGY | 1 cut(s) | 220 |
| BsrI | ACTGG | 1 cut(s) | 123 |
| BssAI | RCCGGY | 1 cut(s) | 220 |
| BssECI | CCNNGG | 2 cut(s) | 39, 80 |
| BssT1I | CCWWGG | 1 cut(s) | 80 |
| BstBI | TTCGAA | 1 cut(s) | 195 |
| BstC8I | GCNNGC | 1 cut(s) | 265 |
| BstDEI | CTNAG | 2 cut(s) | 93, 272 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 56 |
| BstV1I | GCAGC | 3 cut(s) | 17, 68, 98 |
| BstV2I | GAAGAC | 1 cut(s) | 104 |
| BsuRI | GGCC | 1 cut(s) | 50 |
| Cac8I | GCNNGC | 1 cut(s) | 265 |
| CaiI | CAGNNNCTG | 1 cut(s) | 92 |
| Cfr10I | RCCGGY | 1 cut(s) | 220 |
| Cfr13I | GGNCC | 1 cut(s) | 169 |
| CspAI | ACCGGT | 1 cut(s) | 220 |
| CviJI | RGCY | 5 cut(s) | 31, 50, 59, 89, 267 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 50, 59, 89, 267 |
| DdeI | CTNAG | 2 cut(s) | 93, 272 |
| DraI | TTTAAA | 1 cut(s) | 186 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| Eco130I | CCWWGG | 1 cut(s) | 80 |
| Eco47I | GGWCC | 1 cut(s) | 169 |
| Eco88I | CYCGRG | 1 cut(s) | 40 |
| EcoO109I | RGGNCCY | 1 cut(s) | 169 |
| EcoT14I | CCWWGG | 1 cut(s) | 80 |
| ErhI | CCWWGG | 1 cut(s) | 80 |
| FaiI | YATR | 7 cut(s) | 138, 140, 153, 205, 215, 242, 258 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 252, 284 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 57, 87 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 57, 87 |
| FspBI | CTAG | 1 cut(s) | 81 |
| GluI | GCNGC | 3 cut(s) | 6, 57, 87 |
| HaeIII | GGCC | 1 cut(s) | 50 |
| HapII | CCGG | 1 cut(s) | 221 |
| HpaII | CCGG | 1 cut(s) | 221 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy166II | GTNNAC | 2 cut(s) | 226, 232 |
| Hpy188I | TCNGA | 1 cut(s) | 289 |
| Hpy8I | GTNNAC | 2 cut(s) | 226, 232 |
| HpyAV | CCTTC | 3 cut(s) | 71, 278, 318 |
| HpyCH4IV | ACGT | 1 cut(s) | 228 |
| HpyCH4V | TGCA | 2 cut(s) | 56, 69 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 56 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 272 |
| HpySE526I | ACGT | 1 cut(s) | 228 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 3 cut(s) | 105, 136, 234 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 68, 98 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeI | CTAG | 1 cut(s) | 81 |
| MaeII | ACGT | 1 cut(s) | 228 |
| MboII | GAAGA | 2 cut(s) | 109, 259 |
| MlsI | TGGCCA | 1 cut(s) | 50 |
| MluNI | TGGCCA | 1 cut(s) | 50 |
| MmeI | TCCRAC | 1 cut(s) | 312 |
| MnlI | CCTC | 2 cut(s) | 49, 160 |
| Mox20I | TGGCCA | 1 cut(s) | 50 |
| MscI | TGGCCA | 1 cut(s) | 50 |
| MseI | TTAA | 1 cut(s) | 185 |
| Msp20I | TGGCCA | 1 cut(s) | 50 |
| MspI | CCGG | 1 cut(s) | 221 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 56 |
| NlaIV | GGNNCC | 1 cut(s) | 171 |
| NspV | TTCGAA | 1 cut(s) | 195 |
| PinAI | ACCGGT | 1 cut(s) | 220 |
| PkrI | GCNGC | 3 cut(s) | 7, 58, 88 |
| PpuMI | RGGWCCY | 1 cut(s) | 169 |
| Psp5II | RGGWCCY | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 1 cut(s) | 171 |
| PspPI | GGNCC | 1 cut(s) | 169 |
| PspPPI | RGGWCCY | 1 cut(s) | 169 |
| PstNI | CAGNNNCTG | 1 cut(s) | 92 |
| SaqAI | TTAA | 1 cut(s) | 185 |
| SatI | GCNGC | 3 cut(s) | 6, 57, 87 |
| Sau96I | GGNCC | 1 cut(s) | 169 |
| SetI | ASST | 2 cut(s) | 33, 231 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| SfuI | TTCGAA | 1 cut(s) | 195 |
| SgrAI | CRCCGGYG | 1 cut(s) | 220 |
| SinI | GGWCC | 1 cut(s) | 169 |
| SmlI | CTYRAG | 1 cut(s) | 208 |
| SmoI | CTYRAG | 1 cut(s) | 208 |
| SspMI | CTAG | 1 cut(s) | 81 |
| StyI | CCWWGG | 1 cut(s) | 80 |
| TaiI | ACGT | 1 cut(s) | 231 |
| TaqI | TCGA | 2 cut(s) | 72, 195 |
| TaqII | GACCGA | 1 cut(s) | 116 |
| Tru1I | TTAA | 1 cut(s) | 185 |
| Tru9I | TTAA | 1 cut(s) | 185 |
| TseI | GCWGC | 3 cut(s) | 5, 56, 86 |
| TspDTI | ATGAA | 2 cut(s) | 266, 273 |
| VpaK11BI | GGWCC | 1 cut(s) | 169 |
| XmaJI | CCTAGG | 1 cut(s) | 80 |
| XspI | CTAG | 1 cut(s) | 81 |