transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 321 |
| AcsI | RAATTY | 2 cut(s) | 8, 137 |
| AfaI | GTAC | 1 cut(s) | 30 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 321 |
| AgsI | TTSAA | 5 cut(s) | 8, 13, 143, 217, 277 |
| AluBI | AGCT | 1 cut(s) | 61 |
| AluI | AGCT | 1 cut(s) | 61 |
| Ama87I | CYCGRG | 2 cut(s) | 70, 339 |
| AoxI | GGCC | 3 cut(s) | 66, 285, 312 |
| ApeKI | GCWGC | 2 cut(s) | 35, 116 |
| ApoI | RAATTY | 2 cut(s) | 8, 137 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 221 |
| AsuC2I | CCSGG | 2 cut(s) | 340, 341 |
| AvaI | CYCGRG | 2 cut(s) | 70, 339 |
| BbsI | GAAGAC | 1 cut(s) | 204 |
| BbvI | GCAGC | 2 cut(s) | 47, 103 |
| BccI | CCATC | 2 cut(s) | 59, 257 |
| BceAI | ACGGC | 1 cut(s) | 129 |
| BciVI | GTATCC | 1 cut(s) | 110 |
| BcnI | CCSGG | 2 cut(s) | 340, 341 |
| BfaI | CTAG | 1 cut(s) | 335 |
| BfuI | GTATCC | 1 cut(s) | 110 |
| BisI | GCNGC | 2 cut(s) | 36, 117 |
| BlsI | GCNGC | 2 cut(s) | 37, 118 |
| Bme1390I | CCNGG | 2 cut(s) | 340, 341 |
| BmeT110I | CYCGRG | 2 cut(s) | 70, 339 |
| BmrFI | CCNGG | 2 cut(s) | 340, 341 |
| BoxI | GACNNNNGTC | 1 cut(s) | 251 |
| BpiI | GAAGAC | 1 cut(s) | 204 |
| BpuMI | CCSGG | 2 cut(s) | 340, 341 |
| BsaJI | CCNNGG | 5 cut(s) | 69, 111, 121, 181, 339 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 321 |
| Bse1I | ACTGG | 2 cut(s) | 36, 153 |
| Bse3DI | GCAATG | 1 cut(s) | 86 |
| BseDI | CCNNGG | 5 cut(s) | 69, 111, 121, 181, 339 |
| BseGI | GGATG | 1 cut(s) | 268 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 321 |
| BseMI | GCAATG | 1 cut(s) | 86 |
| BseNI | ACTGG | 2 cut(s) | 36, 153 |
| BseXI | GCAGC | 2 cut(s) | 47, 103 |
| BshFI | GGCC | 3 cut(s) | 68, 287, 314 |
| BsiHKCI | CYCGRG | 2 cut(s) | 70, 339 |
| BsiSI | CCGG | 1 cut(s) | 340 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 321 |
| BsnI | GGCC | 3 cut(s) | 68, 287, 314 |
| BsoBI | CYCGRG | 2 cut(s) | 70, 339 |
| Bsp19I | CCATGG | 1 cut(s) | 181 |
| BspANI | GGCC | 3 cut(s) | 68, 287, 314 |
| BsrDI | GCAATG | 1 cut(s) | 86 |
| BsrI | ACTGG | 2 cut(s) | 36, 153 |
| BssECI | CCNNGG | 5 cut(s) | 69, 111, 121, 181, 339 |
| BssT1I | CCWWGG | 2 cut(s) | 121, 181 |
| Bst4CI | ACNGT | 1 cut(s) | 348 |
| BstDSI | CCRYGG | 2 cut(s) | 111, 181 |
| BstF5I | GGATG | 1 cut(s) | 268 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 251 |
| BstSCI | CCNGG | 2 cut(s) | 338, 339 |
| BstV1I | GCAGC | 2 cut(s) | 47, 103 |
| BstV2I | GAAGAC | 1 cut(s) | 204 |
| BsuI | GTATCC | 1 cut(s) | 110 |
| BsuRI | GGCC | 3 cut(s) | 68, 287, 314 |
| BtgI | CCRYGG | 2 cut(s) | 111, 181 |
| BtsCI | GGATG | 1 cut(s) | 268 |
| Cfr9I | CCCGGG | 1 cut(s) | 339 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviAII | CATG | 2 cut(s) | 182, 244 |
| CviJI | RGCY | 8 cut(s) | 61, 68, 116, 186, 287, 314, 325, 338 |
| CviKI_1 | RGCY | 8 cut(s) | 61, 68, 116, 186, 287, 314, 325, 338 |
| CviQI | GTAC | 1 cut(s) | 29 |
| Eco130I | CCWWGG | 2 cut(s) | 121, 181 |
| Eco147I | AGGCCT | 1 cut(s) | 287 |
| Eco88I | CYCGRG | 2 cut(s) | 70, 339 |
| EcoRI | GAATTC | 1 cut(s) | 8 |
| EcoT14I | CCWWGG | 2 cut(s) | 121, 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 88 |
| ErhI | CCWWGG | 2 cut(s) | 121, 181 |
| FaeI | CATG | 2 cut(s) | 185, 247 |
| FaiI | YATR | 6 cut(s) | 168, 183, 194, 245, 272, 305 |
| FatI | CATG | 2 cut(s) | 181, 243 |
| Fnu4HI | GCNGC | 2 cut(s) | 36, 117 |
| FokI | GGATG | 1 cut(s) | 275 |
| Fsp4HI | GCNGC | 2 cut(s) | 36, 117 |
| FspBI | CTAG | 1 cut(s) | 335 |
| GluI | GCNGC | 2 cut(s) | 36, 117 |
| HaeIII | GGCC | 3 cut(s) | 68, 287, 314 |
| HapII | CCGG | 1 cut(s) | 340 |
| Hin1II | CATG | 2 cut(s) | 185, 247 |
| HpaII | CCGG | 1 cut(s) | 340 |
| Hpy188I | TCNGA | 1 cut(s) | 174 |
| HpyAV | CCTTC | 2 cut(s) | 211, 277 |
| HpyCH4III | ACNGT | 1 cut(s) | 348 |
| HpyCH4V | TGCA | 1 cut(s) | 86 |
| Hsp92II | CATG | 2 cut(s) | 185, 247 |
| LmnI | GCTCC | 1 cut(s) | 58 |
| LpnPI | CCDG | 2 cut(s) | 17, 166 |
| Lsp1109I | GCAGC | 2 cut(s) | 47, 103 |
| MaeI | CTAG | 1 cut(s) | 335 |
| MaeIII | GTNAC | 1 cut(s) | 159 |
| MboII | GAAGA | 2 cut(s) | 209, 289 |
| MluCI | AATT | 3 cut(s) | 8, 13, 137 |
| MnlI | CCTC | 3 cut(s) | 79, 102, 220 |
| Mph1103I | ATGCAT | 1 cut(s) | 88 |
| MroXI | GAANNNNTTC | 1 cut(s) | 221 |
| MspI | CCGG | 1 cut(s) | 340 |
| MspR9I | CCNGG | 2 cut(s) | 340, 341 |
| NciI | CCSGG | 2 cut(s) | 340, 341 |
| NcoI | CCATGG | 1 cut(s) | 181 |
| NlaIII | CATG | 2 cut(s) | 185, 247 |
| NsiI | ATGCAT | 1 cut(s) | 88 |
| PceI | AGGCCT | 1 cut(s) | 287 |
| PdmI | GAANNNNTTC | 1 cut(s) | 221 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 321 |
| PkrI | GCNGC | 2 cut(s) | 37, 118 |
| PshAI | GACNNNNGTC | 1 cut(s) | 251 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SatI | GCNGC | 2 cut(s) | 36, 117 |
| ScrFI | CCNGG | 2 cut(s) | 340, 341 |
| SetI | ASST | 2 cut(s) | 63, 231 |
| SmaI | CCCGGG | 1 cut(s) | 341 |
| Sse9I | AATT | 3 cut(s) | 8, 13, 137 |
| SseBI | AGGCCT | 1 cut(s) | 287 |
| SspMI | CTAG | 1 cut(s) | 335 |
| StuI | AGGCCT | 1 cut(s) | 287 |
| StyD4I | CCNGG | 2 cut(s) | 338, 339 |
| StyI | CCWWGG | 2 cut(s) | 121, 181 |
| TaaI | ACNGT | 1 cut(s) | 348 |
| TaqI | TCGA | 2 cut(s) | 225, 239 |
| TaqII | GACCGA | 1 cut(s) | 146 |
| TasI | AATT | 3 cut(s) | 8, 13, 137 |
| TatI | WGTACW | 1 cut(s) | 28 |
| TseI | GCWGC | 2 cut(s) | 35, 116 |
| TspDTI | ATGAA | 2 cut(s) | 150, 296 |
| TspMI | CCCGGG | 1 cut(s) | 339 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 321 |
| XapI | RAATTY | 2 cut(s) | 8, 137 |
| XmaI | CCCGGG | 1 cut(s) | 339 |
| XmnI | GAANNNNTTC | 1 cut(s) | 221 |
| XspI | CTAG | 1 cut(s) | 335 |
| Zsp2I | ATGCAT | 1 cut(s) | 88 |