transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 438, 456 |
| AciI | CCGC | 2 cut(s) | 175, 713 |
| AclWI | GGATC | 3 cut(s) | 413, 1490, 1566 |
| AcsI | RAATTY | 1 cut(s) | 261 |
| AfaI | GTAC | 5 cut(s) | 96, 326, 362, 789, 926 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 265, 278, 468, 485, 1300 |
| AflII | CTTAAG | 1 cut(s) | 782 |
| AflIII | ACRYGT | 1 cut(s) | 357 |
| AjnI | CCWGG | 1 cut(s) | 967 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 654, 686 |
| Alw21I | GWGCWC | 1 cut(s) | 91 |
| Alw26I | GTCTC | 2 cut(s) | 848, 1242 |
| Alw44I | GTGCAC | 1 cut(s) | 87 |
| AlwI | GGATC | 3 cut(s) | 413, 1490, 1566 |
| Ama87I | CYCGRG | 1 cut(s) | 461 |
| AoxI | GGCC | 4 cut(s) | 230, 407, 714, 1175 |
| ApaLI | GTGCAC | 1 cut(s) | 87 |
| ApoI | RAATTY | 1 cut(s) | 261 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 992, 1024 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1415 |
| AspS9I | GGNCC | 1 cut(s) | 231 |
| AsuC2I | CCSGG | 3 cut(s) | 365, 444, 1500 |
| AsuHPI | GGTGA | 3 cut(s) | 243, 467, 1055 |
| AvaI | CYCGRG | 1 cut(s) | 461 |
| BaeGI | GKGCMC | 1 cut(s) | 91 |
| BbsI | GAAGAC | 2 cut(s) | 1155, 1367 |
| Bbv12I | GWGCWC | 1 cut(s) | 91 |
| BccI | CCATC | 5 cut(s) | 637, 703, 1034, 1378, 1549 |
| BceAI | ACGGC | 1 cut(s) | 1340 |
| BciT130I | CCWGG | 1 cut(s) | 969 |
| BcnI | CCSGG | 3 cut(s) | 365, 444, 1500 |
| BcoDI | GTCTC | 2 cut(s) | 848, 1242 |
| BfaI | CTAG | 3 cut(s) | 609, 803, 807 |
| BfmI | CTRYAG | 1 cut(s) | 650 |
| BfrI | CTTAAG | 1 cut(s) | 782 |
| BisI | GCNGC | 1 cut(s) | 714 |
| BlsI | GCNGC | 1 cut(s) | 715 |
| Bme1390I | CCNGG | 4 cut(s) | 365, 444, 969, 1500 |
| BmeT110I | CYCGRG | 1 cut(s) | 461 |
| BmgT120I | GGNCC | 1 cut(s) | 231 |
| BmiI | GGNNCC | 3 cut(s) | 233, 270, 963 |
| BmrFI | CCNGG | 4 cut(s) | 365, 444, 969, 1500 |
| BmsI | GCATC | 1 cut(s) | 257 |
| BpiI | GAAGAC | 2 cut(s) | 1155, 1367 |
| BpuEI | CTTGAG | 3 cut(s) | 913, 1236, 1265 |
| BpuMI | CCSGG | 3 cut(s) | 365, 444, 1500 |
| BsaJI | CCNNGG | 3 cut(s) | 291, 956, 1125 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 817, 847 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 265, 278, 468, 485, 1300 |
| Bse3DI | GCAATG | 1 cut(s) | 386 |
| BseBI | CCWGG | 1 cut(s) | 969 |
| BseDI | CCNNGG | 3 cut(s) | 291, 956, 1125 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 265, 278, 468, 485, 1300 |
| BseMI | GCAATG | 1 cut(s) | 386 |
| BseMII | CTCAG | 1 cut(s) | 406 |
| BseRI | GAGGAG | 1 cut(s) | 24 |
| BseSI | GKGCMC | 1 cut(s) | 91 |
| BshFI | GGCC | 4 cut(s) | 232, 409, 716, 1177 |
| BsiHKAI | GWGCWC | 1 cut(s) | 91 |
| BsiHKCI | CYCGRG | 1 cut(s) | 461 |
| BsiSI | CCGG | 3 cut(s) | 365, 444, 1499 |
| BslFI | GGGAC | 1 cut(s) | 810 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 265, 278, 468, 485, 1300 |
| BsmAI | GTCTC | 2 cut(s) | 848, 1242 |
| BsmFI | GGGAC | 1 cut(s) | 810 |
| BsmI | GAATGC | 1 cut(s) | 1078 |
| BsnI | GGCC | 4 cut(s) | 232, 409, 716, 1177 |
| BsoBI | CYCGRG | 1 cut(s) | 461 |
| Bsp1286I | GDGCHC | 1 cut(s) | 91 |
| Bsp1407I | TGTACA | 1 cut(s) | 924 |
| Bsp143I | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| Bsp19I | CCATGG | 1 cut(s) | 291 |
| BspACI | CCGC | 2 cut(s) | 175, 713 |
| BspANI | GGCC | 4 cut(s) | 232, 409, 716, 1177 |
| BspCNI | CTCAG | 1 cut(s) | 405 |
| BspHI | TCATGA | 1 cut(s) | 1138 |
| BspLI | GGNNCC | 3 cut(s) | 233, 270, 963 |
| BspPI | GGATC | 3 cut(s) | 413, 1490, 1566 |
| BspTI | CTTAAG | 1 cut(s) | 782 |
| BsrDI | GCAATG | 1 cut(s) | 386 |
| BsrGI | TGTACA | 1 cut(s) | 924 |
| BssECI | CCNNGG | 3 cut(s) | 291, 956, 1125 |
| BssMI | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| BssT1I | CCWWGG | 3 cut(s) | 291, 956, 1125 |
| Bst2UI | CCWGG | 1 cut(s) | 969 |
| Bst4CI | ACNGT | 1 cut(s) | 509 |
| BstAFI | CTTAAG | 1 cut(s) | 782 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 593 |
| BstAUI | TGTACA | 1 cut(s) | 924 |
| BstC8I | GCNNGC | 3 cut(s) | 300, 304, 779 |
| BstDEI | CTNAG | 2 cut(s) | 392, 1027 |
| BstDSI | CCRYGG | 1 cut(s) | 291 |
| BstEII | GGTNACC | 1 cut(s) | 524 |
| BstKTI | GATC | 5 cut(s) | 421, 753, 986, 1498, 1561 |
| BstMAI | GTCTC | 2 cut(s) | 848, 1242 |
| BstMBI | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 312, 593, 602 |
| BstNI | CCWGG | 1 cut(s) | 969 |
| BstNSI | RCATGY | 3 cut(s) | 130, 361, 931 |
| BstPI | GGTNACC | 1 cut(s) | 524 |
| BstSCI | CCNGG | 4 cut(s) | 363, 442, 967, 1498 |
| BstSFI | CTRYAG | 1 cut(s) | 650 |
| BstSLI | GKGCMC | 1 cut(s) | 91 |
| BstV2I | GAAGAC | 2 cut(s) | 1155, 1367 |
| BstX2I | RGATCY | 2 cut(s) | 1495, 1558 |
| BstYI | RGATCY | 2 cut(s) | 1495, 1558 |
| BsuRI | GGCC | 4 cut(s) | 232, 409, 716, 1177 |
| BtgI | CCRYGG | 1 cut(s) | 291 |
| Cac8I | GCNNGC | 3 cut(s) | 300, 304, 779 |
| CciI | TCATGA | 1 cut(s) | 1138 |
| Cfr13I | GGNCC | 1 cut(s) | 231 |
| CsiI | ACCWGGT | 1 cut(s) | 967 |
| Csp6I | GTAC | 5 cut(s) | 95, 325, 361, 788, 925 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 831, 866 |
| CviQI | GTAC | 5 cut(s) | 95, 325, 361, 788, 925 |
| DdeI | CTNAG | 2 cut(s) | 392, 1027 |
| DpnI | GATC | 5 cut(s) | 420, 752, 985, 1497, 1560 |
| DpnII | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| DraI | TTTAAA | 1 cut(s) | 1600 |
| Eco130I | CCWWGG | 3 cut(s) | 291, 956, 1125 |
| Eco88I | CYCGRG | 1 cut(s) | 461 |
| Eco91I | GGTNACC | 1 cut(s) | 524 |
| EcoO109I | RGGNCCY | 1 cut(s) | 231 |
| EcoO65I | GGTNACC | 1 cut(s) | 524 |
| EcoRII | CCWGG | 1 cut(s) | 967 |
| EcoT14I | CCWWGG | 3 cut(s) | 291, 956, 1125 |
| ErhI | CCWWGG | 3 cut(s) | 291, 956, 1125 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1425, 1457 |
| FaqI | GGGAC | 1 cut(s) | 810 |
| Fnu4HI | GCNGC | 1 cut(s) | 714 |
| Fsp4HI | GCNGC | 1 cut(s) | 714 |
| FspBI | CTAG | 3 cut(s) | 609, 803, 807 |
| GluI | GCNGC | 1 cut(s) | 714 |
| HaeIII | GGCC | 4 cut(s) | 232, 409, 716, 1177 |
| HapII | CCGG | 3 cut(s) | 365, 444, 1499 |
| HindIII | AAGCTT | 6 cut(s) | 300, 779, 1053, 1475, 1504, 1605 |
| HinfI | GANTC | 5 cut(s) | 211, 282, 472, 499, 1151 |
| HpaII | CCGG | 3 cut(s) | 365, 444, 1499 |
| HphI | GGTGA | 3 cut(s) | 243, 467, 1055 |
| Hpy166II | GTNNAC | 6 cut(s) | 89, 325, 347, 512, 724, 925 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 8 cut(s) | 266, 461, 674, 1139, 1282, 1321, 1387, 1614 |
| Hpy8I | GTNNAC | 6 cut(s) | 89, 325, 347, 512, 724, 925 |
| HpyAV | CCTTC | 8 cut(s) | 176, 222, 897, 1102, 1167, 1207, 1318, 1384 |
| HpyCH4III | ACNGT | 1 cut(s) | 509 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 89, 160, 193, 384, 557, 1222, 1401 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 312, 593, 602 |
| HpyF3I | CTNAG | 2 cut(s) | 392, 1027 |
| Kzo9I | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| LmnI | GCTCC | 5 cut(s) | 268, 295, 584, 610, 961 |
| LpnPI | CCDG | 5 cut(s) | 378, 457, 954, 981, 1512 |
| LweI | GCATC | 1 cut(s) | 257 |
| MabI | ACCWGGT | 1 cut(s) | 967 |
| MaeI | CTAG | 3 cut(s) | 609, 803, 807 |
| MaeIII | GTNAC | 3 cut(s) | 524, 949, 1008 |
| MalI | GATC | 5 cut(s) | 420, 752, 985, 1497, 1560 |
| MboI | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| MfeI | CAATTG | 2 cut(s) | 1295, 1546 |
| MflI | RGATCY | 2 cut(s) | 1495, 1558 |
| MhlI | GDGCHC | 1 cut(s) | 91 |
| MlyI | GAGTC | 2 cut(s) | 291, 1145 |
| MmeI | TCCRAC | 1 cut(s) | 1111 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1415 |
| MseI | TTAA | 4 cut(s) | 783, 815, 1581, 1599 |
| MspCI | CTTAAG | 1 cut(s) | 782 |
| MspI | CCGG | 3 cut(s) | 365, 444, 1499 |
| MspR9I | CCNGG | 4 cut(s) | 365, 444, 969, 1500 |
| MunI | CAATTG | 2 cut(s) | 1295, 1546 |
| Mva1269I | GAATGC | 1 cut(s) | 1078 |
| MvaI | CCWGG | 1 cut(s) | 969 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 312, 593, 602 |
| NciI | CCSGG | 3 cut(s) | 365, 444, 1500 |
| NcoI | CCATGG | 1 cut(s) | 291 |
| NdeII | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| NlaIV | GGNNCC | 3 cut(s) | 233, 270, 963 |
| NmuCI | GTSAC | 1 cut(s) | 1008 |
| NspI | RCATGY | 3 cut(s) | 130, 361, 931 |
| PagI | TCATGA | 1 cut(s) | 1138 |
| PciI | ACATGT | 1 cut(s) | 357 |
| PctI | GAATGC | 1 cut(s) | 1078 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1415 |
| PfeI | GAWTC | 3 cut(s) | 211, 472, 499 |
| PfoI | TCCNGGA | 1 cut(s) | 1498 |
| PkrI | GCNGC | 1 cut(s) | 715 |
| PleI | GAGTC | 2 cut(s) | 290, 1145 |
| PpsI | GAGTC | 2 cut(s) | 290, 1145 |
| PscI | ACATGT | 1 cut(s) | 357 |
| PsiI | TTATAA | 2 cut(s) | 438, 456 |
| Psp6I | CCWGG | 1 cut(s) | 967 |
| PspEI | GGTNACC | 1 cut(s) | 524 |
| PspGI | CCWGG | 1 cut(s) | 967 |
| PspN4I | GGNNCC | 3 cut(s) | 233, 270, 963 |
| PspPI | GGNCC | 1 cut(s) | 231 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 908, 940 |
| PsuI | RGATCY | 2 cut(s) | 1495, 1558 |
| RsaI | GTAC | 5 cut(s) | 96, 326, 362, 789, 926 |
| RsaNI | GTAC | 5 cut(s) | 95, 325, 361, 788, 925 |
| SaqAI | TTAA | 4 cut(s) | 783, 815, 1581, 1599 |
| SatI | GCNGC | 1 cut(s) | 714 |
| Sau3AI | GATC | 5 cut(s) | 418, 750, 983, 1495, 1558 |
| Sau96I | GGNCC | 1 cut(s) | 231 |
| SchI | GAGTC | 2 cut(s) | 291, 1145 |
| ScrFI | CCNGG | 4 cut(s) | 365, 444, 969, 1500 |
| SduI | GDGCHC | 1 cut(s) | 91 |
| SexAI | ACCWGGT | 1 cut(s) | 967 |
| SfaNI | GCATC | 1 cut(s) | 257 |
| SfcI | CTRYAG | 1 cut(s) | 650 |
| SmlI | CTYRAG | 5 cut(s) | 17, 782, 892, 1251, 1280 |
| SmoI | CTYRAG | 5 cut(s) | 17, 782, 892, 1251, 1280 |
| SsiI | CCGC | 2 cut(s) | 175, 713 |
| SspMI | CTAG | 3 cut(s) | 609, 803, 807 |
| StyD4I | CCNGG | 4 cut(s) | 363, 442, 967, 1498 |
| StyI | CCWWGG | 3 cut(s) | 291, 956, 1125 |
| TaaI | ACNGT | 1 cut(s) | 509 |
| TatI | WGTACW | 1 cut(s) | 924 |
| TauI | GCSGC | 1 cut(s) | 716 |
| TfiI | GAWTC | 3 cut(s) | 211, 472, 499 |
| Tru1I | TTAA | 4 cut(s) | 783, 815, 1581, 1599 |
| Tru9I | TTAA | 4 cut(s) | 783, 815, 1581, 1599 |
| TseFI | GTSAC | 1 cut(s) | 1008 |
| Tsp45I | GTSAC | 1 cut(s) | 1008 |
| TspDTI | ATGAA | 7 cut(s) | 39, 95, 885, 1242, 1319, 1418, 1443 |
| TspGWI | ACGGA | 1 cut(s) | 353 |
| Vha464I | CTTAAG | 1 cut(s) | 782 |
| VneI | GTGCAC | 1 cut(s) | 87 |
| XapI | RAATTY | 1 cut(s) | 261 |
| XceI | RCATGY | 3 cut(s) | 130, 361, 931 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1415 |
| XspI | CTAG | 3 cut(s) | 609, 803, 807 |