Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000310

Physical Location & Seq

Genomic Coordinates Reverse (-)

15063988 .. 15075018

Gene Structure 11031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G131600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4614 bp

ATGGCGGACCACGAGCAGCCAATTGGGGCCGTCGGGAGGCGGCGGAACCGAGGAGCTGAGGCGTCGGCGCGTGCCGGAGCCCTCGAGCGCCTGAAAGCTCTTCGCCATGGCGGCCGCCGATCCGAAGCTGGTGGGTTCCAGATCAAGATGGAGAACCCGATTTACGACACGGTCGGTGACGACGAGTATGACGCGCTTGTCGCGAAACGACGCGAAGAGGTTCGAGGTTTCATTGTCGACGACGATGGCCTGGGGTATTGCGATGAGGGCGAGGAAGAGGATTGGACCCGGGCTGGGCCGTCGTCCGATGAGTCTGACGGCGACGATAGGCCGAAGAGGAGGAGATCCGAGAAAAAGGATAAGGACAAGGAGAAGGAGGCTCGGCCCAAAAAGCCCAATTCTTCGCTTACGGCTGCGGCGGCGATGATGGGGAAGCAGAGGCTGTCTTCGATGTTTACTTCATCGGTGTTTGGGAAAACTAGAGATAATGAGAGGGGGAAAGGGTTGAACTGCGATAGTATTGTGGATGATGTGATTGCAGAGTTTGCGCCTGACGAGGAAGACAGAGAGAAACGGAGGAGGGGGCATTCGAACAAGAGTTTCATGCCGATTTCTTGTGTTAAGAGTGAGAGAGGGTCTGATGGTGGTGTTGGTTTAACAAGGAGGGCTGAATTGGATGTAGTTGTTGCAAATGGTAGTGATTCTGTGCTGATTAATGAAGGGGCTAACGAAAATGAGGCCAAGAAGGACTTGGGTTTTGAACTTGATGATCCTCCAAGTGAGCAAACTCATAATGTTTCAGAAAATGGAGGGGTAATTGAGGAGAAAAGGGTGGATTTTGTTGAGGAGAAAGTGGAAGCTGTGGTTAAGAAGGAAGAGGTTTTTACATTGAATGCGAAGATTAAGGAAGATAATAAGGACCCGGCATTGAGCGCTATGGCTGGATGGAAGGCAGTGAGAACTGGAGGGGATGGGGATATTTGTAGTGGTACTGTGGAAGTCAACAGTGGCTCAAATGGTGAAGAGACTTCAGATTTTGATCTGGAAGAAGATGGGTCACTGCCTTTTTACATGCTTGATGCTTACGAAGAGTTATATGGAGCTAATATAGGCACCCTTTATCTATTTGGGAAGGTAAAAGCAGGAAGTACATACCAGAGTTGTTGTATGGTTGTAAAGAACATGCAGAGATGTGTCTATGCAATTCCAGACAGTTCTGTATTTCACACTGATGAAATGATGAAGCTTGAAAAGGATGCTGAAGAGTCAAGGATTTCTTCCACAGATTTCCGTAAGAAGCTGCATGATGTGGCTTCAGGTTTGAAAAATGACATAGCAAAGAAGTTGTTGGATCTCAATGTATCAAATTTTAGCATGGCACCGGTTAAGAGGAAATACGCATTTGAGCGATCTGACATACCTGCAGGAGAGAATTATGTACTTAAGATCAATTATCCATTCAAGGATCCCCCACTTCCAGCAGATCTAAAAGGCGAAACTTTCTGTGCTCTTCTAGGAACTCATTGCAGCGCGTTGGAGCTTTTCCTTGTTAAAAGGAAGATAAAAGGGCCTTCCTGGCTATCAGTTTCAAAGTTTTCTGTCTGCCCAGCCCCAAAACGGGTGAGTTGGTGCAAGTTTGAGGTGATAGTTGATTCTGCAAAAGACATAGGGGTTTCAAATTGCCCAAAGAAAACTGCAGAGAGTCCCCCAGTGGTTGTAACTGCAATAAGTTTAAAAACTATTATCAACCAAAAGCATAATGTTAATGAAATTGTCTCTGCATCTGTTATCTGCTGTCACAAGGCCAAGATTGACACTCCCGTGTTGACCTCAGAATGGACAAGACCTGGTATGCTGAGCCATTTTACTGTTATCCGTAAGCTTGATGGAGGCATATTTCCAATGGGATTCACTAAAGAGGCTACGGATAAGAACTCTAAAGCTGGATCAAATGTTTTAAGCATTGAAAGCAGTGAAAGGGCTTTGCTAAACCGTTTGATGATTGAATTATACAAGTTGGATAGCGATGTTCTTGTTGGACACAATATATCTGGGTTTGACCTGGATGCCCTTCTCCACAGAGCTCAGGTTTGCAGAGTGCCAAGCAGCATGTGGTCCAAAATAGGCCGCCTCAAGCGTTCTGTGATGCCTAAGCTTGCAAAAGGAAGCACCATTTTTGGGTCTGGAGCAAGTCCAGGGATCATGGCCTGCATTTCTGGTCGCCTTTTGTGTGATACATACTTGTGTTCCCGTGACTTATTGAAGGAGGTTAGCTATTCTTTGACACAACTTGCAAAGACTCAGCTGAACAAAGACCGAAAGGAGATCATGCCACATGATATTCCCAGAATGTTTCAAAAATCAGAGTTTCTCATGGAACTTATTGAATATGGAGAGACAGATGCATGGCTGTCTATGGAACTCATGTTTCATTTGAGTGTTCTTCCCCTCACACGCCAGCTGACTAAGATAAGTGGTAACCTGTGGGGAAAAACTCTACAAGGTGCTAGGGCACAAAGAGTAGAATATCTTTTACTGCATGCTTTCCATGCAAAGAAGTATATTGTTCCAGACAAGTATCCTCATCCAAAAGAAACAAAATTGACAAAGCGGAGAATAGATAATGGTTCTGATGAGAGAAATGTTGATGAGTTGGATGTAAACGATGTAAATATTGATAGTGATGCACATAGTGGTCATGGAAAAGGCAAAAAAGGTCCTGCCTATGCAGGTGGATTGGTCTTGGAGCCAAAGAGAGGTTTATACGACAAGTATATATTACTTCTGGACTTCAATAGTCTTTACCCGTCTATTATTCAGGAATACAATATATGCTTCACAACAGTGGAGAGATCTCAGGAAGGATTGGCTCCTCGTTTGCCATCTAGTAAGACAACTGGACTTCTACCTGAGTTGTTAAAAGATCTAGTTGAAAGGAGGAGAAACGTGAAGAAATGGATGAAGACTGCATCTGGTCTCAAGATTCAGCAACTTGACATTCAACAGCAAGCTCTAAAGCTGACTGCAAACAGTATGTATGGATGCTTGGGGTTTTCAAACTCGAGATTTTATGCAAAACCACTGGCAGAGCTTATAACACTGCAAGGGAGGGAGATTCTACAAAGTACCGTTGATCTTGTTCAAAACAATTTGAACTTAGAGGTAATCTATGGTGATACAGATTCAATAATGATTTACAGTGGACTGGATGATATTGCGAAAGCAAAAGCAATTGCATGGAAAGTCATCCAAGAGGTTAACAAAAAGTACAGATGTTTAGAAATTGATCTTGACGGTTTGTACAAGAGAATGCTGCTTCTCAAGAAAAAGAAATATGCAGCTGTAAAGGTGCAATTCAAGAATGAGACACCATATGAGGTTATTGAACGTAAGGGCCTCGATATGGTTCGCCGAGACTGGAGCTTACTTTCAAAGGAACTGGGAGATTTCTGCCTAAGTCAGATTTTGTCAGGAGGGTCATGTGAGGATGTTGTTGAATCAATTCATAACTCTCTGATTAAGGTGCAAGAGGACATGAGAAAAGGACAAGTCGCCCTTGAGAAATATATCATCACCAAGACATTAACTAAACCACCTGAAGCATACCCAGATGCCAAAAACCAACCACATGTTCAAGTGGCCCAAAGATTGAAGCAAAGTGGTTATTCTACGGGTTGCTCTGTTGGCGATACAGTCCCCTATATCATTTGCTGTGAGCAGGGGACCGGTTCAGTTAATTCAACTGGTATTGCTCAACGTGCTAGACATCCTGATGAATTAAAACGAGAAGATGGGAAATGGATGATTGACATTGATTACTACTTGGCCCAGCAGATTCATCCTGTGGTATCACGTCTTTGTGCTTCAATTCAGGGTACCAGCCCCGAACGCTTAGCTGATTGTTTAGGGCTTGACTCTTCTAAGTTCAAAGTTAATTCAAGTGAAGCTGTCAGGGACGACCCTACCAGCTTGTCCCTTGCTGTTGACGATGAAGAGAGATATCAGGGTTGTGAGCCTTTGATCTTGGCTTGTCCTAGCTGCTCTGGTACTTTTGATTGTCCATCTATCTTGAATTCCATTTCGAAGTCAATCACTGGAAAGTCAACAAGGCCACAAGCTGAGGAATCTACCATCGATTTTTGGCATAAACTGCGTTGTCCAAAATGTCCAGGGGAAGGTGATGTGGGCAGACTGTCTCCTGCAATGATAGCCAACCAGGTGAAAAGGCAAGCAGACAGTTTTGTTTCAATGTACTATAAGGGCACAATGACGTGTGATGATGACACTTGCAAGTACAACACACGAAGTCTCAATCTTCAGCTTGTTGGTGATTCTGAGAGAGGAACAGTTTGTCCAGACTATCCTCGCTGCAATGGACGTCTTGTAAGAAAGTACACGGAAGCAGATCTGTACAAGCAGCTCTCATTTTTCTGCCATGTCTTGGATACAGTACGCTGCATTGAAAAGATGGAGGCTAGCACTAGATTGCCACTAGAAATGGAGTTGGCCAAAATTCGGCCGATTGTGGATTTGGCTGCCTCAACAGTTCAAAGGATTCGGGACCGTTGTGCCTACGGATGGATACAGCTGCAAGATTTTTGTGTTACAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0003896 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006270 GO:0006271 GO:0006272 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009965 GO:0009987 GO:0010016 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0022616 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0032993 GO:0033554 GO:0034061 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051716 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0071897 GO:0090304 GO:0097747 GO:0099402 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 DNA_pol_alpha_N zf-DNA_Pol

Protein Analysis

1538

Amino Acids

171.38

Weight (kDa)

7.07

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67100 AT5G67100
fragaria_vesca	FvH4_1g20001 FvH4_1g22730 FvH4_1g22730 FvH4_1g22730 FvH4_6g13861 FvH4_6g33603
malus_domestica	MD02G1174100.v1.1 MD02G1174200.v1.1 MD02G1174400.v1.1 MD15G1285400.v1.1
prunus_persica	Prupe.7G131600_v2.0.a1
pyrus_communis	pycom02g14040 pycom02g14050 pycom02g14060 pycom02g14070 pycom15g24830 pycom15g24840
rosa_chinensis	RchiOBHm_Chr2g0109901 RchiOBHm_Chr2g0117021 RchiOBHm_Chr2g0168121 RchiOBHm_Chr4g0394581
rosa_laevigata	RLG00000001621 RLG00000001943 RLG00000003450 RLG00000006116 RLG00000006535 RLG00000008147 RLG00000009121 RLG00000010680 RLG00000013987 RLG00000017585 RLG00000017603 RLG00000017638 RLG00000017923 RLG00000018320 RLG00000021520 RLG00000022613 RLG00000022614 RLG00000023966 RLG00000025998 RLG00000027760 RLG00000033421
rosa_multiflora	Rmu_co7985806.1_g000001 Rmu_co8250293.1_g000001 Rmu_co8353517.1_g000001 Rmu_sc0000697.1_g000011 Rmu_sc0000776.1_g000079 Rmu_sc0001023.1_g000057 Rmu_sc0001266.1_g000019 Rmu_sc0002711.1_g000010 Rmu_sc0002731.1_g000005 Rmu_sc0003002.1_g000047 Rmu_sc0003030.1_g000002 Rmu_sc0003672.1_g000003 Rmu_sc0004168.1_g000062 Rmu_sc0004180.1_g000003 Rmu_sc0009205.1_g000008 Rmu_sc0011259.1_g000001 Rmu_sc0011259.1_g000002 Rmu_sc0027274.1_g000001
rosa_roxburghii	Rroxscaffold_1G00023520 Rroxscaffold_2G00104450 Rroxscaffold_2G00126810 Rroxscaffold_2G00144870 Rroxscaffold_4G00315680 Rroxscaffold_4G00331480 Rroxscaffold_7G00182820
rosa_rugosa	Rorug02G0209600 Rorug04G0130600 Rorug04G0130600 Rorug04G0130700 Rorug05G0230000
rosa_samantha	Rh1AG170000 Rh1CG157700 Rh1CG385600 Rh2AG215100 Rh2AG265500 Rh2BG277300 Rh2CG217600 Rh2CG217700 Rh2DG220600 Rh2DG272800 Rh2DG291800 Rh3AG215700 Rh3BG271700 Rh3DG075200 Rh3DG242600 Rh4AG115400 Rh4AG138100 Rh4AG333600 Rh4BG115100 Rh4BG366300 Rh4CG125400 Rh4CG380400 Rh4DG083500 Rh4DG113200 Rh4DG192900 Rh4DG246300 Rh5AG075000 Rh5BG482300 Rh5CG181200 Rh5CG247200 Rh5CG506900 Rh5DG167600 Rh5DG202900 Rh6AG000500 Rh6AG213400 Rh6BG335800 Rh6CG255700 Rh7AG337500 Rh7BG404500 Rh7BG461500 Rh7CG355600
rosa_wichuraiana	Rw0G019110 Rw2G020950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3095
AarI	CACCTGC	1 cut(s)	2720
AasI	GACNNNNNNGTC	1 cut(s)	197
AatII	GACGTC	1 cut(s)	4381
Acc36I	ACCTGC	2 cut(s)	1429, 2720
Acc65I	GGTACC	1 cut(s)	3875
AccB1I	GGYRCC	3 cut(s)	1112, 1378, 3875
AccB7I	CCANNNNNTGG	1 cut(s)	4441
AccI	GTMKAC	1 cut(s)	237
AccII	CGCG	5 cut(s)	70, 194, 203, 213, 1532
AciI	CCGC	9 cut(s)	5, 40, 43, 111, 115, 416, 419, 2128, 2611
AclWI	GGATC	8 cut(s)	114, 339, 764, 1359, 1460, 1473, 1954, 2207
AcoI	YGGCCR	3 cut(s)	112, 4506, 4517
AcsI	RAATTY	3 cut(s)	1366, 4072, 4512
AcuI	CTGAAG	5 cut(s)	1014, 1281, 1299, 3618, 4301
AcyI	GRCGYC	2 cut(s)	62, 4378
AdeI	CACNNNGTG	1 cut(s)	2693
AfeI	AGCGCT	1 cut(s)	934
AflII	CTTAAG	1 cut(s)	1442
AflIII	ACRYGT	2 cut(s)	3628, 4271
AgeI	ACCGGT	2 cut(s)	1381, 3725
AjiI	CACGTC	2 cut(s)	3854, 4272
AjnI	CCWGG	7 cut(s)	249, 1574, 1846, 2061, 2194, 4168, 4215
AjuI	GAANNNNNNNTTGG	2 cut(s)	3615, 3647
AleI	CACNNNNGTG	2 cut(s)	1820, 2843
AloI	GAACNNNNNNTCC	2 cut(s)	4336, 4368
Alw21I	GWGCWC	2 cut(s)	1510, 2086
Alw26I	GTCTC	8 cut(s)	1019, 1780, 2390, 2981, 3359, 3408, 4200, 4313
AlwI	GGATC	8 cut(s)	114, 339, 764, 1359, 1460, 1473, 1954, 2207
AlwNI	CAGNNNCTG	1 cut(s)	442
Ama87I	CYCGRG	3 cut(s)	83, 288, 3061
Aor51HI	AGCGCT	1 cut(s)	934
ApoI	RAATTY	3 cut(s)	1366, 4072, 4512
ArsI	GACNNNNNNTTYG	2 cut(s)	740, 772
AseI	ATTAAT	1 cut(s)	714
AsiGI	ACCGGT	2 cut(s)	1381, 3725
Asp700I	GAANNNNTTC	2 cut(s)	219, 3501
Asp718I	GGTACC	1 cut(s)	3875
AspLEI	GCGC	6 cut(s)	70, 90, 196, 550, 935, 1532
AsuC2I	CCSGG	3 cut(s)	289, 290, 923
AsuHPI	GGTGA	9 cut(s)	188, 1031, 1633, 1654, 3185, 3565, 4190, 4231, 4340
AsuII	TTCGAA	2 cut(s)	590, 4082
AsuNHI	GCTAGC	1 cut(s)	4475
AvaI	CYCGRG	3 cut(s)	83, 288, 3061
AvaII	GGWCC	7 cut(s)	7, 285, 919, 2115, 2717, 3723, 4561
BaeGI	GKGCMC	2 cut(s)	2515, 4265
BalI	TGGCCA	1 cut(s)	4508
BamHI	GGATCC	1 cut(s)	1465
BanI	GGYRCC	3 cut(s)	1112, 1378, 3875
BanII	GRGCYC	2 cut(s)	82, 2086
BauI	CACGAG	1 cut(s)	11
BbsI	GAAGAC	3 cut(s)	438, 567, 2969
Bbv12I	GWGCWC	2 cut(s)	1510, 2086
BbvCI	CCTCAGC	2 cut(s)	57, 4119
BceAI	ACGGC	4 cut(s)	14, 283, 334, 426
BciT130I	CCWGG	7 cut(s)	251, 1576, 1848, 2063, 2196, 4170, 4217
BciVI	GTATCC	3 cut(s)	2589, 4438, 4575
BcnI	CCSGG	3 cut(s)	289, 290, 923
BcoDI	GTCTC	8 cut(s)	1019, 1780, 2390, 2981, 3359, 3408, 4200, 4313
BfmI	CTRYAG	2 cut(s)	1422, 1695
BfoI	RGCGCY	2 cut(s)	91, 936
BfrI	CTTAAG	1 cut(s)	1442
BfuAI	ACCTGC	2 cut(s)	1429, 2720
BfuI	GTATCC	3 cut(s)	2589, 4438, 4575
BglI	GCCNNNNNGGC	2 cut(s)	111, 1576
BglII	AGATCT	4 cut(s)	1483, 2852, 2923, 4405
BlpI	GCTNAGC	2 cut(s)	1856, 3892
Bme18I	GGWCC	7 cut(s)	7, 285, 919, 2115, 2717, 3723, 4561
BmeT110I	CYCGRG	3 cut(s)	83, 288, 3061
BmgBI	CACGTC	2 cut(s)	3854, 4272
BmrI	ACTGGG	2 cut(s)	1703, 3449
BmtI	GCTAGC	1 cut(s)	4479
BmuI	ACTGGG	2 cut(s)	1703, 3449
BpiI	GAAGAC	3 cut(s)	438, 567, 2969
BpmI	CTGGAG	3 cut(s)	984, 2205, 3439
Bpu10I	CCTNAGC	4 cut(s)	57, 2085, 2151, 4119
Bpu1102I	GCTNAGC	2 cut(s)	1856, 3892
Bpu14I	TTCGAA	2 cut(s)	590, 4082
BpuEI	CTTGAG	4 cut(s)	2117, 2963, 3305, 3578
BpuMI	CCSGG	3 cut(s)	289, 290, 923
Bsa29I	ATCGAT	1 cut(s)	4134
BsaBI	GATNNNNATC	1 cut(s)	1038
BsaHI	GRCGYC	2 cut(s)	62, 4378
BsaI	GGTCTC	1 cut(s)	2981
BsaJI	CCNNGG	6 cut(s)	49, 106, 250, 288, 2195, 4169
BsaWI	WCCGGW	2 cut(s)	1381, 3725
Bse118I	RCCGGY	2 cut(s)	1381, 3725
Bse1I	ACTGG	9 cut(s)	967, 1709, 2902, 3087, 3210, 3422, 3444, 3748, 4099
Bse3DI	GCAATG	3 cut(s)	1522, 4209, 4378
Bse8I	GATNNNNATC	1 cut(s)	1038
BseBI	CCWGG	7 cut(s)	251, 1576, 1848, 2063, 2196, 4170, 4217
BseCI	ATCGAT	1 cut(s)	4134
BseDI	CCNNGG	6 cut(s)	49, 106, 250, 288, 2195, 4169
BseJI	GATNNNNATC	1 cut(s)	1038
BseMI	GCAATG	3 cut(s)	1522, 4209, 4378
BseMII	CTCAG	9 cut(s)	48, 1845, 1847, 2099, 2315, 2870, 2901, 4110, 4326
BseNI	ACTGG	9 cut(s)	967, 1709, 2902, 3087, 3210, 3422, 3444, 3748, 4099
BseRI	GAGGAG	8 cut(s)	66, 352, 355, 592, 836, 860, 2862, 2953
BseSI	GKGCMC	2 cut(s)	2515, 4265
BseX3I	CGGCCG	2 cut(s)	112, 4517
BseYI	CCCAGC	3 cut(s)	293, 1606, 3828
Bsh1236I	CGCG	5 cut(s)	70, 194, 203, 213, 1532
Bsh1285I	CGRYCG	3 cut(s)	115, 174, 4520
BshNI	GGYRCC	3 cut(s)	1112, 1378, 3875
BshTI	ACCGGT	2 cut(s)	1381, 3725
BshVI	ATCGAT	1 cut(s)	4134
BsiEI	CGRYCG	3 cut(s)	115, 174, 4520
BsiHKAI	GWGCWC	2 cut(s)	1510, 2086
BsiHKCI	CYCGRG	3 cut(s)	83, 288, 3061
BsiSI	CCGG	5 cut(s)	75, 289, 923, 1382, 3726
BslFI	GGGAC	6 cut(s)	1689, 3680, 3736, 3958, 3968, 4574
BsmAI	GTCTC	8 cut(s)	1019, 1780, 2390, 2981, 3359, 3408, 4200, 4313
BsmFI	GGGAC	6 cut(s)	1689, 3680, 3736, 3958, 3968, 4574
BsmI	GAATGC	3 cut(s)	586, 898, 3315
Bso31I	GGTCTC	1 cut(s)	2981
BsoBI	CYCGRG	3 cut(s)	83, 288, 3061
Bsp119I	TTCGAA	2 cut(s)	590, 4082
Bsp1286I	GDGCHC	5 cut(s)	82, 1510, 2086, 2515, 4265
Bsp1407I	TGTACA	2 cut(s)	3300, 4410
Bsp1720I	GCTNAGC	2 cut(s)	1856, 3892
Bsp19I	CCATGG	1 cut(s)	106
Bsp68I	TCGCGA	1 cut(s)	203
BspACI	CCGC	9 cut(s)	5, 40, 43, 111, 115, 416, 419, 2128, 2611
BspCNI	CTCAG	9 cut(s)	49, 1844, 1848, 2098, 2314, 2869, 2902, 4111, 4327
BspDI	ATCGAT	1 cut(s)	4134
BspFNI	CGCG	5 cut(s)	70, 194, 203, 213, 1532
BspMAI	CTGCAG	2 cut(s)	1426, 1699
BspMI	ACCTGC	2 cut(s)	1429, 2720
BspOI	GCTAGC	1 cut(s)	4479
BspPI	GGATC	8 cut(s)	114, 339, 764, 1359, 1460, 1473, 1954, 2207
BspQI	GCTCTTC	2 cut(s)	105, 1515
BspT104I	TTCGAA	2 cut(s)	590, 4082
BspT107I	GGYRCC	3 cut(s)	1112, 1378, 3875
BspTI	CTTAAG	1 cut(s)	1442
BspTNI	GGTCTC	1 cut(s)	2981
BsrDI	GCAATG	3 cut(s)	1522, 4209, 4378
BsrFI	RCCGGY	2 cut(s)	1381, 3725
BsrGI	TGTACA	2 cut(s)	3300, 4410
BsrI	ACTGG	9 cut(s)	967, 1709, 2902, 3087, 3210, 3422, 3444, 3748, 4099
BssAI	RCCGGY	2 cut(s)	1381, 3725
BssECI	CCNNGG	6 cut(s)	49, 106, 250, 288, 2195, 4169
BssNI	GRCGYC	2 cut(s)	62, 4378
BssSI	CACGAG	1 cut(s)	11
BssT1I	CCWWGG	1 cut(s)	106
Bst2BI	CACGAG	1 cut(s)	11
Bst2UI	CCWGG	7 cut(s)	251, 1576, 1848, 2063, 2196, 4170, 4217
BstACI	GRCGYC	2 cut(s)	62, 4378
BstAFI	CTTAAG	1 cut(s)	1442
BstAPI	GCANNNNNTGC	2 cut(s)	545, 4150
BstAUI	TGTACA	2 cut(s)	3300, 4410
BstBI	TTCGAA	2 cut(s)	590, 4082
BstC8I	GCNNGC	8 cut(s)	72, 2157, 2209, 2459, 2541, 3009, 4230, 4477
BstDSI	CCRYGG	1 cut(s)	106
BstEII	GGTNACC	1 cut(s)	2477
BstFNI	CGCG	5 cut(s)	70, 194, 203, 213, 1532
BstH2I	RGCGCY	2 cut(s)	91, 936
BstHHI	GCGC	6 cut(s)	70, 90, 196, 550, 935, 1532
BstMAI	GTCTC	8 cut(s)	1019, 1780, 2390, 2981, 3359, 3408, 4200, 4313
BstMCI	CGRYCG	3 cut(s)	115, 174, 4520
BstNI	CCWGG	7 cut(s)	251, 1576, 1848, 2063, 2196, 4170, 4217
BstNSI	RCATGY	5 cut(s)	1075, 1186, 2113, 2543, 3632
BstPI	GGTNACC	1 cut(s)	2477
BstSFI	CTRYAG	2 cut(s)	1422, 1695
BstSLI	GKGCMC	2 cut(s)	2515, 4265
BstUI	CGCG	5 cut(s)	70, 194, 203, 213, 1532
BstV2I	GAAGAC	3 cut(s)	438, 567, 2969
BstX2I	RGATCY	7 cut(s)	344, 1351, 1465, 1483, 2852, 2923, 4405
BstYI	RGATCY	7 cut(s)	344, 1351, 1465, 1483, 2852, 2923, 4405
BstZI	CGGCCG	2 cut(s)	112, 4517
Bsu15I	ATCGAT	1 cut(s)	4134
BsuI	GTATCC	3 cut(s)	2589, 4438, 4575
BsuTUI	ATCGAT	1 cut(s)	4134
BtgI	CCRYGG	1 cut(s)	106
BtgZI	GCGATG	3 cut(s)	276, 437, 2040
BtrI	CACGTC	2 cut(s)	3854, 4272
BtsI	GCAGTG	4 cut(s)	960, 1058, 1978, 3098
BtuMI	TCGCGA	1 cut(s)	203
BveI	ACCTGC	2 cut(s)	1429, 2720
Cac8I	GCNNGC	8 cut(s)	72, 2157, 2209, 2459, 2541, 3009, 4230, 4477
CaiI	CAGNNNCTG	1 cut(s)	442
CciNI	GCGGCCGC	1 cut(s)	112
CfoI	GCGC	6 cut(s)	70, 90, 196, 550, 935, 1532
Cfr10I	RCCGGY	2 cut(s)	1381, 3725
Cfr9I	CCCGGG	1 cut(s)	288
ClaI	ATCGAT	1 cut(s)	4134
CseI	GACGC	3 cut(s)	51, 200, 219
CsiI	ACCWGGT	2 cut(s)	1846, 4215
CspAI	ACCGGT	2 cut(s)	1381, 3725
DraI	TTTAAA	1 cut(s)	1734
DraIII	CACNNNGTG	1 cut(s)	2693
DrdI	GACNNNNNNGTC	1 cut(s)	197
DseDI	GACNNNNNNGTC	1 cut(s)	197
EaeI	YGGCCR	3 cut(s)	112, 4506, 4517
EagI	CGGCCG	2 cut(s)	112, 4517
EciI	GGCGGA	2 cut(s)	20, 58
Ecl136II	GAGCTC	1 cut(s)	2084
EclXI	CGGCCG	2 cut(s)	112, 4517
Eco130I	CCWWGG	1 cut(s)	106
Eco24I	GRGCYC	2 cut(s)	82, 2086
Eco31I	GGTCTC	1 cut(s)	2981
Eco32I	GATATC	1 cut(s)	4001
Eco47I	GGWCC	7 cut(s)	7, 285, 919, 2115, 2717, 3723, 4561
Eco47III	AGCGCT	1 cut(s)	934
Eco52I	CGGCCG	2 cut(s)	112, 4517
Eco53kI	GAGCTC	1 cut(s)	2084
Eco57I	CTGAAG	5 cut(s)	1014, 1281, 1299, 3618, 4301
Eco88I	CYCGRG	3 cut(s)	83, 288, 3061
Eco91I	GGTNACC	1 cut(s)	2477
EcoICRI	GAGCTC	1 cut(s)	2084
EcoO109I	RGGNCCY	4 cut(s)	919, 1568, 2717, 3394
EcoO65I	GGTNACC	1 cut(s)	2477
EcoRI	GAATTC	1 cut(s)	4072
EcoRII	CCWGG	7 cut(s)	249, 1574, 1846, 2061, 2194, 4168, 4215
EcoRV	GATATC	1 cut(s)	4001
EcoT14I	CCWWGG	1 cut(s)	106
EcoT22I	ATGCAT	1 cut(s)	2407
EcoT38I	GRGCYC	2 cut(s)	82, 2086
ErhI	CCWWGG	1 cut(s)	106
FalI	AAGNNNNNCTT	6 cut(s)	734, 766, 1261, 1293, 3540, 3572
FaqI	GGGAC	6 cut(s)	1689, 3680, 3736, 3958, 3968, 4574
FauNDI	CATATG	1 cut(s)	3373
FblI	GTMKAC	1 cut(s)	237
FriOI	GRGCYC	2 cut(s)	82, 2086
GlaI	GCGC	6 cut(s)	69, 89, 195, 549, 934, 1531
GsaI	CCCAGC	3 cut(s)	297, 1610, 3832
GsuI	CTGGAG	3 cut(s)	984, 2205, 3439
HaeII	RGCGCY	2 cut(s)	91, 936
HapII	CCGG	5 cut(s)	75, 289, 923, 1382, 3726
HgaI	GACGC	3 cut(s)	51, 200, 219
HhaI	GCGC	6 cut(s)	70, 90, 196, 550, 935, 1532
Hin1I	GRCGYC	2 cut(s)	62, 4378
Hin6I	GCGC	6 cut(s)	68, 88, 194, 548, 933, 1530
HinP1I	GCGC	6 cut(s)	68, 88, 194, 548, 933, 1530
HincII	GTYRAC	6 cut(s)	238, 1003, 1827, 3259, 3985, 4104
HindII	GTYRAC	6 cut(s)	238, 1003, 1827, 3259, 3985, 4104
HindIII	AAGCTT	3 cut(s)	1244, 1880, 2153
HpaI	GTTAAC	1 cut(s)	3259
HpaII	CCGG	5 cut(s)	75, 289, 923, 1382, 3726
HphI	GGTGA	9 cut(s)	188, 1031, 1633, 1654, 3185, 3565, 4190, 4231, 4340
Hpy99I	CGWCG	8 cut(s)	35, 67, 185, 213, 242, 245, 304, 326
HpyCH4IV	ACGT	6 cut(s)	2946, 3388, 3757, 3853, 4271, 4378
HpySE526I	ACGT	6 cut(s)	2946, 3388, 3757, 3853, 4271, 4378
Hsp92I	GRCGYC	2 cut(s)	62, 4378
HspAI	GCGC	6 cut(s)	68, 88, 194, 548, 933, 1530
KpnI	GGTACC	1 cut(s)	3879
KspAI	GTTAAC	1 cut(s)	3259
LguI	GCTCTTC	2 cut(s)	105, 1515
LmnI	GCTCC	8 cut(s)	53, 77, 1100, 1537, 2186, 2746, 2875, 3420
MabI	ACCWGGT	2 cut(s)	1846, 4215
MaeII	ACGT	6 cut(s)	2946, 3388, 3757, 3853, 4271, 4378
MaeIII	GTNAC	7 cut(s)	176, 1056, 1717, 1796, 2252, 2477, 4603
MfeI	CAATTG	2 cut(s)	21, 3231
MflI	RGATCY	7 cut(s)	344, 1351, 1465, 1483, 2852, 2923, 4405
MhlI	GDGCHC	5 cut(s)	82, 1510, 2086, 2515, 4265
MlsI	TGGCCA	1 cut(s)	4508
MluNI	TGGCCA	1 cut(s)	4508
MlyI	GAGTC	5 cut(s)	320, 1274, 1711, 2293, 3908
MmeI	TCCRAC	5 cut(s)	1329, 1515, 1998, 2017, 2634
Mox20I	TGGCCA	1 cut(s)	4508
Mph1103I	ATGCAT	1 cut(s)	2407
MroXI	GAANNNNTTC	2 cut(s)	219, 3501
MscI	TGGCCA	1 cut(s)	4508
MslI	CAYNNNNRTG	6 cut(s)	1230, 1820, 2242, 2436, 2843, 3771
Msp20I	TGGCCA	1 cut(s)	4508
MspA1I	CMGCKG	4 cut(s)	2305, 2461, 3341, 4588
MspCI	CTTAAG	1 cut(s)	1442
MspI	CCGG	5 cut(s)	75, 289, 923, 1382, 3726
MunI	CAATTG	2 cut(s)	21, 3231
Mva1269I	GAATGC	3 cut(s)	586, 898, 3315
MvaI	CCWGG	7 cut(s)	251, 1576, 1848, 2063, 2196, 4170, 4217
MvnI	CGCG	5 cut(s)	70, 194, 203, 213, 1532
NciI	CCSGG	3 cut(s)	289, 290, 923
NcoI	CCATGG	1 cut(s)	106
NdeI	CATATG	1 cut(s)	3373
NheI	GCTAGC	1 cut(s)	4475
NmeAIII	GCCGAG	2 cut(s)	361, 3437
NmuCI	GTSAC	4 cut(s)	176, 1056, 1796, 2252
NotI	GCGGCCGC	1 cut(s)	112
NruI	TCGCGA	1 cut(s)	203
NsiI	ATGCAT	1 cut(s)	2407
NspI	RCATGY	5 cut(s)	1075, 1186, 2113, 2543, 3632
NspV	TTCGAA	2 cut(s)	590, 4082
OliI	CACNNNNGTG	2 cut(s)	1820, 2843
PaeI	GCATGC	1 cut(s)	2543
PaeR7I	CTCGAG	2 cut(s)	83, 3061
PaqCI	CACCTGC	1 cut(s)	2720
PciI	ACATGT	1 cut(s)	3628
PciSI	GCTCTTC	2 cut(s)	105, 1515
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PctI	GAATGC	3 cut(s)	586, 898, 3315
PdmI	GAANNNNTTC	2 cut(s)	219, 3501
PflFI	GACNNNGTC	1 cut(s)	170
PflMI	CCANNNNNTGG	1 cut(s)	4441
PinAI	ACCGGT	2 cut(s)	1381, 3725
PleI	GAGTC	5 cut(s)	319, 1273, 1710, 2293, 3908
PpsI	GAGTC	5 cut(s)	319, 1273, 1710, 2293, 3908
PpuMI	RGGWCCY	2 cut(s)	919, 2717
PscI	ACATGT	1 cut(s)	3628
PshBI	ATTAAT	1 cut(s)	714
PsiI	TTATAA	1 cut(s)	3095
Psp124BI	GAGCTC	1 cut(s)	2086
Psp5II	RGGWCCY	2 cut(s)	919, 2717
Psp6I	CCWGG	7 cut(s)	249, 1574, 1846, 2061, 2194, 4168, 4215
PspEI	GGTNACC	1 cut(s)	2477
PspFI	CCCAGC	3 cut(s)	293, 1606, 3828
PspGI	CCWGG	7 cut(s)	249, 1574, 1846, 2061, 2194, 4168, 4215
PspPPI	RGGWCCY	2 cut(s)	919, 2717
PspXI	VCTCGAGB	1 cut(s)	83
PsrI	GAACNNNNNNTAC	2 cut(s)	146, 178
PstI	CTGCAG	2 cut(s)	1426, 1699
PstNI	CAGNNNCTG	1 cut(s)	442
PsuI	RGATCY	7 cut(s)	344, 1351, 1465, 1483, 2852, 2923, 4405
PsyI	GACNNNGTC	1 cut(s)	170
PvuII	CAGCTG	4 cut(s)	2305, 2461, 3341, 4588
RruI	TCGCGA	1 cut(s)	203
RseI	CAYNNNNRTG	6 cut(s)	1230, 1820, 2242, 2436, 2843, 3771
SacI	GAGCTC	1 cut(s)	2086
SalI	GTCGAC	1 cut(s)	236
SapI	GCTCTTC	2 cut(s)	105, 1515
SbfI	CCTGCAGG	1 cut(s)	1426
SchI	GAGTC	5 cut(s)	320, 1274, 1711, 2293, 3908
SdaI	CCTGCAGG	1 cut(s)	1426
SduI	GDGCHC	5 cut(s)	82, 1510, 2086, 2515, 4265
SexAI	ACCWGGT	2 cut(s)	1846, 4215
SfcI	CTRYAG	2 cut(s)	1422, 1695
Sfr274I	CTCGAG	2 cut(s)	83, 3061
SfuI	TTCGAA	2 cut(s)	590, 4082
SinI	GGWCC	7 cut(s)	7, 285, 919, 2115, 2717, 3723, 4561
SlaI	CTCGAG	2 cut(s)	83, 3061
SmaI	CCCGGG	1 cut(s)	290
SmiMI	CAYNNNNRTG	6 cut(s)	1230, 1820, 2242, 2436, 2843, 3771
SmlI	CTYRAG	7 cut(s)	83, 1442, 2132, 2978, 3061, 3320, 3557
SmoI	CTYRAG	7 cut(s)	83, 1442, 2132, 2978, 3061, 3320, 3557
SphI	GCATGC	1 cut(s)	2543
Sse8387I	CCTGCAGG	1 cut(s)	1426
SsiI	CCGC	9 cut(s)	5, 40, 43, 111, 115, 416, 419, 2128, 2611
SspI	AATATT	1 cut(s)	2674
SstI	GAGCTC	1 cut(s)	2086
StyI	CCWWGG	1 cut(s)	106
TaiI	ACGT	6 cut(s)	2949, 3391, 3760, 3856, 4274, 4381
TaqI	TCGA	9 cut(s)	84, 223, 237, 449, 590, 3062, 3399, 4082, 4134
TaqII	GACCGA	1 cut(s)	2331
TatI	WGTACW	8 cut(s)	1148, 1438, 3267, 3300, 4251, 4293, 4392, 4410
TauI	GCSGC	6 cut(s)	43, 114, 117, 419, 422, 2130
TseFI	GTSAC	4 cut(s)	176, 1056, 1796, 2252
Tsp45I	GTSAC	4 cut(s)	176, 1056, 1796, 2252
TspGWI	ACGGA	6 cut(s)	589, 1280, 1865, 1940, 4412, 4590
TspMI	CCCGGG	1 cut(s)	288
Tth111I	GACNNNGTC	1 cut(s)	170
Van91I	CCANNNNNTGG	1 cut(s)	4441
Vha464I	CTTAAG	1 cut(s)	1442
VpaK11BI	GGWCC	7 cut(s)	7, 285, 919, 2115, 2717, 3723, 4561
VspI	ATTAAT	1 cut(s)	714
XapI	RAATTY	3 cut(s)	1366, 4072, 4512
XceI	RCATGY	5 cut(s)	1075, 1186, 2113, 2543, 3632
XcmI	CCANNNNNNNNNTGG	2 cut(s)	748, 2109
XhoI	CTCGAG	2 cut(s)	83, 3061
XmaI	CCCGGG	1 cut(s)	288
XmiI	GTMKAC	1 cut(s)	237
XmnI	GAANNNNTTC	2 cut(s)	219, 3501
ZraI	GACGTC	1 cut(s)	4379
Zsp2I	ATGCAT	1 cut(s)	2407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.