Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000310

Physical Location & Seq

Genomic Coordinates Forward (+)

10229583 .. 10232553

Gene Structure 2971 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36707

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGGAACTTCAAGGCTGCAATACCTTCAGAGTGCTACTAGTGAAGATCTGTTCTTCCCTTGCAGAAACAAAAGAGAAAATTGTTGCTAATTTGGAGAATTTTGCTTATGATCCTTACAACTATACATATTTGCGCCAGACGATCTACTACACGGTCGACGAGGACGAGTACGACGCCATCATCGCCAAGCAAAGCGAGGAGTTCGGGGACTTCATCGAGGACGACGACGGCCTAGGGTACCGCGACGACGGCGAGGAAGAGGACTGGACCCGCCACGGGCTTCCTACGTCGTCAGATGAATCGGATGGCGATATGAGGCCTAAGAGGAGGAAGACGGTGGAGAAGAAGGAGAAGGAGCCACGGCCCAAAAAGCCCAATTCGTCGCTTACGGCGGCGGCGGAGATGATGGGGAAGCAGAGGCTTTCGTCGATGTTCACGTCGCCGGTGTTTAATAAAAGTAGGGATGGTGACAAGGCCAAAGGATTGTCTTGTGATAGCATTGTGGATGATGTGATTGCCGAGTTTGTGCCGGACGAGGCTGATAGAGAGAGACGGATGAGGGCACAGCCGGCGAGGAGTTTCGTTCCGATTACCGGAGTTAAGAGTGAGAGAGTGAGAGAGGCAGTGCATGTCGATGGTGAGGCTTGGGCTTGGGTCGGATTTGGGTGCTGGATCGATTGGAGGTGGCGGCGTGATGAAATGGTGGCCGGAGATGGTGTTCTCCGGTGGTTGCAGAGGGAAGAAGAAGATGAGAGGTCGAGGGAGAGAGAGAGAGACCGTGCGGCCAGGAGAGAGGGAGGGAGGGAGAGAGAGAGAGTATTAAAAAAAAAGGAGAAAAATAAAAAAAATAGAGAAAAAATAAAAATAAAAATAGAAAATGAGGGGCATAATAGTCATTTCGGATCATTTTGGACTTGTTATATGAGAATTAGAGAGAATAATGACTATTCAGTGAATTATGCAATTGGGTCGTTTTACTATCTTTGCAACGCATCTAACAAGGAAGTGATTATGAAGCCAGAAGTCATTGATGTCATGAACAGCATATCTCAAGCAGCAAGTGTCAGCTTCAGTATTCTAGCCGAGGCATTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000428 GO:0000726 GO:0003674 GO:0003824 GO:0003887 GO:0003896 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005658 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006269 GO:0006270 GO:0006271 GO:0006272 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009965 GO:0009987 GO:0010016 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0022616 GO:0030880 GO:0030894 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0032993 GO:0033554 GO:0034061 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051716 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0071897 GO:0090304 GO:0097747 GO:0099402 GO:0140097 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 map00230 map00240 map01100 map03030

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 DNA_pol_alpha_N zf-DNA_Pol

Protein Analysis

365

Amino Acids

42.41

Weight (kDa)

5.44

Isoelectric Point (pI)

49.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol_alpha_N	PF12254	44 - 89	1.2e-11	DNA polymerase alpha subunit p180 N terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67100 AT5G67100
fragaria_vesca	FvH4_1g20001 FvH4_1g22730 FvH4_1g22730 FvH4_1g22730 FvH4_6g13861 FvH4_6g33603
malus_domestica	MD02G1174100.v1.1 MD02G1174200.v1.1 MD02G1174400.v1.1 MD15G1285400.v1.1
prunus_persica	Prupe.7G131600_v2.0.a1
pyrus_communis	pycom02g14040 pycom02g14050 pycom02g14060 pycom02g14070 pycom15g24830 pycom15g24840
rosa_chinensis	RchiOBHm_Chr2g0109901 RchiOBHm_Chr2g0117021 RchiOBHm_Chr2g0168121 RchiOBHm_Chr4g0394581
rosa_laevigata	RLG00000001621 RLG00000001943 RLG00000003450 RLG00000006116 RLG00000006535 RLG00000008147 RLG00000009121 RLG00000010680 RLG00000013987 RLG00000017585 RLG00000017603 RLG00000017638 RLG00000017923 RLG00000018320 RLG00000021520 RLG00000022613 RLG00000022614 RLG00000023966 RLG00000025998 RLG00000027760 RLG00000033421
rosa_multiflora	Rmu_co7985806.1_g000001 Rmu_co8250293.1_g000001 Rmu_co8353517.1_g000001 Rmu_sc0000697.1_g000011 Rmu_sc0000776.1_g000079 Rmu_sc0001023.1_g000057 Rmu_sc0001266.1_g000019 Rmu_sc0002711.1_g000010 Rmu_sc0002731.1_g000005 Rmu_sc0003002.1_g000047 Rmu_sc0003030.1_g000002 Rmu_sc0003672.1_g000003 Rmu_sc0004168.1_g000062 Rmu_sc0004180.1_g000003 Rmu_sc0009205.1_g000008 Rmu_sc0011259.1_g000001 Rmu_sc0011259.1_g000002 Rmu_sc0027274.1_g000001
rosa_roxburghii	Rroxscaffold_1G00023520 Rroxscaffold_2G00104450 Rroxscaffold_2G00126810 Rroxscaffold_2G00144870 Rroxscaffold_4G00315680 Rroxscaffold_4G00331480 Rroxscaffold_7G00182820
rosa_rugosa	Rorug02G0209600 Rorug04G0130600 Rorug04G0130600 Rorug04G0130700 Rorug05G0230000
rosa_samantha	Rh1AG170000 Rh1CG157700 Rh1CG385600 Rh2AG215100 Rh2AG265500 Rh2BG277300 Rh2CG217600 Rh2CG217700 Rh2DG220600 Rh2DG272800 Rh2DG291800 Rh3AG215700 Rh3BG271700 Rh3DG075200 Rh3DG242600 Rh4AG115400 Rh4AG138100 Rh4AG333600 Rh4BG115100 Rh4BG366300 Rh4CG125400 Rh4CG380400 Rh4DG083500 Rh4DG113200 Rh4DG192900 Rh4DG246300 Rh5AG075000 Rh5BG482300 Rh5CG181200 Rh5CG247200 Rh5CG506900 Rh5DG167600 Rh5DG202900 Rh6AG000500 Rh6AG213400 Rh6BG335800 Rh6CG255700 Rh7AG337500 Rh7BG404500 Rh7BG461500 Rh7CG355600
rosa_wichuraiana	Rw0G019110 Rw2G020950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	237
AccB1I	GGYRCC	1 cut(s)	237
AccI	GTMKAC	1 cut(s)	156
AccII	CGCG	1 cut(s)	243
AciI	CCGC	7 cut(s)	241, 271, 392, 395, 398, 688, 782
AclWI	GGATC	3 cut(s)	104, 680, 910
AcoI	YGGCCR	2 cut(s)	705, 783
AcsI	RAATTY	1 cut(s)	97
AcuI	CTGAAG	2 cut(s)	10, 1054
AcyI	GRCGYC	1 cut(s)	174
AfaI	GTAC	2 cut(s)	170, 239
AfiI	CCNNNNNNNGG	2 cut(s)	276, 593
AgsI	TTSAA	1 cut(s)	11
AhlI	ACTAGT	1 cut(s)	37
AjiI	CACGTC	1 cut(s)	438
AjnI	CCWGG	1 cut(s)	785
AloI	GAACNNNNNNTCC	2 cut(s)	702, 734
AluBI	AGCT	1 cut(s)	1068
AluI	AGCT	1 cut(s)	1068
Alw26I	GTCTC	2 cut(s)	544, 768
AlwI	GGATC	3 cut(s)	104, 680, 910
AoxI	GGCC	6 cut(s)	229, 317, 362, 474, 705, 783
ApeKI	GCWGC	2 cut(s)	15, 1055
ApoI	RAATTY	1 cut(s)	97
Asp718I	GGTACC	1 cut(s)	237
AspA2I	CCTAGG	1 cut(s)	232
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	2 cut(s)	267, 363
AsuHPI	GGTGA	2 cut(s)	479, 650
AvaII	GGWCC	1 cut(s)	267
AvrII	CCTAGG	1 cut(s)	232
BaeGI	GKGCMC	1 cut(s)	565
BanI	GGYRCC	1 cut(s)	237
BbsI	GAAGAC	1 cut(s)	338
BbvI	GCAGC	2 cut(s)	2, 1067
BccI	CCATC	6 cut(s)	185, 299, 400, 458, 629, 707
BceAI	ACGGC	4 cut(s)	244, 265, 377, 405
BcgI	CGANNNNNNTGC	2 cut(s)	951, 985
BciT130I	CCWGG	1 cut(s)	787
BcoDI	GTCTC	2 cut(s)	544, 768
BcuI	ACTAGT	1 cut(s)	37
BfaI	CTAG	3 cut(s)	38, 233, 1079
BglII	AGATCT	1 cut(s)	45
BisI	GCNGC	6 cut(s)	16, 393, 396, 689, 783, 1056
BlnI	CCTAGG	1 cut(s)	232
BlsI	GCNGC	6 cut(s)	17, 394, 397, 690, 784, 1057
Bme1390I	CCNGG	1 cut(s)	787
Bme18I	GGWCC	1 cut(s)	267
BmgBI	CACGTC	1 cut(s)	438
BmgT120I	GGNCC	2 cut(s)	267, 363
BmiI	GGNNCC	3 cut(s)	239, 269, 357
BmrFI	CCNGG	1 cut(s)	787
BmsI	GCATC	1 cut(s)	1001
BpiI	GAAGAC	1 cut(s)	338
BpuEI	CTTGAG	1 cut(s)	1035
Bsa29I	ATCGAT	1 cut(s)	675
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	768
BsaJI	CCNNGG	4 cut(s)	232, 274, 359, 1083
BsaWI	WCCGGW	2 cut(s)	593, 723
BsaXI	ACNNNNNCTCC	2 cut(s)	702, 732
Bsc4I	CCNNNNNNNGG	2 cut(s)	276, 593
Bse118I	RCCGGY	2 cut(s)	442, 568
Bse1I	ACTGG	1 cut(s)	269
BseBI	CCWGG	1 cut(s)	787
BseCI	ATCGAT	1 cut(s)	675
BseDI	CCNNGG	4 cut(s)	232, 274, 359, 1083
BseGI	GGATG	4 cut(s)	310, 469, 511, 561
BseLI	CCNNNNNNNGG	2 cut(s)	276, 593
BseNI	ACTGG	1 cut(s)	269
BseRI	GAGGAG	3 cut(s)	212, 340, 589
BseSI	GKGCMC	1 cut(s)	565
BseXI	GCAGC	2 cut(s)	2, 1067
Bsh1236I	CGCG	1 cut(s)	243
Bsh1285I	CGRYCG	1 cut(s)	156
BshFI	GGCC	6 cut(s)	231, 319, 364, 476, 707, 785
BshNI	GGYRCC	1 cut(s)	237
BshVI	ATCGAT	1 cut(s)	675
BsiEI	CGRYCG	1 cut(s)	156
BsiSI	CCGG	6 cut(s)	443, 530, 569, 594, 708, 724
BslFI	GGGAC	1 cut(s)	221
BslI	CCNNNNNNNGG	2 cut(s)	276, 593
BsmAI	GTCTC	2 cut(s)	544, 768
BsmBI	CGTCTC	1 cut(s)	544
BsmFI	GGGAC	1 cut(s)	221
BsnI	GGCC	6 cut(s)	231, 319, 364, 476, 707, 785
Bso31I	GGTCTC	1 cut(s)	768
Bsp1286I	GDGCHC	1 cut(s)	565
Bsp143I	GATC	5 cut(s)	45, 109, 141, 672, 902
BspACI	CCGC	7 cut(s)	241, 271, 392, 395, 398, 688, 782
BspANI	GGCC	6 cut(s)	231, 319, 364, 476, 707, 785
BspDI	ATCGAT	1 cut(s)	675
BspFNI	CGCG	1 cut(s)	243
BspHI	TCATGA	1 cut(s)	1035
BspLI	GGNNCC	3 cut(s)	239, 269, 357
BspPI	GGATC	3 cut(s)	104, 680, 910
BspT107I	GGYRCC	1 cut(s)	237
BspTNI	GGTCTC	1 cut(s)	768
BsrFI	RCCGGY	2 cut(s)	442, 568
BsrI	ACTGG	1 cut(s)	269
BssAI	RCCGGY	2 cut(s)	442, 568
BssECI	CCNNGG	4 cut(s)	232, 274, 359, 1083
BssMI	GATC	5 cut(s)	45, 109, 141, 672, 902
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	1 cut(s)	232
Bst2UI	CCWGG	1 cut(s)	787
Bst4CI	ACNGT	3 cut(s)	154, 337, 779
Bst6I	CTCTTC	1 cut(s)	252
BstACI	GRCGYC	1 cut(s)	174
BstC8I	GCNNGC	1 cut(s)	570
BstDEI	CTNAG	1 cut(s)	321
BstDSI	CCRYGG	2 cut(s)	274, 359
BstF5I	GGATG	4 cut(s)	310, 469, 511, 561
BstFNI	CGCG	1 cut(s)	243
BstHHI	GCGC	1 cut(s)	135
BstKTI	GATC	5 cut(s)	48, 112, 144, 675, 905
BstMAI	GTCTC	2 cut(s)	544, 768
BstMBI	GATC	5 cut(s)	45, 109, 141, 672, 902
BstMCI	CGRYCG	1 cut(s)	156
BstMWI	GCNNNNNNNGC	4 cut(s)	182, 249, 370, 569
BstNI	CCWGG	1 cut(s)	787
BstNSI	RCATGY	1 cut(s)	632
BstSCI	CCNGG	1 cut(s)	785
BstSLI	GKGCMC	1 cut(s)	565
BstUI	CGCG	1 cut(s)	243
BstV1I	GCAGC	2 cut(s)	2, 1067
BstV2I	GAAGAC	1 cut(s)	338
BstX2I	RGATCY	1 cut(s)	45
BstYI	RGATCY	1 cut(s)	45
Bsu15I	ATCGAT	1 cut(s)	675
BsuRI	GGCC	6 cut(s)	231, 319, 364, 476, 707, 785
BsuTUI	ATCGAT	1 cut(s)	675
BtgI	CCRYGG	2 cut(s)	274, 359
BtgZI	GCGATG	1 cut(s)	166
BtrI	CACGTC	1 cut(s)	438
BtsCI	GGATG	4 cut(s)	310, 469, 511, 561
BtsI	GCAGTG	1 cut(s)	630
BtsIMutI	CAGTG	2 cut(s)	630, 957
Cac8I	GCNNGC	1 cut(s)	570
CciI	TCATGA	1 cut(s)	1035
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	2 cut(s)	442, 568
Cfr13I	GGNCC	2 cut(s)	267, 363
ClaI	ATCGAT	1 cut(s)	675
CseI	GACGC	1 cut(s)	182
Csp6I	GTAC	2 cut(s)	169, 238
CviAII	CATG	2 cut(s)	629, 1036
CviQI	GTAC	2 cut(s)	169, 238
DdeI	CTNAG	1 cut(s)	321
DpnI	GATC	5 cut(s)	47, 111, 143, 674, 904
DpnII	GATC	5 cut(s)	45, 109, 141, 672, 902
EaeI	YGGCCR	2 cut(s)	705, 783
Eam1104I	CTCTTC	1 cut(s)	252
EarI	CTCTTC	1 cut(s)	252
EciI	GGCGGA	1 cut(s)	413
Eco130I	CCWWGG	1 cut(s)	232
Eco147I	AGGCCT	1 cut(s)	319
Eco31I	GGTCTC	1 cut(s)	768
Eco47I	GGWCC	1 cut(s)	267
Eco57I	CTGAAG	2 cut(s)	10, 1054
EcoRII	CCWGG	1 cut(s)	785
EcoT14I	CCWWGG	1 cut(s)	232
ErhI	CCWWGG	1 cut(s)	232
Esp3I	CGTCTC	1 cut(s)	544
FaeI	CATG	2 cut(s)	632, 1039
FaqI	GGGAC	1 cut(s)	221
FatI	CATG	2 cut(s)	628, 1035
FauI	CCCGC	1 cut(s)	278
FblI	GTMKAC	1 cut(s)	156
Fnu4HI	GCNGC	6 cut(s)	16, 393, 396, 689, 783, 1056
FokI	GGATG	4 cut(s)	317, 476, 518, 568
Fsp4HI	GCNGC	6 cut(s)	16, 393, 396, 689, 783, 1056
FspBI	CTAG	3 cut(s)	38, 233, 1079
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	6 cut(s)	16, 393, 396, 689, 783, 1056
HaeIII	GGCC	6 cut(s)	231, 319, 364, 476, 707, 785
HapII	CCGG	6 cut(s)	443, 530, 569, 594, 708, 724
HgaI	GACGC	1 cut(s)	182
HhaI	GCGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	174
Hin1II	CATG	2 cut(s)	632, 1039
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HincII	GTYRAC	1 cut(s)	157
HindII	GTYRAC	1 cut(s)	157
HinfI	GANTC	1 cut(s)	299
HpaII	CCGG	6 cut(s)	443, 530, 569, 594, 708, 724
HphI	GGTGA	2 cut(s)	479, 650
Hpy166II	GTNNAC	2 cut(s)	157, 435
Hpy188I	TCNGA	6 cut(s)	29, 295, 304, 588, 659, 902
Hpy188III	TCNNGA	1 cut(s)	1036
Hpy8I	GTNNAC	2 cut(s)	157, 435
HpyAV	CCTTC	3 cut(s)	34, 340, 346
HpyCH4III	ACNGT	3 cut(s)	154, 337, 779
HpyCH4IV	ACGT	2 cut(s)	287, 437
HpyCH4V	TGCA	6 cut(s)	18, 62, 628, 733, 962, 987
HpyF10VI	GCNNNNNNNGC	4 cut(s)	182, 249, 370, 569
HpyF3I	CTNAG	1 cut(s)	321
HpySE526I	ACGT	2 cut(s)	287, 437
Hsp92I	GRCGYC	1 cut(s)	174
Hsp92II	CATG	2 cut(s)	632, 1039
HspAI	GCGC	1 cut(s)	133
KpnI	GGTACC	1 cut(s)	241
KroI	GCCGGC	1 cut(s)	568
KroNI	GCCGGC	1 cut(s)	570
Kzo9I	GATC	5 cut(s)	45, 109, 141, 672, 902
LmnI	GCTCC	1 cut(s)	355
Lsp1109I	GCAGC	2 cut(s)	2, 1067
LweI	GCATC	1 cut(s)	1001
MaeI	CTAG	3 cut(s)	38, 233, 1079
MaeII	ACGT	2 cut(s)	287, 437
MaeIII	GTNAC	1 cut(s)	467
MalI	GATC	5 cut(s)	47, 111, 143, 674, 904
MboI	GATC	5 cut(s)	45, 109, 141, 672, 902
MboII	GAAGA	8 cut(s)	45, 55, 269, 343, 355, 752, 755, 758
MfeI	CAATTG	1 cut(s)	963
MflI	RGATCY	1 cut(s)	45
MhlI	GDGCHC	1 cut(s)	565
MluCI	AATT	7 cut(s)	78, 88, 97, 376, 927, 955, 963
MmeI	TCCRAC	1 cut(s)	637
MroNI	GCCGGC	1 cut(s)	568
MseI	TTAA	3 cut(s)	450, 600, 821
MslI	CAYNNNNRTG	1 cut(s)	633
MspI	CCGG	6 cut(s)	443, 530, 569, 594, 708, 724
MspR9I	CCNGG	1 cut(s)	787
MunI	CAATTG	1 cut(s)	963
MvaI	CCWGG	1 cut(s)	787
MvnI	CGCG	1 cut(s)	243
MwoI	GCNNNNNNNGC	4 cut(s)	182, 249, 370, 569
NaeI	GCCGGC	1 cut(s)	570
NdeII	GATC	5 cut(s)	45, 109, 141, 672, 902
NgoMIV	GCCGGC	1 cut(s)	568
NlaIII	CATG	2 cut(s)	632, 1039
NlaIV	GGNNCC	3 cut(s)	239, 269, 357
NmeAIII	GCCGAG	1 cut(s)	544
NmuCI	GTSAC	1 cut(s)	467
NspI	RCATGY	1 cut(s)	632
PagI	TCATGA	1 cut(s)	1035
PceI	AGGCCT	1 cut(s)	319
PcsI	WCGNNNNNNNCGW	3 cut(s)	162, 222, 434
PdiI	GCCGGC	1 cut(s)	570
PfeI	GAWTC	1 cut(s)	299
PkrI	GCNGC	6 cut(s)	17, 394, 397, 690, 784, 1057
Psp6I	CCWGG	1 cut(s)	785
PspGI	CCWGG	1 cut(s)	785
PspN4I	GGNNCC	3 cut(s)	239, 269, 357
PspPI	GGNCC	2 cut(s)	267, 363
PsuI	RGATCY	1 cut(s)	45
RsaI	GTAC	2 cut(s)	170, 239
RsaNI	GTAC	2 cut(s)	169, 238
RseI	CAYNNNNRTG	1 cut(s)	633
SalI	GTCGAC	1 cut(s)	155
SaqAI	TTAA	3 cut(s)	450, 600, 821
SatI	GCNGC	6 cut(s)	16, 393, 396, 689, 783, 1056
Sau3AI	GATC	5 cut(s)	45, 109, 141, 672, 902
Sau96I	GGNCC	2 cut(s)	267, 363
ScrFI	CCNGG	1 cut(s)	787
SduI	GDGCHC	1 cut(s)	565
SetI	ASST	6 cut(s)	26, 290, 440, 686, 758, 1070
SfaNI	GCATC	1 cut(s)	1001
SgrAI	CRCCGGYG	1 cut(s)	442
SinI	GGWCC	1 cut(s)	267
SmiMI	CAYNNNNRTG	1 cut(s)	633
SmlI	CTYRAG	1 cut(s)	1050
SmoI	CTYRAG	1 cut(s)	1050
SpeI	ACTAGT	1 cut(s)	37
Sse9I	AATT	7 cut(s)	78, 88, 97, 376, 927, 955, 963
SseBI	AGGCCT	1 cut(s)	319
SsiI	CCGC	7 cut(s)	241, 271, 392, 395, 398, 688, 782
SspMI	CTAG	3 cut(s)	38, 233, 1079
StuI	AGGCCT	1 cut(s)	319
StyD4I	CCNGG	1 cut(s)	785
StyI	CCWWGG	1 cut(s)	232
TaaI	ACNGT	3 cut(s)	154, 337, 779
TaiI	ACGT	2 cut(s)	290, 440
TaqI	TCGA	6 cut(s)	156, 216, 428, 633, 675, 758
TasI	AATT	7 cut(s)	78, 88, 97, 376, 927, 955, 963
TauI	GCSGC	4 cut(s)	395, 398, 691, 785
TfiI	GAWTC	1 cut(s)	299
Tru1I	TTAA	3 cut(s)	450, 600, 821
Tru9I	TTAA	3 cut(s)	450, 600, 821
TscAI	CASTG	2 cut(s)	630, 957
TseFI	GTSAC	1 cut(s)	467
TseI	GCWGC	2 cut(s)	15, 1055
Tsp45I	GTSAC	1 cut(s)	467
TspDTI	ATGAA	5 cut(s)	202, 312, 711, 1028, 1052
TspGWI	ACGGA	1 cut(s)	568
TspRI	CASTG	2 cut(s)	630, 957
VpaK11BI	GGWCC	1 cut(s)	267
XapI	RAATTY	1 cut(s)	97
XceI	RCATGY	1 cut(s)	632
XmaJI	CCTAGG	1 cut(s)	232
XmiI	GTMKAC	1 cut(s)	156
XspI	CTAG	3 cut(s)	38, 233, 1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.