DNA polymerase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 262 |
| AccII | CGCG | 1 cut(s) | 404 |
| AciI | CCGC | 4 cut(s) | 305, 402, 435, 438 |
| AclWI | GGATC | 2 cut(s) | 362, 375 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 62 |
| AgsI | TTSAA | 2 cut(s) | 119, 343 |
| AlwI | GGATC | 2 cut(s) | 362, 375 |
| Ama87I | CYCGRG | 1 cut(s) | 266 |
| AoxI | GGCC | 2 cut(s) | 399, 417 |
| AspS9I | GGNCC | 1 cut(s) | 417 |
| AsuC2I | CCSGG | 1 cut(s) | 421 |
| AsuHPI | GGTGA | 1 cut(s) | 328 |
| AvaI | CYCGRG | 1 cut(s) | 266 |
| BaeGI | GKGCMC | 2 cut(s) | 34, 267 |
| BamHI | GGATCC | 1 cut(s) | 367 |
| BanI | GGYRCC | 1 cut(s) | 262 |
| BbsI | GAAGAC | 1 cut(s) | 284 |
| BbvCI | CCTCAGC | 1 cut(s) | 294 |
| BccI | CCATC | 2 cut(s) | 387, 497 |
| BcnI | CCSGG | 1 cut(s) | 421 |
| BisI | GCNGC | 3 cut(s) | 402, 436, 439 |
| BlsI | GCNGC | 3 cut(s) | 403, 437, 440 |
| Bme1390I | CCNGG | 1 cut(s) | 421 |
| BmeT110I | CYCGRG | 1 cut(s) | 266 |
| BmgT120I | GGNCC | 1 cut(s) | 417 |
| BmiI | GGNNCC | 4 cut(s) | 264, 309, 369, 418 |
| BmrFI | CCNGG | 1 cut(s) | 421 |
| BpiI | GAAGAC | 1 cut(s) | 284 |
| Bpu10I | CCTNAGC | 1 cut(s) | 294 |
| BpuMI | CCSGG | 1 cut(s) | 421 |
| BsaBI | GATNNNNATC | 2 cut(s) | 366, 489 |
| BsaJI | CCNNGG | 2 cut(s) | 267, 420 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 62 |
| Bse118I | RCCGGY | 2 cut(s) | 37, 62 |
| Bse1I | ACTGG | 2 cut(s) | 415, 433 |
| Bse3DI | GCAATG | 1 cut(s) | 448 |
| Bse8I | GATNNNNATC | 2 cut(s) | 366, 489 |
| BseDI | CCNNGG | 2 cut(s) | 267, 420 |
| BseGI | GGATG | 1 cut(s) | 398 |
| BseJI | GATNNNNATC | 2 cut(s) | 366, 489 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BseMI | GCAATG | 1 cut(s) | 448 |
| BseMII | CTCAG | 3 cut(s) | 174, 273, 285 |
| BseNI | ACTGG | 2 cut(s) | 415, 433 |
| BseRI | GAGGAG | 2 cut(s) | 40, 284 |
| BseSI | GKGCMC | 2 cut(s) | 34, 267 |
| BsgI | GTGCAG | 1 cut(s) | 320 |
| Bsh1236I | CGCG | 1 cut(s) | 404 |
| BshFI | GGCC | 2 cut(s) | 401, 419 |
| BshNI | GGYRCC | 1 cut(s) | 262 |
| BsiHKCI | CYCGRG | 1 cut(s) | 266 |
| BsiSI | CCGG | 4 cut(s) | 38, 63, 371, 420 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BsmI | GAATGC | 1 cut(s) | 349 |
| BsnI | GGCC | 2 cut(s) | 401, 419 |
| BsoBI | CYCGRG | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 2 cut(s) | 34, 267 |
| Bsp143I | GATC | 2 cut(s) | 367, 490 |
| BspACI | CCGC | 4 cut(s) | 305, 402, 435, 438 |
| BspANI | GGCC | 2 cut(s) | 401, 419 |
| BspCNI | CTCAG | 3 cut(s) | 175, 274, 286 |
| BspFNI | CGCG | 1 cut(s) | 404 |
| BspLI | GGNNCC | 4 cut(s) | 264, 309, 369, 418 |
| BspPI | GGATC | 2 cut(s) | 362, 375 |
| BspT107I | GGYRCC | 1 cut(s) | 262 |
| BsrDI | GCAATG | 1 cut(s) | 448 |
| BsrFI | RCCGGY | 2 cut(s) | 37, 62 |
| BsrI | ACTGG | 2 cut(s) | 415, 433 |
| BssAI | RCCGGY | 2 cut(s) | 37, 62 |
| BssECI | CCNNGG | 2 cut(s) | 267, 420 |
| BssMI | GATC | 2 cut(s) | 367, 490 |
| Bst6I | CTCTTC | 2 cut(s) | 65, 321 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 380 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 303 |
| BstDEI | CTNAG | 3 cut(s) | 183, 282, 294 |
| BstF5I | GGATG | 1 cut(s) | 398 |
| BstFNI | CGCG | 1 cut(s) | 404 |
| BstKTI | GATC | 2 cut(s) | 370, 493 |
| BstMBI | GATC | 2 cut(s) | 367, 490 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 38, 307, 380 |
| BstSCI | CCNGG | 1 cut(s) | 419 |
| BstSLI | GKGCMC | 2 cut(s) | 34, 267 |
| BstUI | CGCG | 1 cut(s) | 404 |
| BstV2I | GAAGAC | 1 cut(s) | 284 |
| BstX2I | RGATCY | 1 cut(s) | 367 |
| BstYI | RGATCY | 1 cut(s) | 367 |
| BsuRI | GGCC | 2 cut(s) | 401, 419 |
| BtgZI | GCGATG | 1 cut(s) | 419 |
| BtsCI | GGATG | 1 cut(s) | 398 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 303 |
| Cfr10I | RCCGGY | 2 cut(s) | 37, 62 |
| Cfr13I | GGNCC | 1 cut(s) | 417 |
| CviAII | CATG | 1 cut(s) | 239 |
| CviJI | RGCY | 7 cut(s) | 8, 37, 115, 220, 310, 401, 419 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 37, 115, 220, 310, 401, 419 |
| DdeI | CTNAG | 3 cut(s) | 183, 282, 294 |
| DpnI | GATC | 2 cut(s) | 369, 492 |
| DpnII | GATC | 2 cut(s) | 367, 490 |
| Eam1104I | CTCTTC | 2 cut(s) | 65, 321 |
| EarI | CTCTTC | 2 cut(s) | 65, 321 |
| EciI | GGCGGA | 1 cut(s) | 320 |
| Eco88I | CYCGRG | 1 cut(s) | 266 |
| FaeI | CATG | 1 cut(s) | 242 |
| FaiI | YATR | 3 cut(s) | 159, 240, 386 |
| FatI | CATG | 1 cut(s) | 238 |
| Fnu4HI | GCNGC | 3 cut(s) | 402, 436, 439 |
| FokI | GGATG | 1 cut(s) | 405 |
| Fsp4HI | GCNGC | 3 cut(s) | 402, 436, 439 |
| GluI | GCNGC | 3 cut(s) | 402, 436, 439 |
| HaeIII | GGCC | 2 cut(s) | 401, 419 |
| HapII | CCGG | 4 cut(s) | 38, 63, 371, 420 |
| Hin1II | CATG | 1 cut(s) | 242 |
| HinfI | GANTC | 4 cut(s) | 179, 287, 461, 497 |
| HpaII | CCGG | 4 cut(s) | 38, 63, 371, 420 |
| HphI | GGTGA | 1 cut(s) | 328 |
| Hpy188I | TCNGA | 5 cut(s) | 57, 184, 209, 484, 502 |
| Hpy188III | TCNNGA | 1 cut(s) | 494 |
| HpyAV | CCTTC | 3 cut(s) | 187, 391, 467 |
| HpyCH4V | TGCA | 4 cut(s) | 137, 157, 301, 347 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 38, 307, 380 |
| HpyF3I | CTNAG | 3 cut(s) | 183, 282, 294 |
| Hsp92II | CATG | 1 cut(s) | 242 |
| KroI | GCCGGC | 1 cut(s) | 37 |
| KroNI | GCCGGC | 1 cut(s) | 39 |
| Kzo9I | GATC | 2 cut(s) | 367, 490 |
| LmnI | GCTCC | 1 cut(s) | 307 |
| MaeIII | GTNAC | 2 cut(s) | 424, 458 |
| MalI | GATC | 2 cut(s) | 369, 492 |
| MboI | GATC | 2 cut(s) | 367, 490 |
| MboII | GAAGA | 5 cut(s) | 82, 286, 289, 338, 371 |
| MflI | RGATCY | 1 cut(s) | 367 |
| MhlI | GDGCHC | 2 cut(s) | 34, 267 |
| MluCI | AATT | 6 cut(s) | 119, 129, 211, 225, 233, 465 |
| MlyI | GAGTC | 1 cut(s) | 455 |
| MmeI | TCCRAC | 1 cut(s) | 180 |
| MroNI | GCCGGC | 1 cut(s) | 37 |
| MseI | TTAA | 1 cut(s) | 354 |
| MspI | CCGG | 4 cut(s) | 38, 63, 371, 420 |
| MspR9I | CCNGG | 1 cut(s) | 421 |
| Mva1269I | GAATGC | 1 cut(s) | 349 |
| MvnI | CGCG | 1 cut(s) | 404 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 38, 307, 380 |
| NaeI | GCCGGC | 1 cut(s) | 39 |
| NciI | CCSGG | 1 cut(s) | 421 |
| NdeII | GATC | 2 cut(s) | 367, 490 |
| NgoMIV | GCCGGC | 1 cut(s) | 37 |
| NlaIII | CATG | 1 cut(s) | 242 |
| NlaIV | GGNNCC | 4 cut(s) | 264, 309, 369, 418 |
| NmuCI | GTSAC | 1 cut(s) | 458 |
| PctI | GAATGC | 1 cut(s) | 349 |
| PdiI | GCCGGC | 1 cut(s) | 39 |
| PfeI | GAWTC | 3 cut(s) | 179, 287, 497 |
| PkrI | GCNGC | 3 cut(s) | 403, 437, 440 |
| PleI | GAGTC | 1 cut(s) | 455 |
| PpsI | GAGTC | 1 cut(s) | 455 |
| PspN4I | GGNNCC | 4 cut(s) | 264, 309, 369, 418 |
| PspPI | GGNCC | 1 cut(s) | 417 |
| PsuI | RGATCY | 1 cut(s) | 367 |
| SaqAI | TTAA | 1 cut(s) | 354 |
| SatI | GCNGC | 3 cut(s) | 402, 436, 439 |
| Sau3AI | GATC | 2 cut(s) | 367, 490 |
| Sau96I | GGNCC | 1 cut(s) | 417 |
| SchI | GAGTC | 1 cut(s) | 455 |
| ScrFI | CCNGG | 1 cut(s) | 421 |
| SduI | GDGCHC | 2 cut(s) | 34, 267 |
| SetI | ASST | 4 cut(s) | 264, 300, 333, 453 |
| Sse9I | AATT | 6 cut(s) | 119, 129, 211, 225, 233, 465 |
| SsiI | CCGC | 4 cut(s) | 305, 402, 435, 438 |
| StyD4I | CCNGG | 1 cut(s) | 419 |
| TasI | AATT | 6 cut(s) | 119, 129, 211, 225, 233, 465 |
| TauI | GCSGC | 3 cut(s) | 404, 438, 441 |
| TfiI | GAWTC | 3 cut(s) | 179, 287, 497 |
| Tru1I | TTAA | 1 cut(s) | 354 |
| Tru9I | TTAA | 1 cut(s) | 354 |
| TseFI | GTSAC | 1 cut(s) | 458 |
| Tsp45I | GTSAC | 1 cut(s) | 458 |
| TspGWI | ACGGA | 1 cut(s) | 37 |